Query         003492
Match_columns 816
No_of_seqs    392 out of 3416
Neff          6.7 
Searched_HMMs 13730
Date          Tue Mar 26 21:30:11 2013
Command       hhsearch -i /local_scratch/syshi/lefta3m2/003492.a3m -d /local_scratch/syshi/scop70.hhm -v 0 -o /local_scratch/syshi/H2_122-125//hhsearch_scop/003492hhsearch_scop 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1rzua_ c.87.1.8 (A:) Glycogen 100.0       0       0  340.9  27.6  435  279-774     1-474 (477)
  2 d2bisa1 c.87.1.8 (A:1-437) Gly 100.0 5.6E-45       0  323.8  36.7  406  279-774     1-427 (437)
  3 d2iw1a1 c.87.1.8 (A:2-371) Lip 100.0 4.5E-40 3.2E-44  289.9  27.2  363  281-773     2-368 (370)
  4 d1uqta_ c.87.1.6 (A:) Trehalos 100.0 2.1E-27 1.5E-31  203.0  32.8  327  391-774   107-452 (456)
  5 d2bfwa1 c.87.1.8 (A:218-413) G  99.9   1E-24 7.6E-29  184.5  21.6  188  527-752     1-194 (196)
  6 d2f9fa1 c.87.1.8 (A:2-167) Fir  99.9 1.8E-21 1.3E-25  162.2  15.4  154  572-752    12-165 (166)
  7 d1pn3a_ c.87.1.5 (A:) TDP-epi-  99.5 6.9E-11 5.1E-15   89.6  24.9   80  638-729   267-356 (391)
  8 d1f0ka_ c.87.1.2 (A:) Peptidog  99.4 8.2E-10   6E-14   82.3  26.1  339  279-774     1-350 (351)
  9 d1rrva_ c.87.1.5 (A:) TDP-vanc  99.3 2.2E-10 1.6E-14   86.2  19.4  134  570-741   236-375 (401)
 10 d1iira_ c.87.1.5 (A:) UDP-gluc  99.3 1.3E-08 9.8E-13   73.9  24.7  110  638-771   282-397 (401)
 11 d1l5wa_ c.87.1.4 (A:) Maltodex  99.2 7.3E-09 5.3E-13   75.7  21.9  282  407-715   299-678 (796)
 12 d2gj4a1 c.87.1.4 (A:12-835) Gl  99.2 1.7E-08 1.2E-12   73.3  22.2  284  407-715   320-702 (824)
 13 d2acva1 c.87.1.10 (A:3-463) Tr  98.7 1.2E-05 8.9E-10   53.6  25.6   97  641-751   330-443 (461)
 14 d2c1xa1 c.87.1.10 (A:7-456) UD  98.6 2.6E-05 1.9E-09   51.4  24.5   86  640-739   318-410 (450)
 15 d1ygpa_ c.87.1.4 (A:) Glycogen  98.5 4.5E-05 3.3E-09   49.7  23.8  284  407-714   356-757 (876)
 16 d1v4va_ c.87.1.3 (A:) UDP-N-ac  98.5 5.9E-05 4.3E-09   48.9  27.7  271  405-773    86-359 (373)
 17 d2pq6a1 c.87.1.10 (A:8-480) (I  98.4 6.5E-05 4.7E-09   48.6  23.9   95  640-749   345-445 (473)
 18 d1f6da_ c.87.1.3 (A:) UDP-N-ac  98.1  0.0003 2.2E-08   44.1  19.2  259  407-741    86-348 (376)
 19 d1o6ca_ c.87.1.3 (A:) UDP-N-ac  98.1 0.00041   3E-08   43.2  23.1  280  396-773    80-363 (377)
 20 d2vcha1 c.87.1.10 (A:6-476) Hy  97.4  0.0044 3.2E-07   36.1  27.0   85  639-737   332-426 (471)
 21 d1pswa_ c.87.1.7 (A:) ADP-hept  94.5    0.12 8.7E-06   26.2  15.2  104  569-696   177-287 (348)
 22 d1uana_ c.134.1.1 (A:) Hypothe  73.0       2 0.00014   17.9   9.2   98  278-417     1-105 (227)
 23 d1udca_ c.2.1.2 (A:) Uridine d  34.7     8.5 0.00062   13.5   4.6   33  279-340     1-33  (338)
 24 d2blna2 c.65.1.1 (A:1-203) Pol  31.6     9.5 0.00069   13.2   5.6   19  318-339    14-32  (203)

No 1  
>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]}
Probab=100.00  E-value=0  Score=340.90  Aligned_cols=435  Identities=15%  Similarity=0.146  Sum_probs=268.8

Q ss_pred             CEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCEEEECCCCCCCCCCCCCCCEEE--
Q ss_conf             259998556676654568998856312453888999999999999988995555233996246998888667630121--
Q 003492          279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERV--  356 (816)
Q Consensus       279 ~rI~iis~h~~~~~~~~lG~p~tGG~~vyvld~~raL~~eLa~~L~~~G~~V~~~i~IiT~~~p~~~~~~~~~~~e~v--  356 (816)
                      |||++||.-.+|-       -.+||+..++.        .|+++|+++||+|+    |+|..++.-... .....+..  
T Consensus         1 M~i~~v~~e~~P~-------~~~GGl~~vv~--------~La~~L~~~Gh~V~----Vi~P~y~~~~~~-~~~~~~~~~~   60 (477)
T d1rzua_           1 MNVLSVSSEIYPL-------IKTGGLADVVG--------ALPIALEAHGVRTR----TLIPGYPAVKAA-VTDPVKCFEF   60 (477)
T ss_dssp             CEEEEECSCBTTT-------BCSSHHHHHHH--------HHHHHHHTTTCEEE----EEEECCHHHHHH-CCSCEEEEEE
T ss_pred             CEEEEEEEEEECC-------CCCCCHHHHHH--------HHHHHHHHCCCEEE----EEECCCCCHHHH-CCCCEEEEEE
T ss_conf             9899997722063-------32676899999--------99999997699699----996698534465-2566589997


Q ss_pred             C--CCCCEEEEEECCCC---------------CCCCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHH-CCCCEEEEECCCC
Q ss_conf             4--87756999806887---------------6643211244-46642339999999999999880-9996199986999
Q 003492          357 S--GTEHTHILRVPFRS---------------EKGILRQWIS-RFDVWPYLETFTEDVGSEITAEL-QGFPDFIIGNYSD  417 (816)
Q Consensus       357 ~--~~~~v~I~rvp~~~---------------~~~~~~~~is-r~~i~p~l~~f~~~~~~~i~~~l-~~kPDIIh~h~~~  417 (816)
                      .  ....+.+.+++...               ...+...+.. ..+.+.....+...+.+.+.... ..+|||||+|++.
T Consensus        61 ~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pDIvH~h~~~  140 (477)
T d1rzua_          61 TDLLGEKADLLEVQHERLDLLILDAPAYYERSGGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVLPGWRPDMVHAHDWQ  140 (477)
T ss_dssp             SCSSSCCEEEEEEEETTEEEEEEECHHHHCSSSCSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTCSSSCCCSEEEEEHHH
T ss_pred             ECCCCCEEEEEEEEECCEEEEEECCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHH
T ss_conf             14678547899999899159995582430467873557666566521889999998877665302568888879933606


Q ss_pred             CHHHHHHHH--HHCCCCEEEEECCCCCCCCCCCHHHHHHHHH-------HHHCHHHHHHHHHHHHHCCEEEECCHHHHHH
Q ss_conf             169999999--9839949999628985669997045643210-------0000002228899974078999339988841
Q 003492          418 GNLVASLLA--YKMGITQCTIAHALEKTKYPDSDIYWKKFDE-------KYHFSCQFTADLIAMNNADFIITSTYQEIAG  488 (816)
Q Consensus       418 ~~lva~lla--~~lgip~v~t~H~l~~~k~~~~~~~~~~~~~-------~y~f~~~~~ae~~al~~aD~IIt~S~~~i~~  488 (816)
                      +.+.+..+.  +..++|.|.|.|++........+........       ...+..........+..+|.++++|......
T Consensus       141 ~~l~~~~~~~~~~~~ip~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~~~~vs~~~~~~  220 (477)
T d1rzua_         141 AAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAEE  220 (477)
T ss_dssp             HTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHHCSEEEESCHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHH
T ss_conf             77889999985478988899983244234678889988621144406544343205689998877644421311999999


Q ss_pred             HCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCC
Q ss_conf             02444533444345555410111278888994899149976888899826899886420230000169665422247777
Q 003492          489 TKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLS  568 (816)
Q Consensus       489 ~k~~~~qy~~~~~f~~p~l~~~~~gi~~~~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~  568 (816)
                      ........      ......    ..  ...++.+|+||+|.+.|.|.....-..............+........+. .
T Consensus       221 ~~~~~~~~------~~~~~~----~~--~~~~~~vi~ngv~~~~~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~  287 (477)
T d1rzua_         221 ILTAEFGM------GLEGVI----GS--RAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRI-D  287 (477)
T ss_dssp             TTSHHHHT------TCHHHH----HT--TGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHTC-C
T ss_pred             HHHHHCCC------CHHHHH----HH--CCCCEEEEECCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC-C
T ss_conf             99875475------366566----65--15647999789340120566453333331045677766638998874144-6


Q ss_pred             CCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECC
Q ss_conf             99996999990257778978999999982235998299999464799887535779999999999998499995899025
Q 003492          569 DRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAA  648 (816)
Q Consensus       569 ~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~~~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~  648 (816)
                      ++++++|+++||+++.||++.|++|+.++.+.  +.+|+++|.|+.          ....++.+....  +.+++.+.+ 
T Consensus       288 ~~~~~~i~~vgrl~~~KG~~~Ll~a~~~~~~~--~~~l~~~G~G~~----------~~~~~~~~~~~~--~~~~v~~~~-  352 (477)
T d1rzua_         288 DDGSPLFCVISRLTWQKGIDLMAEAVDEIVSL--GGRLVVLGAGDV----------ALEGALLAAASR--HHGRVGVAI-  352 (477)
T ss_dssp             CSSSCEEEEESCBSTTTTHHHHHTTHHHHHHT--TCEEEEEECBCH----------HHHHHHHHHHHH--TTTTEEEEE-
T ss_pred             CCCCCEEEEEEEEEECCCCHHHHHHHHHHHHH--CCEEEEEECCCC----------HHHHHHHHHHHH--CCCEEEEEC-
T ss_conf             67863899985002158837999999987865--983999936774----------577899998763--587278971-


Q ss_pred             CCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCCCCCCCCC---------EEEEECCCCHH
Q ss_conf             567688489999997106399977898988389999999199689838666200002488---------09998999999
Q 003492          649 QTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGA---------SGFHIDPYHPD  719 (816)
Q Consensus       649 ~~~~v~~~el~~~la~aadifV~PS~~EgFGltvlEAMA~GlPVIAT~~gG~~EiI~dg~---------~G~li~p~d~e  719 (816)
                         ..+..+...+++ ++|+||.||.+|+||++++|||+||+|||+|+.||++|+|.|+.         +|+++++.|++
T Consensus       353 ---~~~~~~~~~~~~-~aD~~v~PS~~E~fglv~lEAma~G~PvVas~~GG~~E~v~d~~~~~~~~~~~~G~l~~~~d~~  428 (477)
T d1rzua_         353 ---GYNEPLSHLMQA-GCDAIIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVTLD  428 (477)
T ss_dssp             ---SCCHHHHHHHHH-HCSEEEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSCSHH
T ss_pred             ---CCCHHHHHHHHH-HCCCCCCCCCCCCCCHHHHHHHHCCCCEEECCCCCCCCEEECCCCCCCCCCCCCEEEECCCCHH
T ss_conf             ---547057999998-3851348865357888999999839989990799974055248755334678744896999999


Q ss_pred             HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             9999999998740079999999999999999840226899999999999999998
Q 003492          720 QAAELMADFFGKCKENPSHWKKISDGGLKRIYERIIICRYTWKIYSERLMTLAGV  774 (816)
Q Consensus       720 ~lAe~I~~~l~~l~~dp~~~~~ls~~ar~~v~e~~~~~~ysw~~~a~rll~ly~~  774 (816)
                      +++++|.++++ +.+||+.|++|++++.   .+     +|||+.++++++++|+.
T Consensus       429 ~la~ai~~~l~-~~~~~~~~~~~~~~a~---~~-----~fsw~~~a~~~~~lY~~  474 (477)
T d1rzua_         429 GLKQAIRRTVR-YYHDPKLWTQMQKLGM---KS-----DVSWEKSAGLYAALYSQ  474 (477)
T ss_dssp             HHHHHHHHHHH-HHTCHHHHHHHHHHHH---TC-----CCBHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHH-HHCCHHHHHHHHHHHH---HH-----HCCHHHHHHHHHHHHHH
T ss_conf             99999999986-0079999999999999---85-----18999999999999999


No 2  
>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}
Probab=100.00  E-value=5.6e-45  Score=323.76  Aligned_cols=406  Identities=16%  Similarity=0.156  Sum_probs=274.8

Q ss_pred             CEEEEECCCCCCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCEEEECCCCCCCCCCCC------C
Q ss_conf             2599985566766545689988-56312453888999999999999988995555233996246998888667------6
Q 003492          279 FNVVILSPHGYFGQANVLGLPD-TGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCN------Q  351 (816)
Q Consensus       279 ~rI~iis~h~~~~~~~~lG~p~-tGG~~vyvld~~raL~~eLa~~L~~~G~~V~~~i~IiT~~~p~~~~~~~~------~  351 (816)
                      |||+++|..+.         |. +||...|+.        .|+++|+++||+|+    |+|..++........      .
T Consensus         1 MkIl~~~~~~p---------P~~~GG~~~~~~--------~La~~L~~~Gh~V~----Vvtp~~~~~~~~~~~~~~~~~~   59 (437)
T d2bisa1           1 MKVLLLGFEFL---------PVKVGGLAEALT--------AISEALASLGHEVL----VFTPSHGRFQGEEIGKIRVFGE   59 (437)
T ss_dssp             CEEEEECSCCT---------TCCSSSHHHHHH--------HHHHHHHHTTCEEE----EEEECTTSSCCEEEEEEECSSS
T ss_pred             CEEEEECCCCC---------CCCCCCHHHHHH--------HHHHHHHHCCCEEE----EEECCCCCCCHHHCCCEEECCC
T ss_conf             98799877458---------845587999999--------99999997699899----9905898655444154022154


