Query 003500
Match_columns 815
No_of_seqs 327 out of 866
Neff 5.9
Searched_HMMs 46136
Date Fri Mar 29 00:37:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003500.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003500hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02219 probable galactinol-- 100.0 6E-218 1E-222 1844.8 73.6 773 42-815 1-775 (775)
2 PLN02684 Probable galactinol-- 100.0 2E-213 4E-218 1807.8 71.5 744 42-815 1-750 (750)
3 PLN02355 probable galactinol-- 100.0 8E-213 2E-217 1807.4 73.2 749 42-815 1-758 (758)
4 PLN02982 galactinol-raffinose 100.0 2E-210 5E-215 1776.0 68.9 737 43-815 19-865 (865)
5 PLN02711 Probable galactinol-- 100.0 1E-206 2E-211 1752.9 70.2 740 38-815 14-777 (777)
6 PF05691 Raffinose_syn: Raffin 100.0 4E-200 8E-205 1715.0 65.9 719 48-799 1-747 (747)
7 PLN02229 alpha-galactosidase 100.0 1E-38 2.2E-43 354.9 29.5 337 239-697 63-422 (427)
8 PLN02692 alpha-galactosidase 100.0 6.1E-39 1.3E-43 355.3 27.3 340 239-695 56-411 (412)
9 PLN02808 alpha-galactosidase 100.0 6.4E-38 1.4E-42 346.3 27.1 330 239-694 32-385 (386)
10 PLN03231 putative alpha-galact 100.0 5E-36 1.1E-40 328.0 23.0 296 240-567 2-341 (357)
11 PLN02899 alpha-galactosidase 100.0 2.6E-34 5.6E-39 326.8 21.9 298 236-565 28-369 (633)
12 KOG2366 Alpha-D-galactosidase 99.9 5.8E-27 1.3E-31 251.7 16.7 338 239-696 33-413 (414)
13 PF02065 Melibiase: Melibiase; 99.9 2.7E-25 6E-30 248.3 21.1 240 197-491 4-256 (394)
14 COG3345 GalA Alpha-galactosida 99.9 7.1E-23 1.5E-27 228.0 19.1 284 155-494 208-524 (687)
15 cd06592 GH31_glucosidase_KIAA1 99.4 1.2E-12 2.6E-17 142.8 13.0 150 237-431 11-166 (303)
16 cd06593 GH31_xylosidase_YicI Y 99.1 1E-09 2.3E-14 119.9 16.1 178 252-473 20-209 (308)
17 PRK10658 putative alpha-glucos 98.8 2.2E-07 4.9E-12 111.4 22.2 178 200-431 238-419 (665)
18 cd06595 GH31_xylosidase_XylS-l 98.7 2.4E-07 5.3E-12 100.9 16.8 210 234-500 7-219 (292)
19 cd06598 GH31_transferase_CtsZ 98.7 2.9E-07 6.2E-12 101.4 15.4 155 234-430 6-164 (317)
20 PRK10426 alpha-glucosidase; Pr 98.7 6.2E-06 1.3E-10 98.8 26.9 238 200-497 179-433 (635)
21 cd06591 GH31_xylosidase_XylS X 98.6 5.4E-07 1.2E-11 99.4 15.5 149 234-430 6-159 (319)
22 cd06599 GH31_glycosidase_Aec37 98.6 1.8E-07 3.9E-12 103.1 11.3 155 234-430 6-168 (317)
23 cd06597 GH31_transferase_CtsY 98.5 3.5E-06 7.6E-11 93.8 18.2 221 234-498 6-256 (340)
24 cd06594 GH31_glucosidase_YihQ 98.5 2.4E-06 5.3E-11 94.2 16.7 216 234-497 6-236 (317)
25 PF01055 Glyco_hydro_31: Glyco 98.5 3.9E-06 8.4E-11 96.2 17.1 171 201-430 1-180 (441)
26 cd06604 GH31_glucosidase_II_Ma 98.4 1.3E-06 2.9E-11 97.0 10.6 146 234-430 6-159 (339)
27 cd06589 GH31 The enzymes of gl 98.4 1.3E-05 2.9E-10 86.1 17.2 74 245-349 13-87 (265)
28 cd06602 GH31_MGAM_SI_GAA This 98.4 5.6E-06 1.2E-10 92.2 14.5 187 234-473 6-204 (339)
29 cd06600 GH31_MGAM-like This fa 98.3 1E-05 2.2E-10 89.4 13.7 185 234-473 6-200 (317)
30 COG1501 Alpha-glucosidases, fa 98.1 0.00014 3.1E-09 88.6 21.0 237 198-498 234-486 (772)
31 cd06601 GH31_lyase_GLase GLase 98.1 2E-05 4.4E-10 87.5 11.5 127 234-430 6-133 (332)
32 PF10566 Glyco_hydro_97: Glyco 98.0 4.4E-05 9.5E-10 82.3 12.2 179 247-516 23-208 (273)
33 cd06603 GH31_GANC_GANAB_alpha 97.9 2.6E-05 5.6E-10 86.8 9.1 147 234-430 6-162 (339)
34 PLN02763 hydrolase, hydrolyzin 97.8 0.00078 1.7E-08 83.5 19.9 169 202-430 160-336 (978)
35 KOG1065 Maltase glucoamylase a 96.2 0.14 3.1E-06 62.3 17.4 175 199-431 267-449 (805)
36 TIGR01515 branching_enzym alph 91.6 5.7 0.00012 48.2 17.2 143 253-431 153-299 (613)
37 PF13200 DUF4015: Putative gly 90.3 7 0.00015 43.6 15.0 129 254-432 11-149 (316)
38 cd06596 GH31_CPE1046 CPE1046 i 75.4 39 0.00084 36.8 12.2 160 254-527 43-203 (261)
39 PRK14705 glycogen branching en 72.8 67 0.0015 42.2 15.5 141 311-471 807-959 (1224)
40 KOG1066 Glucosidase II catalyt 70.6 30 0.00066 42.2 10.8 103 198-346 327-431 (915)
41 PRK14706 glycogen branching en 69.6 96 0.0021 38.1 15.2 69 399-468 278-356 (639)
42 PRK12568 glycogen branching en 69.1 51 0.0011 41.0 12.8 73 398-470 379-462 (730)
43 PRK10785 maltodextrin glucosid 69.0 65 0.0014 39.1 13.6 64 254-342 177-241 (598)
44 PF02638 DUF187: Glycosyl hydr 68.6 1.2E+02 0.0026 33.8 14.6 141 254-430 17-164 (311)
45 cd02932 OYE_YqiM_FMN Old yello 64.1 71 0.0015 35.7 11.9 73 252-354 30-103 (336)
46 TIGR02402 trehalose_TreZ malto 64.1 1.6E+02 0.0034 35.5 15.4 28 404-431 220-248 (542)
47 PF00724 Oxidored_FMN: NADH:fl 63.4 1.1E+02 0.0024 34.4 13.2 163 253-459 33-215 (341)
48 PRK05402 glycogen branching en 60.2 2.7E+02 0.0058 34.8 16.9 33 398-430 375-407 (726)
49 COG0296 GlgB 1,4-alpha-glucan 58.2 60 0.0013 39.6 10.4 141 254-434 163-310 (628)
50 PRK10933 trehalose-6-phosphate 56.2 1.4E+02 0.0031 35.9 13.3 34 399-433 173-206 (551)
51 cd02871 GH18_chitinase_D-like 54.8 1.1E+02 0.0023 33.9 11.2 64 402-472 92-155 (312)
52 PRK12313 glycogen branching en 53.6 4E+02 0.0087 32.6 16.7 32 398-430 280-312 (633)
53 cd04734 OYE_like_3_FMN Old yel 53.2 1.6E+02 0.0034 33.3 12.3 73 252-354 30-103 (343)
54 PRK14582 pgaB outer membrane N 49.6 2.3E+02 0.0049 35.2 13.5 140 253-433 331-471 (671)
55 PLN02447 1,4-alpha-glucan-bran 43.7 5.8E+02 0.013 32.2 15.9 69 399-468 362-444 (758)
56 cd02930 DCR_FMN 2,4-dienoyl-Co 41.7 3E+02 0.0065 31.0 12.3 23 326-349 77-100 (353)
57 TIGR02403 trehalose_treC alpha 37.2 3.8E+02 0.0082 32.2 12.8 33 399-432 166-198 (543)
58 PRK13523 NADPH dehydrogenase N 36.6 5.4E+02 0.012 29.0 13.2 126 252-429 34-164 (337)
59 PLN00196 alpha-amylase; Provis 35.7 5.4E+02 0.012 30.1 13.3 83 235-342 25-107 (428)
60 PF14307 Glyco_tran_WbsX: Glyc 34.2 4.7E+02 0.01 29.4 12.3 146 248-471 50-199 (345)
61 PF15016 DUF4520: Domain of un 34.2 98 0.0021 28.2 5.5 50 754-803 6-59 (85)
62 PRK14833 undecaprenyl pyrophos 31.7 2E+02 0.0043 30.9 8.3 23 504-526 192-214 (233)
63 cd02803 OYE_like_FMN_family Ol 31.1 3E+02 0.0066 30.3 10.0 23 326-349 77-100 (327)
64 cd02929 TMADH_HD_FMN Trimethyl 30.4 8.4E+02 0.018 27.8 13.6 23 326-349 83-106 (370)
65 KOG2500 Uncharacterized conser 29.4 34 0.00074 36.3 2.0 34 666-699 43-77 (253)
66 PF13200 DUF4015: Putative gly 28.8 1.4E+02 0.0031 33.4 6.9 63 206-271 242-305 (316)
67 cd02875 GH18_chitobiase Chitob 28.6 97 0.0021 35.1 5.7 32 400-431 92-123 (358)
68 cd00598 GH18_chitinase-like Th 27.8 1.9E+02 0.0041 29.2 7.2 65 401-473 85-149 (210)
69 cd04733 OYE_like_2_FMN Old yel 27.6 6.6E+02 0.014 28.1 12.0 23 326-349 82-105 (338)
70 cd04747 OYE_like_5_FMN Old yel 26.7 5E+02 0.011 29.6 10.9 26 326-354 78-104 (361)
71 cd06544 GH18_narbonin Narbonin 25.0 1.3E+02 0.0029 32.4 5.7 28 403-430 96-123 (253)
72 cd06548 GH18_chitinase The GH1 24.7 2.6E+02 0.0057 30.9 8.1 30 401-430 106-135 (322)
73 PLN02960 alpha-amylase 24.2 5.1E+02 0.011 33.2 11.0 69 399-468 528-609 (897)
74 PRK10240 undecaprenyl pyrophos 24.1 5.5E+02 0.012 27.5 10.0 19 328-347 26-44 (229)
75 PLN02784 alpha-amylase 23.8 1.5E+03 0.032 29.2 14.8 79 237-342 505-583 (894)
76 COG1649 Uncharacterized protei 23.5 1.2E+03 0.027 27.3 13.3 143 252-431 60-210 (418)
77 PLN03244 alpha-amylase; Provis 22.4 8.1E+02 0.018 31.2 12.0 66 403-468 506-584 (872)
78 PLN02411 12-oxophytodienoate r 21.0 5E+02 0.011 29.9 9.6 23 326-349 87-110 (391)
79 PRK14835 undecaprenyl pyrophos 20.9 2.5E+02 0.0055 30.9 6.8 39 483-526 220-258 (275)
80 cd00475 CIS_IPPS Cis (Z)-Isopr 20.6 4.8E+02 0.01 27.8 8.6 19 328-347 33-51 (221)
81 TIGR02104 pulA_typeI pullulana 20.5 7.5E+02 0.016 30.1 11.4 28 403-430 294-322 (605)
No 1
>PLN02219 probable galactinol--sucrose galactosyltransferase 2
Probab=100.00 E-value=6.5e-218 Score=1844.79 Aligned_cols=773 Identities=86% Similarity=1.391 Sum_probs=741.4
Q ss_pred ccccceeeeeCcEEEEeCeecccCCCCCeEEeecCCCccccceeeecccCCCCcceeeeCCCccCceeEEEeeeccCccc
Q 003500 42 MTVAPNISISDGNLVVHGKTILTGVPDNIILTPGNGVGLVAGAFIGATASHSKSLHVFPMGVLEDLRFMCCFRFKLWWMT 121 (815)
Q Consensus 42 ~~~~~~~~~~~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~lG~~~~~r~~~l~r~k~~W~~ 121 (815)
|||++.|+++||+|+|+|+++|++||+||+++|.+....+.|+|+||++++++|||++|||+++++|||||||||+|||+
T Consensus 1 mt~~~~~~~~~~~l~v~g~~~l~~vp~nv~~t~~~~~~~~~g~F~G~~~~~~~srhv~~~G~l~~~rf~~~fRfK~WWmt 80 (775)
T PLN02219 1 MTVTPKISINNGNLVVQGKTILTGVPDNIVLTPGSGNGFVAGAFIGATASHSKSLHVFPVGVLEGLRFMCCFRFKLWWMT 80 (775)
T ss_pred CcccceeEEcCCeEEECCEEeeccCCCceEecCCCCCCCCcceEEeeecCCcccceeeecccccCcEEeeeeehhhhccc
Confidence 99999999999999999999999999999999998777789999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCcccEEEEEecCCCCCC-CCCCCCeEEEEEEEeecCceEEEeecCCCCeEEEEEecCCcceeccccceEE
Q 003500 122 QRMGTCGKDVPLETQFMLVESKDNSES-DQDDGPTIYTVFLPLLEGQFRSALQGNENNEIEICLESGDNAVETNQGLYLV 200 (815)
Q Consensus 122 pr~g~~~~~ip~etq~ll~e~~~~~~l-~~~~~~~~y~v~Lp~~~g~~ra~L~~~~~~~~~i~~~sg~~~~~~~~~~~~v 200 (815)
||+|++++|||.||||+|+|.++.... ..+++++.|+|+|||++|.|||+||++++++|+||+|||++.++++++..+|
T Consensus 81 ~~~G~~g~dip~eTQ~~l~e~~~~~~~~~~~~~~~~Y~~~lP~~eg~fRa~Lqg~~~~~l~iclesg~~~v~~~~~~~~v 160 (775)
T PLN02219 81 QRMGSCGKDIPLETQFMLLESKDEVEGGNGDDAPTIYTVFLPLLEGQFRAVLQGNDKNEIEICLESGDKAVETNQGLHLV 160 (775)
T ss_pred hhhccCCCcCCcceEEEEEEcCCCccccccccCCcceEEEEeecCCceEEEecCCCCCcEEEEEecCCccccccccceEE
Confidence 999999999999999999999863211 1122345799999999999999999999999999999999999999999999
Q ss_pred EEEeCCChHHHHHHHHHHHHHHhhcccccccccCCCcccccccccccccccccCHHHHHHHHHHHHhCCCCCcEEEEecc
Q 003500 201 YTHAGPNPFEVISQAVKAVEKYMQTFTHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDG 280 (815)
Q Consensus 201 ~v~~g~dp~~~i~~A~~~v~~~l~tf~~~~~K~~P~~~d~lGWCTWdaf~~~vte~~I~~~l~~L~~~Gi~~~~vIIDDG 280 (815)
