Query 003498
Match_columns 815
No_of_seqs 317 out of 1565
Neff 5.8
Searched_HMMs 29240
Date Tue Mar 26 17:29:34 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/003498.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1549-1552//hhsearch_pdb/003498hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4e8d_A Glycosyl hydrolase, fam 1.0 1 1 1128.7 47.7 554 32-731 3-585 (595)
2 3thd_A Beta-galactosidase; TIM 1.0 1 1 1121.6 44.0 571 28-732 6-620 (654)
3 1tg7_A Beta-galactosidase; TIM 1.0 1 1 1105.4 46.9 660 30-731 3-947 (971)
4 3d3a_A Beta-galactosidase; pro 1.0 1 1 1086.6 45.9 564 30-732 5-588 (612)
5 3og2_A Beta-galactosidase; TIM 1.0 1 1 979.1 50.8 656 29-730 22-978 (1003)
6 3u7v_A Beta-galactosidase; str 1.0 1 1 315.3 13.4 199 1-214 8-226 (552)
7 1vem_A Beta-amylase; beta-alph 1.0 1 1 212.0 2.9 244 45-308 12-296 (516)
8 3tty_A Beta-GAL, beta-galactos 1.0 1 1 209.2 19.9 284 45-352 6-390 (675)
9 1kwg_A Beta-galactosidase; TIM 1.0 1 1 203.8 19.3 270 49-349 1-391 (645)
10 3pzg_A Mannan endo-1,4-beta-ma 1.0 1 1 171.5 8.5 179 35-220 15-219 (383)
No 1
>4e8d_A Glycosyl hydrolase, family 35; TIM barrel, beta-propeller, glycohydrolase; 1.80A {Streptococcus pneumoniae} PDB: 4e8c_A
Probab=1.00 E-value=1 Score=1128.71 Aligned_cols=554 Identities=29% Similarity=0.529 Sum_probs=455.6
Q ss_pred EEEECCCCEEECCEEEEEEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEECCCHHHHHHHHHHH
Q ss_conf 19971672999796959999975199999323799999999789988997310776688896032035124999999999
Q 003498 32 SVSYDSKAIAINGKRRILISGSIHYPRSSPEMWPDLIQKAKDGGLDVIQTYVFWNGHEPSPGKYYFEGNYDLVKFIKLAK 111 (815)
Q Consensus 32 ~v~~d~~~~~idG~~~~i~sG~~Hy~R~~~~~W~~~l~k~Ka~GlN~V~tyv~Wn~hEp~~G~ydF~G~~dL~~fi~la~ 111 (815)
+++++ ++|++||+|++++||++||+|+||++|+++|+|||++|+|+|++|||||.|||+||+|||+|++||++||++|+
T Consensus 3 ~F~i~-~~f~~dG~p~~i~~G~~Hy~r~p~~~W~d~l~kmKa~G~NtV~~yv~W~~hEP~~G~fdF~g~~dL~~fl~~a~ 81 (595)
T 4e8d_A 3 RFEIR-DDFYLDGKSFKILSGAIHYFRVPPEDWYHSLYNLKALGFNTVETYVAWNLHEPCEGEFHFEGDLDLEKFLQIAQ 81 (595)
T ss_dssp CEEES-SSEEETTEECCCEEEEECGGGSCGGGHHHHHHHHHHTTCCEEEEECCHHHHCSBTTBCCCSGGGCHHHHHHHHH
T ss_pred EEEEC-CEEEECCEEEEEEEEEECHHHCCHHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCEECCCCHHHHHHHHHHHH
T ss_conf 07967-77999998989989985722299999999999999739977998536787089887541346366999999999
Q ss_pred HCCCEEEEECCCEECCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCC
Q ss_conf 84977997228300100188988861365799153069955699999999999999872222203798569851456556
Q 003498 112 QAGLYVNLRIGPYVCAEWNFGGFPVWLKYIPGINFRTENGPFKAEMHKFTKKIVDMMKAERLFESQGGPIILSQIENEYG 191 (815)
Q Consensus 112 ~~GL~vilr~GPyicaEw~~GG~P~WL~~~p~i~~Rt~d~~y~~~~~~~~~~i~~~i~~~~l~~~~gGpII~~QIENEyg 191 (815)
++||+|||||||||||||++||+|.||.++| +++|++|+.|++++++|+++|+++++ ++++++||||||+|||||||
T Consensus 82 ~~Gl~VilrpGPYi~aEw~~GG~P~WL~~~p-~~lRt~~p~y~~~~~~~~~~l~~~l~--~~~~~~GgpVI~~QvENEyG 158 (595)
T 4e8d_A 82 DLGLYAIVRPSPFICAEWEFGGLPAWLLTKN-MRIRSSDPAYIEAVGRYYDQLLPRLV--PRLLDNGGNILMMQVENEYG 158 (595)
T ss_dssp HTTCEEEEECCSCCCTTBGGGGCCGGGGGSS-SCSSSSCHHHHHHHHHHHHHHGGGTG--GGBGGGTSCEEEEESSSSGG
T ss_pred HCCCEEEEECCCCEECCCCCCCCCHHHCCCC-CEECCCCHHHHHHHHHHHHHHHHHHH--HHHCCCCCCEEEEECCCCCC
T ss_conf 8699899704774301217782775550687-45315897999999999999999998--87410699889997554346
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCC-------CC--CCCCCCCC-CCCC-CCC------CCCCCCC-C
Q ss_conf 7543459887788999999998459974526517889-------99--75422778-8655-667------9899999-9
Q 003498 192 PMEYEIGAPGRSYTRWAAKMAVGLGTGVPWIMCKQDD-------AP--DPLINTCN-GFYC-DYF------SPNKAYK-P 253 (815)
Q Consensus 192 ~~~~~~~~~~~~Y~~~l~~~~~~~g~~vP~~~~~~~~-------~p--~~vi~t~n-g~~~-~~f------~~~~p~~-P 253 (815)
++ + ++++|++||+++++++|++|||+||++.+ +. +++++||| |.+| +.| .+++|++ |
T Consensus 159 ~~----~-~~~~Y~~~l~~~~~~~Gi~vpl~t~d~~~~~~~~~G~~~~~~~~~t~nfg~~~~~~~~~~~~~~~~~p~~~P 233 (595)
T 4e8d_A 159 SY----G-EDKAYLRAIRQLMEECGVTCPLFTSDGPWRATLKAGTLIEEDLFVTGNFGSKAPYNFSQMQEFFDEHGKKWP 233 (595)
T ss_dssp GT----C-CCHHHHHHHHHHHHHTTCCSCEEEEECSSHHHHHHHCCGGGTCEEEEEESSCHHHHHHHHHHHHHHTTCCCC
T ss_pred CC----C-CCHHHHHHHHHHHHHCCCCEEEEECCCCCHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCC
T ss_conf 65----7-718999999999997599678998259513104588537888377761798566767788876303899998
Q ss_pred CEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCCCCCCCC-------CCCCCCCCCCCCC
Q ss_conf 065301652355548999889968899999999980980123315423789787799996-------3346778998776
Q 003498 254 KMWTEAWTGWYTEFGGPVPHRPVEDLAFSVAKFIQKGGSFINYYMYHGGTNFGRTAGGPF-------IATSYDYDAPLDE 326 (815)
Q Consensus 254 ~~~tE~~~Gwf~~wG~~~~~r~~ed~~~~v~~~~~~g~s~~N~YM~hGGTNfG~~~G~~~-------~~TSYDYdApl~E 326 (815)
+||+|||+|||++||++++.|++++++..+++++++| | +||||||||||||+|||+++ ++|||||||||+|
T Consensus 234 ~~~~Ef~~Gwfd~WG~~~~~~~~~~~~~~~~~~l~~g-s-~N~YM~hGGTNfG~~~Ga~~~~~~~~p~~TSYDYdApi~E 311 (595)
T 4e8d_A 234 LMCMEFWDGWFNRWKEPIITRDPKELADAVREVLEQG-S-INLYMFHGGTNFGFMNGCSARGTLDLPQVTSYDYDALLDE 311 (595)
T ss_dssp CEEEEEECSCCCBTTSCCCCCCHHHHHHHHHHHHHHS-E-EEEEEEECCBCCTTCBCEEEETTEEEEBCSBCCTTCSBCT
T ss_pred EEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC-C-CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 0898631654455699877789999999999999769-9-5498554532724246877777777787776677980586
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCE
Q ss_conf 79888613799999999987403776789983246999641135204653010001146651018984872002699630
Q 003498 327 YGLLRQPKWGHLKDLHRAIKLCEPALVSGNPTVMPLGNYQEAHVFKSKSACAAFLANYNQRTFAKVAFGNQHYNLPPWSI 406 (815)
Q Consensus 327 ~G~~~~pKy~~lr~l~~~i~~~~~~l~~~~p~~~~~g~~~~~~~y~~~~~~~~fl~n~~~~~~~~v~f~~~~~~lp~~sv 406 (815)
+|++ +|||.++|++...+.. ..++.+ |.. .++..|.... + . ...+.|++
T Consensus 312 ~G~~-t~Ky~~lr~~i~~~~~-~~p~~~--P~~------~~~~~~~~v~-----l-------------~---~~~~L~~~ 360 (595)
T 4e8d_A 312 EGNP-TAKYLAVKKMMATHFS-EYPQLE--PLY------KESMELDAIP-----L-------------V---EKVSLFET 360 (595)
T ss_dssp TSCB-CHHHHHHHHHHHHHCT-TSCCCC--CCC------CCBCCEEEEE-----E-------------E---EEEEHHHH
T ss_pred CCCC-CHHHHHHHHHHHHHCC-CCCCCC--CCC------CCCCCCCEEE-----E-------------C---CCCCHHHH
T ss_conf 7783-4789999999997477-999999--987------7643565087-----5-------------0---41548996
Q ss_pred EECCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEEEEEECCCC
Q ss_conf 10488873101143002332232024578778877522447786578988666611443158899976599999742899
Q 003498 407 SILPDCKNTVYNTARVGHQSTQMKMTPVPIHGGFSWQAFNEVPSAYGDSSFTMSGLLEQINTTRDATDYLWYMTDVKIDP 486 (815)
Q Consensus 407 silpdc~~~~~nta~v~~q~~~~~~~~~~~~~~~~w~~~~e~~~~~~~~~~~~~~~lEql~~t~d~sgYlwY~T~i~~~~ 486 (815)
|+ .+.+++.+ + .+..||+++| .+||++|||+++...
T Consensus 361 --l~---------------------------------~l~~~~~s--~----~P~~mE~lgq---~~GyvlY~t~i~~~~ 396 (595)
T 4e8d_A 361 --LD---------------------------------SLSSPVES--L----YPQKMEELGQ---SYGYLLYRTETNWDA 396 (595)
T ss_dssp --HH---------------------------------HHCCCEEE--S----SCCBTGGGTC---CSSEEEEEEEEECSS
T ss_pred --HH---------------------------------HCCCCCCC--C----CCCCHHHCCC---CCCEEEEEECCCCCC
T ss_conf --65---------------------------------50776436--9----9889889299---767599982268888
Q ss_pred CCCCCCCCCCCEEEECCCCEEEEEEECCEEEEEEECCCCCCEEEEEEEEECCCCC-CEEEEEEECCCCCCCCCCC--CCC
Q ss_conf 9664457986528856846299999999999999623588803897310014776-3899998325874556898--834
Q 003498 487 SEGFLRSGNYPVLTVMSAGHALHVFVNGQLAGTAYGSLEFPKLTFTEGVNMRAGI-NKIALLSIAVGLPNVGPHF--ETW 563 (815)
Q Consensus 487 ~~~~~~~g~~~~L~v~~~~d~~~vfVNG~~vGs~~g~~~~~~~~~~~~i~l~~G~-n~L~iL~e~~G~~NyG~~~--~~~ 563 (815)
. ...|++..++|+++|||||+++|++++.....+ + +++...+. ++|+||||||||+|||..+ +++
T Consensus 397 ~--------~~~L~~~~~~Dra~Vfvdg~~~g~l~r~~~~~~--i--~~~~~~~~~~~L~ILVEN~GRvNyG~~~~~~~~ 464 (595)
T 4e8d_A 397 E--------EERLRIIDGRDRAQLYVDGQWVKTQYQTEIGED--I--FYQGKKKGLSRLDILIENMGRVNYGHKFLADTQ 464 (595)
T ss_dssp S--------SEEEEEEEEESEEEEEETTEEEEEEEGGGTTSC--E--EECCCSSSEEEEEEEEECCCCCCSGGGTTCGGG
T ss_pred C--------CCEEECCCCCEEEEEEECCEEEEEEECCCCCCE--E--EEECCCCCCCEEEEEEECCCCCCCCCCCCCCCC
T ss_conf 8--------734632787448999989979999974567614--7--853577887789999985897516755686888
Q ss_pred CCCCCCCEEECCCCCCCCCCCCCCCE-EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEE
Q ss_conf 54211458985545876357648837-97278831011346789998755667734678884399999978999996189
Q 003498 564 NAGVLGPVTLNGLNEGRRDLSWQKWT-YKIGLEGEKLNLHSLSGGSSVEWAEGSLVAQRQPLTWYRTTFSAPAGNAPLAL 642 (815)
Q Consensus 564 ~kGI~G~V~L~g~~~g~~dLs~~~W~-y~vgL~GE~~~~~~~~~~~~~~W~~~~~~~~~~~~twYkttF~~p~g~dpv~L 642 (815)
+|||+|+|+|++. .|+ +|+ |.++|+.- ....|..... ..+|+|||++|++++..| |||
T Consensus 465 ~KGi~g~V~l~~~-----~l~--~W~~~~L~l~~~----------~~~~~~~~~~---~~~P~fy~g~f~~~~~~D-TfL 523 (595)
T 4e8d_A 465 RKGIRTGVCKDLH-----FLL--NWKHYPLPLDNP----------EKIDFSKGWT---QGQPAFYAYDFTVEEPKD-TYL 523 (595)
T ss_dssp SCEEEEEEEETTE-----ECC--CEEEEEECCCCG----------GGCCTTSCCC---TTSCEEEEEEEEESSCCB-EEE
T ss_pred CCCCCCCEEECCE-----ECC--CCEEEEECCCHH----------HHCCCCCCCC---CCCCEEEEEEEECCCCCC-EEE
T ss_conf 8787887699999-----857--848976333113----------2223455667---889758999997599888-799
Q ss_pred ECCCCCEEEEEECCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCC
Q ss_conf 60898429999988001101256556898876666675464323477999842488528776546673899996069999
Q 003498 643 DMGSMGKGQVWVNGQSIGRHWPAYKASGSCGYCSYTGTYTEKKCLSNCGEASQRWYHVPRSWLKPTGNLLVVFEEWGGNP 722 (815)
Q Consensus 643 dl~g~gKG~vwVNG~~IGRYW~~~~~~G~~~~c~y~G~~~~~kc~~~cg~PqQtlYhVP~~~Lk~g~N~LVifEe~gg~p 722 (815)
||+|||||+|||||+||||||+ +| |||||| ||++|||+|.|+|||||+++...