Q ss_pred             CC---EEECCCCCEEEEEECCCCCCC---CCCCCCCCCCCHHHHHHHHHHHHHHHHHHH--CCCCEEEEECCCCCHHHHH
Q ss_conf             30---121487756999806887664---321124446642339999999999999880--9996199986999169999
Q 003492          352 RL---ERVSGTEHTHILRVPFRSEKG---ILRQWISRFDVWPYLETFTEDVGSEITAEL--QGFPDFIIGNYSDGNLVAS  423 (816)
Q Consensus       352 ~~---e~v~~~~~v~I~rvp~~~~~~---~~~~~isr~~i~p~l~~f~~~~~~~i~~~l--~~kPDIIh~h~~~~~lva~  423 (816)
                      ..   .......++.+.+++......   +.+.|   ...+.....|.......+....  ...||+||+|++..++++.
T Consensus        60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~pDiIh~~~~~~~~~~~  136 (437)
T d2bisa1          60 EVQVKVSYEERGNLRIYRIGGGLLDSEDVYGPGW---DGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGA  136 (437)
T ss_dssp             EEEEEEEEEEETTEEEEEEESSGGGCSCTTCSHH---HHHHHHHHHHHHHHHHHHHHHTTSSCCCSEEEEETGGGHHHHH
T ss_pred             CCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCH---HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHH
T ss_conf             4201123322588179961754345411255311---4689999998999999899998408999789989704666765


Q ss_pred             HHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCEEEECCHHHHHHHCCCCCCCCCCCCCC
Q ss_conf             99998399499996289856699970456432100000002228899974078999339988841024445334443455
Q 003492          424 LLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFT  503 (816)
Q Consensus       424 lla~~lgip~v~t~H~l~~~k~~~~~~~~~~~~~~y~f~~~~~ae~~al~~aD~IIt~S~~~i~~~k~~~~qy~~~~~f~  503 (816)
                      ++++..++|.+.+.|+......+........ ............+......+|.+++.+..........   +       
T Consensus       137 ~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~---~-------  205 (437)
T d2bisa1         137 LIKKYFKIPAVFTIHRLNKSKLPAFYFHEAG-LSELAPYPDIDPEHTGGYIADIVTTVSRGYLIDEWGF---F-------  205 (437)
T ss_dssp             HHHHHHCCCEEEEESSCCCCCEEHHHHHHTT-CGGGCCSSEECHHHHHHHHSSEEEESCHHHHHHTHHH---H-------
T ss_pred             HHHCCCCCCEEEEEEECCCCCCCHHHHHHCC-CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH---H-------
T ss_conf             4301346762589962144555123321012-0134567788999888876522111102456666665---1-------


Q ss_pred             CCCCEEEECCCCCCCCCEEEECCCCCCCCCCCCCH---HHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCEEEEEEC
Q ss_conf             55410111278888994899149976888899826---899886420230000169665422247777999969999902
Q 003492          504 LPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSE---KQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMAR  580 (816)
Q Consensus       504 ~p~l~~~~~gi~~~~~ki~VIpnGVD~~~f~p~~~---~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGR  580 (816)
                                 ..+..|+.++|||+|.+.|.+...   ...+...+              ...++.   .++++++++||
T Consensus       206 -----------~~~~~ki~vi~~g~d~~~~~~~~~~~~~~~~~~~~--------------~~~~~~---~~~~~i~~~G~  257 (437)
T d2bisa1         206 -----------RNFEGKITYVFNGIDCSFWNESYLTGSRDERKKSL--------------LSKFGM---DEGVTFMFIGR  257 (437)
T ss_dssp             -----------GGGTTTEEECCCCCCTTTSCGGGCCSCHHHHHHHH--------------HHHTTC---CSCEEEEEESC
T ss_pred             -----------CCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHH--------------HHHHHC---CCCCEEEEEEC
T ss_conf             -----------34567518970465443433222201058888765--------------455402---67866987303


Q ss_pred             CCC-CCCHHHHHHHHHHHHCC--CCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHH
Q ss_conf             577-78978999999982235--998299999464799887535779999999999998499995899025567688489
Q 003492          581 LDH-VKNMTGLVECYGKNSQL--RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGE  657 (816)
Q Consensus       581 L~~-~Kgi~~LieA~~~l~~~--~~~~~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~e  657 (816)
                      +.. .||++.+++|+..+...  .++++|+++|.+..          .....++.+...  ....+.+.|    .++.++
T Consensus       258 ~~~~~Kg~~~ll~a~~~~~~~~~~~~~~lvi~G~~~~----------~~~~~~~~~~~~--~~~~~~~~~----~~~~~~  321 (437)
T d2bisa1         258 FDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDP----------ELEGWARSLEEK--HGNVKVITE----MLSREF  321 (437)
T ss_dssp             BCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEECCBCH----------HHHHHHHHHHHT--CTTEEEECS----CCCHHH
T ss_pred             CCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCC----------CCCCCHHHHCCC--CCCCEECCC----CCCHHH
T ss_conf             5665125899986410233233333211453102233----------332100221023--210000234----576888


Q ss_pred             HHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCHH
Q ss_conf             99999710639997789898838999999919968983866620000248809998999999999999999874007999
Q 003492          658 LYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPS  737 (816)
Q Consensus       658 l~~~la~aadifV~PS~~EgFGltvlEAMA~GlPVIAT~~gG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~l~~dp~  737 (816)
                      +..+++. +|+++.||..|+||++++|||+||+|||+|+.||..|++.+ .+|++++++|+++++++|.++++   .|++
T Consensus       322 ~~~~~~~-adi~v~~s~~e~~~~~~~Eama~G~Pvi~~~~g~~~e~i~~-~~G~~~~~~d~~~la~~i~~ll~---~~~~  396 (437)
T d2bisa1         322 VRELYGS-VDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITN-ETGILVKAGDPGELANAILKALE---LSRS  396 (437)
T ss_dssp             HHHHHTT-CSEEEECCSCCSSCHHHHHHHTTTCEEEEESCTTHHHHCCT-TTCEEECTTCHHHHHHHHHHHHT---TTTS
T ss_pred             HHHHHHH-HCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCHHHEEC-CCEEEECCCCHHHHHHHHHHHHH---CCHH
T ss_conf             9998764-22354446555642689999987998999389980773778-95899779999999999999983---7999


Q ss_pred             HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             9999999999999840226899999999999999998
Q 003492          738 HWKKISDGGLKRIYERIIICRYTWKIYSERLMTLAGV  774 (816)
Q Consensus       738 ~~~~ls~~ar~~v~e~~~~~~ysw~~~a~rll~ly~~  774 (816)
                      .+++|++++++.+++      |||+.++++++++|+.
T Consensus       397 ~~~~~~~~~~~~~~~------~s~~~~a~~~~~iY~~  427 (437)
T d2bisa1         397 DLSKFRENCKKRAMS------FSWEKSAERYVKAYTG  427 (437)
T ss_dssp             CTHHHHHHHHHHHHH------SCHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHH------CCHHHHHHHHHHHHHH
T ss_conf             999999999999996------9999999999999999


No 3  
>d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]}
Probab=100.00  E-value=4.5e-40  Score=289.91  Aligned_cols=363  Identities=15%  Similarity=0.225  Sum_probs=247.1

Q ss_pred             EEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCEEEECCCCCCCCCCCCCCCEEECCCC
Q ss_conf             99985566766545689988563124538889999999999999889955552339962469988886676301214877
Q 003492          281 VVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTE  360 (816)
Q Consensus       281 I~iis~h~~~~~~~~lG~p~tGG~~vyvld~~raL~~eLa~~L~~~G~~V~~~i~IiT~~~p~~~~~~~~~~~e~v~~~~  360 (816)
                      |+++..+++         | .||.++++.        +|+++|+++||+|+    |+|+......             .+
T Consensus         2 i~f~~~~y~---------p-~GG~e~~~~--------~la~~L~~~G~~V~----v~~~~~~~~~-------------~~   46 (370)
T d2iw1a1           2 VAFCLYKYF---------P-FGGLQRDFM--------RIASTVAARGHHVR----VYTQSWEGDC-------------PK   46 (370)
T ss_dssp             EEEECSEEC---------T-TCHHHHHHH--------HHHHHHHHTTCCEE----EEESEECSCC-------------CT
T ss_pred             EEEEECCCC---------C-CCCHHHHHH--------HHHHHHHHCCCEEE----EEECCCCCCC-------------CC
T ss_conf             899914889---------9-998999999--------99999997799799----9956787788-------------88


Q ss_pred             CEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEECCC
Q ss_conf             56999806887664321124446642339999999999999880999619998699916999999998399499996289
Q 003492          361 HTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHAL  440 (816)
Q Consensus       361 ~v~I~rvp~~~~~~~~~~~isr~~i~p~l~~f~~~~~~~i~~~l~~kPDIIh~h~~~~~lva~lla~~lgip~v~t~H~l  440 (816)
                      ++.+.++|.....           .......|...+...+..   ..+|+||.+....++.           . ...+..
T Consensus        47 ~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~---~~~d~v~~~~~~~~~~-----------~-~~~~~~  100 (370)
T d2iw1a1          47 AFELIQVPVKSHT-----------NHGRNAEYYAWVQNHLKE---HPADRVVGFNKMPGLD-----------V-YFAADV  100 (370)
T ss_dssp             TCEEEECCCCCSS-----------HHHHHHHHHHHHHHHHHH---SCCSEEEESSCCTTCS-----------E-EECCSC
T ss_pred             CEEEEECCCCCCC-----------CCHHHHHHHHHHHHHHHH---CCCCEEEECCCCCHHH-----------H-HHHHHC
T ss_conf             6389986765544-----------301158899999999986---1655253103672378-----------9-987622


Q ss_pred             CCCCCC--CCHHHHHHHHHHHHCHHHHHHHHHHHHHCCEEEECCHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCC
Q ss_conf             856699--970456432100000002228899974078999339988841024445334443455554101112788889
Q 003492          441 EKTKYP--DSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD  518 (816)
Q Consensus       441 ~~~k~~--~~~~~~~~~~~~y~f~~~~~ae~~al~~aD~IIt~S~~~i~~~k~~~~qy~~~~~f~~p~l~~~~~gi~~~~  518 (816)
                      -.....  .....+ .....++....+.........++.+++.+..........                   .+++  .
T Consensus       101 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~--~  158 (370)
T d2iw1a1         101 CYAEKVAQEKGFLY-RLTSRYRHYAAFERATFEQGKSTKLMMLTDKQIADFQKH-------------------YQTE--P  158 (370)
T ss_dssp             CHHHHHHHHCCHHH-HTSHHHHHHHHHHHHHHSTTCCCEEEESCHHHHHHHHHH-------------------HCCC--G
T ss_pred             CCCEEEEEECCCCC-CCCCHHCHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHH-------------------CCCC--C
T ss_conf             44104663047420-004000006788999974215746998247999999986-------------------0999--6


Q ss_pred             CCEEEECCCCCCCCCCCCCHH-HHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHH
Q ss_conf             948991499768888998268-9988642023000016966542224777799996999990257778978999999982
Q 003492          519 PKFNIVSPGADMDIYFPYSEK-QKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKN  597 (816)
Q Consensus       519 ~ki~VIpnGVD~~~f~p~~~~-~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l  597 (816)
                      .++.++|||+|.+.+.+.... .....                +...|+  ++++++++++||+.+.||++.+++|+.++
T Consensus       159 ~~i~vi~~gv~~~~~~~~~~~~~~~~~----------------r~~~~~--~~~~~~i~~~gr~~~~Kg~~~li~a~~~l  220 (370)
T d2iw1a1         159 ERFQILPPGIYPDRKYSEQIPNSREIY----------------RQKNGI--KEQQNLLLQVGSDFGRKGVDRSIEALASL  220 (370)
T ss_dssp             GGEEECCCCCCGGGSGGGSCTTHHHHH----------------HHHTTC--CTTCEEEEEECSCTTTTTHHHHHHHHHTS
T ss_pred             CEEEEEEEECCCCCCCCCCCHHHHHHH----------------HHCCCC--CCCCEEEEEEECCCCCCCHHHHCCCCCCC
T ss_conf             428999740222211246765666665----------------430488--86636999985145542033320111233


Q ss_pred             HCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCC
Q ss_conf             23599829999946479988753577999999999999849999589902556768848999999710639997789898
Q 003492          598 SQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEA  677 (816)
Q Consensus       598 ~~~~~~~~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadifV~PS~~Eg  677 (816)
                      .+..++..++++|++..            .+.+++++++++..++++|+|.+.      ++..+++. +|++|+||..|+
T Consensus       221 ~~~~~~~~~~ii~g~~~------------~~~~~~~~~~~~~~~~v~~~g~~~------~~~~~~~~-adv~v~ps~~E~  281 (370)
T d2iw1a1         221 PESLRHNTLLFVVGQDK------------PRKFEALAEKLGVRSNVHFFSGRN------DVSELMAA-ADLLLHPAYQEA  281 (370)
T ss_dssp             CHHHHHTEEEEEESSSC------------CHHHHHHHHHHTCGGGEEEESCCS------CHHHHHHH-CSEEEECCSCCS
T ss_pred             CCCCCCCEEEECCCCCC------------CCCCCCCCCCCCCCCCCCCCCCCC------CCCCCCCC-CCCCCCCCCCCC
T ss_conf             23322100000112222------------223222222222222222233233------44422233-334443222234


Q ss_pred             CCHHHHHHHHCCCCEEECCCCCCCCCCCCCCEEEEE-CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             838999999919968983866620000248809998-9999999999999998740079999999999999999840226
Q 003492          678 FGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHI-DPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERIII  756 (816)
Q Consensus       678 FGltvlEAMA~GlPVIAT~~gG~~EiI~dg~~G~li-~p~d~e~lAe~I~~~l~~l~~dp~~~~~ls~~ar~~v~e~~~~  756 (816)
                      ||++++|||+||+|||+|+.||.+|++.++.+|+++ +|+|+++++++|.+++    +|++.+++|+++|++++++    
T Consensus       282 ~~~~~~EAma~G~PvI~s~~~g~~e~i~~~~~G~l~~~~~d~~~la~~i~~ll----~d~~~~~~~~~~ar~~~~~----  353 (370)
T d2iw1a1         282 AGIVLLEAITAGLPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKAL----TQSPLRMAWAENARHYADT----  353 (370)
T ss_dssp             SCHHHHHHHHHTCCEEEETTSTTTHHHHHHTCEEEECSSCCHHHHHHHHHHHH----HCHHHHHHHHHHHHHHHHH----
T ss_pred             CCCEEEECCCCCEEEEEECCCCHHHHHCCCCCEEEECCCCCHHHHHHHHHHHH----CCHHHHHHHHHHHHHHHHH----
T ss_conf             33113321457703999389971888527983699869999999999999997----6999999999999999998----


Q ss_pred             CCCCHHHHHHHHHHHHH
Q ss_conf             89999999999999999
Q 003492          757 CRYTWKIYSERLMTLAG  773 (816)
Q Consensus       757 ~~ysw~~~a~rll~ly~  773 (816)
                        |+|....+++.++|.
T Consensus       354 --~~~~~~~~~~~~ii~  368 (370)
T d2iw1a1         354 --QDLYSLPEKAADIIT  368 (370)
T ss_dssp             --SCCSCHHHHHHHHHH
T ss_pred             --HCHHHHHHHHHHHHH
T ss_conf             --285479999999984