||++|+|||++|++|++++++|+++|++|++|++|+++|+||||||||||++|||++|++++++|+++|+|++|||||||
T Consensus 161 ~~~~G~dPy~li~~a~~av~~h~~tf~~re~K~~p~~~D~~GWCTWdafy~dVt~~~I~~~l~~l~e~gip~~~viIDDG 240 (775)
T PLN02219 161 YMHAGTNPFEVIRQAVKAVEKHMQTFLHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSEGGTPPKFLIIDDG 240 (775)
T ss_pred EEecCCCHHHHHHHHHHHHHHhcccccccccccCccccceeeEEEhhHhhccCCHHHHHHHHHHHHhCCCCceEEEEccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcccCCCCcccchhhccccccccccCCCccCCcccccccCCcCCCChHHHHHHHHhcCCCcEEEEEeecccccCCcCCC
Q 003500 281 WQQIENKPKEESNCIVQEGAQFASRLTGIKENSKFQKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGVKPA 360 (815)
Q Consensus 281 WQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~n~KFp~~~~~~~~p~GLk~lv~~Ik~~~Glk~vgvWHal~GYWgGI~P~ 360 (815)
||+.+++.+ +.++...+|.||++||++|++|.||+.....++||.|||++|+.||+++|||||||||||+||||||+|+
T Consensus 241 wQsi~~~~~-~~~~~~~~g~qf~~rL~~f~en~KF~~~~~~~~fp~Glk~~V~~iK~~~~vk~V~VWHAL~GYWGGv~P~ 319 (775)
T PLN02219 241 WQQIENKEK-DENCVVQEGAQFATRLTGIKENAKFQKNDQKNEQVSGLKHVVDDAKQRHNVKQVYVWHALAGYWGGVKPA 319 (775)
T ss_pred ccccccccc-cccccccccchhhhhhccccccccccccccccCCCCcHHHHHHHHHhccCCcEEEEeeeccceecCcCCC
Confidence 999998754 5577888999999999999999999954334579999999999999999999999999999999999999
Q ss_pred CcccccccccccccCCCCCCCCCCCcceeccccccccCccCHHHHHHHHHHHHHHHHhcCCCEEEEccccchhhccCCCC
Q 003500 361 ADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHGLGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHG 440 (815)
Q Consensus 361 s~~~~~y~~~~~~p~~spG~~~~~pd~a~d~~~~~glglv~p~~a~~fYd~l~~~Las~GVD~VKvD~q~~l~~l~~~~~ 440 (815)
++++++|+++++||+.+||..+++||++++++..+|+++++|+++++|||+||+||+++||||||||+|+.+++++.+++
T Consensus 320 ~~~~~~Y~~~~~~p~~spg~~~~~pd~a~d~l~~~G~glV~P~~~~~FYd~~hsyLas~GVDgVKVDvQ~~Le~L~~~~g 399 (775)
T PLN02219 320 AAGMEHYDSALAYPVQSPGVLGNQPDIVMDSLSVHGLGLVNPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHG 399 (775)
T ss_pred CcccccccccccccccCCCccccCcchhhhhhhhCCccccCHHHHHHHHHHHHHHHHHcCCCEEEEchhhhHHHhhccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CchhHHHHHHHHHHHHHHhcCCCCcEEeeccCCCCCcccccccCeEEccCccCCCCccchhhHHHHhhhhhhhccCCCCC
Q 003500 441 GRVSLTRSYHQALEASIARNFPDNGCISCMCHNTDGIYSSKQTAVIRASDDYYPRDPASHTIHISSVAYNTLFLGEFMQP 520 (815)
Q Consensus 441 grv~l~~ay~~AL~~s~~~~f~g~~iI~cMs~~~~~l~~~~~~~~~R~SdDf~p~~p~~~~~Hi~~na~nsl~~g~~~~P 520 (815)
+|++++++||+||++|++|||+++++|+||||+++++|+.++++++|+||||||++|++|++||++|||||||||+++||
T Consensus 400 grv~la~~y~~ALe~S~~r~F~~ng~I~CMsh~~d~i~~~k~sav~R~SDDF~P~dP~sh~~Hi~~nAyNSLllg~~v~P 479 (775)
T PLN02219 400 GRVSLTRSYQQALEASIARNFTDNGCISCMCHNTDGLYSAKQTAVVRASDDFYPRDPASHTIHISSVAYNTLFLGEFMQP 479 (775)
T ss_pred cHHHHHHHHHHHHHHHHHHhCCCCCeEEecccCchhhhcccccceeecccccccCCCccCcchhhhhhhhhHHhcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCChhHHHHHHHHHhcCCcEEeecCCCCCcHHHHhhhcCCCCceeecCCCCCCCccccccCcCCCCcceEEEEe
Q 003500 521 DWDMFHSLHPAAEYHGAARAVGGCAIYVSDKPGNHNFDLLRKLVLPDGSVLRAQLPGRPTRDCLFADPARDGTSLLKVWN 600 (815)
Q Consensus 521 DwDMf~s~h~~a~~HaaaraisGgPvyiSD~pg~hd~~lL~~Lv~pdG~ilR~~~pg~pt~d~lf~dp~~d~~~lLkiwn 600 (815)
|||||||.||+|+|||++||||||||||||+||+|||+||||||+|||+||||++||||||||||.||++|++++|||||
T Consensus 480 DWDMFqS~Hp~A~~HAaaRAiSGGPIYvSD~PG~Hdf~LLk~LvlpDGsIlR~~~pg~PTrDclF~Dp~~dg~slLKIwn 559 (775)
T PLN02219 480 DWDMFHSLHPAAEYHGAARAVGGCAIYVSDKPGNHNFDLLRKLVLPDGSVLRAQLPGRPTRDCLFADPARDGTSLLKIWN 559 (775)
T ss_pred CchhceecCccHHHHHHHHhhcCCcEEEecCCCCccHHHHHHhhCCCCceeccccCCCcchhhhccccCCCCceEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCcceEEEEeecCCccccccccccccCCCCcceeeeeecccchhhhhhhCCCCCCcEEEEEeccceEEecCCCCeEeE
Q 003500 601 VNKCSGVVGVFNCQGAGWCKITKKTRIHDESPGTLTASVRVTDVENMAQIAGAGWNGDAIVYAHRSGEVVRLPKGASVPV 680 (815)
Q Consensus 601 ~~~~~gvlg~FN~~ga~w~~~~~~~~~~~~~~~~~s~~v~~~D~~~~~~~~~~~~~~~~vvy~~~sg~l~~l~~~~~~~v 680 (815)
+|+++||||+|||||++||++++++++|+.++.++|+.|++.||+++.++++.+|+++|+||+|++|+++++++++.++|
T Consensus 560 ~n~~~gviG~FNcqGagW~~~~~~~~~~~~~~~~~s~~v~~~Dv~~i~~~a~~~w~~~~~vy~~~sg~l~~l~~~~~~~v 639 (775)
T PLN02219 560 VNKCTGVVGVFNCQGAGWCKIEKKTRIHDTSPGTLTGSVCADDVDQIAQVAGEDWSGDSVVYAYKSGEVVRLPKGASIPV 639 (775)
T ss_pred cccccceEEEEeccCCCCCchhhccccccCCCcceEEEEcchhccchhhccccCcCCCEEEEEeccCeEEEcCCCCceEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCcEEEEEEeeeeeecCceeEEEehhhhhhcCCCceeEEEEEeccCCCCCCCCCc-ccccccccCCCCCCceEEEEE
Q 003500 681 TLKVLEYELFHFCPLKEISSNISFAAIGLLDMFNSGGAVENVEVHMSEKKPDLFDGEV-SSELTTSLSDNRSPTATISLK 759 (815)
Q Consensus 681 ~L~~~~~ei~t~~Pv~~~~~~~~~A~iGL~~k~~~~~AV~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~v~v~ 759 (815)
+|++++|||||++||+.+..+++||||||+||||++|||+++++....+.+.++++|+ .|+++++++.+......|+|+
T Consensus 640 tL~~~~~Ei~tv~Pv~~~~~~~~fApiGL~~m~n~ggAi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 719 (775)
T PLN02219 640 TLKVLEYELFHFCPLKEIATNISFAPIGLLDMFNSGGAVEQFEIHMVSDKAPELFDGEISSELSTSLSENRSPTATIALS 719 (775)
T ss_pred EecCCcEEEEEEeeEEEecCCcEEEecchhhcccCceeeEEeEeecccccccccccccccccccccccccCCCCceEEEE
Confidence 9999999999999999999899999999999999999999999986666666677765 688888888777777789999
Q ss_pred EEeeceeEEEEcCCCceeEECCeEeeEEEeCCceeEEEEccCCccCcceeeeEEeC
Q 003500 760 VRGCGRFGIYSSQRPLKCTVGSIQTDFTYDSATGLMTMTLPVPEEEMYRWPVEIQV 815 (815)
Q Consensus 760 vkg~G~fg~YsS~~P~~c~vdg~~~~f~y~~~~gl~t~~l~~~~~~~~~~~v~i~~ 815 (815)
|||||+||+|||++|++|.|||++++|+|++++|||+|+||||++++++|.|||++
T Consensus 720 v~G~G~f~aYsS~~P~~c~vd~~~~~f~y~~~sg~~~~~l~~~~~~~~~~~v~~~~ 775 (775)
T PLN02219 720 VRGCGRFGAYSSQRPLKCAVGSTETDFTYDAEVGLLTLTLPVTEEEMYRWHVEIQV 775 (775)
T ss_pred EEcccceeeEecCCCeEEEECCEEeeeEEcCCCCeEEEEccCCcccCceeeEEEeC
Confidence 99999999999999999999999999999999999999999999999999999985
No 2
>PLN02684 Probable galactinol--sucrose galactosyltransferase
Probab=100.00 E-value=1.7e-213 Score=1807.77 Aligned_cols=744 Identities=57% Similarity=1.057 Sum_probs=713.8
Q ss_pred ccccceeeeeCcEEEEeCeecccCCCCCeEEeecCCCccccceeeecccCCCCcceeeeCCCccCceeEEEeeeccCccc
Q 003500 42 MTVAPNISISDGNLVVHGKTILTGVPDNIILTPGNGVGLVAGAFIGATASHSKSLHVFPMGVLEDLRFMCCFRFKLWWMT 121 (815)
Q Consensus 42 ~~~~~~~~~~~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~lG~~~~~r~~~l~r~k~~W~~ 121 (815)
|||++.|+++||+|+|+|+++|++||+||+++|.+....+.|+|+||++++++|||+++||+++++|||||||||+|||+
T Consensus 1 mt~~~~~~~~~~~l~v~g~~~l~~vp~nv~~t~~~~~~~~~g~f~g~~~~~~~srhv~~~G~l~~~rf~~~fRfK~WWmt 80 (750)
T PLN02684 1 MTIKPAVRISDGKLIVKNRTILTGVPDNVIATSGSESGPVEGVFVGAVFDKENSKHVVSLGTLRDVRFMACFRFKLWWMA 80 (750)
T ss_pred CcccceeEEcCCeEEECCEEeeccCCCceEecCCCCCCcCcceEEeeecCCcccceeeecccccCcEeehhhhhhhhhcc
Confidence 99999999999999999999999999999999998777789999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCcccEEEEEecCCCCCCCCCC----CCeEEEEEEEeecCceEEEeecCCCCeEEEEEecCCcceeccccc
Q 003500 122 QRMGTCGKDVPLETQFMLVESKDNSESDQDD----GPTIYTVFLPLLEGQFRSALQGNENNEIEICLESGDNAVETNQGL 197 (815)
Q Consensus 122 pr~g~~~~~ip~etq~ll~e~~~~~~l~~~~----~~~~y~v~Lp~~~g~~ra~L~~~~~~~~~i~~~sg~~~~~~~~~~ 197 (815)
||+|++++|||.||||||+|.++++++..|+ +++.|+|+|||++|+|||+||++++++++||+|||+++|+++++.
T Consensus 81 ~~~G~~g~dip~eTQ~ll~e~~~~~~~~~~~~~~~~~~~Y~v~lPi~eg~fRa~Lqg~~~d~~~ic~eSg~~~v~~s~~~ 160 (750)
T PLN02684 81 QKMGDMGRDIPLETQFLLVETKDGSHLESDGANEENQKVYTVFLPLIEGSFRACLQGNVNDELELCLESGDVDTKRSSFT 160 (750)
T ss_pred hhhcCCCCCCCchhEEEEEEcCCCcccccccccccCCcceEEEEEecCCceEEEecCCCCCcEEEEEecCCccccccccc
Confidence 9999999999999999999999877665544 234799999999999999999999999999999999999999999
Q ss_pred eEEEEEeCCChHHHHHHHHHHHHHHhhcccccccccCCCcccccccccccccccccCHHHHHHHHHHHHhCCCCCcEEEE
Q 003500 198 YLVYTHAGPNPFEVISQAVKAVEKYMQTFTHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLII 277 (815)
Q Consensus 198 ~~v~v~~g~dp~~~i~~A~~~v~~~l~tf~~~~~K~~P~~~d~lGWCTWdaf~~~vte~~I~~~l~~L~~~Gi~~~~vII 277 (815)
.+|||++|+|||++|++|++++++|++||++|++|++|+++|+||||||||||++|||++|++++++|+++|+|++||||
T Consensus 161 ~~~~v~~g~~Py~~i~~a~~~v~~~l~tf~~reeK~~P~~~D~fGWCTWdafy~dVt~~~I~~~l~~l~~~g~p~~~vII 240 (750)
T PLN02684 161 HSLFIHAGTDPFQTITDAIRAVKLHLKSFRQRHEKKLPGIVDYFGWCTWDAFYQEVTQEGVEAGLKSLAAGGTPPKFVII 240 (750)
T ss_pred eeEEEecCCCHHHHHHHHHHHHHHHhhccchhhhccCccccceeeEEEhhHhhccCCHHHHHHHHHHHHhCCCCceEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecccCcccCCCCcccchhhccccccccccCCCccCCcccccccCCcCCCChHHHHHHHHhcCCCcEEEEEeecccccCCc
Q 003500 278 DDGWQQIENKPKEESNCIVQEGAQFASRLTGIKENSKFQKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGV 357 (815)
Q Consensus 278 DDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~n~KFp~~~~~~~~p~GLk~lv~~Ik~~~Glk~vgvWHal~GYWgGI 357 (815)
|||||+..++.+ +.++. ..+.||.+||++|++|.|||+. ..++.|||++|++||+++|||||||||||+||||||
T Consensus 241 DDGwQs~~~d~~-~~~~~-~~~~q~~~rL~~f~en~KF~~~---~~p~~Glk~~V~~iK~~~~vk~V~VWHAL~GYWGGv 315 (750)
T PLN02684 241 DDGWQSVGGDPT-VEAGD-EKKEQPLLRLTGIKENEKFKKK---DDPNVGIKNIVNIAKEKHGLKYVYVWHAITGYWGGV 315 (750)
T ss_pred eccccccccccc-ccccc-cccchhhhhhccCccccccccc---cCCCccHHHHHHHHHhhcCCcEEEEEeeeccccccc
Confidence 999999988754 22322 3458999999999999999942 133489999999999999999999999999999999
Q ss_pred CCCCcccccccccccccCCCCCCCCCCCcceeccccccccCccCHHHHHHHHHHHHHHHHhcCCCEEEEccccchhhccC
Q 003500 358 KPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHGLGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGA 437 (815)
Q Consensus 358 ~P~s~~~~~y~~~~~~p~~spG~~~~~pd~a~d~~~~~glglv~p~~a~~fYd~l~~~Las~GVD~VKvD~q~~l~~l~~ 437 (815)
+|+++++++|++++.+|+.+||...++|+++++++..+|+|+++|+++++|||+||+||+++||||||||+|+.+++++.