T Consensus 524 d~~gwgKG~v~VNG~nLGRYW~-------------~G-------------PQ~tLY-vP~~~Lk~G~NeIvvfEl~~~~~ 576 (595)
T 4e8d_A 524 DLSEFGKGVAFVNGQNLGRFWN-------------VG-------------PTLSLY-IPHSYLKEGANRIIIFETEGQYK 576 (595)
T ss_dssp ECTTCCEEEEEETTEEEEEEET-------------TC-------------SBCEEE-ECGGGSCSEEEEEEEEESSSCCC
T ss_pred ECCCCCEEEEEECCEEEECCCC-------------CC-------------CEEEEE-ECHHHHCCCCCEEEEEEECCCCC
T ss_conf 6788864889988721352467-------------79-------------768899-63899576872699999527888
Q ss_pred CCEEEEEEC
Q ss_conf 851997331
Q 003498 723 NGISLVRRE 731 (815)
Q Consensus 723 ~~I~~~t~~ 731 (815)
..|+|....
T Consensus 577 ~~i~~~~~p 585 (595)
T 4e8d_A 577 EEIHLTRKP 585 (595)
T ss_dssp SEEEEESSC
T ss_pred CEEEEECCC
T ss_conf 547863466
No 2
>3thd_A Beta-galactosidase; TIM-barrel domain, glycosyl hydrolase, glycosylation, hydrolase; HET: NAG DGJ; 1.79A {Homo sapiens} PDB: 3thc_A*
Probab=1.00 E-value=1 Score=1121.56 Aligned_cols=571 Identities=30% Similarity=0.476 Sum_probs=453.0
Q ss_pred CCCEEEEECCCCEEECCEEEEEEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEECCCHHHHHHH
Q ss_conf 32101997167299979695999997519999932379999999978998899731077668889603203512499999
Q 003498 28 EVEGSVSYDSKAIAINGKRRILISGSIHYPRSSPEMWPDLIQKAKDGGLDVIQTYVFWNGHEPSPGKYYFEGNYDLVKFI 107 (815)
Q Consensus 28 ~~~~~v~~d~~~~~idG~~~~i~sG~~Hy~R~~~~~W~~~l~k~Ka~GlN~V~tyv~Wn~hEp~~G~ydF~G~~dL~~fi 107 (815)
.+++.|+||+++|++||+|++++||++||+|+||++|+++|+|||++|+|+|++||+||.|||+||+|||+|++||++||
T Consensus 6 ~r~~~v~~d~~~f~ldGkp~~i~sG~~Hy~r~p~~~W~d~l~kmKa~G~NtV~~yv~W~~hEP~~G~fdF~g~~DL~~fl 85 (654)
T 3thd_A 6 QRMFEIDYSRDSFLKDGQPFRYISGSIHYSRVPRFYWKDRLLKMKMAGLNAIQTYVPWNFHEPWPGQYQFSEDHDVEYFL 85 (654)
T ss_dssp CCCEEEETTTTEEEETTEEECCEEEECCGGGSCGGGHHHHHHHHHHTTCSEEEEECCHHHHCSBTTBCCCSGGGCHHHHH
T ss_pred CCCEEEEECCCEEEECCEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEECHHHCCCCCCCCCCCCHHHHHHHH
T ss_conf 87179997289799999787898886464549989999999999971998899996336408989846745537799999
Q ss_pred HHHHHCCCEEEEECCCEECCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCC
Q ss_conf 99998497799722830010018898886136579915306995569999999999999987222220379856985145
Q 003498 108 KLAKQAGLYVNLRIGPYVCAEWNFGGFPVWLKYIPGINFRTENGPFKAEMHKFTKKIVDMMKAERLFESQGGPIILSQIE 187 (815)
Q Consensus 108 ~la~~~GL~vilr~GPyicaEw~~GG~P~WL~~~p~i~~Rt~d~~y~~~~~~~~~~i~~~i~~~~l~~~~gGpII~~QIE 187 (815)
++|+++||+|||||||||||||++||+|.||.++|+|.+|++|+.|++++++|+++|+++++ ++++++||||||+|||
T Consensus 86 ~~a~~~GL~ViLr~GPyi~aEw~~GG~P~WL~~~p~i~~Rt~~p~y~~~~~~~~~~l~~~l~--~~~~~~ggpVI~~QvE 163 (654)
T 3thd_A 86 RLAHELGLLVILRPGPYICAEWEMGGLPAWLLEKESILLRSSDPDYLAAVDKWLGVLLPKMK--PLLYQNGGPVITVQVE 163 (654)
T ss_dssp HHHHHTTCEEEEECCSCCCTTBGGGGCCGGGGGSTTCCSSSCCHHHHHHHHHHHHHHHHHHG--GGBGGGTSSEEEEECS
T ss_pred HHHHHCCCEEEECCCCCCCCCCCCCCCCHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHH--HHHCCCCCCEEEEEEC
T ss_conf 99998699899556774321038886896785599845742998999999999999999852--4312479978999831
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCCCCEEECCCCCCCCCCCCCC---CCCCC-CCCCC-------------CC
Q ss_conf 6556754345988778899999999845-9974526517889997542277---88655-66798-------------99
Q 003498 188 NEYGPMEYEIGAPGRSYTRWAAKMAVGL-GTGVPWIMCKQDDAPDPLINTC---NGFYC-DYFSP-------------NK 249 (815)
Q Consensus 188 NEyg~~~~~~~~~~~~Y~~~l~~~~~~~-g~~vP~~~~~~~~~p~~vi~t~---ng~~~-~~f~~-------------~~ 249 (815)
||||++ +.|+++||+||++++++. |+.||+++|++. .+.+.+| +|.+| .+|.+ .+
T Consensus 164 NEyG~y----~~~d~~Ym~~l~~~~~~~~Gi~v~l~t~D~~---~~~~~~~g~~~g~~~t~~f~~~~~~~~~~~~~~~~~ 236 (654)
T 3thd_A 164 NEYGSY----FACDFDYLRFLQKRFRHHLGDDVVLFTTDGA---HKTFLKCGALQGLYTTVDFGTGSNITDAFLSQRKCE 236 (654)
T ss_dssp SCGGGS----SCCCHHHHHHHHHHHHHHHCSSSEEEEEEES---SHHHHHHHCBTTBEEEEECCTTSCHHHHHHHHHHHC
T ss_pred CCCCCC----CCCCHHHHHHHHHHHHHHCCCCEEEEEECCC---CCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHC
T ss_conf 445665----6561999999999998744996556960698---534434787577131024687963789999999748
Q ss_pred CCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCCCCCCC--C--CCCCCCCCCCCC
Q ss_conf 999906530165235554899988996889999999998098012331542378978779999--6--334677899877
Q 003498 250 AYKPKMWTEAWTGWYTEFGGPVPHRPVEDLAFSVAKFIQKGGSFINYYMYHGGTNFGRTAGGP--F--IATSYDYDAPLD 325 (815)
Q Consensus 250 p~~P~~~tE~~~Gwf~~wG~~~~~r~~ed~~~~v~~~~~~g~s~~N~YM~hGGTNfG~~~G~~--~--~~TSYDYdApl~ 325 (815)
|++|+||+|||+|||++||++++.|++++++..+++++++|+| +||||||||||||||||++ + ++|||||||||+
T Consensus 237 p~~P~~~~Ef~~Gwfd~WG~~~~~~~~~~~~~~~~~~l~~g~s-~N~YM~hGGTNfG~~~Ga~~~~~~~~TSYDYdApi~ 315 (654)
T 3thd_A 237 PKGPLINSEFYTGWLDHWGQPHSTIKTEAVASSLYDILARGAS-VNLYMFIGGTNFAYWNGANSPYAAQPTSYDYDAPLS 315 (654)
T ss_dssp SSSCCEEEEEESSCCCCTTSCCCCCCHHHHHHHHHHHHHTTCE-EEEECSBCCBCCTTCBCEETTTEECCSBCCTTCSBC
T ss_pred CCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC-EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 9989599610153577579987788989999999999965984-589863453362324678877887356676787246
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCEEEEEECCCCCCCCCCC
Q ss_conf 67988861379999999998740377678998324699964113520465301000114665101898487200269963
Q 003498 326 EYGLLRQPKWGHLKDLHRAIKLCEPALVSGNPTVMPLGNYQEAHVFKSKSACAAFLANYNQRTFAKVAFGNQHYNLPPWS 405 (815)
Q Consensus 326 E~G~~~~pKy~~lr~l~~~i~~~~~~l~~~~p~~~~~g~~~~~~~y~~~~~~~~fl~n~~~~~~~~v~f~~~~~~lp~~s 405 (815)
|+|++ +|||.++|++. +.+.+......|.. .++..|.... + ....+.|+
T Consensus 316 E~G~~-t~Ky~~lr~li---~~~~~~~~~~~P~~------~p~~~~~~v~-----l----------------~~~~~L~~ 364 (654)
T 3thd_A 316 EAGDL-TEKYFALRNII---QKFEKVPEGPIPPS------TPKFAYGKVT-----L----------------EKLKTVGA 364 (654)
T ss_dssp TTCCB-CHHHHHHHHHH---TTTSCCCCSCCCCC------CCBCCCEEEE-----C----------------EEEEETTT
T ss_pred CCCCC-CHHHHHHHHHH---HHHCCCCCCCCCCC------CCCCCCCCEE-----E----------------CCCCCHHH
T ss_conf 35673-37899999999---97147998889998------7645667575-----2----------------22234899
Q ss_pred EEECCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEEEEEEC
Q ss_conf 01048887310114300233223202457877887752244--7786578988666611443158899976599999742
Q 003498 406 ISILPDCKNTVYNTARVGHQSTQMKMTPVPIHGGFSWQAFN--EVPSAYGDSSFTMSGLLEQINTTRDATDYLWYMTDVK 483 (815)
Q Consensus 406 vsilpdc~~~~~nta~v~~q~~~~~~~~~~~~~~~~w~~~~--e~~~~~~~~~~~~~~~lEql~~t~d~sgYlwY~T~i~ 483 (815)
+ |+ .+. +++.+ . .+..||+++| .+||++|||+++
T Consensus 365 ~--l~---------------------------------~l~~~~~~~s--~----~P~tmE~l~Q---~~GyvlY~t~i~ 400 (654)
T 3thd_A 365 A--LD---------------------------------ILCPSGPIKS--L----YPLTFIQVKQ---HYGFVLYRTTLP 400 (654)
T ss_dssp T--HH---------------------------------HHCTTCCEEE--S----SCCBTGGGTC---CSSEEEEEEECS
T ss_pred H--HH---------------------------------HHCCCCCCCC--C----CCCCHHHHCC---CCCEEEEEEECC
T ss_conf 7--77---------------------------------6276777536--9----9889899288---757699983257
Q ss_pred CCCCCCCCCCCCCCEEE--ECCCCEEEEEEECCEEEEEEECCCCCCEEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCC
Q ss_conf 89996644579865288--5684629999999999999962358880389731001477638999983258745568988
Q 003498 484 IDPSEGFLRSGNYPVLT--VMSAGHALHVFVNGQLAGTAYGSLEFPKLTFTEGVNMRAGINKIALLSIAVGLPNVGPHFE 561 (815)
Q Consensus 484 ~~~~~~~~~~g~~~~L~--v~~~~d~~~vfVNG~~vGs~~g~~~~~~~~~~~~i~l~~G~n~L~iL~e~~G~~NyG~~~~ 561 (815)
....+ ...|. +..++|+++|||||+++|++++.. ..+ +++..+.+ ++|+||||||||+|||..+
T Consensus 401 ~~~~~-------~~~l~l~~~~v~Dra~Vfvdg~~~G~l~r~~---~~~--l~~~~~~~-~~L~ILVEN~GRvNyG~~i- 466 (654)
T 3thd_A 401 QDCSN-------PAPLSSPLNGVHDRAYVAVDGIPQGVLERNN---VIT--LNITGKAG-ATLDLLVENMGRVNYGAYI- 466 (654)
T ss_dssp SCEEE-------EEEEECTTCCEESEEEEEETTEEEEEEETTT---BCE--EEEEECTT-CEEEEEEECCCCBCSSGGG-
T ss_pred CCCCC-------CCCEEECCCCCCEEEEEEECCEEEEEEECCC---CEE--EECCCCCC-CEEEEEEECCCCCCCCCCC-
T ss_conf 77788-------8403430478632799988997999996156---526--75058889-8899999748865468877-
Q ss_pred CCCCCCCCCEEECCCCCCCCCCCCCCCE-EECCCCCCCCCCCC-----CCCCCCCCCCCCCCCCCCCCCEEEEEEEECCC
Q ss_conf 3454211458985545876357648837-97278831011346-----78999875566773467888439999997899
Q 003498 562 TWNAGVLGPVTLNGLNEGRRDLSWQKWT-YKIGLEGEKLNLHS-----LSGGSSVEWAEGSLVAQRQPLTWYRTTFSAPA 635 (815)
Q Consensus 562 ~~~kGI~G~V~L~g~~~g~~dLs~~~W~-y~vgL~GE~~~~~~-----~~~~~~~~W~~~~~~~~~~~~twYkttF~~p~ 635 (815)
+++|||+|+|+|++. .|+ +|+ |.+.++........ ..+.....|.... ....+|+||+++|+++.