No 4  
>d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]}
Probab=99.97  E-value=2.1e-27  Score=203.01  Aligned_cols=327  Identities=11%  Similarity=0.028  Sum_probs=221.3

Q ss_pred             HHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHC-CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHH
Q ss_conf             999999999998809996199986999169999999983-9949999628985669997045643210000000222889
Q 003492          391 TFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADL  469 (816)
Q Consensus       391 ~f~~~~~~~i~~~l~~kPDIIh~h~~~~~lva~lla~~l-gip~v~t~H~l~~~k~~~~~~~~~~~~~~y~f~~~~~ae~  469 (816)
                      .+....+..+... -..-|+|+.|.....+++..+.+.. ..++++..|..++..    . .+..       .-....-+
T Consensus       107 ~vN~~fA~~l~~~-~~~~d~iwvhDyhl~llp~~lR~~~~~~~i~~flH~pfP~~----~-~fr~-------lp~~~~il  173 (456)
T d1uqta_         107 RVNALLADKLLPL-LQDDDIIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPTP----E-IFNA-------LPTYDTLL  173 (456)
T ss_dssp             HHHHHHHHHHGGG-CCTTCEEEEESGGGTTHHHHHHHTTCCSCEEEECCSCCCCH----H-HHTT-------STTHHHHH
T ss_pred             HHHHHHHHHHHHH-CCCCCEEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCCCH----H-HHCC-------CCCHHHHH
T ss_conf             9999999999872-56898699954525556999998589985899968999985----7-7554-------85069999


Q ss_pred             HHHHHCCEEEECCHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEECCCCCCCCCCCCCHHH--HHHHHHH
Q ss_conf             99740789993399888410244453344434555541011127888899489914997688889982689--9886420
Q 003492          470 IAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQ--KRLTALH  547 (816)
Q Consensus       470 ~al~~aD~IIt~S~~~i~~~k~~~~qy~~~~~f~~p~l~~~~~gi~~~~~ki~VIpnGVD~~~f~p~~~~~--~rl~~~~  547 (816)
                      ..+..+|.|...+........+......... ....+ .....|-   ..++.++|+|+|.+.|.+.....  .....+ 
T Consensus       174 ~~ll~~d~igf~~~~~~~~fl~~~~~ll~~~-~~~~~-~i~~~gr---~v~v~~~p~GID~~~~~~~~~~~~~~~~~~l-  247 (456)
T d1uqta_         174 EQLCDYDLLGFQTENDRLAFLDCLSNLTRVT-TRSAK-SHTAWGK---AFRTEVYPIGIEPKEIAKQAAGPLPPKLAQL-  247 (456)
T ss_dssp             HHHTTSSEEEESSHHHHHHHHHHHHHHSCEE-EETTT-EEEETTE---EEEEEECCCCCCHHHHHHHHHSCCCHHHHHH-
T ss_pred             HHHHCCCCCCCCCHHHHHHHHHHHHHHHCCC-CCCCC-EEEECCC---EEEEEEECCCCCCHHHHHHCCCHHHHHHHHH-
T ss_conf             7763226200358999999999999973861-12687-2995681---5530120676562665431140779999997-


Q ss_pred             CCCHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCC----CEEEEEEECCCCCCCCCCHHH
Q ss_conf             2300001696654222477779999699999025777897899999998223599----829999946479988753577
Q 003492          548 GSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRE----LVNLVVVAGYIDVNKSKDREE  623 (816)
Q Consensus       548 ~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~----~~~LVIVG~g~~~~~~~d~e~  623 (816)
                                      ...  ..++++|+++||+++.||+..+++|+.++.+.+|    .+.|+++|.+..   ....+.
T Consensus       248 ----------------~~~--~~~~~~il~V~Rld~~KGi~~~l~A~~~~l~~~p~~~~~v~lv~~~~~~~---~~~~~~  306 (456)
T d1uqta_         248 ----------------KAE--LKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSR---GDVQAY  306 (456)
T ss_dssp             ----------------HHH--TTTCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCS---TTSHHH
T ss_pred             ----------------HHH--CCCCEEEEEECCCCHHHCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC---CCHHHH
T ss_conf             ----------------775--28985999937874320658999999999875843146189999748753---456889


Q ss_pred             HHHHHHHHHHHHH-------CCCCCCEEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCC-----
Q ss_conf             9999999999998-------4999958990255676884899999971063999778989883899999991996-----
Q 003492          624 IAEIEKMHELMKT-------YKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLP-----  691 (816)
Q Consensus       624 ~~~~~~l~~li~~-------~~L~~~V~flG~~~~~v~~~el~~~la~aadifV~PS~~EgFGltvlEAMA~GlP-----  691 (816)
                      .+...++.+++.+       .+..+.+.+.+    .++..++..+++. ||+++.||..||||++++|||+||+|     
T Consensus       307 ~~~~~ev~~lv~~in~~~~~~~~~~~v~~~~----~~~~~~l~a~~~~-Adv~v~~s~~EG~~lv~~Ea~a~~~p~~~g~  381 (456)
T d1uqta_         307 QDIRHQLENEAGRINGKYGQLGWTPLYYLNQ----HFDRKLLMKIFRY-SDVGLVTPLRDGMNLVAKEYVAAQDPANPGV  381 (456)
T ss_dssp             HHHHHHHHHHHHHHHHHHCBTTBCSEEEECS----CCCHHHHHHHHHH-CSEEEECCSSBSCCHHHHHHHHHSCTTSCCE
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCCEEECCC----CCCHHHHHHHHHH-HCEEECCCCCCCCCCHHHHHHHHCCCCCCCC
T ss_conf             9999999999999876521279875021158----7678887677753-0545258765788839999999089888975


Q ss_pred             EEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
Q ss_conf             89838666200002488099989999999999999998740079999999999999999840226899999999999999
Q 003492          692 TFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERIIICRYTWKIYSERLMTL  771 (816)
Q Consensus       692 VIAT~~gG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~l~~dp~~~~~ls~~ar~~v~e~~~~~~ysw~~~a~rll~l  771 (816)
                      +|+|+.+|+.+.+.+   |++++|.|++++|++|.++++   .+++.+.++.+++++++.+      ||+...++.+++-
T Consensus       382 lIlS~~~G~~~~l~~---g~lVnP~d~~~~A~ai~~aL~---~~~~er~~~~~~~~~~v~~------~~~~~W~~~fl~~  449 (456)
T d1uqta_         382 LVLSQFAGAANELTS---ALIVNPYDRDEVAAALDRALT---MSLAERISRHAEMLDVIVK------NDINHWQECFISD  449 (456)
T ss_dssp             EEEETTBGGGGTCTT---SEEECTTCHHHHHHHHHHHHT---CCHHHHHHHHHHHHHHHHH------TCHHHHHHHHHHH
T ss_pred             EEEECCCCCHHHHCC---EEEECCCCHHHHHHHHHHHHC---CCHHHHHHHHHHHHHHHHH------CCHHHHHHHHHHH
T ss_conf             897289787788597---699895999999999999974---9999999999999899997------8999999999999


Q ss_pred             HHH
Q ss_conf             998
Q 003492          772 AGV  774 (816)
Q Consensus       772 y~~  774 (816)
                      .+.
T Consensus       450 l~~  452 (456)
T d1uqta_         450 LKQ  452 (456)
T ss_dssp             HHH
T ss_pred             HHH
T ss_conf             875


No 5  
>d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}
Probab=99.94  E-value=1e-24  Score=184.47  Aligned_cols=188  Identities=17%  Similarity=0.196  Sum_probs=148.0

Q ss_pred             CCCCCCCCCCCH---HHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCC-CCCCHHHHHHHHHHHHC--C
Q ss_conf             976888899826---89988642023000016966542224777799996999990257-77897899999998223--5
Q 003492          527 GADMDIYFPYSE---KQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLD-HVKNMTGLVECYGKNSQ--L  600 (816)
Q Consensus       527 GVD~~~f~p~~~---~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~-~~Kgi~~LieA~~~l~~--~  600 (816)
                      |||++.|.|...   ...+...+              .+.+|+   +++++|+|+||++ ++||++.+++++..+.+  .
T Consensus         1 gid~~~~~~~~~~~~~~~~~~~~--------------~~~~~l---~~~~~il~~Grl~~~~Kg~~~li~a~~~l~~~~~   63 (196)
T d2bfwa1           1 GIDCSFWNESYLTGSRDERKKSL--------------LSKFGM---DEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKE   63 (196)
T ss_dssp             CCCTTTSSGGGSCSCHHHHHHHH--------------HHHTTC---CSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGG
T ss_pred             CCCHHHCCCCCCCCHHHHHHHHH--------------HHHHCC---CCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCC
T ss_conf             91813308988870168999999--------------999597---9998899976888110499999999886411257


Q ss_pred             CCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCH
Q ss_conf             99829999946479988753577999999999999849999589902556768848999999710639997789898838
Q 003492          601 RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGL  680 (816)
Q Consensus       601 ~~~~~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadifV~PS~~EgFGl  680 (816)
                      .++++|+++|.|..          ........+...+  ...+.+.|    .++.+++..+++. +|++|+||+.|+||+
T Consensus        64 ~~~~~l~i~G~g~~----------~~~~~~~~~~~~~--~~~~~~~~----~~~~~~l~~~~~~-~di~v~ps~~e~~~~  126 (196)
T d2bfwa1          64 FQEMRFIIIGKGDP----------ELEGWARSLEEKH--GNVKVITE----MLSREFVRELYGS-VDFVIIPSYFEPFGL  126 (196)
T ss_dssp             GGGEEEEEECCBCH----------HHHHHHHHHHHHC--TTEEEECS----CCCHHHHHHHHTT-CSEEEECCSCCSSCH
T ss_pred             CCCEEEEEEEECCC----------CHHHHHHHHHHCC--CEEEEEEE----CCCCCCCHHCCCC-CCCCCCCCCCCCCCC
T ss_conf             88818999961355----------2134543322113--11577530----2332110000123-233443222112332


Q ss_pred             HHHHHHHCCCCEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf             999999919968983866620000248809998999999999999999874007999999999999999984
Q 003492          681 TVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYE  752 (816)
Q Consensus       681 tvlEAMA~GlPVIAT~~gG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~l~~dp~~~~~ls~~ar~~v~e  752 (816)
                      +++|||+||+|||+++.|+..|++.+ .+|++++++|+++++++|.+++.   .+++.+.+|+++|++++.+
T Consensus       127 ~~~Eam~~G~pvI~~~~~~~~e~i~~-~~g~~~~~~~~~~l~~~i~~~l~---~~~~~~~~~~~~a~~~a~~  194 (196)
T d2bfwa1         127 VALEAMCLGAIPIASAVGGLRDIITN-ETGILVKAGDPGELANAILKALE---LSRSDLSKFRENCKKRAMS  194 (196)
T ss_dssp             HHHHHHHTTCEEEEESCHHHHHHCCT-TTCEEECTTCHHHHHHHHHHHHH---CCHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHCCCEEEECCCCCCCEEECC-CCEEEECCCCHHHHHHHHHHHHH---CCHHHHHHHHHHHHHHHHH
T ss_conf             20133314860465178853201028-73146789999999999999995---7999999999999999983


No 6  
>d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.87  E-value=1.8e-21  Score=162.21  Aligned_cols=154  Identities=21%  Similarity=0.305  Sum_probs=124.9

Q ss_pred             CCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCC
Q ss_conf             96999990257778978999999982235998299999464799887535779999999999998499995899025567
Q 003492          572 KPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTN  651 (816)
Q Consensus       572 k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~~~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~  651 (816)
                      ...++|+||+.+.||++.+++|+.+++    +.+|+++|.+....         +.+.+.+.+.+.. .++|+|+|    
T Consensus        12 ~~~~l~iGrl~~~K~~~~~i~a~~~l~----~~~l~ivg~~~~~~---------~~~~~~~~~~~~~-~~~v~~~g----   73 (166)
T d2f9fa1          12 GDFWLSVNRIYPEKRIELQLEVFKKLQ----DEKLYIVGWFSKGD---------HAERYARKIMKIA-PDNVKFLG----   73 (166)
T ss_dssp             CSCEEEECCSSGGGTHHHHHHHHHHCT----TSCEEEEBCCCTTS---------THHHHHHHHHHHS-CTTEEEEE----
T ss_pred             CCEEEEEECCCCCCCHHHHHHHHHHHC----CCEEEEEEECCCCC---------CHHHHHHHHCCCC-CCCEEEEE----
T ss_conf             999999923754349999999999833----97499997224454---------2233332202356-67588742----


Q ss_pred             CCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHH
Q ss_conf             68848999999710639997789898838999999919968983866620000248809998999999999999999874
Q 003492          652 RARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGK  731 (816)
Q Consensus       652 ~v~~~el~~~la~aadifV~PS~~EgFGltvlEAMA~GlPVIAT~~gG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~  731 (816)
                      .++..++..++.. +|++|+||..|+||++++|||+||+|+|+++.++..|++.++.+|+++++ |+++++++|.+++  
T Consensus        74 ~~~~~~~~~~~~~-ad~~i~ps~~e~~~~~~~Ea~~~g~pvi~s~~~~~~e~i~~~~~g~~~~~-d~~~~~~~i~~l~--  149 (166)
T d2f9fa1          74 SVSEEELIDLYSR-CKGLLCTAKDEDFGLTPIEAMASGKPVIAVNEGGFKETVINEKTGYLVNA-DVNEIIDAMKKVS--  149 (166)
T ss_dssp             SCCHHHHHHHHHH-CSEEEECCSSCCSCHHHHHHHHTTCCEEEESSHHHHHHCCBTTTEEEECS-CHHHHHHHHHHHH--
T ss_pred             CCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEECCCCCCCCCCC-CHHHHHHHHHHHH--
T ss_conf             1221112222222-22233212211233221101122332205527864033048841246899-9999999999998--


Q ss_pred             HCCCHHHHHHHHHHHHHHHHH
Q ss_conf             007999999999999999984
Q 003492          732 CKENPSHWKKISDGGLKRIYE  752 (816)
Q Consensus       732 l~~dp~~~~~ls~~ar~~v~e  752 (816)
                        +|++   ++++++++++.+
T Consensus       150 --~~~~---~~~~~~~~~a~~  165 (166)
T d2f9fa1         150 --KNPD---KFKKDCFRRAKE  165 (166)
T ss_dssp             --HCTT---TTHHHHHHHHHT
T ss_pred             --HCHH---HHHHHHHHHHHC
T ss_conf             --0999---999999999857


No 7  
>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]}
Probab=99.49  E-value=6.9e-11  Score=89.62  Aligned_cols=80  Identities=15%  Similarity=0.122  Sum_probs=59.7