T Consensus 316 ~P~~~~~~~Y~s~~~~p~~s~gv~~~~p~~~~d~l~~~g~glv~P~~~~~FYd~~hsyL~s~GVDgVKVD~Q~~le~l~~ 395 (750)
T PLN02684 316 RPGVKEMEEYGSVMKYPNVSKGVVENDPTWKTDVMTLQGLGLVNPKKVYKFYNELHSYLADAGIDGVKVDVQCILETLGA 395 (750)
T ss_pred CCCCcchhhccccccccccCccccccCccccccccccCcccccCHHHHHHHHHHHHHHHHHcCCCeEEEChhhhHHHhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCchhHHHHHHHHHHHHHHhcCCCCcEEeeccCCCCCcccccccCeEEccCccCCCCccchhhHHHHhhhhhhhccCC
Q 003500 438 GHGGRVSLTRSYHQALEASIARNFPDNGCISCMCHNTDGIYSSKQTAVIRASDDYYPRDPASHTIHISSVAYNTLFLGEF 517 (815)
Q Consensus 438 ~~~grv~l~~ay~~AL~~s~~~~f~g~~iI~cMs~~~~~l~~~~~~~~~R~SdDf~p~~p~~~~~Hi~~na~nsl~~g~~ 517 (815)
++++|++++++||+||++|++|||+++++|+||||+++++|++++++++|+||||||++|++|++||++|||||||||++
T Consensus 396 ~~ggrv~l~~ay~~ALe~S~~r~F~~ngvI~CMs~~~d~i~~sk~sav~R~SDDF~p~dP~sh~~Hi~~~AyNSLllg~~ 475 (750)
T PLN02684 396 GLGGRVELTRQYHQALDASVARNFPDNGCIACMSHNTDALYCSKQTAVVRASDDFYPRDPVSHTIHIAAVAYNSVFLGEF 475 (750)
T ss_pred ccCcHHHHHHHHHHHHHHHHHHhCCCCCeEEecccCchhhhcccccceeeeccccccCCCccchhhhhhhhhhhhhhccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccCCChhHHHHHHHHHhcCCcEEeecCCCCCcHHHHhhhcCCCCceeecCCCCCCCccccccCcCCCCcceEE
Q 003500 518 MQPDWDMFHSLHPAAEYHGAARAVGGCAIYVSDKPGNHNFDLLRKLVLPDGSVLRAQLPGRPTRDCLFADPARDGTSLLK 597 (815)
Q Consensus 518 ~~PDwDMf~s~h~~a~~HaaaraisGgPvyiSD~pg~hd~~lL~~Lv~pdG~ilR~~~pg~pt~d~lf~dp~~d~~~lLk 597 (815)
+|||||||||.||+|+|||++||||||||||||+||+|||+|||+||+|||+||||++||||||||||.||++|++++||
T Consensus 476 v~PDWDMFqS~hp~A~~HAaaRAisGGPIYvSD~PG~Hdf~LLk~LvlpDGsIlR~~~pg~PTrDcLF~DP~~dg~slLK 555 (750)
T PLN02684 476 MQPDWDMFHSLHPAAEYHASARAISGGPLYVSDAPGKHNFELLKKLVLPDGSILRARLPGRPTRDCLFSDPARDGVSLLK 555 (750)
T ss_pred cccCcccceecCccHHHHHHHHhhcCCceEEecCCCCccHHHHHhhhCCCCcccccccCCccchhhhccCcccCCccEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeecCCcceEEEEeecCCccccccccccccCCCCcceeeeeecccchhhhhhhCCC-CCCcEEEEEeccceEEecCCCC
Q 003500 598 VWNVNKCSGVVGVFNCQGAGWCKITKKTRIHDESPGTLTASVRVTDVENMAQIAGAG-WNGDAIVYAHRSGEVVRLPKGA 676 (815)
Q Consensus 598 iwn~~~~~gvlg~FN~~ga~w~~~~~~~~~~~~~~~~~s~~v~~~D~~~~~~~~~~~-~~~~~vvy~~~sg~l~~l~~~~ 676 (815)
|||+|+++||||+|||||++||++++++.+|+.++.++|+.|+++||+++.++|+.. |+++|+||+|++|+++++++++
T Consensus 556 Iwn~n~~tGViG~FNcqGagw~~~~~~~~~~~~~~~~~s~~v~~~Dv~~~~~~a~~~~w~~~~~vy~h~s~~l~~l~~~~ 635 (750)
T PLN02684 556 IWNMNKYTGVLGVYNCQGAAWSSTERKNIFHQTKTDSLTGSIRGRDVHLIAEAATDPNWNGDCAVYCHSRGELITMPYNA 635 (750)
T ss_pred EEEecCCCceEEEEeccCCccCccccccccCCCCCccceeeecccccchhhhhccCCCCCCCEEEEEecCCeEEecCCCC
Confidence 999999999999999999999999999999999999999999999999999999874 9999999999999999999999
Q ss_pred eEeEEecCCcEEEEEEeeeeeecCceeEEEehhhhhhcCCCceeEEEEEeccCCCCCCCCCcccccccccCCCCCCceEE
Q 003500 677 SVPVTLKVLEYELFHFCPLKEISSNISFAAIGLLDMFNSGGAVENVEVHMSEKKPDLFDGEVSSELTTSLSDNRSPTATI 756 (815)
Q Consensus 677 ~~~v~L~~~~~ei~t~~Pv~~~~~~~~~A~iGL~~k~~~~~AV~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v 756 (815)
.++|+|++++|||||+|||+++.++++||||||+||||++|||+++++.. . ..+|
T Consensus 636 ~~~vtL~~~~~Ei~t~~Pv~~~~~~~~fApiGL~~m~n~ggAi~~~~~~~-----------------------~--~~~v 690 (750)
T PLN02684 636 SLPVSLKVLEHEIFTVTPIKHLAPGFSFAPLGLINMYNAGGAIEGLKYEV-----------------------K--KGKV 690 (750)
T ss_pred ceEEEecCCcEEEEEEeeEEEecCCcEEEecchhhcccCcceEEEEEEec-----------------------c--cceE
Confidence 99999999999999999999999899999999999999999999999874 1 2349
Q ss_pred EEEEEeeceeEEEEcCCCceeEECCeEeeEEEeCCceeEEEEccCCccCcc-eeeeEEeC
Q 003500 757 SLKVRGCGRFGIYSSQRPLKCTVGSIQTDFTYDSATGLMTMTLPVPEEEMY-RWPVEIQV 815 (815)
Q Consensus 757 ~v~vkg~G~fg~YsS~~P~~c~vdg~~~~f~y~~~~gl~t~~l~~~~~~~~-~~~v~i~~ 815 (815)
+|+|||||+||+|||++|++|.|||++++|+|++++|+|+|+||||+++++ +|+|||++
T Consensus 691 ~v~vkg~G~~g~YsS~~P~~c~v~~~~~~f~y~~~~g~~~~~~~~~~~~~~~~~~v~~~~ 750 (750)
T PLN02684 691 VMEVKGCGKFGAYSSVKPRRCVVESNEIAFEYDSSSGLVTFELDKMPEEGKRLHLVEVEL 750 (750)
T ss_pred EEEEEecceeEEEEcCCCcEEEECCEEEeeEEcCCCCeEEEEcCCCccccCcceEEEEeC
Confidence 999999999999999999999999999999999999999999999999999 99999974
No 3
>PLN02355 probable galactinol--sucrose galactosyltransferase 1
Probab=100.00 E-value=8.4e-213 Score=1807.41 Aligned_cols=749 Identities=64% Similarity=1.157 Sum_probs=719.9
Q ss_pred ccccceeeeeCcEEEEeCeecccCCCCCeEEeecCCCccccceeeecccCCCCcceeeeCCCccCceeEEEeeeccCccc
Q 003500 42 MTVAPNISISDGNLVVHGKTILTGVPDNIILTPGNGVGLVAGAFIGATASHSKSLHVFPMGVLEDLRFMCCFRFKLWWMT 121 (815)
Q Consensus 42 ~~~~~~~~~~~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~lG~~~~~r~~~l~r~k~~W~~ 121 (815)
|||++.|+++||+|+|+|+++|++||+||+++|.+....+.|+|+||++++++|||++|||+++++|||||||||+|||+
T Consensus 1 mt~~~~~~~~~~~l~v~g~~~l~~vp~nv~~t~~~~~~~~~g~f~g~~~~~~~srhv~~~G~l~~~rf~~~frfK~WWmt 80 (758)
T PLN02355 1 MTVGAGISVADGNLVVLGNRVLHDVHDNVLVTPASGGALINGAFIGVRSDQVGSRRVFPVGKLEDLRFMCVFRFKLWWMT 80 (758)
T ss_pred CcccceeEEeCCeEEECCEEeeccCCCceEecCCCCCCcCcceEEeeecCCCccceeeecccccCcEeeeeehhhhhhcc
Confidence 99999999999999999999999999999999998777789999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCcccEEEEEecCCCCCCCC--CC---CCeEEEEEEEeecCceEEEeecCCCCeEEEEEecCCcceecccc
Q 003500 122 QRMGTCGKDVPLETQFMLVESKDNSESDQ--DD---GPTIYTVFLPLLEGQFRSALQGNENNEIEICLESGDNAVETNQG 196 (815)
Q Consensus 122 pr~g~~~~~ip~etq~ll~e~~~~~~l~~--~~---~~~~y~v~Lp~~~g~~ra~L~~~~~~~~~i~~~sg~~~~~~~~~ 196 (815)
||+|++++|||.||||||+|.++++++.. |+ +++.|+|+|||++|+|||+||++++++++||+|||+..++++++
T Consensus 81 ~~~G~~g~dip~eTQ~ll~e~~~~~~~~~~~~~~~~~~~~Y~v~lPi~~g~fra~Lqg~~~~~l~ic~eSG~~~v~~~~~ 160 (758)
T PLN02355 81 QRMGTCGQDIPFETQFLIVEARDGSHLGNGGEGGEDQSSVYTVFLPILEGDFRAVLQGNEHNELEICLESGDPAVDEFEG 160 (758)
T ss_pred ccccCCCcCCChhheEEEEEcCCcccccccccccCCCCceeEEEEeecCCceEEEEecCCCCcEEEEEEcCCCccccccC
Confidence 99999999999999999999998655431 11 34579999999999999999999999999999999999999999
Q ss_pred ceEEEEEeCCChHHHHHHHHHHHHHHhhcccccccccCCCcccccccccccccccccCHHHHHHHHHHHHhCCCCCcEEE
Q 003500 197 LYLVYTHAGPNPFEVISQAVKAVEKYMQTFTHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLI 276 (815)
Q Consensus 197 ~~~v~v~~g~dp~~~i~~A~~~v~~~l~tf~~~~~K~~P~~~d~lGWCTWdaf~~~vte~~I~~~l~~L~~~Gi~~~~vI 276 (815)
.++||+++|+|||++|++|++++++|++||++|++|++|+++|+||||||||||++|||++|++++++|+++|+|++|||
T Consensus 161 ~~~v~v~~g~dpy~li~~a~~~v~~hl~tf~~re~K~~P~~ld~~GWCTW~afy~~Vt~~~I~~~l~~l~~~g~p~~~vi 240 (758)
T PLN02355 161 SHLVFVAAGSDPFDVITNAVKAVEKHLQTFSHRERKKMPDMLNWFGWCTWDAFYTNVTAEGVKQGLESLEKGGVTPKFVI 240 (758)
T ss_pred ceEEEEEcCCCHHHHHHHHHHHHHHHhccccchhhccCCcccceeeEEehhHhhccCCHHHHHHHHHHHHhCCCCccEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecccCcccCCCCcccchhhccccccccccCCCccCCccccc-c---cCCcCCCChHHHHHHHHhcCCCcEEEEEeeccc
Q 003500 277 IDDGWQQIENKPKEESNCIVQEGAQFASRLTGIKENSKFQKK-C---QNSEQVSGLKHVVDESKQNHNVKYVYVWHALAG 352 (815)
Q Consensus 277 IDDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~n~KFp~~-~---~~~~~p~GLk~lv~~Ik~~~Glk~vgvWHal~G 352 (815)
||||||+...+.+ +.++.+.++.||++||.+|++|.|||+. . ..+.+|.|||++|+.||+++|||||||||||+|
T Consensus 241 IDDGwQs~~~d~~-~~~~~~~~~~q~~~rL~~f~~n~KF~~~~~~~~~~~~~~~Glk~~V~~iK~~~~vk~V~VWHAL~G 319 (758)
T PLN02355 241 IDDGWQSVGMDPT-GIECLADNSANFANRLTHIKENHKFQKNGKEGHRVDDPALGLGHIVTEIKEKHSLKYVYVWHAITG 319 (758)
T ss_pred Eeccccccccccc-cccccccccchhhhhhccccccccccccccccccccCCCCcHHHHHHHHHhhcCCcEEEEeeeecc
Confidence 9999999877643 4567788899999999999999999942 1 123347899999999999999999999999999
Q ss_pred ccCCcCCCCcccccccccccccCCCCCCCCCCCcceeccccccccCccCHHHHHHHHHHHHHHHHhcCCCEEEEccccch
Q 003500 353 YWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHGLGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNII 432 (815)
Q Consensus 353 YWgGI~P~s~~~~~y~~~~~~p~~spG~~~~~pd~a~d~~~~~glglv~p~~a~~fYd~l~~~Las~GVD~VKvD~q~~l 432 (815)
|||||+|+++++++|+++++||+.+||+..++|+++++++..+|+++++|+++++|||+||+||+++||||||||+|+.+
T Consensus 320 YWGGv~P~~~~~~~Y~~~~~~p~~spGv~~~~~~~a~d~i~~~G~glv~Pe~~~~FY~~~hsyL~s~GVDgVKVD~Q~~l 399 (758)
T PLN02355 320 YWGGVKPGVAGMEHYESKMSYPVSSPGVQSNEPCDALESITTNGLGLVNPEKVFSFYNELHSYLASAGIDGVKVDVQNIL 399 (758)
T ss_pred eecCcCCCCcccccccccccccccCCcccccCcchhhhhcccCceeccCHHHHHHHHHHHHHHHHHcCCCeEEEchhhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccCCCCCchhHHHHHHHHHHHHHHhcCCCCcEEeeccCCCCCcccccccCeEEccCccCCCCccchhhHHHHhhhhhh
Q 003500 433 ETLGAGHGGRVSLTRSYHQALEASIARNFPDNGCISCMCHNTDGIYSSKQTAVIRASDDYYPRDPASHTIHISSVAYNTL 512 (815)
Q Consensus 433 ~~l~~~~~grv~l~~ay~~AL~~s~~~~f~g~~iI~cMs~~~~~l~~~~~~~~~R~SdDf~p~~p~~~~~Hi~~na~nsl 512 (815)
++++.++++|++++++||+||++|++|||+++++|+||||+++++|++++++++|+||||||++|++|++||++||||||
T Consensus 400 e~l~~g~ggrv~la~~y~~ALe~S~~r~F~~ngvI~CMs~~~d~i~~~k~sav~R~SDDF~P~dP~sh~~Hi~~~AyNSL 479 (758)
T PLN02355 400 ETLGAGHGGRVKLARKYHQALEASIARNFPDNGIISCMSHNTDGLYSAKRTAVIRASDDFWPRDPASHTIHIASVAYNTI 479 (758)
T ss_pred HHhhcCCCcHHHHHHHHHHHHHHHHHHhCCCCceEEecccCchhhcccccceeeeeccccccCCCccCchhhhhhhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCccccCCChhHHHHHHHHHhcCCcEEeecCCCCCcHHHHhhhcCCCCceeecCCCCCCCccccccCcCCCC
Q 003500 513 FLGEFMQPDWDMFHSLHPAAEYHGAARAVGGCAIYVSDKPGNHNFDLLRKLVLPDGSVLRAQLPGRPTRDCLFADPARDG 592 (815)
Q Consensus 513 ~~g~~~~PDwDMf~s~h~~a~~HaaaraisGgPvyiSD~pg~hd~~lL~~Lv~pdG~ilR~~~pg~pt~d~lf~dp~~d~ 592 (815)
|||+++|||||||||.||+|+|||++||||||||||||+||+|||+|||+||+|||+||||++||||||||||.||++|+