T Consensus 467 ~d~KGi~g~V~l~~~-----~l~--~W~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~P~fy~g~f~i~~ 537 (654)
T 3thd_A 467 NDFKGLVSNLTLSSN-----ILT--DWTIFPLDTEDAVRSHLGGWGHRDSGHHDEAWAHNS--SNYTLPAFYMGNFSIPS 537 (654)
T ss_dssp CCCCEECSCCEETTE-----ECC--CEEEEECCHHHHHHTTTTTTCCC----------------CCCCCEEEEEEECCCS
T ss_pred CCCCCCCCCEEECCE-----ECC--CCEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCC--CCCCCCEEEEEEEECCC
T ss_conf 878988776578999-----827--848986526125544320122333322233445666--67888779999997267
Q ss_pred CC----CCEEEECCCCCEEEEEECCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCC-CC
Q ss_conf 99----96189608984299999880011012565568988766666754643234779998424885287765466-73
Q 003498 636 GN----APLALDMGSMGKGQVWVNGQSIGRHWPAYKASGSCGYCSYTGTYTEKKCLSNCGEASQRWYHVPRSWLKPT-GN 710 (815)
Q Consensus 636 g~----dpv~Ldl~g~gKG~vwVNG~~IGRYW~~~~~~G~~~~c~y~G~~~~~kc~~~cg~PqQtlYhVP~~~Lk~g-~N 710 (815)
+. .+|||||+|||||+|||||+||||||+++ | |||||| ||++|||+| .|
T Consensus 538 ~~~~~p~DTFLd~~gWgKGvV~VNG~NLGRYW~~~------------G-------------PQ~TLY-vP~p~Lk~G~~N 591 (654)
T 3thd_A 538 GIPDLPQDTFIQFPGWTKGQVWINGFNLGRYWPAR------------G-------------PQLTLF-VPQHILMTSAPN 591 (654)
T ss_dssp SCTTCSCBEEEECTTCCSEEEEETTEEEEEECTTT------------C-------------SCCCEE-ECGGGCCSSSCE
T ss_pred CCCCCCCCEEEECCCCCEEEEEECCCCCCCCCCCC------------C-------------CEEEEE-ECHHHHCCCCCC
T ss_conf 77888877799678887079998980254254777------------9-------------768889-648995889984
Q ss_pred EEEEEEECCCCC-------CCEEEEEECH
Q ss_conf 899996069999-------8519973310
Q 003498 711 LLVVFEEWGGNP-------NGISLVRREI 732 (815)
Q Consensus 711 ~LVifEe~gg~p-------~~I~~~t~~~ 732 (815)
+|||||+++... ..|.|....+
T Consensus 592 eIiVfEle~~~~~~~~~~~~~i~~~~~P~ 620 (654)
T 3thd_A 592 TITVLELEWAPCSSDDPELCAVTFVDRPV 620 (654)
T ss_dssp EEEEEESSCCSCSSSCGGGSEEEEESSCC
T ss_pred EEEEEEEECCCCCCCCCCCCEEEEECCCC
T ss_conf 69999951687655556652599635565
No 3
>1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A*
Probab=1.00 E-value=1 Score=1105.37 Aligned_cols=660 Identities=26% Similarity=0.422 Sum_probs=538.9
Q ss_pred CEEEEECCCCEEECCEEEEEEEEEEECCCCC-CCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEECCCHHHHHHHH
Q ss_conf 1019971672999796959999975199999-323799999999789988997310776688896032035124999999
Q 003498 30 EGSVSYDSKAIAINGKRRILISGSIHYPRSS-PEMWPDLIQKAKDGGLDVIQTYVFWNGHEPSPGKYYFEGNYDLVKFIK 108 (815)
Q Consensus 30 ~~~v~~d~~~~~idG~~~~i~sG~~Hy~R~~-~~~W~~~l~k~Ka~GlN~V~tyv~Wn~hEp~~G~ydF~G~~dL~~fi~ 108 (815)
...|+||+++|+|||+|++++||++||+|+| |++|+++|+|||++|+|+|++|||||.|||+||+|||+|++||++||+
T Consensus 3 ~~~v~~d~~~~~idG~p~~l~sG~~hy~r~p~~~~W~d~l~kmka~G~NtV~~yvfW~~hEP~~G~fdF~g~~dL~~fl~ 82 (971)
T 1tg7_A 3 QKYVTWDEHSIFVNGERLMIFSGEVHPYRLPVASLYIDIFEKVKALGFNCVSFYVDWALLEGNPGHYSAEGIFDLQPFFD 82 (971)
T ss_dssp CSSEEECSSCEEETTEEECEEEEECCGGGSCCGGGHHHHHHHHHTTTCCEEEEECCHHHHCSBTTBCCCCGGGCSHHHHH
T ss_pred CCEEEECCCEEEECCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHCCCCCEECCCCHHHHHHHHH
T ss_conf 53699848879999949999998888210894678999999999709999999646777089888322456678999999
Q ss_pred HHHHCCCEEEEECCCEECCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCC
Q ss_conf 99984977997228300100188988861365799153069955699999999999999872222203798569851456
Q 003498 109 LAKQAGLYVNLRIGPYVCAEWNFGGFPVWLKYIPGINFRTENGPFKAEMHKFTKKIVDMMKAERLFESQGGPIILSQIEN 188 (815)
Q Consensus 109 la~~~GL~vilr~GPyicaEw~~GG~P~WL~~~p~i~~Rt~d~~y~~~~~~~~~~i~~~i~~~~l~~~~gGpII~~QIEN 188 (815)
+|+++||+|||||||||||||++||+|.||.+.|+ .+|++||.|++++++|+++|+++++ ++++++||||||+||||
T Consensus 83 ~a~e~Gl~ViLr~GPyi~aE~~~GG~P~WL~~~p~-~lR~~~p~y~~~~~~~~~~l~~~~~--~~~~~~ggpVI~~QveN 159 (971)
T 1tg7_A 83 AAKEAGIYLLARPGPYINAEVSGGGFPGWLQRVDG-ILRTSDEAYLKATDNYASNIAATIA--KAQITNGGPIILYQPEN 159 (971)
T ss_dssp HHHHHTCEEEEECCSCCCTTBGGGGCCGGGGGCSS-CTTSSCHHHHHHHHHHHHHHHHHHH--HTBGGGTSSEEEECCSS
T ss_pred HHHHCCCEEEEECCCCCCCEECCCCCCEEECCCCC-EECCCCHHHHHHHHHHHHHHHHHHH--HHHHCCCCCEEEEECCC
T ss_conf 99985998997058742114447873156035688-7547998999999999999999986--43201799777873266
Q ss_pred CCCCCC-CCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCC----CCCCCCCCCCC---------CCCCC--------CC-
Q ss_conf 556754-345988778899999999845997452651788----99975422778---------86556--------67-
Q 003498 189 EYGPME-YEIGAPGRSYTRWAAKMAVGLGTGVPWIMCKQD----DAPDPLINTCN---------GFYCD--------YF- 245 (815)
Q Consensus 189 Eyg~~~-~~~~~~~~~Y~~~l~~~~~~~g~~vP~~~~~~~----~~p~~vi~t~n---------g~~~~--------~f- 245 (815)
|||++. +.+++.+++|++|++++++++|++||++||++. ..+..+...++ +++|. .|
T Consensus 160 Eyg~~~~~~~~~~~~~Y~~~l~~~~r~~g~~vPl~tn~~~~~~~~~~~~~~g~ldv~~~D~Yp~g~~~~~~~~~~~~~~~ 239 (971)
T 1tg7_A 160 EYSGACCGYNGFPDGSYMQYIEDHARDAGIVVPFISNDAWAAGHNAPGTGAGAVDIYGHDSYPLGFDCANPSTWPSGNLP 239 (971)
T ss_dssp CCCCBCTTCCCCSCHHHHHHHHHHHHHTTCCSCBBCCBSSSSCTTCTTSCTTCCSBCEEEECTTCSCCSCTTCCCTTCSC
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCC
T ss_conf 56766666531669999999999999709983399954754455465433573248753777665656775542000001
Q ss_pred -------CCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHH-----HHHHHCCEEEEEEEEECCCCCCCCCCCCC
Q ss_conf -------989999990653016523555489998899688999999-----99980980123315423789787799996
Q 003498 246 -------SPNKAYKPKMWTEAWTGWYTEFGGPVPHRPVEDLAFSVA-----KFIQKGGSFINYYMYHGGTNFGRTAGGPF 313 (815)
Q Consensus 246 -------~~~~p~~P~~~tE~~~Gwf~~wG~~~~~r~~ed~~~~v~-----~~~~~g~s~~N~YM~hGGTNfG~~~G~~~ 313 (815)
...+|++|.|++|||+|||++||+.+++|++++.+..++ .+++.|++++||||||||||||+++ ++.
T Consensus 240 ~~~~d~~r~~~p~~P~~~~E~~~Gw~~~Wg~~~~~~~~~~~~~~~~~~~~~~~la~Ga~~vnyYm~~GGTNfG~~~-g~~ 318 (971)
T 1tg7_A 240 TYFHTSHEQQSPSTPYSLVEFQGGAFDPWGGVGFAKCAALLNHEFERVFYKNDFSFGVAFLNLYMIFGGTNWGNLG-HPG 318 (971)
T ss_dssp CCHHHHHHHHCTTSCCEEEEEESSCCCCTTCCCHHHHHHHTSHHHHHHHHHHHHTTTCSEEEEECSBCCBCCTTCB-CTT
T ss_pred HHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCC-CCC
T ss_conf 5699986423899997998137857567788765666355768999999999997799789999710435776567-877
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC--------------CCCCCC--CCCEEEE------
Q ss_conf 334677899877679888613799999999987403776789983--------------246999--6411352------
Q 003498 314 IATSYDYDAPLDEYGLLRQPKWGHLKDLHRAIKLCEPALVSGNPT--------------VMPLGN--YQEAHVF------ 371 (815)
Q Consensus 314 ~~TSYDYdApl~E~G~~~~pKy~~lr~l~~~i~~~~~~l~~~~p~--------------~~~~g~--~~~~~~y------ 371 (815)
++|||||||||+|+|++++|||.++|+||++++.+++ ++..++. .+.+.+ ..++..|
T Consensus 319 ~~tSYDy~Apl~E~G~~t~~ky~elr~l~~~l~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~a~f~~~r~~~ 397 (971)
T 1tg7_A 319 GYTSYDYGSAISESRNITREKYSELKLLGNFAKVSPG-YLVANPGDLSTSTYTNTADLTVTPLLGSNSSASSFFVIRHSD 397 (971)
T ss_dssp SCSBCCTTCSBCTTCCCCSHHHHHHHHHHHHHHTCHH-HHTSEECCCBSSSSBSCTTEEEEEEECSSTTSCEEEEEEESS
T ss_pred CCEEECCCCEECCCCCCCHHHHHHHHHHHHHHHHCHH-HHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCC
T ss_conf 3005234756076788364689999999999986757-651587667654446787438999434789851899996567
Q ss_pred ----------------------------------------------------ECC-------------------------
Q ss_conf ----------------------------------------------------046-------------------------
Q 003498 372 ----------------------------------------------------KSK------------------------- 374 (815)
Q Consensus 372 ----------------------------------------------------~~~------------------------- 374 (815)
.+.
T Consensus 398 ~~~~~~~~~~l~v~ts~g~~~iP~~~g~i~l~gr~ski~~~d~~~g~~~l~ysTa~~~t~~~~~~~~v~vly~~~g~~~e 477 (971)
T 1tg7_A 398 YSSQASVEYKLTVPTSAGNLTIPQLGGSLTLSGRDSKIHVTDYDVAGTNILYSTAEVFTWKKFNNEKVLVLYGGPGEHHE 477 (971)
T ss_dssp TTCCCCEEECEEEEETTEEEEECSSSSCEEECTTCCEEEEEEEEETTEEEEEESSEEEEEEEETTEEEEEEEECTTCEEE
T ss_pred CCCCCCEEEEEEEECCCCCEECCCCCCCEEECCCCEEEEECCCCCCCEEEEEEEEEEEEEEEECCCEEEEEECCCCCCEE
T ss_conf 87777448999975589877616778736788973089953432487689986200479888789049999848997337
Q ss_pred ------------CCE-E---------EEECCCCCCCEEE-EEECCC-----------CCCCCC-----------------
Q ss_conf ------------530-1---------0001146651018-984872-----------002699-----------------
Q 003498 375 ------------SAC-A---------AFLANYNQRTFAK-VAFGNQ-----------HYNLPP----------------- 403 (815)
Q Consensus 375 ------------~~~-~---------~fl~n~~~~~~~~-v~f~~~-----------~~~lp~----------------- 403 (815)
..| + +|+.|.+.....+ |+|++. .|.+|+
T Consensus 478 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~lld~~~A~~~w~p~~~~~~~~~~~~~~~~~~ 557 (971)
T 1tg7_A 478 FAVSGASSSSVVEGSSSGISSKKVGKALVVAWDVSTARRIVQVGSLKVFLLDRNSAYNYWVPQVPTKGTAPGYSNQETTA 557 (971)
T ss_dssp EEEETCCCCEEEESCCTTCEEEEETTEEEEEEECCSSCEEEEETTEEEEEEEHHHHTTEECCCCCSSSSCCCCCSHHHHH
T ss_pred EEEECCCCEEEECCCCCCEEEECCCCEEEEEECCCCCEEEEEECCEEEEEECHHHHHEEECCCCCCCCCCCCCCCCCCCC
T ss_conf 99953762035057665305843685499950468854899979989999645764108655446766667656655678
Q ss_pred -----------CCEEE-------------------C--C-CCCCCCCCCCEECCCCCCCC----CCC---CCCC----CC
Q ss_conf -----------63010-------------------4--8-88731011430023322320----245---7877----88
Q 003498 404 -----------WSISI-------------------L--P-DCKNTVYNTARVGHQSTQMK----MTP---VPIH----GG 439 (815)
Q Consensus 404 -----------~svsi-------------------l--p-dc~~~~~nta~v~~q~~~~~----~~~---~~~~----~~ 439 (815)
||+|| + | +|++++||+++|.+|++... +.+ .... ..