Q ss_pred             CCCCCEEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCC--------CCCCCCCCCE
Q ss_conf             99995899025567688489999997106399977898988389999999199689838666--------2000024880
Q 003492          638 KLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG--------PAEIIEHGAS  709 (816)
Q Consensus       638 ~L~~~V~flG~~~~~v~~~el~~~la~aadifV~PS~~EgFGltvlEAMA~GlPVIAT~~gG--------~~EiI~dg~~  709 (816)
                      ...+++.+.+    +++..+++   . .+|+||..+    -..|+.|||++|+|+|+....+        .++.+.+...
T Consensus       267 ~~~~~v~i~~----~~p~~~ll---~-~a~~~v~hg----G~~t~~Eal~~G~P~v~~P~~~d~~~eQ~~nA~~l~~~G~  334 (391)
T d1pn3a_         267 DDGADCFVVG----EVNLQELF---G-RVAAAIHHD----SAGTTLLAMRAGIPQIVVRRVVDNVVEQAYHADRVAELGV  334 (391)
T ss_dssp             SCCTTCCEES----SCCHHHHH---T-TSSCEEEES----CHHHHHHHHHHTCCEEEECSSCCBTTBCCHHHHHHHHHTS
T ss_pred             CCCCCEEEEC----CCCHHHHH---H-HCCEEEECC----CHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHCCC
T ss_conf             6889889954----46879998---4-254898527----4379999998288689933556774529999999998798


Q ss_pred             EEEECCCC--HHHHHHHHHHHH
Q ss_conf             99989999--999999999998
Q 003492          710 GFHIDPYH--PDQAAELMADFF  729 (816)
Q Consensus       710 G~li~p~d--~e~lAe~I~~~l  729 (816)
                      |..++..+  +++++++|.+++
T Consensus       335 g~~l~~~~~~~~~l~~~i~~~l  356 (391)
T d1pn3a_         335 GVAVDGPVPTIDSLSAALDTAL  356 (391)
T ss_dssp             EEEECCSSCCHHHHHHHHHHHT
T ss_pred             EEECCCCCCCHHHHHHHHHHHH
T ss_conf             8976857899999999999983


No 8  
>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}
Probab=99.42  E-value=8.2e-10  Score=82.26  Aligned_cols=339  Identities=13%  Similarity=0.056  Sum_probs=173.7

Q ss_pred             CEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCEEEECCCCCCCCCCCCCCCEEECC
Q ss_conf             25999855667665456899885631245388899999999999998899555523399624699888866763012148
Q 003492          279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSG  358 (816)
Q Consensus       279 ~rI~iis~h~~~~~~~~lG~p~tGG~~vyvld~~raL~~eLa~~L~~~G~~V~~~i~IiT~~~p~~~~~~~~~~~e~v~~  358 (816)
                      +||+|.+ -            .|||-+.-..        .|+++|.++||+|.    +++....      +...   +..
T Consensus         1 kkili~~-~------------GtGGHv~~a~--------al~~~L~~~G~eV~----~i~~~~~------~~~~---~~~   46 (351)
T d1f0ka_           1 KRLMVMA-G------------GTGGHVFPGL--------AVAHHLMAQGWQVR----WLGTADR------MEAD---LVP   46 (351)
T ss_dssp             CEEEEEC-C------------SSHHHHHHHH--------HHHHHHHTTTCEEE----EEECTTS------THHH---HGG
T ss_pred             CEEEEEC-C------------CCHHHHHHHH--------HHHHHHHHCCCEEE----EEEECCC------CHHH---CCC
T ss_conf             9799983-8------------8589899999--------99999985899899----9995883------2432---235


Q ss_pred             CCCEEEEEECCCCCCCCCCCCCCCCCCHH-HHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEE
Q ss_conf             77569998068876643211244466423-39999999999999880999619998699916999999998399499996
Q 003492          359 TEHTHILRVPFRSEKGILRQWISRFDVWP-YLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIA  437 (816)
Q Consensus       359 ~~~v~I~rvp~~~~~~~~~~~isr~~i~p-~l~~f~~~~~~~i~~~l~~kPDIIh~h~~~~~lva~lla~~lgip~v~t~  437 (816)
                      ..+..+..++.....+   +++.....++ ............+..   .+||++.+........+...++.+++|.+...
T Consensus        47 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~---~~~~~~~~~~~~~~~~~~~~a~~~~ip~~~~~  120 (351)
T d1f0ka_          47 KHGIEIDFIRISGLRG---KGIKALIAAPLRIFNAWRQARAIMKA---YKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHE  120 (351)
T ss_dssp             GGTCEEEECCCCCCTT---CCHHHHHTCHHHHHHHHHHHHHHHHH---HCCSEEEECSSTTHHHHHHHHHHTTCCEEEEE
T ss_pred             CCCCCEEEEECCCCCC---CCHHHHHHHHHHHHHHHHHHHHHHHC---CCCCEEEECCCCHHHHHHHHHHHCCCCEEECC
T ss_conf             0499579997888677---77799999998877767777887631---34430011032211344545540564346322


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCEEEECCHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCC
Q ss_conf             28985669997045643210000000222889997407899933998884102444533444345555410111278888
Q 003492          438 HALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVF  517 (816)
Q Consensus       438 H~l~~~k~~~~~~~~~~~~~~y~f~~~~~ae~~al~~aD~IIt~S~~~i~~~k~~~~qy~~~~~f~~p~l~~~~~gi~~~  517 (816)
                      ++.....      .                .......++.+.......                                
T Consensus       121 ~~~~~~~------~----------------~~~~~~~~~~~~~~~~~~--------------------------------  146 (351)
T d1f0ka_         121 QNGIAGL------T----------------NKWLAKIATKVMQAFPGA--------------------------------  146 (351)
T ss_dssp             CSSSCCH------H----------------HHHHTTTCSEEEESSTTS--------------------------------
T ss_pred             CCCCCCH------H----------------HHHHHHHCCEEECCCCCC--------------------------------
T ss_conf             2123104------6----------------777654134011023566--------------------------------


Q ss_pred             CCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCEEEEEE-CCCCCCCHHHHHHHHHH
Q ss_conf             99489914997688889982689988642023000016966542224777799996999990-25777897899999998
Q 003492          518 DPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMA-RLDHVKNMTGLVECYGK  596 (816)
Q Consensus       518 ~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vG-RL~~~Kgi~~LieA~~~  596 (816)
                      ......+.+........+......                      ...  ..++..++.+| ......-...+.+.+..
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~--~~~~~~i~~~~gs~g~~~~~~~~~~~~~~  202 (351)
T d1f0ka_         147 FPNAEVVGNPVRTDVLALPLPQQR----------------------LAG--REGPVRVLVVGGSQGARILNQTMPQVAAK  202 (351)
T ss_dssp             SSSCEECCCCCCHHHHTSCCHHHH----------------------HTT--CCSSEEEEEECTTTCCHHHHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCCCHHHHHH----------------------HHC--CCCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf             530038767764310000057765----------------------320--35874313344540134668888876665


Q ss_pred             HHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCC
Q ss_conf             22359982999994647998875357799999999999984999958990255676884899999971063999778989
Q 003492          597 NSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYE  676 (816)
Q Consensus       597 l~~~~~~~~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadifV~PS~~E  676 (816)
                      +..   ....++++....            .......... ....++...++..      ++..+++. +|++|.-    
T Consensus       203 l~~---~~~~i~~~~~~~------------~~~~~~~~~~-~~~~~~~v~~f~~------~~~~lm~~-adl~It~----  255 (351)
T d1f0ka_         203 LGD---SVTIWHQSGKGS------------QQSVEQAYAE-AGQPQHKVTEFID------DMAAAYAW-ADVVVCR----  255 (351)
T ss_dssp             HGG---GEEEEEECCTTC------------HHHHHHHHHH-TTCTTSEEESCCS------CHHHHHHH-CSEEEEC----
T ss_pred             HCC---CCEEEEECCCCC------------HHHHHHHHCC-CCCCCCEEEEEHH------HHHHHHHH-CCHHHCC----
T ss_conf             245---530454213410------------4443343202-3322315554305------58999974-7422205----


Q ss_pred             CCCHHHHHHHHCCCCEEECCCC---C----CCCCCCCCCEEEEECCCC--HHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Q ss_conf             8838999999919968983866---6----200002488099989999--999999999998740079999999999999
Q 003492          677 AFGLTVVEAMTCGLPTFATCHG---G----PAEIIEHGASGFHIDPYH--PDQAAELMADFFGKCKENPSHWKKISDGGL  747 (816)
Q Consensus       677 gFGltvlEAMA~GlPVIAT~~g---G----~~EiI~dg~~G~li~p~d--~e~lAe~I~~~l~~l~~dp~~~~~ls~~ar  747 (816)
                      |-+.|+.||++||+|+|.....   +    .++.+++-..|..++..+  .+.+.++|    ..+  +++.+.+|+++++
T Consensus       256 ~G~~T~~Eal~~g~P~I~iP~~~~~~~Q~~NA~~l~~~G~~~~~~~~~~~~e~l~~~l----~~l--~~~~~~~~~~~~~  329 (351)
T d1f0ka_         256 SGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQLSVDAVANTL----AGW--SRETLLTMAERAR  329 (351)
T ss_dssp             CCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTTSEEECCGGGCCHHHHHHHH----HTC--CHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEECHHHCCHHHHHHHH----HHH--CHHHHHHHHHHHH
T ss_conf             5423778888717854654154677669999999998899899223319999999999----863--9999999999987


Q ss_pred             HHHHHHCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             999840226899999999999999998
Q 003492          748 KRIYERIIICRYTWKIYSERLMTLAGV  774 (816)
Q Consensus       748 ~~v~e~~~~~~ysw~~~a~rll~ly~~  774 (816)
                      +...      ...++.+++.++++.+.
T Consensus       330 ~~~~------~~~a~~i~~~i~~l~~~  350 (351)
T d1f0ka_         330 AASI------PDATERVANEVSRVARA  350 (351)
T ss_dssp             HTCC------TTHHHHHHHHHHHHHTT
T ss_pred             CCCC------CCHHHHHHHHHHHHHHC
T ss_conf             2699------56999999999999842


No 9  
>d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]}
Probab=99.35  E-value=2.2e-10  Score=86.16  Aligned_cols=134  Identities=10%  Similarity=0.001  Sum_probs=82.3

Q ss_pred             CCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCC
Q ss_conf             99969999902577789789999999822359982999994647998875357799999999999984999958990255
Q 003492          570 RSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQ  649 (816)
Q Consensus       570 ~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~~~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~  649 (816)
                      ..+.++++.|...... ...+.+.+.......+...++..|....                    ....+.+++++.+  
T Consensus       236 ~~~~v~~~~gs~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~v~~~~--  292 (401)
T d1rrva_         236 GSPPVHIGFGSSSGRG-IADAAKVAVEAIRAQGRRVILSRGWTEL--------------------VLPDDRDDCFAID--  292 (401)
T ss_dssp             SSCCEEECCTTCCSHH-HHHHHHHHHHHHHHTTCCEEEECTTTTC--------------------CCSCCCTTEEEES--
T ss_pred             CCCEEEEECCCCCCCC-HHHHHHHHHHHHHHCCCEEEEECCCCCC--------------------CCCCCCCCEEEEE--
T ss_conf             7983999878644578-8999999999986269748995054434--------------------5545789889973--


Q ss_pred             CCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCC----CCCCCCCCCEEEEECCCC--HHHHHH
Q ss_conf             67688489999997106399977898988389999999199689838666----200002488099989999--999999
Q 003492          650 TNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG----PAEIIEHGASGFHIDPYH--PDQAAE  723 (816)
Q Consensus       650 ~~~v~~~el~~~la~aadifV~PS~~EgFGltvlEAMA~GlPVIAT~~gG----~~EiI~dg~~G~li~p~d--~e~lAe  723 (816)
                        +++..++.   . .+|+||.    .|...++.||+++|+|+|+....+    ..+.+++...|..++..+  ++.+++
T Consensus       293 --~~p~~~ll---~-~~~~~I~----hgG~~t~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~G~g~~l~~~~~~~~~L~~  362 (401)
T d1rrva_         293 --EVNFQALF---R-RVAAVIH----HGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTPTFESLSA  362 (401)
T ss_dssp             --SCCHHHHG---G-GSSEEEE----CCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEECSSSCCCHHHHHH
T ss_pred             --CCCCHHHH---H-HCCEEEE----CCCCHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCEEECCCCCCCHHHHHH
T ss_conf             --14817776---2-1248886----177248999998399989806612089999999987988975747899999999


Q ss_pred             HHHHHHHHHCCCHHHHHH
Q ss_conf             999998740079999999
Q 003492          724 LMADFFGKCKENPSHWKK  741 (816)
Q Consensus       724 ~I~~~l~~l~~dp~~~~~  741 (816)
                      +|.+++     +|+.++.
T Consensus       363 ai~~vl-----~~~~r~~  375 (401)
T d1rrva_         363 ALTTVL-----APETRAR  375 (401)
T ss_dssp             HHHHHT-----SHHHHHH
T ss_pred             HHHHHH-----CHHHHHH
T ss_conf             999984-----9799999


No 10 
>d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]}
Probab=99.27  E-value=1.3e-08  Score=73.93  Aligned_cols=110  Identities=14%  Similarity=0.027  Sum_probs=70.9

Q ss_pred             CCCCCEEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCC----CCCCCCCCCEEEEE
Q ss_conf             99995899025567688489999997106399977898988389999999199689838666----20000248809998
Q 003492          638 KLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG----PAEIIEHGASGFHI  713 (816)
Q Consensus       638 ~L~~~V~flG~~~~~v~~~el~~~la~aadifV~PS~~EgFGltvlEAMA~GlPVIAT~~gG----~~EiI~dg~~G~li  713 (816)
                      .+.+++++.+    +++..+++   . .+++||.    .|...|+.||+++|+|+|+....+    .++.+++...|..+
T Consensus       282 ~~~~nv~~~~----~~p~~~~l---~-~~~~~V~----hgG~~t~~Eal~~GvP~v~~P~~~DQ~~na~~l~~~G~g~~l  349 (401)
T d1iira_         282 DDGADCFAIG----EVNHQVLF---G-RVAAVIH----HGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAH  349 (401)
T ss_dssp             SCGGGEEECS----SCCHHHHG---G-GSSEEEE----CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEEC
T ss_pred             CCCCCEEEEE----CCCHHHHH---H-HCCEEEE----CCCCHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHCCCEEEC
T ss_conf             5789789970----25879999---5-4589996----377169999998199999806614179999999987988876