T Consensus 480 llg~~v~PDWDMF~S~hp~A~~HAaaRAisGGPIYvSD~PG~hdf~LLk~LvlpdGsIlR~~~pg~PtrDclF~Dp~~dg 559 (758)
T PLN02355 480 FLGEFMQPDWDMFHSLHPMAEYHAAARAVGGCAIYVSDKPGQHDFNLLKKLVLPDGSILRAKLPGRPTRDCLFSDPARDG 559 (758)
T ss_pred hhccccccCcccceecCccHHHHHHHHhccCCcEEEecCCCCccHHHHHhhhCCCCceeccccCCCcchhhhccccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEEEeecCCcceEEEEeecCCccccccccccccCCCCcceeeeeecccchhhhhhhCCCCCCcEEEEEeccceEEec
Q 003500 593 TSLLKVWNVNKCSGVVGVFNCQGAGWCKITKKTRIHDESPGTLTASVRVTDVENMAQIAGAGWNGDAIVYAHRSGEVVRL 672 (815)
Q Consensus 593 ~~lLkiwn~~~~~gvlg~FN~~ga~w~~~~~~~~~~~~~~~~~s~~v~~~D~~~~~~~~~~~~~~~~vvy~~~sg~l~~l 672 (815)
+++|||||+|+++||||+|||||++||+++++|++|++++.++++.|++.||+++.++++++|+++++||+|++|++.++
T Consensus 560 ~slLKIwn~nk~sGviG~FNcqGagw~~~~~~~~~~~~~~~~l~~~v~~~Dv~~~~~~a~~~w~~~~~vy~~~sg~l~~~ 639 (758)
T PLN02355 560 KSLLKIWNLNEFTGVIGVFNCQGAGWCRVGKKNLIHDEQPGTITGVIRAKDVDYLPKVADDEWTGDSIVYSHLGGEVVYL 639 (758)
T ss_pred ceEEEEEEcCCcccEEEEEeccCCcccchhccccccCCCCceeEEEEccccccchhhccccCCCCCeEEEEecCceEEec
Confidence 99999999999999999999999999999999999999999999999999999999999988999999999999999999
Q ss_pred CCCCeEeEEecCCcEEEEEEeeeeeecCceeEEEehhhhhhcCCCceeEEEEEeccCCCCCCCCCcccccccccCCCCCC
Q 003500 673 PKGASVPVTLKVLEYELFHFCPLKEISSNISFAAIGLLDMFNSGGAVENVEVHMSEKKPDLFDGEVSSELTTSLSDNRSP 752 (815)
Q Consensus 673 ~~~~~~~v~L~~~~~ei~t~~Pv~~~~~~~~~A~iGL~~k~~~~~AV~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 752 (815)
++++.++|+|++++|||||+|||+++.++++||||||+||||++|||+++++.. .+
T Consensus 640 ~~~~~~~vtL~~~~~eiftv~Pi~~~~~~~~fApIGL~~m~nsggAV~~~~~~~------------------------~~ 695 (758)
T PLN02355 640 PKDASLPVTLKSREYEVFTVVPVKELSNGVKFAPIGLVKMFNSGGAIKELRYDE------------------------DT 695 (758)
T ss_pred CCCCceEEEecCCceEEEEEeeEEEecCCcEEEEeehhhhccCcceEEEEEeec------------------------cc
Confidence 889999999999999999999999999899999999999999999999999863 24
Q ss_pred ceEEEEEEEeeceeEEEEcCCCceeEECCeEeeEEEeCCceeEEEEccCCccCcceeeeEEeC
Q 003500 753 TATISLKVRGCGRFGIYSSQRPLKCTVGSIQTDFTYDSATGLMTMTLPVPEEEMYRWPVEIQV 815 (815)
Q Consensus 753 ~~~v~v~vkg~G~fg~YsS~~P~~c~vdg~~~~f~y~~~~gl~t~~l~~~~~~~~~~~v~i~~ 815 (815)
+.+++|+|||||+||+|||.+|++|.|||.|++|+|++++|||+|+||||++++++|.|||+|
T Consensus 696 ~~~v~v~vkg~G~~g~YsS~~P~~c~vd~~~~~f~y~~~~g~~~~~~~~~~~~~~~~~~~~~~ 758 (758)
T PLN02355 696 NATVRMKVRGSGLVGAYSSSRPRRVTVDSKEVEFRYEEGSGLVTFDLGVPEEELYLWNVTVEL 758 (758)
T ss_pred ccEEEEEEEecceEEEEecCCCcEEEECCeEeeeEEcCCCCeEEEEcCCCcccCceeEEEEeC
Confidence 567999999999999999999999999999999999999999999999999999999999986
No 4
>PLN02982 galactinol-raffinose galactosyltransferase/ghydrolase, hydrolyzing O-glycosyl compounds
Probab=100.00 E-value=2.2e-210 Score=1776.01 Aligned_cols=737 Identities=38% Similarity=0.714 Sum_probs=698.6
Q ss_pred cccceeeeeCcEEEEeCeecccCCCCCeEEeecCCC-----cc-----------ccceeeecccCCCCcceeeeCCCccC
Q 003500 43 TVAPNISISDGNLVVHGKTILTGVPDNIILTPGNGV-----GL-----------VAGAFIGATASHSKSLHVFPMGVLED 106 (815)
Q Consensus 43 ~~~~~~~~~~g~l~~~~~~~l~~~~~~~~~~~~~~~-----~~-----------~~g~~~~~~~~~~~~~~~~~lG~~~~ 106 (815)
+.+..|+++||+|+|+|+++|++||+||+++|+++. ++ +.|+|+||++++++|||+++||++++
T Consensus 19 ~~~~~~~l~~g~l~v~G~~~L~~Vp~NV~~tp~s~~~~~~~~p~~~~~~~~~~~~~g~FlG~~~~~~~srhv~~lG~l~~ 98 (865)
T PLN02982 19 PSPNYFDLSDGKLSVKGVPLLSDVPNNVTFTPFSSISISSDAPLPLLQRVQSNSHKGGFLGFTKESPSDRLTNSLGKFEG 98 (865)
T ss_pred CCCceeEecCCeEEECCEEeecCCCCceEecCcccccccccCccccccccccccccceEEeeecCCCccceeeecccccC
Confidence 346789999999999999999999999999996542 22 56999999999999999999999999
Q ss_pred ceeEEEeeeccCccccccCCCCCCCCcccEEEEEecCCCCCCCCCCCCeEEEEEEEeecCceEEEeecCCCCeEEEEEec
Q 003500 107 LRFMCCFRFKLWWMTQRMGTCGKDVPLETQFMLVESKDNSESDQDDGPTIYTVFLPLLEGQFRSALQGNENNEIEICLES 186 (815)
Q Consensus 107 ~r~~~l~r~k~~W~~pr~g~~~~~ip~etq~ll~e~~~~~~l~~~~~~~~y~v~Lp~~~g~~ra~L~~~~~~~~~i~~~s 186 (815)
+|||||||||+|||+||+|++++|||.||||||+|.+++. .|+|+||+++|.|||+||++.+++++||+||
T Consensus 99 ~rFms~FRfK~WWmt~~vG~~G~Dip~ETQ~llle~~~~~---------~Yvv~lP~ieG~FRa~Lqg~~~~~~~ic~ES 169 (865)
T PLN02982 99 RDFLSIFRFKTWWSTMWIGSSGSDLQMETQWVLLKVPEID---------SYVLIIPLIEGSFRSALHPGEDGHVMICAES 169 (865)
T ss_pred ceEEeeeehhhhccchhhcCCCCCCChhheEEEEEcCCCc---------eEEEEEEecCCceEEEecCCCCCCEEEEEec
Confidence 9999999999999999999999999999999999999743 6999999999999999999999999999999
Q ss_pred CCcceeccccceEEEEEeCCChHHHHHHHHHHHHHHhhcccccccccCCCcccccccccccccccccCHHHHHHHHHHHH
Q 003500 187 GDNAVETNQGLYLVYTHAGPNPFEVISQAVKAVEKYMQTFTHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLS 266 (815)
Q Consensus 187 g~~~~~~~~~~~~v~v~~g~dp~~~i~~A~~~v~~~l~tf~~~~~K~~P~~~d~lGWCTWdaf~~~vte~~I~~~l~~L~ 266 (815)
|+++|+++++..++|||+|+|||++|++|++++|.|++||+++++|++|.++|+||||||||||++||+++|++++++|+
T Consensus 170 g~~~V~~s~~~~~~yvh~g~nPy~li~~a~~~v~~hl~TF~~~eeK~~P~~vd~FGWCTWDAFY~~V~p~GV~~Gv~~l~ 249 (865)
T PLN02982 170 GSTKVKASSFNSIAYVHVSDNPYNLMKEAYSALRVHLNTFRLLEEKALPKIVDKFGWCTWDAFYLTVDPVGVWHGVKEFA 249 (865)
T ss_pred CCccccccccceEEEEecCCCHHHHHHHHHHHHHHHhcccchhhhccCccccccceEEeechhhcccCHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCCCcEEEEecccCcccCCCC---cccchhhccccccccccCCCccCCccccccc-----------------------
Q 003500 267 AGGTPPKFLIIDDGWQQIENKPK---EESNCIVQEGAQFASRLTGIKENSKFQKKCQ----------------------- 320 (815)
Q Consensus 267 ~~Gi~~~~vIIDDGWQ~~~~~~~---~~~~~~~~~~~~~~~~L~~~~~n~KFp~~~~----------------------- 320 (815)
++|+||+|||||||||++..+.+ ++.++.+.+|.||.+||.+|++|+||++++.
T Consensus 250 ~gG~pprfvIIDDGWQsi~~d~~~~~~~~~~~~~~g~q~~~RL~~~~En~KFrky~~~~~~~~~~~~f~~~~~~~~i~~~ 329 (865)
T PLN02982 250 EGGVPPRFLIIDDGWQSINFDGDNPNEDAKNLVLGGTQMTARLYRFDECEKFRNYKGGSMLGPDPPHFDPKKPKMLIYKA 329 (865)
T ss_pred cCCCCccEEEEecchhhccccccCCchhhhhccccccchhhhhhcchhhhhhhccccccccCCCcccccccccchhhhcc
Confidence 99999999999999999987632 2456788999999999999999999996321
Q ss_pred -------------------------------------------------------CCcCCCChHHHHHHHHhcC-CCcEE
Q 003500 321 -------------------------------------------------------NSEQVSGLKHVVDESKQNH-NVKYV 344 (815)
Q Consensus 321 -------------------------------------------------------~~~~p~GLk~lv~~Ik~~~-Glk~v 344 (815)
++..|.|||++|+.||++| |||||
T Consensus 330 ~~~~~a~~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Glk~~v~~ik~k~~~vk~V 409 (865)
T PLN02982 330 IEREHAEKARKKAIESGVTDLSEFDAKIKQLKKELDAMFDGEEKSVSSESESSGSCKVSGSGMKAFTRDLRTKFKGLDDI 409 (865)
T ss_pred cchhhhhhcccccccccccccchhhhhhhhhhhhccccccccccccccccccccccccCcccHHHHHHHHHHhCCCCCEE
Confidence 1345679999999999999 59999
Q ss_pred EEEeecccccCCcCCCCcccccccccccccCCCCCCCCCCCcceeccccccccCccCHHHHHHHHHHHHHHHHhcCCCEE
Q 003500 345 YVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHGLGLVHPKKVFNFYNELHAYLASCGVDGV 424 (815)
Q Consensus 345 gvWHal~GYWgGI~P~s~~~~~y~~~~~~p~~spG~~~~~pd~a~d~~~~~glglv~p~~a~~fYd~l~~~Las~GVD~V 424 (815)
||||||+||||||+|++ ++|++++++|+.+||+.+++||+++|++..+|+++++|+++++|||+||+||+++|||||
T Consensus 410 yVWHAL~GYWGGV~P~~---~~y~~k~~~p~~spg~~~~~~d~a~d~i~~~G~glv~P~~~~~FYd~~hsyLas~GVDgV 486 (865)
T PLN02982 410 YVWHALCGAWGGVRPGT---THLNAKVVPARLSPGLDGTMNDLAVDKIVEGGIGLVHPSQAGDFYDSMHSYLASVGITGV 486 (865)
T ss_pred EEeeeccCcccCcCCCC---CCCcceEEecccCccccccCcchhhhheecCceeccCHHHHHHHHHHHHHHHHHcCCCeE
Confidence 99999999999999986 679999999999999999999999999999999999999999999999999999999999
Q ss_pred EEccccchhhccCCCCCchhHHHHHHHHHHHHHHhcCCCCcEEeeccCCCCCcc-cccccCeEEccCccCCCCccchh--
Q 003500 425 KVDVQNIIETLGAGHGGRVSLTRSYHQALEASIARNFPDNGCISCMCHNTDGIY-SSKQTAVIRASDDYYPRDPASHT-- 501 (815)
Q Consensus 425 KvD~q~~l~~l~~~~~grv~l~~ay~~AL~~s~~~~f~g~~iI~cMs~~~~~l~-~~~~~~~~R~SdDf~p~~p~~~~-- 501 (815)
|||+|+.|+++++++++|++++++||+||++|+++||++|++|+||||+++++| +.+++++.|+||||||++|++|+
T Consensus 487 KVDvQ~~Le~L~~~~ggRv~La~ay~~al~~Sv~r~F~~ng~I~CM~~~~~~~~~~tk~sav~R~SDDF~p~dP~shp~g 566 (865)
T PLN02982 487 KVDVIHTLEYVCEEYGGRVELAKAYYDGLSESLAKNFNGTGIIASMQQCNDFFFLGTKQISMGRVGDDFWFQDPNGDPMG 566 (865)
T ss_pred EEchhhhHHHhhccCCcHHHHHHHHHHHHHHHHHHhCCCCCeEeecccCchhhhccCCcceeeeccccccCCCCCcCccc
Confidence 999999999999999999999999999999999999999999999999999988 56888999999999999999988
Q ss_pred ------hHHHHhhhhhhhccCCCCCCCccccCCChhHHHHHHHHHhcCCcEEeecCCCCCcHHHHhhhcCCCCceeecCC
Q 003500 502 ------IHISSVAYNTLFLGEFMQPDWDMFHSLHPAAEYHGAARAVGGCAIYVSDKPGNHNFDLLRKLVLPDGSVLRAQL 575 (815)
Q Consensus 502 ------~Hi~~na~nsl~~g~~~~PDwDMf~s~h~~a~~HaaaraisGgPvyiSD~pg~hd~~lL~~Lv~pdG~ilR~~~ 575 (815)
+||++|||||||||+++|||||||||.||+|+|||++||||||||||||+||+|||+|||+||+|||+||||++
T Consensus 567 ~~wlq~~Hi~~~AyNSLl~G~~v~PDWDMFqS~H~~A~fHAaaRAIsGGPIYvSD~pG~Hdf~lLk~LvlpDG~IlR~~~ 646 (865)
T PLN02982 567 VYWLQGVHMIHCAYNSMWMGQIIQPDWDMFQSDHLCAEFHAGSRAICGGPVYVSDSVGGHDFDLLKKLVFPDGTIPRCQH 646 (865)
T ss_pred cccccceeeeehhhhhHhhccccccCchhccccCchHHHHHHHHhhcCCCEEEeeCCCCccHHHHHhhhcCCCceeccCC
Confidence 49999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccccCcCCCCcceEEEEeecCCcceEEEEeecCCccccccccccccCCCCcceeeeeecccchhhh--hhhCC
Q 003500 576 PGRPTRDCLFADPARDGTSLLKVWNVNKCSGVVGVFNCQGAGWCKITKKTRIHDESPGTLTASVRVTDVENMA--QIAGA 653 (815)
Q Consensus 576 pg~pt~d~lf~dp~~d~~~lLkiwn~~~~~gvlg~FN~~ga~w~~~~~~~~~~~~~~~~~s~~v~~~D~~~~~--~~~~~ 653 (815)
||+|||||||.||++|++++|||||+|+++||||+|||||++||++++++++|++++.++|+.|+++||++.. +.++.