T Consensus 558 ~~v~v~g~ylvrsasi~~~~l~l~gd~~~~t~~ev~~~p~~~~~v~~Ng~~v~~~~~~~g~~~~~~~~~~~~~~~P~l~~ 637 (971)
T 1tg7_A 558 SSIIVKAGYLVRSAYLDGNDLHIQADFNATTPIEVVGAPSGAKNLVINGKKTQTKVDKNGIWSASVAYTAPKVQLPSLKS 637 (971)
T ss_dssp TCCEEECSSEEEEEEEETTEEEEEEEBSSCEEEEEESCCTTCCEEEETTEEECCEECTTCCEEEEECCCCCCCCCCCGGG
T ss_pred CEEEEECCCEEEEEEEECCEEEEEEECCCCCEEEEEECCCCCCEEEECCEECEEEECCCCCEEEECCCCCCCCCCCCCCC
T ss_conf 51898667078999980988999852488822799856888668999998840577468618875477765424656677
Q ss_pred CCCCCCCC---CCCCCCCCCCCCCCHHHHHCC----C----CCCCCE------EEEEEEECCCCCCCCCCCCCCCEEEEC
Q ss_conf 77522447---786578988666611443158----8----999765------999997428999664457986528856
Q 003498 440 FSWQAFNE---VPSAYGDSSFTMSGLLEQINT----T----RDATDY------LWYMTDVKIDPSEGFLRSGNYPVLTVM 502 (815)
Q Consensus 440 ~~w~~~~e---~~~~~~~~~~~~~~~lEql~~----t----~d~sgY------lwY~T~i~~~~~~~~~~~g~~~~L~v~ 502 (815)
+.|+...| ..+.+++...+...+.|+.++ | ++.+|| +|||++|.+++++ ..|.++
T Consensus 638 l~Wk~~~~~pe~~~~~dDs~W~~~~l~~~~n~~~p~t~p~~~~~sdYGf~~G~lwYR~~F~~~~~~--------~~L~~~ 709 (971)
T 1tg7_A 638 LKWKSVDTLPEAKNTYDDSAWTSADHAYTNNSAHSLQTPTSLFASDYGYHTGALLFRGHFTANGKE--------KTFFVQ 709 (971)
T ss_dssp SCCEEEESCGGGSTTCCCTTSEECCCSSCCCTTCCCSSSSCCBGGGGTCCSSCEEEEEEEECCSCC--------CEEEEE
T ss_pred CCEEEECCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCC--------EEEEEE
T ss_conf 882895778434688887776589870213434778877667777668667429999899878860--------389997
Q ss_pred ---CCCEEEEEEECCEEEEEEECCCC--CCEEEEEEEEECCC-CCCEEEEEEECCCCCCC---CCCCCCCCCCCCCCEEE
Q ss_conf ---84629999999999999962358--88038973100147-76389999832587455---68988345421145898
Q 003498 503 ---SAGHALHVFVNGQLAGTAYGSLE--FPKLTFTEGVNMRA-GINKIALLSIAVGLPNV---GPHFETWNAGVLGPVTL 573 (815)
Q Consensus 503 ---~~~d~~~vfVNG~~vGs~~g~~~--~~~~~~~~~i~l~~-G~n~L~iL~e~~G~~Ny---G~~~~~~~kGI~G~V~L 573 (815)
+++|+++|||||+++|+..+... ..++.+.+ ..|+. |+|+|+|||+|||++|+ |++++++++||. +|+|
T Consensus 710 ~~gG~~~~~~VwvNG~~lGs~~g~~~~~~~~~~~~l-~~L~~gg~NvI~Vlvdn~G~~nsWy~G~~~~~~~~GI~-~v~L 787 (971)
T 1tg7_A 710 TKGGTAYGHSIWINETYVGSWAGTSINDNNNATYTL-PTLQSGKNYVITVVIDNMGLDEDWTIGSEDMKNPRGII-QYSL 787 (971)
T ss_dssp EECSTTCCEEEEETTEEEEEECCCTTCSEEEEEEEC-CCCCTTCEEEEEEEECCCCCCCCCSBTCCGGGCCCEEE-EEEE
T ss_pred ECCCCCCEEEEEECCEEEEEEECCCCCCCCCEEEEE-EEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCE-EEEE
T ss_conf 157654239999999997655467875567668998-67447995189999936777766566733012687624-8899
Q ss_pred CCCCCCC--CCCCCCCC--EE---------ECCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCEEEEEEEE--CCCC
Q ss_conf 5545876--35764883--79---------72788310113467899987556677346--7888439999997--8999
Q 003498 574 NGLNEGR--RDLSWQKW--TY---------KIGLEGEKLNLHSLSGGSSVEWAEGSLVA--QRQPLTWYRTTFS--APAG 636 (815)
Q Consensus 574 ~g~~~g~--~dLs~~~W--~y---------~vgL~GE~~~~~~~~~~~~~~W~~~~~~~--~~~~~twYkttF~--~p~g 636 (815)
.+.+.+. ++|+.+.| +| ++||.||++++|++ +.++..|.+.+..+ ...+++|||++|+ +|.|
T Consensus 788 ~g~~~~~~~w~l~g~~~ge~~~D~~RgplN~~GL~gE~~~w~~p-~~~~~~W~~~sp~~gl~~~Gv~wyr~~f~L~~p~g 866 (971)
T 1tg7_A 788 SGQEASAISWKLTGNLGGENYRDTVRGPLNEGGLYAERQGFHQP-QPPTQKWDSSSPFTGLTKPGIRFYSTSFDLDLPSG 866 (971)
T ss_dssp TTSCGGGCEEEEESSTTTTSCSCTTTCSSSCCSSHHHHTTTTSS-SCCCTTSBCCCTTTCBSSSEEEEEEEEEECCCCTT
T ss_pred ECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCC
T ss_conf 64579874499850556655554334544544443422253279-99834664878767888885089999974568778
Q ss_pred CC-CEEEECCCCC------EEEEEECCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC-CCC
Q ss_conf 99-6189608984------299999880011012565568988766666754643234779998424885287765-466
Q 003498 637 NA-PLALDMGSMG------KGQVWVNGQSIGRHWPAYKASGSCGYCSYTGTYTEKKCLSNCGEASQRWYHVPRSWL-KPT 708 (815)
Q Consensus 637 ~d-pv~Ldl~g~g------KG~vwVNG~~IGRYW~~~~~~G~~~~c~y~G~~~~~kc~~~cg~PqQtlYhVP~~~L-k~g 708 (815)
.| |+.|+|.+|+ ||++||||++|||||+.+ | || |+||||++|| |+|
T Consensus 867 ~d~pl~L~lg~~~~~~~~~~~~~~VNG~~iGry~~~~------------~-------------pq-r~y~VP~giLn~~G 920 (971)
T 1tg7_A 867 YDIPLYFNFGNSTSTPAAYRVQLYVNGYQYGKYVNNI------------G-------------PQ-TSFPVPEGILNYHG 920 (971)
T ss_dssp EECCEEEEECCCCSSCCCEEEEEEETTEEEEEEETTT------------C-------------SC-CEEEECBTTBCTTS
T ss_pred CCCEEEEECCCCCCCCCCCEEEEEECCEEEEEECCCC------------C-------------CC-EEEECCHHHHCCCC
T ss_conf 9830899857888777563289999999874012788------------7-------------87-79977979938699
Q ss_pred CCEEEE----EEECCCCCCCEEEEEEC
Q ss_conf 738999----96069999851997331
Q 003498 709 GNLLVV----FEEWGGNPNGISLVRRE 731 (815)
Q Consensus 709 ~N~LVi----fEe~gg~p~~I~~~t~~ 731 (815)
.|+|+| ||+.||+|.+|+|+++.
T Consensus 921 ~N~i~vrv~~~~~~Gg~~~~i~l~~~~ 947 (971)
T 1tg7_A 921 TNWLALSLWAQEDNGAKLDSFELINTT 947 (971)
T ss_dssp EEEEEEEEEECSTTCBCCSCEEEEECC
T ss_pred CCEEEEEEECCCCCCCCCCCEEEEECC
T ss_conf 638999986277778986506999750
No 4
>3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482}
Probab=1.00 E-value=1 Score=1086.57 Aligned_cols=564 Identities=30% Similarity=0.539 Sum_probs=471.0
Q ss_pred CEEEEECCCCEEECCEEEEEEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEECCCHHHHHHHHH
Q ss_conf 10199716729997969599999751999993237999999997899889973107766888960320351249999999
Q 003498 30 EGSVSYDSKAIAINGKRRILISGSIHYPRSSPEMWPDLIQKAKDGGLDVIQTYVFWNGHEPSPGKYYFEGNYDLVKFIKL 109 (815)
Q Consensus 30 ~~~v~~d~~~~~idG~~~~i~sG~~Hy~R~~~~~W~~~l~k~Ka~GlN~V~tyv~Wn~hEp~~G~ydF~G~~dL~~fi~l 109 (815)
...|++|++.|+|||||++++||++||+|+++++|+++|++||++|+|+|++||||+.|||+||+|||++..|+++||++
T Consensus 5 ~r~v~~~~~~f~lnGkp~~i~gg~~Hy~r~~~e~w~~dl~~mK~~G~N~Vrt~v~W~~hEP~~G~ydf~gl~~l~~fl~l 84 (612)
T 3d3a_A 5 EGTFEVGKNTFLLNGEPFVVKAAEIHYPRIPKEYWEHRIKMCKALGMNTICLYVFWNFHEPEEGRYDFAGQKDIAAFCRL 84 (612)
T ss_dssp CCCEEECSSSEEETTEEECCEEEEECGGGSCGGGHHHHHHHHHHHTCCEEEEECCHHHHCSSTTCCCCSGGGCHHHHHHH
T ss_pred CCEEEEECCEEEECCEEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEECCHHHHCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 66699839999999989999888826766998999999999997399899972707732898983480689899999999
Q ss_pred HHHCCCEEEEECCCEECCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCC
Q ss_conf 99849779972283001001889888613657991530699556999999999999998722222037985698514565
Q 003498 110 AKQAGLYVNLRIGPYVCAEWNFGGFPVWLKYIPGINFRTENGPFKAEMHKFTKKIVDMMKAERLFESQGGPIILSQIENE 189 (815)
Q Consensus 110 a~~~GL~vilr~GPyicaEw~~GG~P~WL~~~p~i~~Rt~d~~y~~~~~~~~~~i~~~i~~~~l~~~~gGpII~~QIENE 189 (815)
|+++||+||||+||||||||++||+|.||...+++.+|++|+.|++++++|+++|+++++ +++++|+|+|||||||||
T Consensus 85 a~e~GL~VIl~~gpyi~~ew~~gG~P~Wl~~~~~~~~r~~dp~y~~~~~~~~~~l~~r~~--~~~~~n~p~II~wqIeNE 162 (612)
T 3d3a_A 85 AQENGMYVIVRPGPYVCAEWEMGGLPWWLLKKKDIKLREQDPYYMERVKLFLNEVGKQLA--DLQISKGGNIIMVQVENE 162 (612)
T ss_dssp HHHTTCEEEEECCSCCCTTBGGGGCCGGGGGSTTCCSSSCCHHHHHHHHHHHHHHHHHHG--GGBGGGTSSEEEEECSSC
T ss_pred HHHCCCEEEEECCCCCCCCCCCCCCCHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHH--HHHHCCCCCEEEEEECCC
T ss_conf 997799999956854466011489735422478833437998999999999999999874--110006997778740344
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHCCC-CCCEEECCCC-----CCCCCCCCCCCCCCC-----CCCC---CCCCCCCCE
Q ss_conf 5675434598877889999999984599-7452651788-----999754227788655-----6679---899999906
Q 003498 190 YGPMEYEIGAPGRSYTRWAAKMAVGLGT-GVPWIMCKQD-----DAPDPLINTCNGFYC-----DYFS---PNKAYKPKM 255 (815)
Q Consensus 190 yg~~~~~~~~~~~~Y~~~l~~~~~~~g~-~vP~~~~~~~-----~~p~~vi~t~ng~~~-----~~f~---~~~p~~P~~ 255 (815)
||++ + .+++|++++++++++.|+ +||+++|+.. ...+.++.++| |.| +.|. +.+|++|.|
T Consensus 163 yg~y----g-~~~~y~~~l~~~l~~~g~~~vp~~~~~~~~~~~~~~~~~~~~t~n-f~s~~~~~~~~~~~~~~~p~~P~~ 236 (612)
T 3d3a_A 163 YGAF----G-IDKPYISEIRDMVKQAGFTGVPLFQCDWNSNFENNALDDLLWTIN-FGTGANIDEQFKRLKELRPDTPLM 236 (612)
T ss_dssp GGGT----C-CCHHHHHHHHHHHHHHTCCSSCEEEEECTTTGGGTCCTTSEEEEE-EETTCCHHHHHHHHHHHCTTSCCE
T ss_pred CCCC----C-CHHHHHHHHHHHHHHCCCCCHHHEECCCCCCCCCCCCCCCCCCCC-CCCCCCHHHHHHHHHHHCCCCCCE
T ss_conf 5655----7-659999999999987189960330004563222577787666455-677721789999998745589962
Q ss_pred EEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCCCCCC--C-C--CCCCCCCCCCCCCCCCC
Q ss_conf 53016523555489998899688999999999809801233154237897877999--9-6--33467789987767988
Q 003498 256 WTEAWTGWYTEFGGPVPHRPVEDLAFSVAKFIQKGGSFINYYMYHGGTNFGRTAGG--P-F--IATSYDYDAPLDEYGLL 330 (815)
Q Consensus 256 ~tE~~~Gwf~~wG~~~~~r~~ed~~~~v~~~~~~g~s~~N~YM~hGGTNfG~~~G~--~-~--~~TSYDYdApl~E~G~~ 330 (815)
++|||+|||++||++++.|++++++.++++++++|+| +||||||||||||+|+|+ + + ++|||||||||+|+|++
T Consensus 237 ~~E~~~Gwf~~wg~~~~~~~~~~~~~~~~~~l~~g~s-~n~YM~hGGTNfG~~~ga~~~~~~~~~tSYDy~Apl~E~g~~ 315 (612)
T 3d3a_A 237 CSEFWSGWFDHWGAKHETRSAEELVKGMKEMLDRNIS-FSLYMTHGGTSFGHWGGANFPNFSPTCTSYDYDAPINESGKV 315 (612)
T ss_dssp EEEEECSCCCBTTSCCCCCCHHHHHHHHHHHHTTTCE-EEEECSBCCBCCTTCBCEETTTTEEBCSBCCTTCSBCTTSCC
T ss_pred EECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC-EEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCC
T ss_conf 0023467650124777667999999999999986996-686353013477856666887766414531368724757873
Q ss_pred CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCEEECC
Q ss_conf 86137999999999874037767899832469996411352046530100011466510189848720026996301048
Q 003498 331 RQPKWGHLKDLHRAIKLCEPALVSGNPTVMPLGNYQEAHVFKSKSACAAFLANYNQRTFAKVAFGNQHYNLPPWSISILP 410 (815)
Q Consensus 331 ~~pKy~~lr~l~~~i~~~~~~l~~~~p~~~~~g~~~~~~~y~~~~~~~~fl~n~~~~~~~~v~f~~~~~~lp~~svsilp 410 (815)
+|||.++|+++.. + +..+.+.. +++.+.. .+.+|++++
T Consensus 316 -~~ky~~lr~~~~~---~---~~~~~~~~-------------------~~p~~~~------------~~~~~~~~~---- 353 (612)
T 3d3a_A 316 -TPKYLEVRNLLGN---Y---LPEGETLP-------------------EIPDSIP------------TIAIPTIKM---- 353 (612)
T ss_dssp -CHHHHHHHHHHTT---S---SCTTCCCC-------------------CCCCCCC------------BCCEEEEEC----
T ss_pred -CHHHHHHHHHHHH---H---CCCCCCCC-------------------CCCCCCC------------CCCCCCEEE----
T ss_conf -2789999999998---5---34677767-------------------7888876------------454565877----
Q ss_pred CCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEEEEEECCCCCCCC
Q ss_conf 88731011430023322320245787788775224477865789886666114431588999765999997428999664
Q 003498 411 DCKNTVYNTARVGHQSTQMKMTPVPIHGGFSWQAFNEVPSAYGDSSFTMSGLLEQINTTRDATDYLWYMTDVKIDPSEGF 490 (815)
Q Consensus 411 dc~~~~~nta~v~~q~~~~~~~~~~~~~~~~w~~~~e~~~~~~~~~~~~~~~lEql~~t~d~sgYlwY~T~i~~~~~~~~ 490 (815)
.++++ .|+.+.+++.+ ..+.+|||++| .+||+||||+++...