Q ss_pred             CCC--CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
Q ss_conf             999--9999999999998740079999999999999999840226899999999999999
Q 003492          714 DPY--HPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERIIICRYTWKIYSERLMTL  771 (816)
Q Consensus       714 ~p~--d~e~lAe~I~~~l~~l~~dp~~~~~ls~~ar~~v~e~~~~~~ysw~~~a~rll~l  771 (816)
                      +..  ++++++++|.+++     +++.+    +++++....   +...+-...++.+++.
T Consensus       350 ~~~~~~~~~l~~ai~~~l-----~~~~~----~~a~~~~~~---~~~~~~~~aa~~i~~~  397 (401)
T d1iira_         350 DGPIPTFDSLSAALATAL-----TPETH----ARATAVAGT---IRTDGAAVAARLLLDA  397 (401)
T ss_dssp             SSSSCCHHHHHHHHHHHT-----SHHHH----HHHHHHHHH---SCSCHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHH-----CHHHH----HHHHHHHHH---HHHCCHHHHHHHHHHH
T ss_conf             847899999999999996-----97999----999999999---8750839999999999


No 11 
>d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]}
Probab=99.23  E-value=7.3e-09  Score=75.74  Aligned_cols=282  Identities=12%  Similarity=-0.003  Sum_probs=170.0

Q ss_pred             CCEEEEECCCCCHHHHHHHHHH---------------CCCCEEEEECCCCCCCCCCCHHH--HHHHHHHHH--------C
Q ss_conf             9619998699916999999998---------------39949999628985669997045--643210000--------0
Q 003492          407 FPDFIIGNYSDGNLVASLLAYK---------------MGITQCTIAHALEKTKYPDSDIY--WKKFDEKYH--------F  461 (816)
Q Consensus       407 kPDIIh~h~~~~~lva~lla~~---------------lgip~v~t~H~l~~~k~~~~~~~--~~~~~~~y~--------f  461 (816)
                      .++++|.|..++++...-+.+.               ..-..++|.|+..+.....-+..  .+.+...+.        |
T Consensus       299 ~~~vihlNEgHpafai~El~R~l~d~~gl~~~~A~e~vr~~~~fTtHTpvpag~e~fp~~li~~~l~~~~~~i~~i~~~f  378 (796)
T d1l5wa_         299 DYEVIQLNDTHPTIAIPELLRVLIDEHQMSWDDAWAITSKTFAYTNHTLMPEALERWDVKLVKGLLPRHMQIINEINTRF  378 (796)
T ss_dssp             HHEEEEEESSTTTTHHHHHHHHHHHHSCCCHHHHHHHHTTTEEEECCCCSGGGSCEEEHHHHHHHCHHHHHHHHHHHHHH
T ss_pred             CHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCEEEEECCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             03546503622777899999999872289899999975251787415786453266279999998388987776765999


Q ss_pred             ----------------------HHHHHHHHHHHHHCCEEEECCHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCC
Q ss_conf             ----------------------0022288999740789993399888410244453344434555541011127888899
Q 003492          462 ----------------------SCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDP  519 (816)
Q Consensus       462 ----------------------~~~~~ae~~al~~aD~IIt~S~~~i~~~k~~~~qy~~~~~f~~p~l~~~~~gi~~~~~  519 (816)
                                            ..++..-..+++.+..+..+|.--.+-+++.+...          .+      +..+.
T Consensus       379 l~~~~~~~~~d~~~~~~~~~~~~~~~~Ma~LAl~~S~~vNGVSklH~ev~~~~~~~~----------~~------~~~p~  442 (796)
T d1l5wa_         379 KTLVEKTWPGDEKVWAKLAVVHDKQVHMANLCVVGGFAVNGVAALHSDLVVKDLFPE----------YH------QLWPN  442 (796)
T ss_dssp             HHHHHHHSTTCHHHHHHHCSEETTEEEHHHHHHHHSSEEEESSHHHHHHHHHTTSHH----------HH------HHCGG
T ss_pred             HHHHHHHCCCCHHHHHHHCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------CC------CCCCC
T ss_conf             999998789958888520221066632699999860466799999999999875331----------25------56876


Q ss_pred             CEEEECCCCCCCCCCCC-CHH-HH-------------------------------HHHHHHCCCHHHCCCCCCCCCCCCC
Q ss_conf             48991499768888998-268-99-------------------------------8864202300001696654222477
Q 003492          520 KFNIVSPGADMDIYFPY-SEK-QK-------------------------------RLTALHGSIEQLLFDPEQNDEHVGT  566 (816)
Q Consensus       520 ki~VIpnGVD~~~f~p~-~~~-~~-------------------------------rl~~~~~~~~~~l~~~~~~~~~~g~  566 (816)
                      +|.-|.|||....+... ... ..                               .+...+...+..+...+  +...|.
T Consensus       443 ~i~~ITNGVh~~~Wl~~~n~~L~~l~~~~ig~~w~~~~~~l~~~~~~~~d~~~~~~l~~~k~~~K~~L~~~i--~~~~g~  520 (796)
T d1l5wa_         443 KFHNVTNGITPRRWIKQCNPALAALLDKSLQKEWANDLDQLINLEKFADDAKFRQQYREIKQANKVRLAEFV--KVRTGI  520 (796)
T ss_dssp             GEEECCCCBCHHHHTTTTCHHHHHHHHHHCSSCCTTCGGGGGGGGGGGGCHHHHHHHHHHHHHHHHHHHHHH--HHHHCC
T ss_pred             CCCCCCCCCCHHHHHHHHCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH--HHHCCC
T ss_conf             643445661577887432789999987645652134778899888636879999999999999999999999--985296


Q ss_pred             CCCCCCCEEEEEECCCCCCCHHHHH----HHHHHHHCC----CCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCC
Q ss_conf             7799996999990257778978999----999982235----99829999946479988753577999999999999849
Q 003492          567 LSDRSKPIVFSMARLDHVKNMTGLV----ECYGKNSQL----RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYK  638 (816)
Q Consensus       567 l~~~~k~iIl~vGRL~~~Kgi~~Li----eA~~~l~~~----~~~~~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~  638 (816)
                      .-+++...++++-|+..+|....++    +.+..++..    ...+++++.|...+    .|....+.++.+.++++..+
T Consensus       521 ~ldp~~LtigfaRRfa~YKR~~L~~~~i~~l~~~l~~~~~~~~~Pvq~IfaGKAhP----~d~~gK~iIk~I~~va~~in  596 (796)
T d1l5wa_         521 EINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAP----GYYLAKNIIFAINKVADVIN  596 (796)
T ss_dssp             CCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCT----TCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCC----CHHHHHHHHHHHHHHHHHHC
T ss_conf             35856514034345444314530353599999998508645778659997488898----31789999999999999861


Q ss_pred             C------CCCEEEECCCCCCCCHHHHHHHHHCCCCEEEECCC--CCCCCHHHHHHHHCCCCEEECCCCCCCCCCCC--CC
Q ss_conf             9------99589902556768848999999710639997789--89883899999991996898386662000024--88
Q 003492          639 L------DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH--GA  708 (816)
Q Consensus       639 L------~~~V~flG~~~~~v~~~el~~~la~aadifV~PS~--~EgFGltvlEAMA~GlPVIAT~~gG~~EiI~d--g~  708 (816)
                      -      ..+|.|+.    -. +-.+.+.+-.++|+-.+.+.  .|+.|.+-+-||..|.+.++|--|...|+.++  ++
T Consensus       597 ~dp~~~~~~kVVFle----nY-dv~lA~~lv~g~DVwln~p~~p~EASGTSgMKaalNG~lnlstlDGw~vE~~~~vg~e  671 (796)
T d1l5wa_         597 NDPLVGDKLKVVFLP----DY-CVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEKVGEE  671 (796)
T ss_dssp             TCTTTGGGEEEEECS----SC-CHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGG
T ss_pred             CCHHHCCCEEEEEEC----CC-CHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHHHHHCCCEEEECCCCHHHHHHHHCCCC
T ss_conf             785543633389807----87-5689998744012654099987345782677999859716604664479888863745


Q ss_pred             EEEEECC
Q ss_conf             0999899
Q 003492          709 SGFHIDP  715 (816)
Q Consensus       709 ~G~li~p  715 (816)
                      |||.|-.
T Consensus       672 N~f~fG~  678 (796)
T d1l5wa_         672 NIFIFGH  678 (796)
T ss_dssp             GSEECSC
T ss_pred             CEEEECC
T ss_conf             3688068


No 12 
>d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=99.19  E-value=1.7e-08  Score=73.25  Aligned_cols=284  Identities=11%  Similarity=0.043  Sum_probs=168.8

Q ss_pred             CCEEEEECCCCCHHHHH-HHHHH---CC-----------CCEEEEECCCCCCCCCCCHHHH--HHHHHHH--------HC
Q ss_conf             96199986999169999-99998---39-----------9499996289856699970456--4321000--------00
Q 003492          407 FPDFIIGNYSDGNLVAS-LLAYK---MG-----------ITQCTIAHALEKTKYPDSDIYW--KKFDEKY--------HF  461 (816)
Q Consensus       407 kPDIIh~h~~~~~lva~-lla~~---lg-----------ip~v~t~H~l~~~k~~~~~~~~--~~~~~~y--------~f  461 (816)
                      .++++|.|..++++... ++...   .|           ..+++|.|+..+.....-+...  +.+...+        +|
T Consensus       320 ~~~vihlNegHpa~ai~ElmR~l~d~~gl~~d~A~e~v~~~~~fTtHTpvpag~E~f~~~l~~~~lpr~~~ii~ei~~~f  399 (824)
T d2gj4a1         320 DKVAIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVLPEALERWPVHLLETLLPRHLQIIYEINQRF  399 (824)
T ss_dssp             HHEEEEEESSTTTTHHHHHHHHHHHTSCCCHHHHHHHHHHHEEEECCCCCGGGSCEEEHHHHHHHCHHHHHHHHHHHHHH
T ss_pred             CCCEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCEEEEEECCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             21132025773174899999999986099999999986401888833686675185079999998587765553667999


Q ss_pred             -------------------------HHHHHHHHHHHHHCCEEEECCHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCC
Q ss_conf             -------------------------0022288999740789993399888410244453344434555541011127888
Q 003492          462 -------------------------SCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDV  516 (816)
Q Consensus       462 -------------------------~~~~~ae~~al~~aD~IIt~S~~~i~~~k~~~~qy~~~~~f~~p~l~~~~~gi~~  516 (816)
                                               ..++..-..+++.+..+-.+|.---+-+++.+..          ..|      +.
T Consensus       400 l~~~~~~~~~d~~~~~~l~ii~e~~~~~~~Ma~Lal~~S~~vNGVSklH~ev~~~~~~~----------~~~------~~  463 (824)
T d2gj4a1         400 LNRVAAAFPGDVDRLRRMSLVEEGAVKRINMAHLCIAGSHAVNGVARIHSEILKKTIFK----------DFY------EL  463 (824)
T ss_dssp             HHHHHHHSTTCHHHHHHHCSEECSSSCEEEHHHHHHHTCSCEEESSHHHHHHHHHTTTH----------HHH------HH
T ss_pred             HHHHHHHCCCCHHHHHHCCCCCCCCCCEEEHHHHHHHHCHHHHHHHHHHHHHHHHHHCC----------CCC------CC
T ss_conf             99999878996888853112113588553599999986426788999999999976435----------656------67


Q ss_pred             CCCCEEEECCCCCCCCCCCC-CHHHHHH-HH-H----HCC---CH---HHCCCC------------------CCCCCCCC
Q ss_conf             89948991499768888998-2689988-64-2----023---00---001696------------------65422247
Q 003492          517 FDPKFNIVSPGADMDIYFPY-SEKQKRL-TA-L----HGS---IE---QLLFDP------------------EQNDEHVG  565 (816)
Q Consensus       517 ~~~ki~VIpnGVD~~~f~p~-~~~~~rl-~~-~----~~~---~~---~~l~~~------------------~~~~~~~g  565 (816)
                      .+.||.-|.|||....+... ...-..+ .+ +    ...   ++   ....++                  .-..+..|
T Consensus       464 ~p~ki~~iTNGV~~rrWl~~~np~L~~l~~~~ig~~w~~d~~~l~~l~~~~~d~~~~~~~~~~k~~~K~~L~~~i~~~~g  543 (824)
T d2gj4a1         464 EPHKFQNKTNGITPRRWLVLCNPGLAEIIAERIGEEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYK  543 (824)
T ss_dssp             CGGGEEECCCCBCTCCCCCCTCHHHHHHHHHHHCSGGGGCGGGGGGGGGGTTCHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCCEECCCCCCCCCCCHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             87240266475157611311697799987754344322598999998873898999999999999828999999999838


Q ss_pred             CCCCCCCCEEEEEECCCCCCCHHH----HHHHHHHHHCC----CCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHC
Q ss_conf             777999969999902577789789----99999982235----9982999994647998875357799999999999984
Q 003492          566 TLSDRSKPIVFSMARLDHVKNMTG----LVECYGKNSQL----RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTY  637 (816)
Q Consensus       566 ~l~~~~k~iIl~vGRL~~~Kgi~~----LieA~~~l~~~----~~~~~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~  637 (816)
                      ..-+++...++++-|+..+|....    ++..+.++++.    ...+++++.|...+    .|......++.+.++++..
T Consensus       544 ~~ldp~~lfd~~arRfheYKRq~Ln~~~i~~ly~rlk~~~~~~~~P~q~IFaGKAhP----~d~~gK~iIk~I~~va~~i  619 (824)
T d2gj4a1         544 VHINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAP----GYHMAKMIIKLITAIGDVV  619 (824)
T ss_dssp             CCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEEEECCCCT----TCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCC----CCHHHHHHHHHHHHHHHHH
T ss_conf             778964110131000023333456676589999876534567888749998078897----6388999999999999987


Q ss_pred             CCC------CCEEEECCCCCCCCHHHHHHHHHCCCCEEEECCC--CCCCCHHHHHHHHCCCCEEECCCCCCCCCCCC--C
Q ss_conf             999------9589902556768848999999710639997789--89883899999991996898386662000024--8
Q 003492          638 KLD------GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH--G  707 (816)
Q Consensus       638 ~L~------~~V~flG~~~~~v~~~el~~~la~aadifV~PS~--~EgFGltvlEAMA~GlPVIAT~~gG~~EiI~d--g  707 (816)
                      +..      .+|.|+.    -. +-.+.+.+-.++|+-.+.|.  .|+.|..-+-||..|.+++.|--|...|+.++  +
T Consensus       620 n~dp~~~~~lkVvFle----nY-~v~lA~~li~g~Dvwln~p~~~~EASGTSgMK~alNGal~lstlDGwnvEi~~~vg~  694 (824)
T d2gj4a1         620 NHDPVVGDRLRVIFLE----NY-RVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGE  694 (824)
T ss_dssp             TTCTTTGGGEEEEEET----TC-CHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCG
T ss_pred             HCCHHHCCCEEEEECC----CC-CHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCEEECCCCCHHHHHHHHCCC
T ss_conf             4181121534488707----87-669999751143441318999734577504589975983563566358999986475