T Consensus 647 pg~PTrDcLF~DPl~DGks~LKIWN~Nk~~GViG~FNCQGagW~~~~~~~~~~~~~~~~vtg~v~~~Dve~~~~~~~a~~ 726 (865)
T PLN02982 647 YALPTRDCLFKNPLFDKKTILKIWNFNKFGGVIGAFNCQGAGWDPKEHRIKGYSECYKPVSGSVHVSDIEWDQKPEASQM 726 (865)
T ss_pred CCCCCcchhccCcccCCceEEEEEeccCcCceEEEEEeccCCCCchhccccccCCCCcceEEEEcHHHcccccccccccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999985 45667
Q ss_pred CCCCcEEEEEeccceEEecCC-CCeEeEEecCCcEEEEEEeeeeeecCceeEEEehhhhhhcCCCceeEEEEEeccCCCC
Q 003500 654 GWNGDAIVYAHRSGEVVRLPK-GASVPVTLKVLEYELFHFCPLKEISSNISFAAIGLLDMFNSGGAVENVEVHMSEKKPD 732 (815)
Q Consensus 654 ~~~~~~vvy~~~sg~l~~l~~-~~~~~v~L~~~~~ei~t~~Pv~~~~~~~~~A~iGL~~k~~~~~AV~~~~~~~~~~~~~ 732 (815)
+|+++++||+++++++.++.+ ++.++|+|++++|||||+|||+.+.++++||||||+||||+||||+++++...
T Consensus 727 ~~~~~~~vY~~~~~el~~~~~~~~~~~vtL~~~e~elftv~PI~~~~~~i~FApIGL~nM~NSgGAV~~~~~~~~----- 801 (865)
T PLN02982 727 GEAEEYAVYLNQAEELLLMTPKSEAIQITLQPSSFELFSFVPVTKLGSSAKFAPIGLTNMFNSGGTIQEMEYGES----- 801 (865)
T ss_pred CCcccEEEEEecCceEEEecCCCCcceEEeccceeEEEEEeeeEEccCCcceeeeehHhhccCCceeEEeeeccC-----
Confidence 799999999999999998654 79999999999999999999999998999999999999999999999987521
Q ss_pred CCCCCcccccccccCCCCCCceEEEEEEEeeceeEEEEcCCCceeEECCeEeeEEEeCCceeEEEEccCCccCcceeeeE
Q 003500 733 LFDGEVSSELTTSLSDNRSPTATISLKVRGCGRFGIYSSQRPLKCTVGSIQTDFTYDSATGLMTMTLPVPEEEMYRWPVE 812 (815)
Q Consensus 733 ~~~~g~~~~~~~~~~~~~~~~~~v~v~vkg~G~fg~YsS~~P~~c~vdg~~~~f~y~~~~gl~t~~l~~~~~~~~~~~v~ 812 (815)
+++.+++|+|||||+|++|||.+|++|.|||++++|+|+++ |+|+|+||||++++++|+||
T Consensus 802 ------------------g~~~~v~v~VrG~G~f~~Yss~~P~~c~vdg~ev~F~y~~~-g~l~~~lp~~~~~~~~~~v~ 862 (865)
T PLN02982 802 ------------------GGECSVKVKVKGGGRFLAYSSEAPKKCYLNGKEVGFEWEEE-GKLSFFVPWTEESGGISDVS 862 (865)
T ss_pred ------------------CccceEEEEEEecceEEEEecCCCeEEEECCeEeeeEECCC-CeEEEEccCCcccCceeeEE
Confidence 13456999999999999999999999999999999999997 99999999999999999999
Q ss_pred EeC
Q 003500 813 IQV 815 (815)
Q Consensus 813 i~~ 815 (815)
|+|
T Consensus 863 ~~~ 865 (865)
T PLN02982 863 FIF 865 (865)
T ss_pred EeC
Confidence 986
No 5
>PLN02711 Probable galactinol--sucrose galactosyltransferase
Probab=100.00 E-value=1e-206 Score=1752.88 Aligned_cols=740 Identities=39% Similarity=0.744 Sum_probs=696.2
Q ss_pred ccccccccceeeeeCcEEEEeCeecccCCCCCeEEeecCCCccc------cceeeecccCCCCcceeeeCCCccCceeEE
Q 003500 38 RRSKMTVAPNISISDGNLVVHGKTILTGVPDNIILTPGNGVGLV------AGAFIGATASHSKSLHVFPMGVLEDLRFMC 111 (815)
Q Consensus 38 ~~~~~~~~~~~~~~~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~~~~~~lG~~~~~r~~~ 111 (815)
....||+++.|+++||+|+|+|+++|++||+||+++|.+..... .|+|+||++++++|||+++||+++++||||
T Consensus 14 ~~~~~~~~~~~~l~~~~l~v~g~~~l~~vp~nv~~tp~~~~~~~~~~~~~~g~flG~~~~~~~srhv~~~G~l~~~rfm~ 93 (777)
T PLN02711 14 GLVDGLNPSLITLEGSNFLANGHPFLSDVPDNITLTPSPYLPDNKPITVGAGSFVGFDAGEPKSRHVVPIGKLKNIRFMS 93 (777)
T ss_pred ccccccccceEEEeCCeEEECCEEeecCCCCceEecCCCCcccccccccccceEEeeecCCCCcceeeecccccCcEeee
Confidence 44569999999999999999999999999999999998754322 599999999999999999999999999999
Q ss_pred EeeeccCccccccCCCCCCCCcccEEEEEecCCCCCCCCCCCCeEEEEEEEeecCceEEEeecCCCCeEEEEEecCCcce
Q 003500 112 CFRFKLWWMTQRMGTCGKDVPLETQFMLVESKDNSESDQDDGPTIYTVFLPLLEGQFRSALQGNENNEIEICLESGDNAV 191 (815)
Q Consensus 112 l~r~k~~W~~pr~g~~~~~ip~etq~ll~e~~~~~~l~~~~~~~~y~v~Lp~~~g~~ra~L~~~~~~~~~i~~~sg~~~~ 191 (815)
|||||+|||+||+|++++|||.||||||+|.+++ .+.|+|+|||++|.|||+||++.+++++||+|||++++
T Consensus 94 ~fRfK~WWmt~~~G~~g~dip~eTQ~ll~e~~~~--------~~~y~~~lP~~eg~fRa~Lq~~~~d~~~ic~esg~~~v 165 (777)
T PLN02711 94 IFRFKVWWTTHWVGSNGRDVENETQMMILDKSDS--------GRPYVLLLPLIEGPFRASLQPGEDDNVDICVESGSTKV 165 (777)
T ss_pred eehhhhhccchhhcCCCCCCChhheEEEEEccCC--------CceEEEEEeecCCceEEEecCCCCCcEEEEEecCCcce
Confidence 9999999999999999999999999999999852 13699999999999999999999999999999999999
Q ss_pred eccccceEEEEEeCCChHHHHHHHHHHHHHHhhcccccccccCCCcccccccccccccccccCHHHHHHHHHHHHhCCCC
Q 003500 192 ETNQGLYLVYTHAGPNPFEVISQAVKAVEKYMQTFTHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTP 271 (815)
Q Consensus 192 ~~~~~~~~v~v~~g~dp~~~i~~A~~~v~~~l~tf~~~~~K~~P~~~d~lGWCTWdaf~~~vte~~I~~~l~~L~~~Gi~ 271 (815)
+++++.++|||++|+|||++|++|++++++|++||++|++|++|+++|+||||||||||++|||++|++++++|+++|+|
T Consensus 166 ~~~~~~~~~~i~~g~~Py~~i~~A~~~~~~~l~tf~~reeK~~P~~~D~fGWCTWdAfy~~Vt~egI~~gl~~L~~~Gip 245 (777)
T PLN02711 166 CGSEFRSVLYMHAGDDPYKLVKDAMKVVRVHLGTFKLLEEKTPPGIVDKFGWCTWDAFYLTVHPQGVWEGVKGLVDGGCP 245 (777)
T ss_pred eccccceEEEEEcCCCHHHHHHHHHHHHHHHhcccchhhhccCCcccccceEEehhHhcccCCHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEecccCcccCCCC----cccchhhccccccccccCCCccCCccccccc-CCcCCCChHHHHHHHHhcCC-CcEEE
Q 003500 272 PKFLIIDDGWQQIENKPK----EESNCIVQEGAQFASRLTGIKENSKFQKKCQ-NSEQVSGLKHVVDESKQNHN-VKYVY 345 (815)
Q Consensus 272 ~~~vIIDDGWQ~~~~~~~----~~~~~~~~~~~~~~~~L~~~~~n~KFp~~~~-~~~~p~GLk~lv~~Ik~~~G-lk~vg 345 (815)
++|||||||||+++++.+ ++.++.+.+|+||.+||.+|++|.||++... +..||.|||++|+.||++|+ |||||
T Consensus 246 ~~~vIIDDGWQsi~~d~~~~~~~~~~~~~~~g~q~~~rL~~f~en~KF~~~~~~~~~~p~Glk~~v~~iK~~~~~vk~Vy 325 (777)
T PLN02711 246 PGLVLIDDGWQSICHDEDPISDQEGMNRTVAGEQMPCRLLKFEENYKFRDYVSPKSLSNKGMGAFIRDLKEEFKTVDYVY 325 (777)
T ss_pred ccEEEEcCCcccccccCcccccccccccccccchhhhhhccccccccccccccccCCCCCcHHHHHHHHHhhCCCCCEEE
Confidence 999999999999877532 2345778889999999999999999996432 45789999999999999985 99999
Q ss_pred EEeecccccCCcCCCCcccccccccccccCCCCCCCCCCCcceeccccccccCccCHHHHHHHHHHHHHHHHhcCCCEEE
Q 003500 346 VWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHGLGLVHPKKVFNFYNELHAYLASCGVDGVK 425 (815)
Q Consensus 346 vWHal~GYWgGI~P~s~~~~~y~~~~~~p~~spG~~~~~pd~a~d~~~~~glglv~p~~a~~fYd~l~~~Las~GVD~VK 425 (815)
|||||+||||||+|++++++ ++++++|+.+||+..++||+++|++..+|+++++|+++++|||++|+||+++||||||
T Consensus 326 VWHAL~GYWGGv~P~~~~~~--~~~~~~p~~spg~~~~~~d~~~d~~~~~g~glv~Pe~~~~FY~~~hs~Las~GVDgVK 403 (777)
T PLN02711 326 VWHALCGYWGGLRPNVPGLP--ESKVVAPKLSPGLKMTMEDLAVDKIVNNGVGLVPPELAYQMYEGLHSHLQSVGIDGVK 403 (777)
T ss_pred EeeeccCcccCcCCCCCCCc--cceeeccccCcccccccccccccccccCcccccCHHHHHHHHHHHHHHHHHcCCCeEE
Confidence 99999999999999998776 6778899999999999999999999999999999999999999999999999999999
Q ss_pred EccccchhhccCCCCCchhHHHHHHHHHHHHHHhcCCCCcEEeeccCCCCCccc-ccccCeEEccCccCCCCccchh---
Q 003500 426 VDVQNIIETLGAGHGGRVSLTRSYHQALEASIARNFPDNGCISCMCHNTDGIYS-SKQTAVIRASDDYYPRDPASHT--- 501 (815)
Q Consensus 426 vD~q~~l~~l~~~~~grv~l~~ay~~AL~~s~~~~f~g~~iI~cMs~~~~~l~~-~~~~~~~R~SdDf~p~~p~~~~--- 501 (815)
||+|+.|+++++++++|++++++||+||++|++|||+++++|+||||+++++|+ ++++++.|+||||||++|++|+
T Consensus 404 VDvQ~~Le~l~~~~Ggrv~la~ay~~ALe~S~~r~F~~ng~I~CMs~~~d~~~~~tk~~av~R~SDDF~p~dP~sh~~g~ 483 (777)
T PLN02711 404 VDVIHLLEMLCEEYGGRVELAKAYYKALTASVRKHFNGNGVIASMEHCNDFMFLGTEAISLGRVGDDFWCTDPSGDPNGT 483 (777)
T ss_pred EchhhhHhhhcccCCcHHHHHHHHHHHHHHHHHHhCCCCCeEeecccCchhhhccCcccceeeecccccCCCCccccccc
Confidence 999999999998899999999999999999999999999999999999998885 5788999999999999999998
Q ss_pred -----hHHHHhhhhhhhccCCCCCCCccccCCChhHHHHHHHHHhcCCcEEeecCCCCCcHHHHhhhcCCCCceeecCCC
Q 003500 502 -----IHISSVAYNTLFLGEFMQPDWDMFHSLHPAAEYHGAARAVGGCAIYVSDKPGNHNFDLLRKLVLPDGSVLRAQLP 576 (815)
Q Consensus 502 -----~Hi~~na~nsl~~g~~~~PDwDMf~s~h~~a~~HaaaraisGgPvyiSD~pg~hd~~lL~~Lv~pdG~ilR~~~p 576 (815)
.||++|||||||||+++|||||||||.||+|+|||++||||||||||||+||+|||+||||||+|||+||||++|
T Consensus 484 ~W~~~~Hi~~~AyNSLllg~~v~PDWDMF~S~Hp~A~~HAaaRAisGGPIYVSD~pG~Hdf~LLk~LvlpdGsIlR~~~p 563 (777)
T PLN02711 484 FWLQGCHMVHCAYNSLWMGNFIHPDWDMFQSTHPCAEFHAASRAISGGPIYVSDSVGKHNFPLLKRLVLPDGSILRCQYY 563 (777)
T ss_pred cccccceeeeehhhhhhhcccccCCchhhhccCchHHHHHHHHhhcCCCEEEecCCCCccHHHHHhhhCCCCcEecccCC
Confidence 499999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCcCCCCcceEEEEeecCCcceEEEEeecCCccccccccccccCCCCcceeeeeecccchhhhhhhCCC--
Q 003500 577 GRPTRDCLFADPARDGTSLLKVWNVNKCSGVVGVFNCQGAGWCKITKKTRIHDESPGTLTASVRVTDVENMAQIAGAG-- 654 (815)
Q Consensus 577 g~pt~d~lf~dp~~d~~~lLkiwn~~~~~gvlg~FN~~ga~w~~~~~~~~~~~~~~~~~s~~v~~~D~~~~~~~~~~~-- 654 (815)
|+|||||||.||++|++++|||||+|+++||||+|||||++||+++++|++|+++++++|+.|+++||++..+.++..