T Consensus 354 ------~~~~~-------------------l~~~~~~~~~~------~~p~~~E~l~q---~~gy~lY~t~i~~~~---- 395 (612)
T 3d3a_A 354 ------TEMAV-------------------LFDNLPHPKES------EDIRTMEAFDQ---GWGSILYRTSLSASD---- 395 (612)
T ss_dssp ------CEEEE-------------------GGGGCCCCEEE------SSCCBGGGGTC---CSSEEEEEEEECCBS----
T ss_pred ------EEEEE-------------------HHHHCCCCCCC------CCCCCHHHHCC---CCCEEEEEEEECCCC----
T ss_conf ------42615-------------------88847886347------89889999598---777599998854788----
Q ss_pred CCCCCCCEEEECCCCEEEEEEECCEEEEEEECCCCCCEEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCC
Q ss_conf 45798652885684629999999999999962358880389731001477638999983258745568988345421145
Q 003498 491 LRSGNYPVLTVMSAGHALHVFVNGQLAGTAYGSLEFPKLTFTEGVNMRAGINKIALLSIAVGLPNVGPHFETWNAGVLGP 570 (815)
Q Consensus 491 ~~~g~~~~L~v~~~~d~~~vfVNG~~vGs~~g~~~~~~~~~~~~i~l~~G~n~L~iL~e~~G~~NyG~~~~~~~kGI~G~ 570 (815)
..++|++.+++|++||||||+++|+.++......+.+ ++..|.|+|+||||||||+|||+++ +++|||+|+
T Consensus 396 ----~~~~L~i~~~~D~a~Vfvng~~~G~~~~~~~~~~~~~----~~~~~~~~L~iLven~Gr~NyG~~~-~~~kGi~g~ 466 (612)
T 3d3a_A 396 ----KEQTLLITEAHDWAQVFLNGKKLATLSRLKGEGVVKL----PPLKEGDRLDILVEAMGRMNFGKGI-YDWKGITEK 466 (612)
T ss_dssp ----SCEEEEEEEEESEEEEEETTEEEEEEETTTTCCEEEE----CCBCTTEEEEEEEECCCCCCSGGGG-CCCCEEEEE
T ss_pred ----CCCEEEECCCCEEEEEEECCEEEEEEECCCCCCEEEE----ECCCCCCEEEEEEEECCCCCCCCCC-CCCCCCCCC
T ss_conf ----8754985478708999999999999981147726986----5378985899999956987668545-579877762
Q ss_pred EEECCCCCCCCCCCCCCCE-EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEECCCCCE
Q ss_conf 8985545876357648837-972788310113467899987556677346788843999999789999961896089842
Q 003498 571 VTLNGLNEGRRDLSWQKWT-YKIGLEGEKLNLHSLSGGSSVEWAEGSLVAQRQPLTWYRTTFSAPAGNAPLALDMGSMGK 649 (815)
Q Consensus 571 V~L~g~~~g~~dLs~~~W~-y~vgL~GE~~~~~~~~~~~~~~W~~~~~~~~~~~~twYkttF~~p~g~dpv~Ldl~g~gK 649 (815)
|+|++ ++++.+|+ +|+ |+++|++|... .+.|...... .++|+|||++|++|++.| |||||+||||
T Consensus 467 V~l~~-~~~~~~l~--~W~~y~l~l~~~~~~--------~~~~~~~~~~--~~~p~~yk~~f~~~~~~D-t~Ld~~g~gK 532 (612)
T 3d3a_A 467 VELQS-DKGVELVK--DWQVYTIPVDYSFAR--------DKQYKQQENA--ENQPAYYRSTFNLNELGD-TFLNMMNWSK 532 (612)
T ss_dssp EEEEE-TTEEEECC--CEEEEEECCCHHHHH--------SSCCBC-------CCCEEEEEEEEESSCCB-EEEECTTCCE
T ss_pred EEECC-CCCCEECC--CCEEEEECCCCCCCC--------CCCCCCCCCC--CCCCEEEEEEEECCCCCC-EEEECCCCCC
T ss_conf 69858-86743436--866998346764222--------3553456777--889889999998899873-8996577873
Q ss_pred EEEEECCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCCEEEEE
Q ss_conf 99999880011012565568988766666754643234779998424885287765466738999960699998519973
Q 003498 650 GQVWVNGQSIGRHWPAYKASGSCGYCSYTGTYTEKKCLSNCGEASQRWYHVPRSWLKPTGNLLVVFEEWGGNPNGISLVR 729 (815)
Q Consensus 650 G~vwVNG~~IGRYW~~~~~~G~~~~c~y~G~~~~~kc~~~cg~PqQtlYhVP~~~Lk~g~N~LVifEe~gg~p~~I~~~t 729 (815)
|+|||||+||||||+ +| |||||| ||++|||+|+|+||||||+|..+..|.|.+
T Consensus 533 G~vwVNG~nlGRYW~-------------~G-------------PqqtlY-vP~~~Lk~g~N~ivvfE~~~~~~~~i~~~~ 585 (612)
T 3d3a_A 533 GMVWVNGHAIGRYWE-------------IG-------------PQQTLY-VPGCWLKKGENEIIILDMAGPSKAETEGLR 585 (612)
T ss_dssp EEEEETTEEEEEEET-------------TC-------------SCCEEE-ECGGGCCSEEEEEEEEESSCCSSSEEEEES
T ss_pred EEEEECCEEEEEEEE-------------CC-------------CEEEEE-ECHHHCCCCCCEEEEEEECCCCCCEEEEEC
T ss_conf 799998875890895-------------29-------------889988-158991789748999997689885488546
Q ss_pred ECH
Q ss_conf 310
Q 003498 730 REI 732 (815)
Q Consensus 730 ~~~ 732 (815)
..+
T Consensus 586 ~p~ 588 (612)
T 3d3a_A 586 QPI 588 (612)
T ss_dssp SCC
T ss_pred CCC
T ss_conf 655
No 5
>3og2_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family 35, glycoprot hydrolase; HET: NAG BMA MAN GLC; 1.20A {Trichoderma reesei} PDB: 3ogr_A* 3ogs_A* 3ogv_A*
Probab=1.00 E-value=1 Score=979.11 Aligned_cols=656 Identities=22% Similarity=0.363 Sum_probs=471.0
Q ss_pred CCEEEEECCCCEEECCEEEEEEEEEEECCCCC-CCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEECCCHHHHHHH
Q ss_conf 21019971672999796959999975199999-32379999999978998899731077668889603203512499999
Q 003498 29 VEGSVSYDSKAIAINGKRRILISGSIHYPRSS-PEMWPDLIQKAKDGGLDVIQTYVFWNGHEPSPGKYYFEGNYDLVKFI 107 (815)
Q Consensus 29 ~~~~v~~d~~~~~idG~~~~i~sG~~Hy~R~~-~~~W~~~l~k~Ka~GlN~V~tyv~Wn~hEp~~G~ydF~G~~dL~~fi 107 (815)
.+..|+||+++|+|||+|++++||+|||+|+| |++|+|+|+|||++|+|+|++|||||+|||+||+|||+|++||++||
T Consensus 22 ~~~~v~~d~~~~~idG~p~~i~sGeiHy~R~p~pe~W~d~l~kmKa~GlNtV~tYV~Wn~hEP~eG~fdFsg~~dL~~fl 101 (1003)
T 3og2_A 22 LQNIVTWDEHSLFVHGERVVIFSGEVHPFRLPVPSLYLDVFHKIKALGFNTVSFYVDWALLEGKPGRFRADGIFSLEPFF 101 (1003)
T ss_dssp SSSSEEECSSCEEETTEEECEEEEEECGGGCCCGGGHHHHHHHHHTTTCCEEEEECCHHHHCSBTTBCCCCGGGCSHHHH
T ss_pred CCCEEEECCCEEEECCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCEECCCCHHHHHHHH
T ss_conf 76169981886999997989999988875599889999999999973998899851644348978873555555599999
Q ss_pred HHHHHCCCEEEEECCCEECCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCC
Q ss_conf 99998497799722830010018898886136579915306995569999999999999987222220379856985145
Q 003498 108 KLAKQAGLYVNLRIGPYVCAEWNFGGFPVWLKYIPGINFRTENGPFKAEMHKFTKKIVDMMKAERLFESQGGPIILSQIE 187 (815)
Q Consensus 108 ~la~~~GL~vilr~GPyicaEw~~GG~P~WL~~~p~i~~Rt~d~~y~~~~~~~~~~i~~~i~~~~l~~~~gGpII~~QIE 187 (815)
++|+++||+|||||||||||||++||+|.||.+.|+ ++|++|+.|++++++|+++|+++++ ++++++||||||+|||
T Consensus 102 ~la~e~GL~VILRpGPYi~aEw~~GG~P~WL~~~~~-~lRt~~p~yl~~~~~~~~~l~~~~~--~~~~~~GGpII~~QVE 178 (1003)
T 3og2_A 102 EAATKAGIYLLARPGPYINAEVSGGGFPGWLQRVKG-KLRTDAPDYLHATDNYVAHIASIIA--KAQITNGGPVILYQPE 178 (1003)
T ss_dssp HHHHHHTCEEEEEEESCCCTTBGGGGCCGGGGGCCS-CTTSCCHHHHHHHHHHHHHHHHHHH--HTBGGGTSSEEEEEES
T ss_pred HHHHHCCCEEEECCCCCEEEECCCCCCCCHHCCCCC-EECCCCHHHHHHHHHHHHHHHHHHH--HHHCCCCCCEEEEECC
T ss_conf 999985998993278633335278876621025997-0057998999999999999999987--7642379978999724
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCC----CCCCCCCCC---------CCCCCCCCC---------
Q ss_conf 6556754345988778899999999845997452651788----999754227---------788655667---------
Q 003498 188 NEYGPMEYEIGAPGRSYTRWAAKMAVGLGTGVPWIMCKQD----DAPDPLINT---------CNGFYCDYF--------- 245 (815)
Q Consensus 188 NEyg~~~~~~~~~~~~Y~~~l~~~~~~~g~~vP~~~~~~~----~~p~~vi~t---------~ng~~~~~f--------- 245 (815)
||||++...+++++++||+||++|++++|++|||+||++. .+|+.++.+ +++++|+.+
T Consensus 179 NEYG~~~~~~~~~d~~Ym~~L~~~~~~~Gi~VPl~t~d~~~~~~~~~g~~~g~vdiyg~d~yp~g~~c~~~~~w~~~~~~ 258 (1003)
T 3og2_A 179 NEYSGAAEGVLFPNKPYMQYVIDQARNAGIIVPLINNDAFPGGTGAPGTGLGSVDIYGHDGYPLGFDCAHPSAWPDNGLP 258 (1003)
T ss_dssp SCCCCBCTTSCSSCHHHHHHHHHHHHHTTCCSCBBCCBSSSCCTTCTTSCTTCCSBCEEEECTTCSCTTSTTCCCTTCSC
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCH
T ss_conf 54575334456777899999999999749936799768852246577765551333024566674303687655555415
Q ss_pred -------CCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHH-----HHHHCCEEEEEEEEECCCCCCCCCCCCC
Q ss_conf -------9899999906530165235554899988996889999999-----9980980123315423789787799996
Q 003498 246 -------SPNKAYKPKMWTEAWTGWYTEFGGPVPHRPVEDLAFSVAK-----FIQKGGSFINYYMYHGGTNFGRTAGGPF 313 (815)
Q Consensus 246 -------~~~~p~~P~~~tE~~~Gwf~~wG~~~~~r~~ed~~~~v~~-----~~~~g~s~~N~YM~hGGTNfG~~~G~~~ 313 (815)
.+.+|++|+||+|||+|||++||++++.|++++++..+++ +++.|+|++||||||||||||+|+ ++.
T Consensus 259 ~~~~~~~~~~~p~~P~~~~Ef~~GWfd~WG~~~~~~~~~~~~~~~~~~~~~~~l~~G~s~vN~YM~hGGTNFG~~~-~~~ 337 (1003)
T 3og2_A 259 TTWRQDHLNISPSTPFSLVEFQGGAFDPFGGWGFEQCSALVNHEFERVFYKNNMAAGVTIFNIYMTFGGTNWGNLG-HPG 337 (1003)
T ss_dssp CCHHHHHHHHCTTSCCEEEEEESSCCCCTTCCCHHHHHHHSSHHHHHHHHHHHHHTTCSEEEEEEEECCBCCTTCB-CTT
T ss_pred HHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCC-CCC
T ss_conf 7799876512899982887001433343588877777334059999999999885688557888721646865357-998
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC---CCCCCCEEEEECCC-CEEEE--ECCCCCC
Q ss_conf 334677899877679888613799999999987403776789983246---99964113520465-30100--0114665
Q 003498 314 IATSYDYDAPLDEYGLLRQPKWGHLKDLHRAIKLCEPALVSGNPTVMP---LGNYQEAHVFKSKS-ACAAF--LANYNQR 387 (815)
Q Consensus 314 ~~TSYDYdApl~E~G~~~~pKy~~lr~l~~~i~~~~~~l~~~~p~~~~---~g~~~~~~~y~~~~-~~~~f--l~n~~~~ 387 (815)
++|||||||||+|+|++++|||.+||.+|.|++.+.. ++..+|...+ ..++....++.-.. ..+.| +.+.+..