Q ss_pred             CEEEEECC
Q ss_conf             80999899
Q 003492          708 ASGFHIDP  715 (816)
Q Consensus       708 ~~G~li~p  715 (816)
                      .|||.|-.
T Consensus       695 ~N~~~fG~  702 (824)
T d2gj4a1         695 ENFFIFGM  702 (824)
T ss_dssp             GGSEECSC
T ss_pred             CCEEEECC
T ss_conf             66798179


No 13 
>d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]}
Probab=98.72  E-value=1.2e-05  Score=53.63  Aligned_cols=97  Identities=15%  Similarity=0.118  Sum_probs=58.8

Q ss_pred             CCEEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCC----CCCCCCC-CCCCEEEEECC
Q ss_conf             958990255676884899999971063999778989883899999991996898386----6620000-24880999899
Q 003492          641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCH----GGPAEII-EHGASGFHIDP  715 (816)
Q Consensus       641 ~~V~flG~~~~~v~~~el~~~la~aadifV~PS~~EgFGltvlEAMA~GlPVIAT~~----gG~~EiI-~dg~~G~li~p  715 (816)
                      +++.+..    +.+...+. ... .+++||.-    |-..++.||+.+|+|+|+.-.    ...+.-+ +....|..++.
T Consensus       330 ~n~~v~~----~~pq~~~l-~~p-~~~~fItH----GG~gs~~eAl~~GVP~l~~P~~~DQ~~nA~rlve~~G~G~~l~~  399 (461)
T d2acva1         330 GKGMICG----WAPQVEVL-AHK-AIGGFVSH----CGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRV  399 (461)
T ss_dssp             CSEEEES----SCCHHHHH-HST-TEEEEEEC----CCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCS
T ss_pred             CCEEEEE----CCCHHHHH-HCC-CCCEEEEC----CCCCHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHCCEEEEEC
T ss_conf             8738985----18778888-556-57779833----88448999998599989677600028899999998493678415


Q ss_pred             C--------CHHHHHHHHHHHHHHHCCC-HHHHHH---HHHHHHHHHH
Q ss_conf             9--------9999999999998740079-999999---9999999998
Q 003492          716 Y--------HPDQAAELMADFFGKCKEN-PSHWKK---ISDGGLKRIY  751 (816)
Q Consensus       716 ~--------d~e~lAe~I~~~l~~l~~d-p~~~~~---ls~~ar~~v~  751 (816)
                      .        +.++++++|.+++    ++ +.++++   +++.+++-++
T Consensus       400 ~~~~~~~~~t~~~l~~a~~~vl----~~d~~~r~~a~~l~~~~r~a~~  443 (461)
T d2acva1         400 DYRKGSDVVAAEEIEKGLKDLM----DKDSIVHKKVQEMKEMSRNAVV  443 (461)
T ss_dssp             SCCTTCCCCCHHHHHHHHHHHT----CTTCTHHHHHHHHHHHHHHHTS
T ss_pred             CCCCCCCCCCHHHHHHHHHHHH----HCCHHHHHHHHHHHHHHHHHHC
T ss_conf             3113678547999999999996----0889999999999999999842


No 14 
>d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]}
Probab=98.60  E-value=2.6e-05  Score=51.36  Aligned_cols=86  Identities=16%  Similarity=0.130  Sum_probs=58.5

Q ss_pred             CCCEEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCC----CCCCCC-CCCEEEEEC
Q ss_conf             995899025567688489999997106399977898988389999999199689838666----200002-488099989
Q 003492          640 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG----PAEIIE-HGASGFHID  714 (816)
Q Consensus       640 ~~~V~flG~~~~~v~~~el~~~la~aadifV~PS~~EgFGltvlEAMA~GlPVIAT~~gG----~~EiI~-dg~~G~li~  714 (816)
                      .+++....    +++..++.. .. .+++||.-    |-..++.||+.+|+|+|+....+    .+.-+. ....|..++
T Consensus       318 ~~nv~~~~----~~pq~~lL~-hp-~~~~fItH----GG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~  387 (450)
T d2c1xa1         318 RGYGMVVP----WAPQAEVLA-HE-AVGAFVTH----CGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIE  387 (450)
T ss_dssp             TTTEEEES----CCCHHHHHT-ST-TEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECG
T ss_pred             CCCCCCCC----CCCHHHHHC-CC-CEEEEECC----CCCCHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHCCCEEEEC
T ss_conf             35401554----678376652-67-41699706----8830799999859998963540000899999999709089803


Q ss_pred             CC--CHHHHHHHHHHHHHHHCCCHHHH
Q ss_conf             99--99999999999987400799999
Q 003492          715 PY--HPDQAAELMADFFGKCKENPSHW  739 (816)
Q Consensus       715 p~--d~e~lAe~I~~~l~~l~~dp~~~  739 (816)
                      ..  +.+++.++|.+++    +|+.++
T Consensus       388 ~~~~t~~~l~~ai~~vL----~d~~y~  410 (450)
T d2c1xa1         388 GGVFTKSGLMSCFDQIL----SQEKGK  410 (450)
T ss_dssp             GGSCCHHHHHHHHHHHH----HSHHHH
T ss_pred             CCCCCHHHHHHHHHHHH----CCCHHH
T ss_conf             89838999999999996----194799


No 15 
>d1ygpa_ c.87.1.4 (A:) Glycogen phosphorylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.51  E-value=4.5e-05  Score=49.72  Aligned_cols=284  Identities=12%  Similarity=-0.028  Sum_probs=157.8

Q ss_pred             CCEEEEECCCCCHHHHHHHHH-H---CC-----------CCEEEEECCCCCCCCCCCHHHH--HHHHHHH--------H-
Q ss_conf             961999869991699999999-8---39-----------9499996289856699970456--4321000--------0-
Q 003492          407 FPDFIIGNYSDGNLVASLLAY-K---MG-----------ITQCTIAHALEKTKYPDSDIYW--KKFDEKY--------H-  460 (816)
Q Consensus       407 kPDIIh~h~~~~~lva~lla~-~---lg-----------ip~v~t~H~l~~~k~~~~~~~~--~~~~~~y--------~-  460 (816)
                      .|++||.|..++.+...-+-+ .   .|           ..+++|.|+..+.....-+...  +.+...+        + 
T Consensus       356 ~~~~ihlNegHpa~ai~ElmR~l~d~~gl~~~eA~eivr~~~~fTtHTpvpaglE~wp~~l~~~~lpr~~~ii~~In~~f  435 (876)
T d1ygpa_         356 DQVAIQLNDTHPTLAIVELQRVLVDLEKLDWHEAWDIVTKTFAYTNHTVMQEALEKWPRRLFGHLLPRHLEIIYDINWFF  435 (876)
T ss_dssp             HHEEEEEESSTTTHHHHHHHHHHHHTTCCCHHHHHHHHHHHEEEEECCCSGGGSCEEEHHHHHHHCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCEEEEECCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             53278744874074899999999986189999999986166888757886687265779999986345434576646999


Q ss_pred             -------------------------CHHHHHHHHHHHHHCCEEEECCHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCC
Q ss_conf             -------------------------0002228899974078999339988841024445334443455554101112788
Q 003492          461 -------------------------FSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGID  515 (816)
Q Consensus       461 -------------------------f~~~~~ae~~al~~aD~IIt~S~~~i~~~k~~~~qy~~~~~f~~p~l~~~~~gi~  515 (816)
                                               -..++..-..+++.+..+-.+|.---+-+++.+..          .++.    + 
T Consensus       436 l~~~~~~~~~d~~~l~~l~~i~~~~~~~~~~Ma~LAl~~S~~vNGVS~LH~ev~r~~~~~----------~f~~----~-  500 (876)
T d1ygpa_         436 LEDVAKKFPKDVDLLSRISIIEENSPERQIRMAFLAIVGSHKVNGVVELHSELIKTTIFK----------DFIK----F-  500 (876)
T ss_dssp             HHHHHHHSTTCTHHHHHHCSEECCSSSCEEEHHHHHHHHEEEEEESSHHHHHHHHHTTTH----------HHHH----H-
T ss_pred             HHHHHHHCCCCHHHHHHHHCCCCCCCCCEEEHHHHHHHHHCHHHHHHHHHHHHHHHHHHH----------HCCC----C-
T ss_conf             999998779979999753053656876413489999987021466799879999986666----------3145----4-


Q ss_pred             CCCCCEEEECCCCCCCCCCCC--CHHHHHHHH--------------------------------------HHCCCHHHCC
Q ss_conf             889948991499768888998--268998864--------------------------------------2023000016
Q 003492          516 VFDPKFNIVSPGADMDIYFPY--SEKQKRLTA--------------------------------------LHGSIEQLLF  555 (816)
Q Consensus       516 ~~~~ki~VIpnGVD~~~f~p~--~~~~~rl~~--------------------------------------~~~~~~~~l~  555 (816)
                      ..+.+|.-|.|||....+-..  +.-....++                                      .+..+..++-
T Consensus       501 ~~p~k~~niTNGVh~rrWl~~~np~L~~l~~~~ig~~~~~w~~d~~~l~~l~~~~dd~~~~~~~~~~k~~nK~rL~~~i~  580 (876)
T d1ygpa_         501 YGPSKFVNVTNGITPRRWLKQANPSLAKLISETLNDPTEEYLLDMAKLTQLEKYVEDKEFLKKWNQVKLNNKIRLVDLIK  580 (876)
T ss_dssp             HCGGGEEECCCCBCHHHHTTTTCHHHHHHHHHHTTCTTCGGGTCGGGGGGGGGGGGCTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             58766411106716303775229999999997558665111459999987875599889999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHH----HHHHHHHC-------------CCCCEEEEEEECCCCCCCC
Q ss_conf             966542224777799996999990257778978999----99998223-------------5998299999464799887
Q 003492          556 DPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLV----ECYGKNSQ-------------LRELVNLVVVAGYIDVNKS  618 (816)
Q Consensus       556 ~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Li----eA~~~l~~-------------~~~~~~LVIVG~g~~~~~~  618 (816)
                      .........|...+++....+.+-|+..+|....++    .-|..+++             ..+...+++.|...+    
T Consensus       581 ~~~~~~~~~g~~~~p~~lfdvq~kR~heYKRq~Ln~l~i~~ry~~lK~~~~~~~~l~~~~~~~~p~~~IFAGKAhP----  656 (876)
T d1ygpa_         581 KENDGVDIINREYLDDTLFDMQVKRIHEYKRQQLNVFGIIYRYLAMKNMLKNGASIEEVARKYPRKVSIFGGKSAP----  656 (876)
T ss_dssp             HTTTTCCCSCSTTGGGCEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHSCCEEEEEECCCCT----
T ss_pred             HHHCCCCCCCCEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCEEEEECCCCCC----
T ss_conf             8633433336241666468999999987456313468999999999740347622121023689728998388898----


Q ss_pred             CCHHHHHHHHHHHHHHHHC------CCCCCEEEECCCCCCCCHHHHHHHHHCCCCEEEECCC--CCCCCHHHHHHHHCCC
Q ss_conf             5357799999999999984------9999589902556768848999999710639997789--8988389999999199
Q 003492          619 KDREEIAEIEKMHELMKTY------KLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEAFGLTVVEAMTCGL  690 (816)
Q Consensus       619 ~d~e~~~~~~~l~~li~~~------~L~~~V~flG~~~~~v~~~el~~~la~aadifV~PS~--~EgFGltvlEAMA~Gl  690 (816)
                      .|......++.+.+.++-.      +...+|.|+.    -. +-.+.+.+-.++|+-.+.|.  .|+.|..-+-||..|.
T Consensus       657 ~d~~aK~iIk~I~~va~iin~d~~~~~~lKVVFle----nY-~vslAe~lvpg~DVwlnip~ap~EASGTSgMK~alNGa  731 (876)
T d1ygpa_         657 GYYMAKLIIKLINCVADIVNNDESIEHLLKVVFVA----DY-NVSKAEIIIPASDLSEHISTAGTEASGTSNMKFVMNGG  731 (876)
T ss_dssp             TCHHHHHHHHHHHHHHHHHTTCGGGTTSEEEEEET----TC-CHHHHHHHGGGCSEEEECCCTTCCSCCHHHHHHHTTTC
T ss_pred             CCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEC----CC-CHHHHHHHCCHHHHHHHCCCCCCCCCCCHHHHHHHCCC
T ss_conf             60889999999999999984480004643489706----87-56899874234243230799983457722769998698


Q ss_pred             CEEECCCCCCCCCCCC--CCEEEEEC
Q ss_conf             6898386662000024--88099989
Q 003492          691 PTFATCHGGPAEIIEH--GASGFHID  714 (816)
Q Consensus       691 PVIAT~~gG~~EiI~d--g~~G~li~  714 (816)
                      +++.|--|...|+.++  ++|||.|-
T Consensus       732 L~lstlDGwnvEi~e~vg~eN~f~fG  757 (876)
T d1ygpa_         732 LIIGTVDGANVEITREIGEDNVFLFG  757 (876)
T ss_dssp             EEEEESCTHHHHHHHHHCGGGSEEES
T ss_pred             EEECCCCCHHHHHHHHCCCCCEEEEC
T ss_conf             05535541589999863756469956


No 16 
>d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]}
Probab=98.46  E-value=5.9e-05  Score=48.94  Aligned_cols=271  Identities=13%  Similarity=0.087  Sum_probs=161.5

Q ss_pred             CCCCEEEEECCCCC-HHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCEEEECCH
Q ss_conf             99961999869991-69999999983994999962898566999704564321000000022288999740789993399
Q 003492          405 QGFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTY  483 (816)
Q Consensus       405 ~~kPDIIh~h~~~~-~lva~lla~~lgip~v~t~H~l~~~k~~~~~~~~~~~~~~y~f~~~~~ae~~al~~aD~IIt~S~  483 (816)
                      ..+||+|..+.-.. .+.+++++...++|.+++.-++ .+..    +.-...+...+        ...-..++.-+|+|+
T Consensus        86 ~~kPD~vlv~GDr~e~la~a~aa~~~~ipi~HiegG~-rsg~----~~~~~~de~~R--------~~iskls~~hf~~t~  152 (373)
T d1v4va_          86 EMGADYVLVHGDTLTTFAVAWAAFLEGIPVGHVEAGL-RSGN----LKEPFPEEANR--------RLTDVLTDLDFAPTP  152 (373)
T ss_dssp             HTTCSEEEEESSCHHHHHHHHHHHHTTCCEEEETCCC-CCSC----TTSSTTHHHHH--------HHHHHHCSEEEESSH
T ss_pred             HCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEECCCC-CCCC----CCCCCCHHHHH--------HHHCCCCCEEEECCH
T ss_conf             0376400111367531037788987621222413434-5543----35676166666--------552234432551221