T Consensus 564 g~PtrDcLF~DP~~dg~slLKIwn~nk~tGviG~FNcqgagW~~~~~~~~~~~~~~~~vt~~v~~~Dv~w~~~~~~~~~~ 643 (777)
T PLN02711 564 ALPTRDCLFEDPLHDGKTMLKIWNLNKFTGVIGAFNCQGGGWCRETRRNKCASQFSHTVTAKASPKDIEWNSGKSPISIE 643 (777)
T ss_pred CCccchhhccccccCCceEEEEEeecCCcceEEEEEecCCcccchhhhcccccCCCCceEEEEchHHhcccCCCCCcCcc
Confidence 999999999999999999999999999999999999999999999999999999999999999999998764433222
Q ss_pred CCCcEEEEEeccceEEecCCCCeEeEEecCCcEEEEEEeeeeeecC-ceeEEEehhhhhhcCCCceeEEEEEeccCCCCC
Q 003500 655 WNGDAIVYAHRSGEVVRLPKGASVPVTLKVLEYELFHFCPLKEISS-NISFAAIGLLDMFNSGGAVENVEVHMSEKKPDL 733 (815)
Q Consensus 655 ~~~~~vvy~~~sg~l~~l~~~~~~~v~L~~~~~ei~t~~Pv~~~~~-~~~~A~iGL~~k~~~~~AV~~~~~~~~~~~~~~ 733 (815)
-.+.|+||+|++|++.++++++.++|+|++++|||||+|||+.+.+ +++||||||+||||++|||+++++..
T Consensus 644 ~~~~y~vy~~~s~~l~~l~~~~~l~vtL~~~~~Eiftv~Pv~~~~~~~~~fApIGL~~m~nsggAv~~~~~~~------- 716 (777)
T PLN02711 644 GVQVFAVYLFQSKKLVLSKPSENLEISLEPFNFELITVSPVTTLPGKSIQFAPIGLVNMLNTGGAIQSLAYDD------- 716 (777)
T ss_pred CceeEEEEEecCCeEEECCCCCceEEEecCcceEEEEEeeeEEecCCCceEEecchhhhccCceeEEEEEecc-------
Confidence 2578999999999999999999999999999999999999999976 49999999999999999999998863
Q ss_pred CCCCcccccccccCCCCCCceEEEEEEEeeceeEEEEcCCCceeEECCeEeeEEEeCCceeEEEEccCCccCcceeeeEE
Q 003500 734 FDGEVSSELTTSLSDNRSPTATISLKVRGCGRFGIYSSQRPLKCTVGSIQTDFTYDSATGLMTMTLPVPEEEMYRWPVEI 813 (815)
Q Consensus 734 ~~~g~~~~~~~~~~~~~~~~~~v~v~vkg~G~fg~YsS~~P~~c~vdg~~~~f~y~~~~gl~t~~l~~~~~~~~~~~v~i 813 (815)
+++ +++|+|||||+||+|||++|++|.|||++++|+|++ |||||+||||+++ ++|.|||
T Consensus 717 ----------------~~~--~v~v~vkg~G~lg~YsS~~P~~c~v~~~~~~f~y~~--g~~~~~~~~~~~~-~~~~v~~ 775 (777)
T PLN02711 717 ----------------AES--SVQIGVKGSGEMRVFASEKPRSCKIDGEEVEFGYED--CMVVVQVPWSGSS-GLSLIEY 775 (777)
T ss_pred ----------------CCC--eEEEEEEeeeEEEEEecCCCeEEEECCEEeeeEecC--CEEEEEecCCCcC-CceeEEE
Confidence 122 588999999999999999999999999999999998 9999999999965 9999999
Q ss_pred eC
Q 003500 814 QV 815 (815)
Q Consensus 814 ~~ 815 (815)
+|
T Consensus 776 ~~ 777 (777)
T PLN02711 776 LF 777 (777)
T ss_pred eC
Confidence 86
No 6
>PF05691 Raffinose_syn: Raffinose synthase or seed imbibition protein Sip1; InterPro: IPR008811 This family consists of several raffinose synthase proteins, also known as seed imbibition (Sip1) proteins. Raffinose (O-alpha- D-galactopyranosyl- (1-->6)- O-alpha- D-glucopyranosyl-(1-->2)- O-beta- D-fructofuranoside) is a widespread oligosaccharide in plant seeds and other tissues. Raffinose synthase (2.4.1.82 from EC) is the key enzyme that channels sucrose into the raffinose oligosaccharide pathway [].
Probab=100.00 E-value=3.5e-200 Score=1714.96 Aligned_cols=719 Identities=61% Similarity=1.089 Sum_probs=687.6
Q ss_pred eeeeCcEEEEeCeecccCCCCCeEEeecCCC--------ccccceeeecccCCCCcceeeeCCCccCceeEEEeeeccCc
Q 003500 48 ISISDGNLVVHGKTILTGVPDNIILTPGNGV--------GLVAGAFIGATASHSKSLHVFPMGVLEDLRFMCCFRFKLWW 119 (815)
Q Consensus 48 ~~~~~g~l~~~~~~~l~~~~~~~~~~~~~~~--------~~~~g~~~~~~~~~~~~~~~~~lG~~~~~r~~~l~r~k~~W 119 (815)
|+++||+|+|+|+++|++||+||+++|.++. ..+.|+|+|+++.+++|||+++||++++.|||||||||+||
T Consensus 1 ~~~~~~~l~v~g~~~l~~vp~nv~~~~~~~~~~~~~~~~~~~~g~f~g~~~~~~~sr~v~~lG~l~~~rfm~~fRfK~WW 80 (747)
T PF05691_consen 1 ISLSDGNLVVNGRPILTGVPDNVTLTPASGSDAPPPVFAGAVDGAFLGFTADEPSSRHVFSLGKLRGRRFMSLFRFKLWW 80 (747)
T ss_pred CEecCCeeEECCEEeecCCCcceEeccCccccccccccccCCCceEEcccCCCCCcceeEecccccCceeeehhhhhhhc
Confidence 5799999999999999999999999998865 56789999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCcccEEEEEecCCCCCCCCCCCCeEEEEEEEeecCceEEEeecCCCCeEEEEEecCCcceeccccceE
Q 003500 120 MTQRMGTCGKDVPLETQFMLVESKDNSESDQDDGPTIYTVFLPLLEGQFRSALQGNENNEIEICLESGDNAVETNQGLYL 199 (815)
Q Consensus 120 ~~pr~g~~~~~ip~etq~ll~e~~~~~~l~~~~~~~~y~v~Lp~~~g~~ra~L~~~~~~~~~i~~~sg~~~~~~~~~~~~ 199 (815)
|+||+|++++|||.||||||+|.+++++ +...|+|+|||++|+|||+||++++++++||+|||++.+.++++..+
T Consensus 81 m~p~~G~~g~dip~eTQ~ll~e~~~~~~-----~~~~Y~vlLPl~eg~FRa~Lqg~~~~~l~i~veSg~~~v~~s~~~~~ 155 (747)
T PF05691_consen 81 MTPRMGTSGRDIPMETQFLLLESPDDSD-----EGAPYVVLLPLLEGSFRASLQGGEDDELEICVESGDPAVQTSSFDHA 155 (747)
T ss_pred cccccCCCcccCChhhheeeeecCcccC-----CccceEEEEEEecCceeeeeccCCCCcEEEEEecCCCccccccCceE
Confidence 9999999999999999999999995331 23489999999999999999999999999999999999999999999
Q ss_pred EEEEeCCChHHHHHHHHHHHHHHhhcccccccccCCCcccccccccccccccccCHHHHHHHHHHHHhCCCCCcEEEEec
Q 003500 200 VYTHAGPNPFEVISQAVKAVEKYMQTFTHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDD 279 (815)
Q Consensus 200 v~v~~g~dp~~~i~~A~~~v~~~l~tf~~~~~K~~P~~~d~lGWCTWdaf~~~vte~~I~~~l~~L~~~Gi~~~~vIIDD 279 (815)
|||++|+|||++|++|++++++|++||++|++|++|.++|+||||||||||++||+++|++++++|+++|+|++||||||
T Consensus 156 l~v~~g~dPy~~i~~A~~~~~~~l~tf~~r~~K~~P~~~d~lGwCTWdaf~~~v~~~~i~~~l~~L~~~gi~~~~viIDD 235 (747)
T PF05691_consen 156 LYVHAGDDPYELIREAVKAVRKHLGTFRLREEKKYPEFLDGLGWCTWDAFYQDVTEEGILEGLKSLEEGGIPPRFVIIDD 235 (747)
T ss_pred EEEeccCCHHHHHHHHHHHHHhcccccccccccchhhhhhhhccccHHHhccccCHHHHHHHHHHHHhCCCCceEEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcccCCCC---cccchhhccccccccccCCCccCCccccccc---CCcCCCChHHHHHHHHhcC-CCcEEEEEeeccc
Q 003500 280 GWQQIENKPK---EESNCIVQEGAQFASRLTGIKENSKFQKKCQ---NSEQVSGLKHVVDESKQNH-NVKYVYVWHALAG 352 (815)
Q Consensus 280 GWQ~~~~~~~---~~~~~~~~~~~~~~~~L~~~~~n~KFp~~~~---~~~~p~GLk~lv~~Ik~~~-Glk~vgvWHal~G 352 (815)
|||+++++.. ++.++...+|.||.+||.+|++|.||.+... ++.+|.|||++|++||++| |||||||||||+|
T Consensus 236 GWQ~~~~~~~~~~~~~~~~~~~g~q~~~rl~~~~en~kF~~~~~~~~~~~~~~GL~~~V~~ik~~~~~Ik~V~VWHAL~G 315 (747)
T PF05691_consen 236 GWQSVDNDGDDPSKDGMNLVQEGAQFPRRLTDFKENSKFRAYKSGKSPEAFPSGLKHFVSDIKEKFPGIKYVYVWHALCG 315 (747)
T ss_pred chhcccccCcccccccccccccccccchhhhhhhhhhhhhhccCCCcccCCcccHHHHHHHHHhhCCCCCEEEEeehhcc
Confidence 9999988754 2446778899999999999999999995432 4679999999999999999 8999999999999
Q ss_pred ccCCcCCCCcccccccccccccCCCCCCCCCCCcceeccccccccCccCHHHHHHHHHHHHHHHHhcCCCEEEEccccch
Q 003500 353 YWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHGLGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNII 432 (815)
Q Consensus 353 YWgGI~P~s~~~~~y~~~~~~p~~spG~~~~~pd~a~d~~~~~glglv~p~~a~~fYd~l~~~Las~GVD~VKvD~q~~l 432 (815)
|||||+|++ +.+|+.++++|..+||...++||++++++..+|+++++|+++++|||+||+||+++||||||||+|+.+
T Consensus 316 YWgGi~P~~--~~~~~~k~~~~~~spg~~~~~~d~~~d~~~~~g~glv~p~~~~~FYd~~hsyL~s~GVDgVKVD~Q~~l 393 (747)
T PF05691_consen 316 YWGGISPDG--MLAYNYKLVYPKLSPGLQGNMPDLAVDSIVKGGLGLVDPEDAFRFYDDFHSYLASAGVDGVKVDVQAIL 393 (747)
T ss_pred eecCcCCCC--ccccccceeecccCCcccccCccccccccccCcccccCHHHHHHHHHHHHHHHHHcCCCEEEEchhhhh
Confidence 999999975 457899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccCCCCCchhHHHHHHHHHHHHHHhcCCCCcEEeeccCCCCCccc-ccccCeEEccCccCCCCccc--------hhhH
Q 003500 433 ETLGAGHGGRVSLTRSYHQALEASIARNFPDNGCISCMCHNTDGIYS-SKQTAVIRASDDYYPRDPAS--------HTIH 503 (815)
Q Consensus 433 ~~l~~~~~grv~l~~ay~~AL~~s~~~~f~g~~iI~cMs~~~~~l~~-~~~~~~~R~SdDf~p~~p~~--------~~~H 503 (815)
++++.++++|++++++||+||++|++|||+++++|+||||+++++|+ .+.++++|+||||||++|++ |++|
T Consensus 394 ~~l~~~~ggrv~la~ay~~AL~~S~~r~F~~~~vI~CMsh~~~~l~~~~~~~av~R~SDDF~P~~p~s~p~g~~w~h~~H 473 (747)
T PF05691_consen 394 ETLGEGYGGRVELARAYQDALEASVARHFSGNGVINCMSHNPDNLYHSTKQSAVVRNSDDFFPRDPASDPNGVFWLHTWH 473 (747)
T ss_pred hhhhccCCcHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCccchhcccccccceeccccccCCCCCCCccccchhhHHH
Confidence 99999999999999999999999999999999999999999999999 78889999999999999999 9999
Q ss_pred HHHhhhhhhhccCCCCCCCccccCCChhHHHHHHHHHhcCCcEEeecCCCCCcHHHHhhhcCCCCceeecCCCCCCCccc
Q 003500 504 ISSVAYNTLFLGEFMQPDWDMFHSLHPAAEYHGAARAVGGCAIYVSDKPGNHNFDLLRKLVLPDGSVLRAQLPGRPTRDC 583 (815)
Q Consensus 504 i~~na~nsl~~g~~~~PDwDMf~s~h~~a~~HaaaraisGgPvyiSD~pg~hd~~lL~~Lv~pdG~ilR~~~pg~pt~d~ 583 (815)
|++||||+||+|+++|||||||||.||+|+|||++||||||||||||+||+||++|||+||+|||+||||++||+|||||
T Consensus 474 i~~nAyNsL~~g~~~~PDwDMF~S~h~~A~~HAaaRaiSGGPVYiSD~pG~hd~~LLk~LvlpDG~ilR~~~pg~Pt~d~ 553 (747)
T PF05691_consen 474 IAHNAYNSLLLGQFVWPDWDMFQSSHPAAEFHAAARAISGGPVYISDKPGKHDFDLLKKLVLPDGSILRADHPGRPTRDC 553 (747)
T ss_pred HHHHHHHHHHHHhhcCCCcccccccCccHHHHHHHHhhcCCCEEEeeCCCCCCHHHHHHhhCCCCceeccccCCCCChhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCcCCCCcceEEEEeecCCcceEEEEeecCCccccccccccccCCCCcceeeeeecccchhhhhhhC--CCCCCcEEE
Q 003500 584 LFADPARDGTSLLKVWNVNKCSGVVGVFNCQGAGWCKITKKTRIHDESPGTLTASVRVTDVENMAQIAG--AGWNGDAIV 661 (815)
Q Consensus 584 lf~dp~~d~~~lLkiwn~~~~~gvlg~FN~~ga~w~~~~~~~~~~~~~~~~~s~~v~~~D~~~~~~~~~--~~~~~~~vv 661 (815)
||.||++|++++|||||+|+++||||+|||||++||++++++++|+++++++|+.|+++||+++.++++ .+|+++|+|
T Consensus 554 Lf~dp~~d~~~lLKi~n~n~~~gvig~FN~qgagw~~~~~~~~~~~~~~~~~t~~v~~~Dv~~~~~~~~~~~~~~~~~av 633 (747)
T PF05691_consen 554 LFEDPLRDGKSLLKIWNLNKFTGVIGVFNCQGAGWCREERKNKSHDECPGTLTGSVRPSDVEWISEVAGADDGWNGDFAV 633 (747)
T ss_pred hcccCCCCCceeEEEEecCCccceEEEEecCCCcccchhhhccccCCCCcceEeeccccccceeccccccCcCCCccEEE
Confidence 999999999999999999999999999999999999999999999999999999999999999998887 569999999
Q ss_pred EEeccceEEecC-CCCeEeEEecCCcEEEEEEeeeeeecC-ceeEEEehhhhhhcCCCceeEEEEEeccCCCCCCCCCcc
Q 003500 662 YAHRSGEVVRLP-KGASVPVTLKVLEYELFHFCPLKEISS-NISFAAIGLLDMFNSGGAVENVEVHMSEKKPDLFDGEVS 739 (815)
Q Consensus 662 y~~~sg~l~~l~-~~~~~~v~L~~~~~ei~t~~Pv~~~~~-~~~~A~iGL~~k~~~~~AV~~~~~~~~~~~~~~~~~g~~ 739 (815)
|+|+++++.+|+ ++++++|+|++++|||||++||+.+.+ +++||||||+||||+||||+++++..