T Consensus 338 ~~TSYDYdAPL~E~G~~~t~Ky~~lK~l~~fl~~~~~-~l~~~~~~~~~~~~~~~~~i~~t~lr~~~~~~Fyvvrh~~~~ 416 (1003)
T 3og2_A 338 GYTSYDYGASIREDRRIDREKYSELKLQGQFLKVSPG-YITATPENATQGVYSDSQNIVITPLLAKESGDFFVVRHANYS 416 (1003)
T ss_dssp SCSBCCTTCSBCTTCCCCSHHHHHHHHHHHHHHTCTH-HHHSEECCCBSSSSSSCSSEEEEEEECSSSCEEEEEEESSTT
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHH-HHCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCC
T ss_conf 4133467884464677583478999999998753837-645564658876134898638999864898559999815788
Q ss_pred C----EEEEEEC--CCCCCCC---------CCCEEECC------------------------------------------
Q ss_conf 1----0189848--7200269---------96301048------------------------------------------
Q 003498 388 T----FAKVAFG--NQHYNLP---------PWSISILP------------------------------------------ 410 (815)
Q Consensus 388 ~----~~~v~f~--~~~~~lp---------~~svsilp------------------------------------------ 410 (815)
+ ..++... .+.+.+| .....|++
T Consensus 417 s~~~~~~~l~l~ts~G~~tiP~~~g~ltL~grdskI~vtdy~~g~~~L~YSTAevlT~~~~~~~~vlvlyg~~Ge~~E~a 496 (1003)
T 3og2_A 417 STDTASYTVKLPTSAGDLTIPQLGGSLTLTGRDSKIHVTDYPVGKFTLLYSTAEIFTWNEFAEKTVLVLYGGAQELHEFA 496 (1003)
T ss_dssp CCSCEEECEEECCTTCCEEECTTSCCEEECTTCEEEEEEEEEETTEEEEEESSEEEEEEECSSCEEEEEEECTTCEEEEE
T ss_pred CCCCCEEEEEECCCCCCEEECCCCCEEEECCCCCEEEEECCCCCCEEEEEECCCEEEEEEECCEEEEEEECCCCCCEEEE
T ss_conf 77761289994278876786788972788886555985013248848999724117889989988999978899834899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003498 411 -------------------------------------------------------------------------------- 410 (815)
Q Consensus 411 -------------------------------------------------------------------------------- 410 (815)
T Consensus 497 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~l~v~l~dr~~A~~~W~~~~~~~~~~~~~~~~~ 576 (1003)
T 3og2_A 497 VKNPFGSSKTAKAKKIEGSNVTIHTTSNLTVVLQWTASSARQVVQLGSLVIYMVDRNSAYNYWVPTLPGSGKQSAYGSSL 576 (1003)
T ss_dssp ESCCSTTCSSCCCEEEECSSCEEEECTTCCEEEEEECCSSCEEEEETTEEEEEEEHHHHTTEECCBCCCSSTTGGGCSCS
T ss_pred EECCCCCCCCCCCCEECCCCEEEEECCCCEEEEEEECCCCEEEEEECCEEEEEEEHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf 93344445678873642787058746895899988537964999979999999706887641355346887645434567
Q ss_pred -------------------------------------------CCCCCCCCCCEECCCCCCC-------CCCCC--CCC-
Q ss_conf -------------------------------------------8873101143002332232-------02457--877-
Q 003498 411 -------------------------------------------DCKNTVYNTARVGHQSTQM-------KMTPV--PIH- 437 (815)
Q Consensus 411 -------------------------------------------dc~~~~~nta~v~~q~~~~-------~~~~~--~~~- 437 (815)
..+++.+|-.+|....+.. ...+. ..+
T Consensus 577 ~~~~~vlV~g~yLvRsA~~~g~~l~l~GD~~~tt~lev~~~p~~v~~v~wNG~~~~~~~~~~g~~~~~~~~~~~~i~lP~ 656 (1003)
T 3og2_A 577 MNPDSVIINGGYLIRSVAIKGNALSVQADFNVTTPLEIIGIPKGISKLAVNGKELGYSVSELGDWIAHPAIEIPHVQVPE 656 (1003)
T ss_dssp SSCCBCEEECCSEEEEEEEETTEEEEEEEBSSCCCEEEESCCTTCCEEEETTEEECCEECTTSCEEECCCCCCCCCCCCC
T ss_pred CCCCCEEEECCEEEEEEEECCCEEEEEEECCCCCEEEEEECCCCCCEEEECCEECEEEECCCCCEEEEECCCCCCCCCCC
T ss_conf 88872899788379998971999999843589813799936877548999999851486378757998327787654887
Q ss_pred -CCCCCCC---CCCCCCCCCCC---------------CCCCC--CHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCC
Q ss_conf -8877522---44778657898---------------86666--114431588999765999997428999664457986
Q 003498 438 -GGFSWQA---FNEVPSAYGDS---------------SFTMS--GLLEQINTTRDATDYLWYMTDVKIDPSEGFLRSGNY 496 (815)
Q Consensus 438 -~~~~w~~---~~e~~~~~~~~---------------~~~~~--~~lEql~~t~d~sgYlwY~T~i~~~~~~~~~~~g~~ 496 (815)
..+.|.. ++|-.+.+++. |+..+ ....+++. ++|.+|||.+|..++.+ +.
T Consensus 657 L~~l~Wk~~dslPE~~~~ydDs~W~~A~~~~t~n~~~p~~~p~~Lya~dYGf---h~G~~wYRG~F~a~~~~------~~ 727 (1003)
T 3og2_A 657 LTKLKWYKVDSLPEIRSNYDDSRWPLANLRTSNNTYAPLKTPVSLYGSDYGF---HAGTLLFRGRFTARTAR------QQ 727 (1003)
T ss_dssp GGGSCCEEEESCGGGSTTCCCTTSCBCCCSCCCCSSSCCCSSSCCBGGGGTC---CSSCEEEEEEEECSSSS------EE
T ss_pred CCCCCEEECCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCEEECCCCCC---CCCCEEEEEEEECCCCC------EE
T ss_conf 7888714227886568999843260667656568556789984757645676---44878986189778871------48
Q ss_pred CEEEECC-CCEEEEEEECCEEEEEEECCCCC--CEEEEEEEEECCCC-CCEEEEEEECCCCC-CC--CCCCCCCCCCCCC
Q ss_conf 5288568-46299999999999999623588--80389731001477-63899998325874-55--6898834542114
Q 003498 497 PVLTVMS-AGHALHVFVNGQLAGTAYGSLEF--PKLTFTEGVNMRAG-INKIALLSIAVGLP-NV--GPHFETWNAGVLG 569 (815)
Q Consensus 497 ~~L~v~~-~~d~~~vfVNG~~vGs~~g~~~~--~~~~~~~~i~l~~G-~n~L~iL~e~~G~~-Ny--G~~~~~~~kGI~G 569 (815)
..|.+++ .+....|||||+|+|+..|.... .+++|.+|. |+.| +|+|+++++|||+. |+ |..-.+.++||++
T Consensus 728 v~L~~~GG~af~~sVWLNG~flGs~~g~g~~~~~~~~~~lP~-L~~g~~NVLtV~vDn~G~d~~w~~G~d~~k~PRGi~~ 806 (1003)
T 3og2_A 728 LFLSTQGGSAFASSVWLNDRFIGSFTGFDAASAANSSYTLDR-LVRGRRYILTVVVDSTGLDENWTTGDDSMKAPRGILD 806 (1003)
T ss_dssp EEEEEECSTTCCEEEEETTEEEEEECCCTTCSEEEEEEEECS-CCTTCEEEEEEEECCCCCCCCCSBTCCGGGCCCEEEE
T ss_pred EEEEECCCCCCCCEEEECCEEECCCCCCCCCCCCCEEEECCC-CCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEE
T ss_conf 999981512434489999978225547886565666997875-5679960899999288765564667554448875000
Q ss_pred CEEECCCCCCCCCCCCCCCEEECCCCC------------------CCCCCCCCCCCCCCCCCCC--------CCC--CCC
Q ss_conf 589855458763576488379727883------------------1011346789998755667--------734--678
Q 003498 570 PVTLNGLNEGRRDLSWQKWTYKIGLEG------------------EKLNLHSLSGGSSVEWAEG--------SLV--AQR 621 (815)
Q Consensus 570 ~V~L~g~~~g~~dLs~~~W~y~vgL~G------------------E~~~~~~~~~~~~~~W~~~--------~~~--~~~ 621 (815)
.+|.|......+ ..|+.|..+.| ||.++|+| +.++..|.+. ++. ...
T Consensus 807 -~~l~g~~~~~~~---~~Wki~Gn~GGe~~~D~vRGplNeGGly~ER~GwHLP-g~~~~~W~~~~~~~~~~~sp~~g~~~ 881 (1003)
T 3og2_A 807 -YALTSSSGANVS---ISWKLTGNLGGEDYRDVFRGPLNEGGLFFERQGFHLP-SPPLSDFTHGPSSSSSSSSPLDGIAH 881 (1003)
T ss_dssp -EEEEETTSCBCC---CEEEEESSTTTTSCSCTTTCSSSCCSSHHHHHTTTSS-SCCGGGSBCCCTTSTTCCCTTTCBSS
T ss_pred -EECCCCCCCCCC---CEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf -052378877663---0589841358865678665665588655774132389-88943233244454456784557788
Q ss_pred CCCEEEEEEEEC--C-CCCC-CEEEECCC-----CCEEEEEECCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 884399999978--9-9999-61896089-----8429999988001101256556898876666675464323477999
Q 003498 622 QPLTWYRTTFSA--P-AGNA-PLALDMGS-----MGKGQVWVNGQSIGRHWPAYKASGSCGYCSYTGTYTEKKCLSNCGE 692 (815)
Q Consensus 622 ~~~twYkttF~~--p-~g~d-pv~Ldl~g-----~gKG~vwVNG~~IGRYW~~~~~~G~~~~c~y~G~~~~~kc~~~cg~ 692 (815)
.+.+||||+|++ | +|.| |+.|.+.. -.|.++||||+++|||-+. +|
T Consensus 882 ~Gv~fyrt~f~LdlP~~g~Dvpl~~~f~~~~~~~~yRa~lfVNG~q~Gkyv~~------------iG------------- 936 (1003)
T 3og2_A 882 AGIAFYAAKLPLHLPAQEYDIPLSFVFDNATAAAPYRALLYVNGFQYGKYVSN------------IG------------- 936 (1003)
T ss_dssp SEEEEEEEEEEEECCTTTEECCEEEEECCCSSCCCEEEEEEETTEEEEEEETT------------TC-------------
T ss_pred CCEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCEEEEEEEECEEEEEECCC------------CC-------------
T ss_conf 84579987852689965671038999777988763589999702021022178------------78-------------
Q ss_pred CCEEEEECCCCCCC-CCCCEEEE----EEECCCCCCCEEEEEE
Q ss_conf 84248852877654-66738999----9606999985199733
Q 003498 693 ASQRWYHVPRSWLK-PTGNLLVV----FEEWGGNPNGISLVRR 730 (815)
Q Consensus 693 PqQtlYhVP~~~Lk-~g~N~LVi----fEe~gg~p~~I~~~t~ 730 (815)
||.+ |+||.++|+ .|.|+|.| +|+.|+.+..++++..
T Consensus 937 PQt~-FpvP~GILn~~G~NtialalWa~~~~ga~~~~~~L~~~ 978 (1003)
T 3og2_A 937 PQTE-FPVPEGILDYNGDNWIGVALWALESRGAKVPGLALKSK 978 (1003)
T ss_dssp CCCE-EEECBTTBCTEEEEEEEEEEEECSTTCBCCSCEEEEEC
T ss_pred CCCE-ECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEC
T ss_conf 8603-05992011279962699999842688887771599974
No 6
>3u7v_A Beta-galactosidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel, glyco_hydro_42; HET: MSE; 1.80A {Caulobacter crescentus}
Probab=1.00 E-value=1 Score=315.28 Aligned_cols=199 Identities=19% Similarity=0.261 Sum_probs=156.2
Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCCC----CCCEEEEECCCCEEECCEEEEEEEEEEECCCCCCCCHHHHHHHHHHCCC
Q ss_conf 943000002368999999872377785----3210199716729997969599999751999993237999999997899
Q 003498 1 MGMTKQLGMCNVLLILLLGCSGLFAPV----EVEGSVSYDSKAIAINGKRRILISGSIHYPRSSPEMWPDLIQKAKDGGL 76 (815)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~v~~d~~~~~idG~~~~i~sG~~Hy~R~~~~~W~~~l~k~Ka~Gl 76 (815)
|||..--+-.-++|++++...+..+.+ .....++.|+.+|++||||++++||++|+++..+..+++++++||++|+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~~~~~~f~lnGkPf~i~gg~~H~~~~y~r~~~~~W~~mKa~G~ 87 (552)
T 3u7v_A 8 MGMSRFATAVGLALALVCGPLASGAHAADAAMPQLVTKDGRHALMVDGAPFLMLAAQVNNSSAWPSQMAKVWPAIEKVGA 87 (552)
T ss_dssp ----------------------------CCCCCEEEEETTEEEEEETTEEECEEEEECCTTCCSGGGHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCEEEEEECCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCC
T ss_conf 53578999999999999600000134554569829997896889899989999988707988863311999999998099
Q ss_pred CEEEECCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEECCCEECCCCCCCC---CCCCCCCCCCE--EEECCC-
Q ss_conf 889973107766888960320351249999999998497799722830010018898---88613657991--530699-
Q 003498 77 DVIQTYVFWNGHEPSPGKYYFEGNYDLVKFIKLAKQAGLYVNLRIGPYVCAEWNFGG---FPVWLKYIPGI--NFRTEN- 150 (815)
Q Consensus 77 N~V~tyv~Wn~hEp~~G~ydF~G~~dL~~fi~la~~~GL~vilr~GPyicaEw~~GG---~P~WL~~~p~i--~~Rt~d- 150 (815)
|+|++||+|+.|||+||+|||+ .|++||++|+++||+|||| ||+||++|| +|.||.++|++ ++|+.|
T Consensus 88 NtVr~~V~W~~hEP~~G~yDF~---~LD~~ldla~e~GL~VIL~----i~aeW~~ggta~~P~WL~~d~~~~P~vrt~dG 160 (552)
T 3u7v_A 88 NTVQVPIAWEQIEPVEGQFDFS---YLDLLLEQARERKVRLVLL----WFGTWKNSSPSYAPEWVKLDDKRFPRLIKDDG 160 (552)
T ss_dssp SEEEEEEEHHHHCSBTTBCCCH---HHHHHHHHHHHTTCEEEEE----EEEEEETTBCTTSCHHHHTCTTTSCEEECTTS
T ss_pred CEEEEEEHHHCCCCCCCCCCHH---HHHHHHHHHHHCCCEEEEE----ECCCCCCCCCCCCCCHHHCCCCCCCEEECCCC
T ss_conf 8899986243248989846806---4999999999879999998----41201468876788056517665752488999
Q ss_pred ----------HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf ----------5569999999999999987222220379856985145655675434598877889999999984
Q 003498 151 ----------GPFKAEMHKFTKKIVDMMKAERLFESQGGPIILSQIENEYGPMEYEIGAPGRSYTRWAAKMAVG 214 (815)
Q Consensus 151 ----------~~y~~~~~~~~~~i~~~i~~~~l~~~~gGpII~~QIENEyg~~~~~~~~~~~~Y~~~l~~~~~~ 214 (815)
+.|++++++|+++|++++++ .+ .++|||||||||||||++. +++.|++.++++++.