Q ss_pred             HHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEECC-CCCCCCCCCCCHHHHHHHHHHCCCHHHCCCCCCCCC
Q ss_conf             8884102444533444345555410111278888994899149-976888899826899886420230000169665422
Q 003492          484 QEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSP-GADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDE  562 (816)
Q Consensus       484 ~~i~~~k~~~~qy~~~~~f~~p~l~~~~~gi~~~~~ki~VIpn-GVD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~  562 (816)
                      ...+....                    .|.+  ..++.++.+ ++|         .......+    ..         .
T Consensus       153 ~~~~~L~~--------------------~Ge~--~~~I~~vG~p~~D---------~i~~~~~~----~~---------~  188 (373)
T d1v4va_         153 LAKANLLK--------------------EGKR--EEGILVTGQTGVD---------AVLLAAKL----GR---------L  188 (373)
T ss_dssp             HHHHHHHT--------------------TTCC--GGGEEECCCHHHH---------HHHHHHHH----CC---------C
T ss_pred             HHHHHHHH--------------------HCCC--CCCEEECCCCHHH---------HHHHHHHH----CC---------C
T ss_conf             56666666--------------------3045--4213442662155---------77765431----10---------0


Q ss_pred             CCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf             24777799996999990257778978999999982235998299999464799887535779999999999998499995
Q 003492          563 HVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQ  642 (816)
Q Consensus       563 ~~g~l~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~~~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~  642 (816)
                      ....  ..++.+++++-|-...++...+.+++..+.+...++.+++......          .....+   .+......+
T Consensus       189 ~~~~--~~~~~~lvt~hr~~n~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~----------~~~~~~---~~~~~~~~n  253 (373)
T d1v4va_         189 PEGL--PEGPYVTVTMHRRENWPLLSDLAQALKRVAEAFPHLTFVYPVHLNP----------VVREAV---FPVLKGVRN  253 (373)
T ss_dssp             CTTC--CSSCEEEECCCCGGGGGGHHHHHHHHHHHHHHCTTSEEEEECCSCH----------HHHHHH---HHHHTTCTT
T ss_pred             CCCC--CCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCC----------CCHHHH---HHHHCCCCC
T ss_conf             0223--4455316884265553127899999999865335650356403422----------210355---554303332


Q ss_pred             EEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEEC-CCCCCCCCCCCCCEEEEECCCCHHHH
Q ss_conf             89902556768848999999710639997789898838999999919968983-86662000024880999899999999
Q 003492          643 FRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT-CHGGPAEIIEHGASGFHIDPYHPDQA  721 (816)
Q Consensus       643 V~flG~~~~~v~~~el~~~la~aadifV~PS~~EgFGltvlEAMA~GlPVIAT-~~gG~~EiI~dg~~G~li~p~d~e~l  721 (816)
                      +.++.    .+...++..++.. |++.+--     .|-.+.||.++|+|+|.- +.|.-.+-+..|.+ .++. .|.+++
T Consensus       254 ~~~~~----~l~~~~~l~ll~~-s~~vign-----Sssgi~Ea~~lg~P~Inir~~~eRqeg~~~g~n-vlv~-~d~~~I  321 (373)
T d1v4va_         254 FVLLD----PLEYGSMAALMRA-SLLLVTD-----SGGLQEEGAALGVPVVVLRNVTERPEGLKAGIL-KLAG-TDPEGV  321 (373)
T ss_dssp             EEEEC----CCCHHHHHHHHHT-EEEEEES-----CHHHHHHHHHTTCCEEECSSSCSCHHHHHHTSE-EECC-SCHHHH
T ss_pred             CEEEC----CCHHHHHHHHHHH-CEEEECC-----CCHHHHCCHHHCCCEEEECCCCCCHHHHHCCEE-EECC-CCHHHH
T ss_conf             00111----0007888887643-0168506-----412222003205868984887669878962904-9758-999999


Q ss_pred             HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
Q ss_conf             9999999874007999999999999999984022689999999999999999
Q 003492          722 AELMADFFGKCKENPSHWKKISDGGLKRIYERIIICRYTWKIYSERLMTLAG  773 (816)
Q Consensus       722 Ae~I~~~l~~l~~dp~~~~~ls~~ar~~v~e~~~~~~ysw~~~a~rll~ly~  773 (816)
                      ..++..++    .++..+.++..     ...     -|.=...+++..+...
T Consensus       322 ~~~i~~~l----~~~~~~~~~~~-----~~n-----pYGdG~as~rI~~~L~  359 (373)
T d1v4va_         322 YRVVKGLL----ENPEELSRMRK-----AKN-----PYGDGKAGLMVARGVA  359 (373)
T ss_dssp             HHHHHHHH----TCHHHHHHHHH-----SCC-----SSCCSCHHHHHHHHHH
T ss_pred             HHHHHHHH----CCHHHHHHCCC-----CCC-----CCCCCHHHHHHHHHHH
T ss_conf             99999997----19898864024-----889-----8989879999999999


No 17 
>d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]}
Probab=98.44  E-value=6.5e-05  Score=48.65  Aligned_cols=95  Identities=14%  Similarity=0.195  Sum_probs=63.1

Q ss_pred             CCCEEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCC----CCCCCCC-CCCCEEEEEC
Q ss_conf             9958990255676884899999971063999778989883899999991996898386----6620000-2488099989
Q 003492          640 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCH----GGPAEII-EHGASGFHID  714 (816)
Q Consensus       640 ~~~V~flG~~~~~v~~~el~~~la~aadifV~PS~~EgFGltvlEAMA~GlPVIAT~~----gG~~EiI-~dg~~G~li~  714 (816)
                      .++|....    +++..++.. .. .+++||.-    |-..++.||+.+|+|+|+...    ...+.-+ +....|..++
T Consensus       345 ~~Nv~~~~----~~Pq~~lL~-hp-~~~~fItH----GG~~s~~Eal~~GVP~lv~P~~~DQ~~na~rv~~~~G~G~~l~  414 (473)
T d2pq6a1         345 ADRGLIAS----WCPQDKVLN-HP-SIGGFLTH----CGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEID  414 (473)
T ss_dssp             TTTEEEES----CCCHHHHHT-ST-TEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECC
T ss_pred             CCCEEEEE----ECCHHHHHC-CC-CCCEEEEC----CCCCHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHCCEEEEEC
T ss_conf             47668863----088799964-77-67599956----8840899999859998965641121889999999717378618


Q ss_pred             CC-CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf             99-999999999999874007999999999999999
Q 003492          715 PY-HPDQAAELMADFFGKCKENPSHWKKISDGGLKR  749 (816)
Q Consensus       715 p~-d~e~lAe~I~~~l~~l~~dp~~~~~ls~~ar~~  749 (816)
                      .. +.++++++|.+++    .|+.. +++.+++.+.
T Consensus       415 ~~~t~~~l~~ai~~vl----~d~~~-~~~r~~a~~l  445 (473)
T d2pq6a1         415 TNVKREELAKLINEVI----AGDKG-KKMKQKAMEL  445 (473)
T ss_dssp             SSCCHHHHHHHHHHHH----TSHHH-HHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHH----CCCHH-HHHHHHHHHH
T ss_conf             9738999999999997----69768-9999999999


No 18 
>d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]}
Probab=98.13  E-value=0.0003  Score=44.05  Aligned_cols=259  Identities=12%  Similarity=0.101  Sum_probs=141.5

Q ss_pred             CCEEEEECCCC-CHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCEEEECCHHH
Q ss_conf             96199986999-16999999998399499996289856699970456432100000002228899974078999339988
Q 003492          407 FPDFIIGNYSD-GNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQE  485 (816)
Q Consensus       407 kPDIIh~h~~~-~~lva~lla~~lgip~v~t~H~l~~~k~~~~~~~~~~~~~~y~f~~~~~ae~~al~~aD~IIt~S~~~  485 (816)
                      +||+|..+.-. ..+.+++++..+++|++++ |+-+.+.    +..+...+...+.        ..-.-|+.-+|+++..
T Consensus        86 kPD~v~v~GDr~e~la~a~aa~~~~ipi~Hi-egG~~s~----~~~~~~pde~~R~--------~iskls~~hf~~~~~~  152 (376)
T d1f6da_          86 KPDVVLVHGDTTTTLATSLAAFYQRIPVGHV-EAGLRTG----DLYSPWPEEANRT--------LTGHLAMYHFSPTETS  152 (376)
T ss_dssp             CCSEEEEETTCHHHHHHHHHHHTTTCCEEEE-SCCCCCS----CTTSSTTHHHHHH--------HHHHTCSEEEESSHHH
T ss_pred             CCCCEEEECCCCCHHHHHHHHHHHCCEEEEE-ECCCCCC----CCCCCCCHHHHHH--------HHCCCEEEEEECCHHH
T ss_conf             6762243103443136899987407538998-5244654----2000474066554--------2032004887434788


Q ss_pred             HHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEECC-CCCCCCCCCCCHHHHHHHHHHCCCHHHCCCCCCCCCCC
Q ss_conf             84102444533444345555410111278888994899149-97688889982689988642023000016966542224
Q 003492          486 IAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSP-GADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHV  564 (816)
Q Consensus       486 i~~~k~~~~qy~~~~~f~~p~l~~~~~gi~~~~~ki~VIpn-GVD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~  564 (816)
                      .+...                    .-|.+  +.++.++.+ ++|.-..     .................       ..
T Consensus       153 ~~~L~--------------------~~G~~--~~~I~~vG~~~~D~l~~-----~~~~~~~~~~~~~~~~~-------~~  198 (376)
T d1f6da_         153 RQNLL--------------------RENVA--DSRIFITGNTVIDALLW-----VRDQVMSSDKLRSELAA-------NY  198 (376)
T ss_dssp             HHHHH--------------------HTTCC--GGGEEECCCHHHHHHHH-----HHHHTTTCHHHHHHHHT-------TC
T ss_pred             HHHHH--------------------HCCCC--CCCCCEECCCHHHHHHH-----HHHHHHCCCHHHHHHHC-------CC
T ss_conf             86877--------------------51898--65341216724878888-----77654235123211110-------22


Q ss_pred             CCCCCCCCCEEEEEECCC-CCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCE
Q ss_conf             777799996999990257-7789789999999822359982999994647998875357799999999999984999958
Q 003492          565 GTLSDRSKPIVFSMARLD-HVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQF  643 (816)
Q Consensus       565 g~l~~~~k~iIl~vGRL~-~~Kgi~~LieA~~~l~~~~~~~~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V  643 (816)
                      +......+.++++.-|.. ..+++..++.++..+.+...++.+++-.....          .....   ..+......++
T Consensus       199 ~~~~~~~~~ilvt~H~~~~~~~~~~~i~~~l~~~~~~~~~~~ii~p~~~~~----------~~~~~---~~~~~~~~~ni  265 (376)
T d1f6da_         199 PFIDPDKKMILVTGHRRESFGRGFEEICHALADIATTHQDIQIVYPVHLNP----------NVREP---VNRILGHVKNV  265 (376)
T ss_dssp             TTCCTTSEEEEECCCCBSSCCHHHHHHHHHHHHHHHHCTTEEEEEECCBCH----------HHHHH---HHHHHTTCTTE
T ss_pred             CCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCH----------HHHHH---HHHHHCCCCCC
T ss_conf             334777766998335411112009999999865434214047852544321----------24446---76664044451


Q ss_pred             EEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCC-CCCCCCCCCCCEEEEECCCCHHHHH
Q ss_conf             990255676884899999971063999778989883899999991996898386-6620000248809998999999999
Q 003492          644 RWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCH-GGPAEIIEHGASGFHIDPYHPDQAA  722 (816)
Q Consensus       644 ~flG~~~~~v~~~el~~~la~aadifV~PS~~EgFGltvlEAMA~GlPVIAT~~-gG~~EiI~dg~~G~li~p~d~e~lA  722 (816)
                      .++.    .....++..++.. |.+.+--|     |-.+.||-..|+|+|.-.. ..-.+-+..+ +-.++++ |.+++.
T Consensus       266 ~~~~----~l~~~~fl~ll~~-a~~vignS-----ssgi~Ea~~lg~P~Inir~~ter~~~~~~g-~~i~v~~-~~~~I~  333 (376)
T d1f6da_         266 ILID----PQEYLPFVWLMNH-AWLILTDS-----GGIQEEAPSLGKPVLVMRDTTERPEAVTAG-TVRLVGT-DKQRIV  333 (376)
T ss_dssp             EEEC----CCCHHHHHHHHHH-CSEEEESS-----SGGGGTGGGGTCCEEECSSCCSCHHHHHHT-SEEECCS-SHHHHH
T ss_pred             EEEC----CCCHHHHHHHHHH-CEEEEECC-----CCHHHHHHHHCCCEEECCCCCCCCCCEECC-EEEECCC-CHHHHH
T ss_conf             3323----5567899999841-63998368-----506766787489889727876576412368-0698789-999999


Q ss_pred             HHHHHHHHHHCCCHHHHHH
Q ss_conf             9999998740079999999
Q 003492          723 ELMADFFGKCKENPSHWKK  741 (816)
Q Consensus       723 e~I~~~l~~l~~dp~~~~~  741 (816)
                      +++.+.+    .++..+..
T Consensus       334 ~ai~~~l----~~~~~~~~  348 (376)
T d1f6da_         334 EEVTRLL----KDENEYQA  348 (376)
T ss_dssp             HHHHHHH----HCHHHHHH
T ss_pred             HHHHHHH----HCHHHHHH
T ss_conf             9999997----28576653


No 19 
>d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]}
Probab=98.07  E-value=0.00041  Score=43.18  Aligned_cols=280  Identities=15%  Similarity=0.104  Sum_probs=154.1

Q ss_pred             HHHHHHHHHCCCCEEEEECCCCC-HHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHH
Q ss_conf             99999988099961999869991-69999999983994999962898566999704564321000000022288999740
Q 003492          396 VGSEITAELQGFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNN  474 (816)
Q Consensus       396 ~~~~i~~~l~~kPDIIh~h~~~~-~lva~lla~~lgip~v~t~H~l~~~k~~~~~~~~~~~~~~y~f~~~~~ae~~al~~  474 (816)
                      ....+.+.   +||+|+.+.-.. .+.++.++..+++|++++ |+-+.+..    ..+...+...+.        ..-..
T Consensus        80 ~~~~~~~~---kpD~v~v~GDr~e~la~a~aa~~~~Ipi~Hi-egG~~s~~----~~~~~~de~~R~--------~iskl  143 (377)
T d1o6ca_          80 LDELFKDI---KPDIVLVHGDTTTTFAGSLAAFYHQIAVGHV-EAGLRTGN----KYSPFPEELNRQ--------MTGAI  143 (377)
T ss_dssp             HHHHHHHH---CCSEEEEETTCHHHHHHHHHHHHTTCEEEEE-SCCCCCSC----TTTTTTHHHHHH--------HHHHH
T ss_pred             HHHHHHHC---CCCEEEEEECCCCCCHHHHHHHHCCCEEEEE-ECCCCCCC----CCCCCCHHHHCC--------CCCCC
T ss_conf             05666533---6653676403454301566653114227999-51456543----323471455400--------35653