T Consensus 634 Y~~~~~~l~~l~~k~~~~~vtL~~~~~El~tv~Pv~~~~~~~v~FAPIGL~nMfNsGGAV~~~~~~~------------- 700 (747)
T PF05691_consen 634 YSHRSGELVLLPPKSESLPVTLKPLEFELFTVSPVKVLGGKGVSFAPIGLVNMFNSGGAVQELEYDD------------- 700 (747)
T ss_pred EEcCCCeEEEecCCCCCceEEEcCcceEEEEEeeEEEecCCCeeEehhhHHHhhcCCceeEEEEEec-------------
Confidence 999999999999 599999999999999999999999987 89999999999999999999998873
Q ss_pred cccccccCCCCCCceEEEEEEEeeceeEEEEcCCCceeEECCeEeeEEEeCCceeEEEEc
Q 003500 740 SELTTSLSDNRSPTATISLKVRGCGRFGIYSSQRPLKCTVGSIQTDFTYDSATGLMTMTL 799 (815)
Q Consensus 740 ~~~~~~~~~~~~~~~~v~v~vkg~G~fg~YsS~~P~~c~vdg~~~~f~y~~~~gl~t~~l 799 (815)
....|+|+|||||+||+|||++|++|.|||+||+|+||++ |||||++
T Consensus 701 ------------~~~~v~i~vrG~G~f~aYsS~~P~~c~vdg~ev~F~yd~~-gllt~~v 747 (747)
T PF05691_consen 701 ------------DEASVKIKVRGCGRFGAYSSARPKKCRVDGAEVEFSYDED-GLLTVDV 747 (747)
T ss_pred ------------CccEEEEEEEeccceeEEEecCceEEEECCEEeeEEEcCC-ceEEEeC
Confidence 2457999999999999999999999999999999999998 9999985
No 7
>PLN02229 alpha-galactosidase
Probab=100.00 E-value=1e-38 Score=354.88 Aligned_cols=337 Identities=19% Similarity=0.221 Sum_probs=226.1
Q ss_pred cccccccccccccccCHHHHHHHHHHHHhCCCC---CcEEEEecccCcccCCCCcccchhhccccccccccCCCccC-Cc
Q 003500 239 DWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTP---PKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIKEN-SK 314 (815)
Q Consensus 239 d~lGWCTWdaf~~~vte~~I~~~l~~L~~~Gi~---~~~vIIDDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~n-~K 314 (815)
.+|||||||+|+++|||+.|++.++.|.+.|+. ++||+||||||...++. .+++.+| .|
T Consensus 63 PpmGWnSWn~~~~~i~E~~i~~~ad~~v~~Gl~~~Gy~yv~iDDgW~~~~rd~-----------------~G~l~~d~~r 125 (427)
T PLN02229 63 PQMGWNSWNFFACNINETVIKETADALVSTGLADLGYIHVNIDDCWSNLKRDS-----------------KGQLVPDPKT 125 (427)
T ss_pred CCceEEchhhhCcccCHHHHHHHHHHHHHhHHHhCCCEEEEEcCCcCCCCcCC-----------------CCCEEEChhh
Confidence 469999999999999999999999997555555 45999999999876553 2456666 57
Q ss_pred ccccccCCcCCCChHHHHHHHHhcCCCcEEEEEeecccccCCcCCCCcccccccccccccCCCCCCCCCCCcceeccccc
Q 003500 315 FQKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAV 394 (815)
Q Consensus 315 Fp~~~~~~~~p~GLk~lv~~Ik~~~Glk~vgvWHal~GYWgGI~P~s~~~~~y~~~~~~p~~spG~~~~~pd~a~d~~~~ 394 (815)
|| +|||+++++||+ .||| +|+|... |+ .+|. ..||+.+++
T Consensus 126 FP---------~G~k~ladyiH~-~GlK-fGIy~d~-----G~----------~TC~----~~pGS~g~e---------- 165 (427)
T PLN02229 126 FP---------SGIKLLADYVHS-KGLK-LGIYSDA-----GV----------FTCQ----VRPGSLFHE---------- 165 (427)
T ss_pred cC---------CcHHHHHHHHHH-CCCc-eEEeccC-----CC----------cccC----CCCCCccHH----------
Confidence 77 899999999999 6999 7886431 22 1221 124543322
Q ss_pred cccCccCHHHHHHHHHHHHHHHHhcCCCEEEEccccchhhccCCCCCchhHHHHHHHHHHHHHHhcCCCCcEEeeccCCC
Q 003500 395 HGLGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASIARNFPDNGCISCMCHNT 474 (815)
Q Consensus 395 ~glglv~p~~a~~fYd~l~~~Las~GVD~VKvD~q~~l~~l~~~~~grv~l~~ay~~AL~~s~~~~f~g~~iI~cMs~~~ 474 (815)
..||+. +|+|||||||+|+|+... . ...+..+++.+||.++ ||+|++|+|+++
T Consensus 166 -------~~DA~~--------fA~WGVDylK~D~C~~~~-----~-~~~~~y~~m~~AL~~t------GRpI~~SlC~WG 218 (427)
T PLN02229 166 -------VDDADI--------FASWGVDYLKYDNCYNLG-----I-KPIERYPPMRDALNAT------GRSIFYSLCEWG 218 (427)
T ss_pred -------HHHHHH--------HHHcCCCEEEecCCCCCC-----c-chhHHHHHHHHHHHhh------CCCcEEEecCCC
Confidence 234554 599999999999997421 1 1122344556666544 899999999976
Q ss_pred CC---cccccccCeEEccCccCCCCccchhhHHHHhhhhhhhccCCCCCCCccccCCC-----hhHHHHHHHHHhcCCcE
Q 003500 475 DG---IYSSKQTAVIRASDDYYPRDPASHTIHISSVAYNTLFLGEFMQPDWDMFHSLH-----PAAEYHGAARAVGGCAI 546 (815)
Q Consensus 475 ~~---l~~~~~~~~~R~SdDf~p~~p~~~~~Hi~~na~nsl~~g~~~~PDwDMf~s~h-----~~a~~HaaaraisGgPv 546 (815)
.. .|..+.+|+||+|+|+++.|....++.. .++..+.+.++++|||+||+..++ .+.+.|+++|||+++||
T Consensus 219 ~~~p~~w~~~~~n~WR~s~DI~d~W~sv~~i~~-~~~~~~~~agPG~wnDpDML~vGn~glT~~E~rthfsLWai~~SPL 297 (427)
T PLN02229 219 VDDPALWAGKVGNSWRTTDDINDTWASMTTIAD-LNNKWAAYAGPGGWNDPDMLEVGNGGMTYEEYRGHFSIWALMKAPL 297 (427)
T ss_pred CCCHHHHHHhhcCeeeccCCcccccccHHHHHH-HHHHHHhhcCCCCCCCCCeeeeCCCCCCHHHHHHHHHHHHHHhCce
Confidence 32 3556789999999999999987654332 334445678999999999999987 58999999999999999
Q ss_pred EeecCCCCCcHHHHhhhc-------CCC--CceeecCCCCCCCccccccCcCCCCcceEEEEeec--CCcceEEEEeecC
Q 003500 547 YVSDKPGNHNFDLLRKLV-------LPD--GSVLRAQLPGRPTRDCLFADPARDGTSLLKVWNVN--KCSGVVGVFNCQG 615 (815)
Q Consensus 547 yiSD~pg~hd~~lL~~Lv-------~pd--G~ilR~~~pg~pt~d~lf~dp~~d~~~lLkiwn~~--~~~gvlg~FN~~g 615 (815)
++|....+-+-+.|+-|+ .+| |. .|++. +.+. .++ -+-||... .+.-+|++||...
T Consensus 298 iiG~DL~~m~~~tl~ILtNkEVIAINQD~lG~------qg~~v----~~~~-~~~--~~~vW~~~L~~g~~aValfN~~~ 364 (427)
T PLN02229 298 LIGCDVRNMTAETMEILSNKEVIAVNQDPLGV------QGRKI----QANG-KNG--CQQVWAGPLSGDRLVVALWNRCS 364 (427)
T ss_pred eecCCcccCCHHHHHHhcCHHHHhhccccccc------CcEEE----EecC-CCC--ceEEEEEECCCCCEEEEEEeCCC
Confidence 999655544444343332 244 32 22221 1111 111 24566543 3455899999653
Q ss_pred CccccccccccccCCCCcceeeeeecccchhhhhhhCCCCCCcEEEEEeccceEEecCCCCeEeEEecCCcEEEEEEeee
Q 003500 616 AGWCKITKKTRIHDESPGTLTASVRVTDVENMAQIAGAGWNGDAIVYAHRSGEVVRLPKGASVPVTLKVLEYELFHFCPL 695 (815)
Q Consensus 616 a~w~~~~~~~~~~~~~~~~~s~~v~~~D~~~~~~~~~~~~~~~~vvy~~~sg~l~~l~~~~~~~v~L~~~~~ei~t~~Pv 695 (815)
. + .+-.+..+|+. +. + ...|-|+.--+++-.-......+.++|.+.+.-+|.+.|+
T Consensus 365 ~---------------~--~~v~v~~~~lG-l~---~---~~~~~VrDLW~~~dlg~~~~~~~~~~v~~Hg~~l~rl~~~ 420 (427)
T PLN02229 365 E---------------P--ATITASWDVIG-LE---S---SISVSVRDLWKHKDLSENVVGSFGAQVDAHDCHMYIFTPQ 420 (427)
T ss_pred C---------------C--EEEEEEHHHcC-CC---C---CCceEEEECCCCCccCccccceEEEEECCCeEEEEEEecc
Confidence 1 1 22223344442 10 0 1236666655554211112567899999999999999997
Q ss_pred ee
Q 003500 696 KE 697 (815)
Q Consensus 696 ~~ 697 (815)
..