T Consensus 161 ~~~~~~sp~~p~yl~a~r~~~~~l~~~La~--r~-~~~p~VI~wQIeNEyG~~g-----~~~~Y~~~~~~aFR~ 226 (552)
T 3u7v_A 161 ERSYSMSPLAKSTLDADRKAFVALMTHLKA--KD-AAQKTVIMVQVENETGTYG-----SVRDFGPAAQKVFNG 226 (552)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHHHHHHHHH--HH-TTTCCEEEEEEEESCSBSS-----CSSCCSHHHHHHHHS
T ss_pred CEEECCCCCCHHHHHHHHHHHHHHHHHHHH--HH-CCCCCEEEEEECCCCCCCC-----CCCHHHHHHHHHHHH
T ss_conf 675147988678999999999999999999--71-8999489999615677777-----732151999999998
No 7
>1vem_A Beta-amylase; beta-alpha-barrels, optimum PH, hydrolase; HET: GLC; 1.85A {Bacillus cereus} SCOP: b.3.1.1 c.1.8.1 PDB: 1b90_A* 1j0y_A* 1j0z_A* 1j10_A* 1b9z_A* 1j12_A* 1j18_A* 1j11_A* 5bca_A 1veo_A* 1itc_A* 1ven_A* 1vep_A* 1cqy_A
Probab=1.00 E-value=1 Score=212.00 Aligned_cols=244 Identities=11% Similarity=0.038 Sum_probs=155.5
Q ss_pred EEEEEEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCC-CCEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Q ss_conf 69599999751999993237999999997899889973107766888-96032035124999999999849779972283
Q 003498 45 KRRILISGSIHYPRSSPEMWPDLIQKAKDGGLDVIQTYVFWNGHEPS-PGKYYFEGNYDLVKFIKLAKQAGLYVNLRIGP 123 (815)
Q Consensus 45 ~~~~i~sG~~Hy~R~~~~~W~~~l~k~Ka~GlN~V~tyv~Wn~hEp~-~G~ydF~G~~dL~~fi~la~~~GL~vilr~GP 123 (815)
..+.++.++.+....+++.|+++|++||++|+|+|+++|.|+.|||+ ||+|||+ .++++|++|+++||+||+++++
T Consensus 12 ~~~vmlp~~~v~~~~~~~~w~~dl~~mk~~Gln~Vr~~V~W~~iEP~g~G~ydf~---~~d~~id~a~~~GL~viv~L~~ 88 (516)
T 1vem_A 12 KAYLMAPLKKIPEVTNWETFENDLRWAKQNGFYAITVDFWWGDMEKNGDQQFDFS---YAQRFAQSVKNAGMKMIPIIST 88 (516)
T ss_dssp EEEEECCSSCGGGTSCHHHHHHHHHHHHHTTEEEEEEEEEHHHHTCSSTTCCCCH---HHHHHHHHHHHTTCEEEEEEEC
T ss_pred CEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCCCCHH---HHHHHHHHHHHCCCEEEEEECC
T ss_conf 7499805655289999999999999999739999998423454138899936369---9999999999779989999311
Q ss_pred EECCC----CCCCCCCCCCCCC-C--CEEEECCC----HHH-----HHHHHHHHHHHHHHHHHCCCCCCCCCCEEE----
Q ss_conf 00100----1889888613657-9--91530699----556-----999999999999998722222037985698----
Q 003498 124 YVCAE----WNFGGFPVWLKYI-P--GINFRTEN----GPF-----KAEMHKFTKKIVDMMKAERLFESQGGPIIL---- 183 (815)
Q Consensus 124 yicaE----w~~GG~P~WL~~~-p--~i~~Rt~d----~~y-----~~~~~~~~~~i~~~i~~~~l~~~~gGpII~---- 183 (815)
|+|+| |.++++|.||.+. | ++.+++.+ +.+ -......++.+++.++ +.+... ++||+
T Consensus 89 h~c~g~~g~~~~~~lP~WL~~~~p~~di~~~d~~G~~~~~~~~~~~~~~~~~~y~~~~~~la--~r~~~~-~~vI~eI~v 165 (516)
T 1vem_A 89 HQCGGNVGDDCNVPIPSWVWNQKSDDSLYFKSETGTVNKETLNPLASDVIRKEYGELYTAFA--AAMKPY-KDVIAKIYL 165 (516)
T ss_dssp SCBSSSTTCCCCBCCCGGGGGGCSSSCSSEECTTCCEECSSCCTTCHHHHHHHHHHHHHHHH--HHTGGG-GGGBCCEEE
T ss_pred CCCCCCCCCCCCCCCCHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH--HHHCCC-CCEEEEEEC
T ss_conf 01377767787789997787259964326688999898453542346763899999999999--997438-998999622
Q ss_pred ------------ECCCCCCCCCCC-CCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCC-C
Q ss_conf ------------514565567543-45988778899999999845997452651788999754227788655667989-9
Q 003498 184 ------------SQIENEYGPMEY-EIGAPGRSYTRWAAKMAVGLGTGVPWIMCKQDDAPDPLINTCNGFYCDYFSPN-K 249 (815)
Q Consensus 184 ------------~QIENEyg~~~~-~~~~~~~~Y~~~l~~~~~~~g~~vP~~~~~~~~~p~~vi~t~ng~~~~~f~~~-~ 249 (815)
+|||||||.... .+..-++.+++.+++.+++..-.++-.. ....+ . ..+|... .
T Consensus 166 glG~~GelryPs~qv~NE~g~~g~~~~~~y~~~~~~~fr~~l~~~ygtl~~ln--------~aWg~--~--~~~~~~i~~ 233 (516)
T 1vem_A 166 SGGPAGELRYPSYTTSDGTGYPSRGKFQAYTEFAKSKFRLWVLNKYGSLNEVN--------KAWGT--K--LISELAILP 233 (516)
T ss_dssp CCSGGGBSSCCCCCTTTTCCTTSCCCCCCCSHHHHHHHHHHHHHHHSSHHHHH--------HHHTC--C--CSSGGGCCS
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHCCCHHHHH--------HHHCC--C--CCCHHHHCC
T ss_conf 45534543565543335767877654200489999999999998628777788--------97687--9--788988278
Q ss_pred CCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEE------EEEEEEECCCCCCCC
Q ss_conf 99990653016523555489998899688999999999809801------233154237897877
Q 003498 250 AYKPKMWTEAWTGWYTEFGGPVPHRPVEDLAFSVAKFIQKGGSF------INYYMYHGGTNFGRT 308 (815)
Q Consensus 250 p~~P~~~tE~~~Gwf~~wG~~~~~r~~ed~~~~v~~~~~~g~s~------~N~YM~hGGTNfG~~ 308 (815)
|..+ ..+++.||+++||.......++.++....++++.+.+. +.+..--.|.+|-+.
T Consensus 234 P~~~--~~~~~~gw~s~~~~df~~f~s~~l~~~~~~~l~~a~~~f~~~~~~~~~~kv~g~hw~y~ 296 (516)
T 1vem_A 234 PSDG--EQFLMNGYLSMYGKDYLEWYQGILENHTKLIGELAHNAFDTTFQVPIGAKIAGVHWQYN 296 (516)
T ss_dssp CSCH--HHHHHTGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCEEEEECCCCTTTT
T ss_pred CCCC--CCCCCCCCHHHHCCHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEECCC
T ss_conf 6556--54357983366507298856378999999999987875488768428998474201688
No 8
>3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A*
Probab=1.00 E-value=1 Score=209.17 Aligned_cols=284 Identities=17% Similarity=0.231 Sum_probs=192.0
Q ss_pred EEEEEEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEECC-CCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Q ss_conf 695999997519999932379999999978998899731-0776688896032035124999999999849779972283
Q 003498 45 KRRILISGSIHYPRSSPEMWPDLIQKAKDGGLDVIQTYV-FWNGHEPSPGKYYFEGNYDLVKFIKLAKQAGLYVNLRIGP 123 (815)
Q Consensus 45 ~~~~i~sG~~Hy~R~~~~~W~~~l~k~Ka~GlN~V~tyv-~Wn~hEp~~G~ydF~G~~dL~~fi~la~~~GL~vilr~GP 123 (815)
.+.++++|++|+.+++++.|+++|++||++|+|+|++++ .|+.+||++|+|||+ +|+++|++|+++||+|||++++
T Consensus 6 ~~~~~~G~~y~pe~w~~~~~~~Dl~~mk~~G~n~vr~~if~W~~~eP~~g~~~f~---~ld~~i~~~~~~Gi~vil~~~~ 82 (675)
T 3tty_A 6 FPKIWYGGDYNPEQWDKATMEEDMRMFNLAGIDVATVNVFSWAKIQRDEVSYDFT---WLDDIIERLTKENIYLCLATST 82 (675)
T ss_dssp SCSCEEEEECCGGGSCHHHHHHHHHHHHHHTCCEEEECSSCHHHHBSSSSCBCCH---HHHHHHHHHHHTTCEEEEECCT
T ss_pred CCCCEEEEECCHHHCCHHHHHHHHHHHHHCCCCEEEEEEECHHHHCCCCCCCCHH---HHHHHHHHHHHCCCEEEEECCC
T ss_conf 8876570057916499899999999999739988999411244218769863889---9999999999879999996787
Q ss_pred EECCCCCCCCCCCCCCCCC-CE--------EEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCC
Q ss_conf 0010018898886136579-91--------53069955699999999999999872222203798569851456556754
Q 003498 124 YVCAEWNFGGFPVWLKYIP-GI--------NFRTENGPFKAEMHKFTKKIVDMMKAERLFESQGGPIILSQIENEYGPME 194 (815)
Q Consensus 124 yicaEw~~GG~P~WL~~~p-~i--------~~Rt~d~~y~~~~~~~~~~i~~~i~~~~l~~~~gGpII~~QIENEyg~~~ 194 (815)
+.+.+|-....|.||.... +. ....++|.|++++.+++++|+++++++ ++||+|||+|||++.+
T Consensus 83 ~~~P~Wl~~~~Pe~l~~d~~G~~~~~g~r~~~~~~~p~~~~~~~~~~~~l~~ry~~~-------p~Vi~w~v~NE~g~~~ 155 (675)
T 3tty_A 83 GAHPAWMAKKYPDVLRVDYEGRKRKFGGRHNSCPNSPTYRKYAKILAGKLAERYKDH-------PQIVMWHVSNEYGGYC 155 (675)
T ss_dssp TSCCHHHHHHCGGGBCBCTTSCBCCSCSSSCBCTTCHHHHHHHHHHHHHHHHHTTTC-------TTEEEEECSSSCCCCC
T ss_pred CCCCHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC-------CCEEEEEECCCCCCCC
T ss_conf 778733443387515666899680368756789999999999999999999973889-------9689999756667876
Q ss_pred CCCCCCCHHHHHHHHHHHHH-------CCC-------------CCCEEEC---------CC-------------------
Q ss_conf 34598877889999999984-------599-------------7452651---------78-------------------
Q 003498 195 YEIGAPGRSYTRWAAKMAVG-------LGT-------------GVPWIMC---------KQ------------------- 226 (815)
Q Consensus 195 ~~~~~~~~~Y~~~l~~~~~~-------~g~-------------~vP~~~~---------~~------------------- 226 (815)
.+..+.++|.+||++++.. -|+ ..|-.+. ..
T Consensus 156 -y~~~~~~~Fr~wLk~kY~ti~~LN~aWgt~fWs~~y~~w~ei~~P~~~~~~~~~~~~~~p~~~lD~~rF~~~~~~~~~~ 234 (675)
T 3tty_A 156 -YCDNCEKQFRVWLKERYGTLEALNKAWNTSFWSHTFYDWDEIVAPNALSEEWSGNRTNFQGISLDYRRFQSDSLLECFK 234 (675)
T ss_dssp -CSHHHHHHHHHHHHHHHSSHHHHHHHTTTTGGGCCCSSGGGCCCCSTTTTEETTTEESCHHHHHHHHHHHHHHHHHHHH
T ss_pred -CCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf -8989999999999988657999999867552357557798716985656554445667858999999999999999999
Q ss_pred -------CCCCC-CCCCCCC--CCC-C---------------CCCC-----------------CCCCCCCCEEEECCCCC
Q ss_conf -------89997-5422778--865-5---------------6679-----------------89999990653016523
Q 003498 227 -------DDAPD-PLINTCN--GFY-C---------------DYFS-----------------PNKAYKPKMWTEAWTGW 263 (815)
Q Consensus 227 -------~~~p~-~vi~t~n--g~~-~---------------~~f~-----------------~~~p~~P~~~tE~~~Gw 263 (815)
...|+ +| |.| +.. . |.+. .....+|.+.+|..+|
T Consensus 235 ~~~d~iR~~~P~~pv--t~N~~~~~~~~D~~~~a~~~Dvvs~D~Yp~~~~~~~~~a~~~dl~R~~~~g~p~~~mE~~~~- 311 (675)
T 3tty_A 235 MERDELKRWTPDIPV--TTNLMGFYPELDYFKWAKEMDVVSWDNYPSMDTPFSFTAMAHNLMRGLKSGQPFMLMEQTPG- 311 (675)
T ss_dssp HHHHHHHHHCTTSCE--ECEECTTCTTSCHHHHHTTCSSCEEECCCCTTSCHHHHHHHHHHHHHTTTTCCEEEEECCSS-
T ss_pred HHHHHHHHHCCCCCE--EECCCCCCCCCCHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCC-
T ss_conf 999999975899877--97626566776999996159899977888867888899989988876047998699657778-
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 55548999889968899999999980980123315423789787799996334677899877679888613799999999
Q 003498 264 YTEFGGPVPHRPVEDLAFSVAKFIQKGGSFINYYMYHGGTNFGRTAGGPFIATSYDYDAPLDEYGLLRQPKWGHLKDLHR 343 (815)
Q Consensus 264 f~~wG~~~~~r~~ed~~~~v~~~~~~g~s~~N~YM~hGGTNfG~~~G~~~~~TSYDYdApl~E~G~~~~pKy~~lr~l~~ 343 (815)
...|..-.....+..+.......++.|+..+.|+-++... +..-.| -.|.|+-.|.+.++.|.+++++..