Q ss_pred             CCEEEECCHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCHHHC
Q ss_conf             78999339988841024445334443455554101112788889948991499768888998268998864202300001
Q 003492          475 ADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLL  554 (816)
Q Consensus       475 aD~IIt~S~~~i~~~k~~~~qy~~~~~f~~p~l~~~~~gi~~~~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~~~~~l  554 (816)
                      +|..+++|+...+...                    .-|.+  ..++.++.+        |..+.-...   ...     
T Consensus       144 s~~hf~~t~~~~~~L~--------------------~~G~~--~~~I~~vG~--------~~~D~i~~~---~~~-----  185 (377)
T d1o6ca_         144 ADLHFAPTGQAKDNLL--------------------KENKK--ADSIFVTGN--------TAIDALNTT---VRD-----  185 (377)
T ss_dssp             CSEEEESSHHHHHHHH--------------------HTTCC--GGGEEECCC--------HHHHHHHHH---CCS-----
T ss_pred             EEEEEECCHHHHHHHH--------------------HHCCC--CCEEEECCC--------HHHHHHHHH---HHH-----
T ss_conf             0488632346663443--------------------30344--542752342--------067888877---777-----


Q ss_pred             CCCCCCCCCCCCCCCCCCCEEEEEECCCCC-CCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             696654222477779999699999025777-8978999999982235998299999464799887535779999999999
Q 003492          555 FDPEQNDEHVGTLSDRSKPIVFSMARLDHV-KNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHEL  633 (816)
Q Consensus       555 ~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~-Kgi~~LieA~~~l~~~~~~~~LVIVG~g~~~~~~~d~e~~~~~~~l~~l  633 (816)
                         .......... ..++.++++.-|.... +.....+..........++..+++......              .....
T Consensus       186 ---~~~~~~~~~~-~~~~~ilvt~Hr~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--------------~~~~~  247 (377)
T d1o6ca_         186 ---GYSHPVLDQV-GEDKMILLTAHRRENLGEPMENMFKAIRRIVGEFEDVQVVYPVHLNP--------------VVREA  247 (377)
T ss_dssp             ---SCCCSTTTTT-TTSEEEEECC----------HHHHHHHHHHHHHCTTEEEEEC----C--------------HHHHH
T ss_pred             ---HHHHHHHHHC-CCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC--------------CCCHH
T ss_conf             ---7753334430-57844999832310146633789999875212335565323455211--------------32112


Q ss_pred             -HHHCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCC-CCCCCCCCCCCEEE
Q ss_conf             -9984999958990255676884899999971063999778989883899999991996898386-66200002488099
Q 003492          634 -MKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCH-GGPAEIIEHGASGF  711 (816)
Q Consensus       634 -i~~~~L~~~V~flG~~~~~v~~~el~~~la~aadifV~PS~~EgFGltvlEAMA~GlPVIAT~~-gG~~EiI~dg~~G~  711 (816)
                       .+.....++|.++.    .+...++..++.. |++++-=|     |-.+.||-..|+|+|.-.. +.-.+-+..|.+ .
T Consensus       248 ~~~~~~~~~ni~~~~----~l~~~~fl~llk~-s~~vIgnS-----ss~i~Ea~~lg~P~Inir~~tERqe~~~~g~n-i  316 (377)
T d1o6ca_         248 AHKHFGDSDRVHLIE----PLEVIDFHNFAAK-SHFILTDS-----GGVQEEAPSLGKPVLVLRDTTERPEGVEAGTL-K  316 (377)
T ss_dssp             HHHC--CCSSEEECC----CCCHHHHHHHHHH-CSEEEEC-------CHHHHGGGGTCCEEEECSCCC---CTTTTSS-E
T ss_pred             HHHCCCCCCCEEECC----CCCHHHHHHHHHH-HHEEECCC-----CHHHHHHHHHHCEEEEECCCCCCCCHHHCCEE-E
T ss_conf             210134565147513----2136889999864-22564164-----04677666654148980788758220006805-9


Q ss_pred             EECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
Q ss_conf             98999999999999999874007999999999999999984022689999999999999999
Q 003492          712 HIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERIIICRYTWKIYSERLMTLAG  773 (816)
Q Consensus       712 li~p~d~e~lAe~I~~~l~~l~~dp~~~~~ls~~ar~~v~e~~~~~~ysw~~~a~rll~ly~  773 (816)
                      ++++ |.+++.+++..++    .++..++.+.+     ...     .|.-...+++..+...
T Consensus       317 lv~~-~~~~I~~~i~~~l----~~~~~~~~~~~-----~~n-----pYGdG~as~rI~~~L~  363 (377)
T d1o6ca_         317 LAGT-DEENIYQLAKQLL----TDPDEYKKMSQ-----ASN-----PYGDGEASRRIVEELL  363 (377)
T ss_dssp             EECS-CHHHHHHHHHHHH----HCHHHHHHHHH-----CCC-----TTCCSCHHHHHHHHHH
T ss_pred             ECCC-CHHHHHHHHHHHH----HCHHHHHHHCC-----CCC-----CCCCCHHHHHHHHHHH
T ss_conf             8789-9999999999997----49687763065-----889-----8989829999999999


No 20 
>d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=97.37  E-value=0.0044  Score=36.09  Aligned_cols=85  Identities=14%  Similarity=0.149  Sum_probs=57.5

Q ss_pred             CCCCEEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCC----CCCCC-CCCCEEEEE
Q ss_conf             9995899025567688489999997106399977898988389999999199689838666----20000-248809998
Q 003492          639 LDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG----PAEII-EHGASGFHI  713 (816)
Q Consensus       639 L~~~V~flG~~~~~v~~~el~~~la~aadifV~PS~~EgFGltvlEAMA~GlPVIAT~~gG----~~EiI-~dg~~G~li  713 (816)
                      ..++|.+.+    +++..++... . .+++||.=    |-..++.||+.+|+|+|+....+    .+..+ +.-..|...
T Consensus       332 ~~~nv~~~~----w~Pq~~lL~h-p-~~~~fVtH----GG~gS~~EAl~~GvP~v~~P~~~DQ~~nA~rv~e~lG~Gv~l  401 (471)
T d2vcha1         332 KKRGFVIPF----WAPQAQVLAH-P-STGGFLTH----CGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRP  401 (471)
T ss_dssp             TTTEEEEES----CCCHHHHHHS-T-TEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECC
T ss_pred             CCCCEEECC----CCCHHHHHCC-C-CCCEEEEC----CCCCHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHEEEEEE
T ss_conf             678755216----5789998657-6-57889706----884289999985999897144012288999999972048997


Q ss_pred             CCC-----CHHHHHHHHHHHHHHHCCCHH
Q ss_conf             999-----999999999999874007999
Q 003492          714 DPY-----HPDQAAELMADFFGKCKENPS  737 (816)
Q Consensus       714 ~p~-----d~e~lAe~I~~~l~~l~~dp~  737 (816)
                      ...     +.++++++|.+++    +|++
T Consensus       402 ~~~~~~~~t~~~l~~ai~~vl----~~~~  426 (471)
T d2vcha1         402 RAGDDGLVRREEVARVVKGLM----EGEE  426 (471)
T ss_dssp             CCCTTSCCCHHHHHHHHHHHH----TSTH
T ss_pred             ECCCCCCCCHHHHHHHHHHHH----CCCH
T ss_conf             248788697999999999996----7947


No 21 
>d1pswa_ c.87.1.7 (A:) ADP-heptose LPS heptosyltransferase II {Escherichia coli [TaxId: 562]}
Probab=94.48  E-value=0.12  Score=26.23  Aligned_cols=104  Identities=14%  Similarity=0.064  Sum_probs=64.0

Q ss_pred             CCCCCEE-EEEE-CCCCCCCH--HHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCC---CCC
Q ss_conf             9999699-9990-25777897--899999998223599829999946479988753577999999999999849---999
Q 003492          569 DRSKPIV-FSMA-RLDHVKNM--TGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYK---LDG  641 (816)
Q Consensus       569 ~~~k~iI-l~vG-RL~~~Kgi--~~LieA~~~l~~~~~~~~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~---L~~  641 (816)
                      ..+++.| +..| +-.+.|.+  +..++...++.+.  +..++++|+..+            .+..+.+.....   ...
T Consensus       177 ~~~~~~i~~~~~~~~~~~k~wp~~~~~~L~~~l~~~--~~~ivl~g~~~e------------~~~~~~~~~~~~~~~~~~  242 (348)
T d1pswa_         177 SSERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDE--GYQVVLFGSAKD------------HEAGNEILAALNTEQQAW  242 (348)
T ss_dssp             CSSSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHT--TCEEEECCCGGG------------HHHHHHHHTTSCHHHHTT
T ss_pred             CCCCCEEEECCCCCHHHCCCCCHHHHHHHHHHHHHC--CCCCCCCCCCCH------------HHHHHHHHHHHHCCCCCC
T ss_conf             557876995355322322164467776667777644--874222444105------------999888887631014653


Q ss_pred             CEEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECC
Q ss_conf             5899025567688489999997106399977898988389999999199689838
Q 003492          642 QFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC  696 (816)
Q Consensus       642 ~V~flG~~~~~v~~~el~~~la~aadifV~PS~~EgFGltvlEAMA~GlPVIAT~  696 (816)
                      -+.+.|    ..+-.++..++.. ++++|.+.     +-.+--|.++|+|+|+--
T Consensus       243 ~~~l~g----~~sl~el~~li~~-a~l~I~~D-----tg~~HlAaa~g~p~i~lf  287 (348)
T d1pswa_         243 CRNLAG----ETQLDQAVILIAA-CKAIVTND-----SGLMHVAAALNRPLVALY  287 (348)
T ss_dssp             EEECTT----TSCHHHHHHHHHT-SSEEEEES-----SHHHHHHHHTTCCEEEEE
T ss_pred             CCCCCC----CCCHHHHHHHHHC-CEEEEECC-----CCHHHHHHHCCCCEEEEE
T ss_conf             335557----7437889998743-30576158-----608899998299989997


No 22 
>d1uana_ c.134.1.1 (A:) Hypothetical protein TT1542 {Thermus thermophilus [TaxId: 274]}
Probab=72.97  E-value=2  Score=17.87  Aligned_cols=98  Identities=15%  Similarity=0.191  Sum_probs=48.4

Q ss_pred             CCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCEEEECCCCCCCCCCC-CCCC---
Q ss_conf             425999855667665456899885631245388899999999999998899555523399624699888866-7630---
Q 003492          278 VFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTC-NQRL---  353 (816)
Q Consensus       278 ~~rI~iis~h~~~~~~~~lG~p~tGG~~vyvld~~raL~~eLa~~L~~~G~~V~~~i~IiT~~~p~~~~~~~-~~~~---  353 (816)
                      +|||++|++|.-             -.+..+-        .....++++|++|.    +++-..+....... ..+.   
T Consensus         1 m~~VLvi~aHPD-------------De~lg~G--------Gtiak~~~~G~~V~----vv~~T~G~~~~~~~~~~R~~E~   55 (227)
T d1uana_           1 MLDLLVVAPHPD-------------DGELGCG--------GTLARAKAEGLSTG----ILDLTRGEMGSKGTPEEREKEV   55 (227)
T ss_dssp             CEEEEEEESSTT-------------HHHHHHH--------HHHHHHHHTTCCEE----EEEEECCTTTCCSCHHHHHHHH
T ss_pred             CCEEEEEEECCC-------------HHHHHHH--------HHHHHHHHCCCEEE----EEEEECCCCCCCCCHHHHHHHH
T ss_conf             964999974887-------------5788789--------99999997699399----9997489788877615667777


Q ss_pred             ---EEECCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC
Q ss_conf             ---1214877569998068876643211244466423399999999999998809996199986999
Q 003492          354 ---ERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSD  417 (816)
Q Consensus       354 ---e~v~~~~~v~I~rvp~~~~~~~~~~~isr~~i~p~l~~f~~~~~~~i~~~l~~kPDIIh~h~~~  417 (816)
                         .++-|.+.+..+.+|....           ...+   .....+.+.+...   +||+|+.|+..
T Consensus        56 ~~a~~~lG~~~~~~l~~~d~~l-----------~~~~---~~~~~l~~~i~~~---~PdiV~t~~~~  105 (227)
T d1uana_          56 AEASRILGLDFRGNLGFPDGGL-----------ADVP---EQRLKLAQALRRL---RPRVVFAPLEA  105 (227)
T ss_dssp             HHHHHHHTCSEEEEEEECTTCC-----------CCCH---HHHHHHHHHHHHH---CEEEEEEECSC
T ss_pred             HHHHHHCCCCHHEEEEECCCCC-----------CCCH---HHHHHHHHHEECC---CCCEEEECCCC
T ss_conf             7666423533110122214554-----------3443---5410134202035---53189816765


No 23 
>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}
Probab=34.68  E-value=8.5  Score=13.52  Aligned_cols=33  Identities=24%  Similarity=0.556  Sum_probs=25.5

Q ss_pred             CEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCEEEECC
Q ss_conf             25999855667665456899885631245388899999999999998899555523399624
Q 003492          279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRL  340 (816)
Q Consensus       279 ~rI~iis~h~~~~~~~~lG~p~tGG~~vyvld~~raL~~eLa~~L~~~G~~V~~~i~IiT~~  340 (816)
                      |||++..-.|+.|+                         .|++.|.++||+|.    ++.+.
T Consensus         1 MKiLItG~tGfIG~-------------------------~l~~~L~~~g~~V~----~~d~~   33 (338)
T d1udca_           1 MRVLVTGGSGYIGS-------------------------HTCVQLLQNGHDVI----ILDNL   33 (338)
T ss_dssp             CEEEEETTTSHHHH-------------------------HHHHHHHHTTCEEE----EEECC
T ss_pred             CEEEEECCCCHHHH-------------------------HHHHHHHHCCCEEE----EEECC
T ss_conf             97999898878999-------------------------99999997849799----99788


No 24 
>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=31.61  E-value=9.5  Score=13.19  Aligned_cols=19  Identities=26%  Similarity=0.256  Sum_probs=12.9

Q ss_pred             HHHHHHHHCCCCEEECCEEEEC
Q ss_conf             9999999889955552339962
Q 003492          318 EMLLRIKRQGLDISPKILIVTR  339 (816)
Q Consensus       318 eLa~~L~~~G~~V~~~i~IiT~  339 (816)
                      ...+.|.++|++|.   .|+|.
T Consensus        14 ~~l~~L~~~g~~I~---~Vvt~   32 (203)
T d2blna2          14 LGIEALLAAGYEIS---AIFTH   32 (203)
T ss_dssp             HHHHHHHHTTCEEE---EEECC
T ss_pred             HHHHHHHHCCCCEE---EEECC
T ss_conf             99999997899889---99848


Done!