T Consensus 312 ~~~w~~~~~~~~pg~~r~~~~~~~A~Ga~~v~~f~wr~~~---------~g~E~~-h~g~~~~~g~~~~r~~~ev~~~~~ 381 (675)
T 3tty_A 312 VQNWQPYNSAKRPGVMRLWSYQAVAHGADTVMFFQLRRSV---------GACEKY-HGAVIEHVGHEHTRVFRECAELGK 381 (675)
T ss_dssp CCTTSSBCCCCCTTHHHHHHHHHHHTTEEEEEESCSBCCC---------SGGGTT-SCCSBCTTCSSCSHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCC---------CCHHHH-HCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 8888577888995099999999985625767634116888---------855665-026458789988469999999999
Q ss_pred HHHHHCCCC
Q ss_conf 987403776
Q 003498 344 AIKLCEPAL 352 (815)
Q Consensus 344 ~i~~~~~~l 352 (815)
.++..++.+
T Consensus 382 ~l~~l~~~~ 390 (675)
T 3tty_A 382 ELQQLGDTI 390 (675)
T ss_dssp HHHHHTTTT
T ss_pred HHHHHHHHH
T ss_conf 999756664
No 9
>1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A*
Probab=1.00 E-value=1 Score=203.84 Aligned_cols=270 Identities=14% Similarity=0.153 Sum_probs=188.1
Q ss_pred EEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEECC-CCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEECCCEECC
Q ss_conf 99997519999932379999999978998899731-07766888960320351249999999998497799722830010
Q 003498 49 LISGSIHYPRSSPEMWPDLIQKAKDGGLDVIQTYV-FWNGHEPSPGKYYFEGNYDLVKFIKLAKQAGLYVNLRIGPYVCA 127 (815)
Q Consensus 49 i~sG~~Hy~R~~~~~W~~~l~k~Ka~GlN~V~tyv-~Wn~hEp~~G~ydF~G~~dL~~fi~la~~~GL~vilr~GPyica 127 (815)
++++.+|+.+++++.|++++++||++|+|+|++++ .|+.+||+||+|||+ +|+++|++|+++||+||+++.
T Consensus 1 ~~G~~y~pe~w~~~~~~~dl~~mk~~G~N~vR~~if~W~~~eP~~g~~d~~---~ld~~ld~a~~~Gi~vil~~~----- 72 (645)
T 1kwg_A 1 MLGVCYYPEHWPKERWKEDARRMREAGLSHVRIGEFAWALLEPEPGRLEWG---WLDEAIATLAAEGLKVVLGTP----- 72 (645)
T ss_dssp CEEEECCGGGSCHHHHHHHHHHHHHHTCCEEEECTTCHHHHCSBTTBCCCH---HHHHHHHHHHTTTCEEEEECS-----
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECHHHCCCCCCCCCHH---HHHHHHHHHHHCCCEEEEECC-----
T ss_conf 977767966589789999999999829988999245142048889945869---999999999978998999589-----
Q ss_pred CCCCCCCCCCCCC-CCCEE----------------EECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCC
Q ss_conf 0188988861365-79915----------------306995569999999999999987222220379856985145655
Q 003498 128 EWNFGGFPVWLKY-IPGIN----------------FRTENGPFKAEMHKFTKKIVDMMKAERLFESQGGPIILSQIENEY 190 (815)
Q Consensus 128 Ew~~GG~P~WL~~-~p~i~----------------~Rt~d~~y~~~~~~~~~~i~~~i~~~~l~~~~gGpII~~QIENEy 190 (815)
.+++|.|+.. .|++. ...+++.|++++++++++|+++++++ +.||+|||+||+
T Consensus 73 ---~~~~P~Wl~~~~P~~~~~~~~G~~~~~g~r~~~~~~~p~~~~~~~~~~~~l~~ry~~~-------p~V~~w~i~NE~ 142 (645)
T 1kwg_A 73 ---TATPPKWLVDRYPEILPVDREGRRRRFGGRRHYCFSSPVYREEARRIVTLLAERYGGL-------EAVAGFQTDNEY 142 (645)
T ss_dssp ---TTSCCHHHHHHCGGGSCBCTTSCBCCSSSSCCCCTTCHHHHHHHHHHHHHHHHHHTTC-------TTEEEEECSSST
T ss_pred ---CCCCCHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC-------CCEEEEEECCCC
T ss_conf ---8889856762598526667998676667645679999999999999999999985999-------818999936867
Q ss_pred CCCC--CCCC-CCCHHHH--------------------------------------------------------------
Q ss_conf 6754--3459-8877889--------------------------------------------------------------
Q 003498 191 GPME--YEIG-APGRSYT-------------------------------------------------------------- 205 (815)
Q Consensus 191 g~~~--~~~~-~~~~~Y~-------------------------------------------------------------- 205 (815)
+... .+|+ .+.++|.
T Consensus 143 ~~~~~~~~y~~~~~~~f~~wL~~~y~~i~~ln~awgt~fws~~~~~w~~i~~P~~~~~~~~~~~~~d~~~F~~~~~~~~~ 222 (645)
T 1kwg_A 143 GCHDTVRCYCPRCQEAFRGWLEARYGTIEALNEAWGTAFWSQRYRSFAEVELPHLTVAEPNPSHLLDYYRFASDQVRAFN 222 (645)
T ss_dssp TTTTTSCCCSHHHHHHHHHHHHHHHSSHHHHHHHHTTTGGGCCCSSGGGCCCSCSCSSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 77878886899999999999998866999999875745234555768554898766777884788889999999999999
Q ss_pred HHHHHHHHHCCCCCCEEECCCCCC--CC-----CCCC--CCCCCCCC---C-----------CC-CCC------------
Q ss_conf 999999984599745265178899--97-----5422--77886556---6-----------79-899------------
Q 003498 206 RWAAKMAVGLGTGVPWIMCKQDDA--PD-----PLIN--TCNGFYCD---Y-----------FS-PNK------------ 249 (815)
Q Consensus 206 ~~l~~~~~~~g~~vP~~~~~~~~~--p~-----~vi~--t~ng~~~~---~-----------f~-~~~------------ 249 (815)
+++++..++.+.++|.+++-.... .+ +.++ ..+ .|.. . |. ...
T Consensus 223 ~~~~~~ir~~~p~~pvt~n~~~~~~~~d~~~~a~~lDv~~~d-~Y~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~dl~r 301 (645)
T 1kwg_A 223 RLQVEILRAHAPGKFVTHNFMGFFTDLDAFALAQDLDFASWD-SYPLGFTDLMPLPPEEKLRYARTGHPDVAAFHHDLYR 301 (645)
T ss_dssp HHHHHHHHHHSTTCEEECEECTTCCSSCHHHHGGGSSSEEEE-ECHHHHHHHSCCCHHHHHHTTTTCCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHCCCEEEEC-CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 999999998689985798477677776899987449599977-7886444433333321112345675567777777887
Q ss_pred --CCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf --999906530165235554899988996889999999998098012331542378978779999633467789987767
Q 003498 250 --AYKPKMWTEAWTGWYTEFGGPVPHRPVEDLAFSVAKFIQKGGSFINYYMYHGGTNFGRTAGGPFIATSYDYDAPLDEY 327 (815)
Q Consensus 250 --p~~P~~~tE~~~Gwf~~wG~~~~~r~~ed~~~~v~~~~~~g~s~~N~YM~hGGTNfG~~~G~~~~~TSYDYdApl~E~ 327 (815)
..+|.+.+|+.+|..+ |+.......+..+.......++.|+..++|+-+ - ..++...+|+++ .|++.
T Consensus 302 ~~~~kP~~i~E~~~~~~~-w~~~~~~~~pg~~r~~~~~~~a~Ga~~~~~f~w--------~-~~~~~~E~~~~g-~l~~~ 370 (645)
T 1kwg_A 302 GVGRGRFWVMEQQPGPVN-WAPHNPSPAPGMVRLWTWEALAHGAEVVSYFRW--------R-QAPFAQEQMHAG-LHRPD 370 (645)
T ss_dssp HHTTTCEEEEEECCSCCS-SSSSCCCCCTTHHHHHHHHHHHTTCSCEEEECS--------B-CCSSSTTTTSCC-SBCTT
T ss_pred HHCCCCEEEECCCCCCCC-CCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEE--------C-CCCCCCCCCCCC-CCCCC
T ss_conf 605998798568888888-766788899309999999998557877888631--------2-689971014434-33878
Q ss_pred CCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 9888613799999999987403
Q 003498 328 GLLRQPKWGHLKDLHRAIKLCE 349 (815)
Q Consensus 328 G~~~~pKy~~lr~l~~~i~~~~ 349 (815)
|.+ +++|.+++++...++..+
T Consensus 371 g~~-~~~~~e~~~~~~~l~~~~ 391 (645)
T 1kwg_A 371 SAP-DQGFFEAKRVAEELAALA 391 (645)
T ss_dssp SCB-CHHHHHHHHHHHHHHTCC
T ss_pred CCC-CHHHHHHHHHHHHHHHHC
T ss_conf 992-889999999999998633
No 10
>3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A*
Probab=1.00 E-value=1 Score=171.54 Aligned_cols=179 Identities=20% Similarity=0.331 Sum_probs=138.1
Q ss_pred ECCCCEEECCEEEEEEEEEEECCCC-CCCCHHHHHHHHHHCCCCEEEECCCC----------CCCCCCCCEEE-------
Q ss_conf 7167299979695999997519999-93237999999997899889973107----------76688896032-------
Q 003498 35 YDSKAIAINGKRRILISGSIHYPRS-SPEMWPDLIQKAKDGGLDVIQTYVFW----------NGHEPSPGKYY------- 96 (815)
Q Consensus 35 ~d~~~~~idG~~~~i~sG~~Hy~R~-~~~~W~~~l~k~Ka~GlN~V~tyv~W----------n~hEp~~G~yd------- 96 (815)
.++..|.+||+|+++.+..+||.+. +++.|+++|+.||++|+|+|++++|| ..+||.+|+||
T Consensus 15 ~~g~~F~ldGkp~~f~G~N~y~~~~~~~~~i~~~l~~~a~~G~N~VRv~~f~d~~~~~~~~~~~lqp~~G~yd~~~~~~~ 94 (383)
T 3pzg_A 15 VPRGSHMLNGKEFRFIGSNNYYMHYKSNRMIDSVLESARDMGIKVLRIWGFLDGESYCRDKNTYMHPEPGVFGVPEGISN 94 (383)
T ss_dssp ------------CCEEEEECSCTTTSCHHHHHHHHHHHHHHTCCEEEEECCCBSHHHHHHHTEESBSBTTBCSSCTTCSS
T ss_pred CCCCEEEECCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 04998989999999988870245669999999999999976998899701156555566665433667985464334442
Q ss_pred -ECCCHHHHHHHHHHHHCCCEEEEECCCEECCCC-CCCCCCCCCCCCCC--EEEECCCHHHHHHHHHHHHHHHHHHHHC-
Q ss_conf -035124999999999849779972283001001-88988861365799--1530699556999999999999998722-
Q 003498 97 -FEGNYDLVKFIKLAKQAGLYVNLRIGPYVCAEW-NFGGFPVWLKYIPG--INFRTENGPFKAEMHKFTKKIVDMMKAE- 171 (815)
Q Consensus 97 -F~G~~dL~~fi~la~~~GL~vilr~GPyicaEw-~~GG~P~WL~~~p~--i~~Rt~d~~y~~~~~~~~~~i~~~i~~~- 171 (815)
.++...|+++|++|+++||+|||.+ +.+| ++||.|.|+....+ .....+|+.++++.+++++.|++++...
T Consensus 95 ~~~~~~~LD~~i~~A~k~GI~viL~l----~~~w~~~GG~~~y~~~~g~~~~~~f~~dp~~~~~~~~~~~~l~~r~N~~t 170 (383)
T 3pzg_A 95 AQNGFERLDYTIAKAKELGIKLIIVL----VNNWDDFGGMNQYVRWFGGTHHDDFYRDERIKEEYKKYVSFLINHVNVYT 170 (383)
T ss_dssp CEEHHHHHHHHHHHHHHHTCEEEEEC----CBSSSTTSHHHHHHHHTTCCSTTHHHHCHHHHHHHHHHHHHHHTCBCTTT
T ss_pred HHHHHHHHHHHHHHHHHCCCEEEEEC----CCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 47899999999999998899899973----66654557864113324898635556899999999999999985535456
Q ss_pred CCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHH---HHCCCCCC
Q ss_conf 22203798569851456556754345988778899999999---84599745
Q 003498 172 RLFESQGGPIILSQIENEYGPMEYEIGAPGRSYTRWAAKMA---VGLGTGVP 220 (815)
Q Consensus 172 ~l~~~~gGpII~~QIENEyg~~~~~~~~~~~~Y~~~l~~~~---~~~g~~vP 220 (815)
.+.+++.++|++|||.||+++... .....+..|+++|+ |+.+-..|
T Consensus 171 G~~y~~~p~I~~w~l~NEp~~~~~---~~~~~~~~w~~~~~~~IR~~Dp~~l 219 (383)
T 3pzg_A 171 GVPYREEPTIMAWELANELRCETD---KSGNTLVEWVKEMSSYIKSLDPNHL 219 (383)
T ss_dssp CCBGGGCTTEEEEESCBTCCCTTC---TTSHHHHHHHHHHHHHHHHHCSSSE
T ss_pred CCCCCCCCCEEEEEECCCCCCCCC---CCHHHHHHHHHHHHHHHHHHCCCCE
T ss_conf 731079985789995377776667---6479999999999999996589966
Done!