T Consensus 421 ~~ 422 (427)
T PLN02229 421 TV 422 (427)
T ss_pred cc
Confidence 74
No 8
>PLN02692 alpha-galactosidase
Probab=100.00 E-value=6.1e-39 Score=355.25 Aligned_cols=340 Identities=17% Similarity=0.206 Sum_probs=228.2
Q ss_pred cccccccccccccccCHHHHHHHHHHHHhCCCC---CcEEEEecccCcccCCCCcccchhhccccccccccCCCccC-Cc
Q 003500 239 DWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTP---PKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIKEN-SK 314 (815)
Q Consensus 239 d~lGWCTWdaf~~~vte~~I~~~l~~L~~~Gi~---~~~vIIDDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~n-~K 314 (815)
.+|||||||+|+++|+|+.|++.++.|.+.|+. ++||+||||||...++.. ++|.++ .|
T Consensus 56 PpmGWnSW~~~~~~i~E~~i~~~ad~~~~~gl~~~Gy~yv~iDDgW~~~~rd~~-----------------G~~~~d~~k 118 (412)
T PLN02692 56 PPMGWNSWNHFSCKIDEKMIKETADALVSTGLSKLGYTYVNIDDCWAEIARDEK-----------------GNLVPKKST 118 (412)
T ss_pred CcceEEchhhhCcccCHHHHHHHHHHHHhccchhcCcEEEEEcCCcCCCCCCCC-----------------CCeeeChhh
Confidence 469999999999999999999999998877776 579999999998776643 345554 67
Q ss_pred ccccccCCcCCCChHHHHHHHHhcCCCcEEEEEeecccccCCcCCCCcccccccccccccCCCCCCCCCCCcceeccccc
Q 003500 315 FQKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAV 394 (815)
Q Consensus 315 Fp~~~~~~~~p~GLk~lv~~Ik~~~Glk~vgvWHal~GYWgGI~P~s~~~~~y~~~~~~p~~spG~~~~~pd~a~d~~~~ 394 (815)
|| +|||+++++||+ .||| +|+|... | ..+|.. ..||
T Consensus 119 FP---------~G~k~ladyiH~-~GLK-fGIy~d~-G--------------~~tC~~---~~pG--------------- 154 (412)
T PLN02692 119 FP---------SGIKALADYVHS-KGLK-LGIYSDA-G--------------YFTCSK---TMPG--------------- 154 (412)
T ss_pred cC---------CcHHHHHHHHHH-CCCc-eEEEecC-C--------------ccccCC---CCCC---------------
Confidence 77 899999999999 6999 7887531 1 112210 0122
Q ss_pred cccCccCHHHHHHHHHHHHHHHHhcCCCEEEEccccchhhccCCCCCchhHHHHHHHHHHHHHHhcCCCCcEEeeccCCC
Q 003500 395 HGLGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASIARNFPDNGCISCMCHNT 474 (815)
Q Consensus 395 ~glglv~p~~a~~fYd~l~~~Las~GVD~VKvD~q~~l~~l~~~~~grv~l~~ay~~AL~~s~~~~f~g~~iI~cMs~~~ 474 (815)
.+.||+...+.+|+|||||||+|+|+.- +.. .....+++.+||.++ ||+|++|+|+++
T Consensus 155 ----------S~g~e~~DA~~fA~WGvDylK~D~C~~~-----~~~-~~~~y~~m~~AL~~t------GRpI~~SlC~wg 212 (412)
T PLN02692 155 ----------SLGHEEQDAKTFASWGIDYLKYDNCNND-----GSK-PTVRYPVMTRALMKA------GRPIFFSLCEWG 212 (412)
T ss_pred ----------chHHHHHHHHHHHhcCCCEEeccccCCC-----Ccc-hhHHHHHHHHHHHHh------CCCeEEEecCCC
Confidence 3457777777889999999999999731 111 112234455555543 899999999987
Q ss_pred CC---cccccccCeEEccCccCCCCccchhhHHHHhhhhhhhccCCCCCCCccccCCC-----hhHHHHHHHHHhcCCcE
Q 003500 475 DG---IYSSKQTAVIRASDDYYPRDPASHTIHISSVAYNTLFLGEFMQPDWDMFHSLH-----PAAEYHGAARAVGGCAI 546 (815)
Q Consensus 475 ~~---l~~~~~~~~~R~SdDf~p~~p~~~~~Hi~~na~nsl~~g~~~~PDwDMf~s~h-----~~a~~HaaaraisGgPv 546 (815)
.. .|..+.+|+||+|+|+++.|....... -.++..+.+++++.|||+||+..++ .+.++|+++|||+++||
T Consensus 213 ~~~p~~w~~~~~n~WR~s~DI~d~W~sv~~~~-~~~~~~~~~agPG~wnDpDML~VGn~glT~~E~rThfsLWai~~SPL 291 (412)
T PLN02692 213 DMHPALWGSKVGNSWRTTNDISDTWDSMISRA-DMNEVYAELARPGGWNDPDMLEVGNGGMTKDEYIVHFSIWAISKAPL 291 (412)
T ss_pred cCChhhhhhhcCCccccccccccchHhHHHHH-HHHHHHhhccCCCCCCCCCeEeECCCCCCHHHHHHHHHHHHHHhCcc
Confidence 42 355678999999999999998755543 3345556688999999999999987 47999999999999999
Q ss_pred EeecCCCCCcHHHHhhhcCCCCceeecCCC--CCCCccccccCcCCCCcceEEEEee--cCCcceEEEEeecCCcccccc
Q 003500 547 YVSDKPGNHNFDLLRKLVLPDGSVLRAQLP--GRPTRDCLFADPARDGTSLLKVWNV--NKCSGVVGVFNCQGAGWCKIT 622 (815)
Q Consensus 547 yiSD~pg~hd~~lL~~Lv~pdG~ilR~~~p--g~pt~d~lf~dp~~d~~~lLkiwn~--~~~~gvlg~FN~~ga~w~~~~ 622 (815)
+||....+-+-+.|.-|+.++ |+...+- |.+-+ .++ .++. +-||.. ..+.-+|++||.....
T Consensus 292 iiG~DL~~~~~~~l~iLtN~e--vIAiNQD~lG~q~~-~v~----~~~~--~~vW~k~l~~g~~aVal~N~~~~~----- 357 (412)
T PLN02692 292 LLGCDVRNMTKETMDIVANKE--VIAVNQDPLGVQAK-KVR----MEGD--LEIWAGPLSGYRVALLLLNRGPWR----- 357 (412)
T ss_pred eecCCcccCCHHHHHHhcCHH--HhhhccCccccCcE-EEE----ecCC--eEEEEEECCCCCEEEEEEECCCCC-----
Confidence 999665555444443333221 2211111 11110 001 1222 455654 3445689999955321
Q ss_pred ccccccCCCCcceeeeeecccchhhhhhhCCCCCCcEEEEEeccceEEecCCCCeEeEEecCCcEEEEEEeee
Q 003500 623 KKTRIHDESPGTLTASVRVTDVENMAQIAGAGWNGDAIVYAHRSGEVVRLPKGASVPVTLKVLEYELFHFCPL 695 (815)
Q Consensus 623 ~~~~~~~~~~~~~s~~v~~~D~~~~~~~~~~~~~~~~vvy~~~sg~l~~l~~~~~~~v~L~~~~~ei~t~~Pv 695 (815)
.+-.+..+|+. + .+ ...|-|+.--+++-.-......++++|++.+.-+|.+.|+
T Consensus 358 ------------~~i~~~~~~lg-l---~~---~~~~~vrDLW~~~~~g~~~~~~~~~~v~~Hg~~l~rl~~~ 411 (412)
T PLN02692 358 ------------NSITANWDDIG-I---PA---NSIVEARDLWEHKTLKQHFVGNLTATVDSHACKMYILKPI 411 (412)
T ss_pred ------------EEEEEeHHHhC-C---CC---CCceEEEECCCCCccCccccceEEEEECCceEEEEEEecC
Confidence 22223334442 1 00 1245566655554221123567899999999999999885
No 9
>PLN02808 alpha-galactosidase
Probab=100.00 E-value=6.4e-38 Score=346.35 Aligned_cols=330 Identities=18% Similarity=0.267 Sum_probs=225.5
Q ss_pred cccccccccccccccCHHHHHHHHHHHHhCCCC---CcEEEEecccCcccCCCCcccchhhccccccccccCCCccC-Cc
Q 003500 239 DWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTP---PKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIKEN-SK 314 (815)
Q Consensus 239 d~lGWCTWdaf~~~vte~~I~~~l~~L~~~Gi~---~~~vIIDDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~n-~K 314 (815)
.+|||||||+|+++|||++|++.++.|++.|+. ++||+||||||...++.. +++.+| .|
T Consensus 32 PpmGWnsW~~~~~~i~e~~i~~~a~~mv~~Gl~~~Gy~yv~iDd~W~~~~rd~~-----------------G~~~~d~~r 94 (386)
T PLN02808 32 PQMGWNSWNHFQCNINETLIKQTADAMVSSGLAALGYKYINLDDCWAELKRDSQ-----------------GNLVPKAST 94 (386)
T ss_pred CcceEEchHHHCCCCCHHHHHHHHHHHHHcchHHhCCEEEEEcCCcCCCCcCCC-----------------CCEeeChhh
Confidence 469999999999999999999999998777777 679999999998766532 345665 67
Q ss_pred ccccccCCcCCCChHHHHHHHHhcCCCcEEEEEeecccccCCcCCCCcccccccccccccCCCCCCCCCCCcceeccccc
Q 003500 315 FQKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAV 394 (815)
Q Consensus 315 Fp~~~~~~~~p~GLk~lv~~Ik~~~Glk~vgvWHal~GYWgGI~P~s~~~~~y~~~~~~p~~spG~~~~~pd~a~d~~~~ 394 (815)
|| +|||+++++||+ .||| +|+|... | ..+|.. ..||
T Consensus 95 FP---------~G~~~lad~iH~-~Glk-fGiy~~~-G--------------~~tC~~---~~pG--------------- 130 (386)
T PLN02808 95 FP---------SGIKALADYVHS-KGLK-LGIYSDA-G--------------TLTCSK---TMPG--------------- 130 (386)
T ss_pred cC---------ccHHHHHHHHHH-CCCc-eEEEecC-C--------------ccccCC---CCCc---------------
Confidence 77 899999999999 6999 7887542 1 122210 0122
Q ss_pred cccCccCHHHHHHHHHHHHHHHHhcCCCEEEEccccchhhccCCCCCchhHHHHHHHHHHHHHHhcCCCCcEEeeccCCC
Q 003500 395 HGLGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASIARNFPDNGCISCMCHNT 474 (815)
Q Consensus 395 ~glglv~p~~a~~fYd~l~~~Las~GVD~VKvD~q~~l~~l~~~~~grv~l~~ay~~AL~~s~~~~f~g~~iI~cMs~~~ 474 (815)
.+.||+...+.+|+|||||||+|+|+.- +. ...+...++.+||.++ ||+|++|+|.++
T Consensus 131 ----------s~~~e~~DA~~fA~WGvDylK~D~C~~~-----~~-~~~~~y~~m~~AL~~t------GRpi~~slc~wg 188 (386)
T PLN02808 131 ----------SLGHEEQDAKTFASWGIDYLKYDNCENT-----GT-SPQERYPKMSKALLNS------GRPIFFSLCEWG 188 (386)
T ss_pred ----------chHHHHHHHHHHHHhCCCEEeecCcCCC-----Cc-cHHHHHHHHHHHHHHh------CCCeEEEecCCC
Confidence 2456666677789999999999999731 11 1122233445555443 899999999976
Q ss_pred C-Cc--ccccccCeEEccCccCCCCccchhhHHHHhhhhhhhccCCCCCCCccccCCC-----hhHHHHHHHHHhcCCcE
Q 003500 475 D-GI--YSSKQTAVIRASDDYYPRDPASHTIHISSVAYNTLFLGEFMQPDWDMFHSLH-----PAAEYHGAARAVGGCAI 546 (815)
Q Consensus 475 ~-~l--~~~~~~~~~R~SdDf~p~~p~~~~~Hi~~na~nsl~~g~~~~PDwDMf~s~h-----~~a~~HaaaraisGgPv 546 (815)
. .. |..+.+|+||+|+|+++.|....+.. -.++..+.+++++.|||+||+..++ .+.++|+++|||+++||
T Consensus 189 ~~~p~~w~~~~~n~WR~s~Di~d~W~~v~~~~-~~~~~~~~~agPG~wnDpDML~vGn~glt~~E~rthfsLWam~~SPL 267 (386)
T PLN02808 189 QEDPATWAGDIGNSWRTTGDIQDNWDSMTSRA-DQNDRWASYARPGGWNDPDMLEVGNGGMTTEEYRSHFSIWALAKAPL 267 (386)
T ss_pred CCCHHHHHHhhcCcccccCCcccchhhHHHHH-HhhhhhHhhcCCCCCCCCCeeeECCCCCCHHHHHHHHHHHHHHhCcc
Confidence 2 22 45577999999999999998755533 3344445678999999999999886 57999999999999999
Q ss_pred EeecCCCCCc---HHHHh-h-h--cCCC--CceeecCCCCCCCccccccCcCCCCcceEEEEee--cCCcceEEEEeecC
Q 003500 547 YVSDKPGNHN---FDLLR-K-L--VLPD--GSVLRAQLPGRPTRDCLFADPARDGTSLLKVWNV--NKCSGVVGVFNCQG 615 (815)
Q Consensus 547 yiSD~pg~hd---~~lL~-~-L--v~pd--G~ilR~~~pg~pt~d~lf~dp~~d~~~lLkiwn~--~~~~gvlg~FN~~g 615 (815)
+||+...+-+ .+||+ + + +.+| |. +|++. + .++. +-||.. ..+.-.|++||...
T Consensus 268 iiG~DL~~~~~~~l~iLtNkevIAINQD~lG~------~~~~v----~----~~~~--~~vW~k~L~~g~~aVal~N~~~ 331 (386)
T PLN02808 268 LIGCDIRSMDNETFELLSNKEVIAVNQDKLGV------QGKKV----K----KDGD--LEVWAGPLSKKRVAVVLWNRGS 331 (386)
T ss_pred eecCCcCcCCHHHHHHhcCHHHHhhcCCcccc------CcEEE----E----ecCC--eEEEEEECCCCCEEEEEEECCC
Confidence 9996655444 55554 2 2 2345 32 22222 1 1222 445554 45567899999654
Q ss_pred CccccccccccccCCCCcceeeeeecccchhhhhhhCCCCCCcEEEEEeccceE-EecCCCCeEeEEecCCcEEEEEEee
Q 003500 616 AGWCKITKKTRIHDESPGTLTASVRVTDVENMAQIAGAGWNGDAIVYAHRSGEV-VRLPKGASVPVTLKVLEYELFHFCP 694 (815)
Q Consensus 616 a~w~~~~~~~~~~~~~~~~~s~~v~~~D~~~~~~~~~~~~~~~~vvy~~~sg~l-~~l~~~~~~~v~L~~~~~ei~t~~P 694 (815)
. +.+++ +..+|+. +. + .+.|-|+.--+++- ... ...++++|++.+.-+|.+.|
T Consensus 332 ~---------------~~~~~--~~~~~lg-l~---~---~~~~~vrDlWs~~~~g~~--~~~~~~~v~pHg~~~~rlt~ 385 (386)
T PLN02808 332 S---------------RATIT--ARWSDIG-LN---S---SAVVNARDLWAHSTQSSV--KGQLSALVESHACKMYVLTP 385 (386)
T ss_pred C---------------CEEEE--EEHHHhC-CC---C---CCceEEEECCCCCccCcc--cceEEEEECCceEEEEEEeC
Confidence 2 11233 3344442 10 0 13466666555542 222 35688999999999998876
No 10
>PLN03231 putative alpha-galactosidase; Provisional
Probab=100.00 E-value=5e-36 Score=328.03 Aligned_cols=296 Identities=15% Similarity=0.153 Sum_probs=191.5
Q ss_pred ccccccccccccccCHHHHHHHHHHHHhCCCC---CcEEEEecccCcccCCCCcccchhhccccccccccCCCccC-Ccc
Q 003500 240 WFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTP---PKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIKEN-SKF 315 (815)
Q Consensus 240 ~lGWCTWdaf~~~vte~~I~~~l~~L~~~Gi~---~~~vIIDDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~n-~KF 315 (815)
+|||||||+|+++|||+.|+++++ +.+.|+. ++||+|||||+...+....+ ......+.......+++.++ .||
T Consensus 2 pMGWNSWn~f~~~i~E~~i~~~Ad-~v~~gL~~~GY~Yv~iDd~W~~~~~~g~~~-~~~~~~~~~~~d~~G~l~pd~~rF 79 (357)
T PLN03231 2 PRGWNSYDSFSFTISEEQFLENAK-IVSETLKPHGYEYVVIDYLWYRKLKHGWFK-TSAKSPGYDLIDKWGRPLPDPKRW 79 (357)
T ss_pred CCCccchhccCcCcCHHHHHHHHH-HHHcchHHhCCEEEEECCcccccccccccc-cccccccccccCCCCCcccCcccC
Confidence 699999999999999999999999 5555555 46999999999764211000 00000000001123455555 678
Q ss_pred cccccCCcCCCChHHHHHHHHhcCCCcEEEEEeecccccCCcCCCCccccccccccccc-CCCCCCCCCC---Ccceecc
Q 003500 316 QKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGVKPAADGMEHYDTALAYP-VTSPGVMGNQ---PDIVMDS 391 (815)
Q Consensus 316 p~~~~~~~~p~GLk~lv~~Ik~~~Glk~vgvWHal~GYWgGI~P~s~~~~~y~~~~~~p-~~spG~~~~~---pd~a~d~ 391 (815)
|+. +...|||+|+++||+ .||| +|| |... |+..-+ . +.. +| ..+||+.+++ .|++...
T Consensus 80 Ps~----~~~~G~k~lADyvHs-~GLK-fGI-Y~~~----G~~tca-~----~~~--~pi~G~~Gs~g~~~~a~Dia~~~ 141 (357)
T PLN03231 80 PST----TGGKGFAPIAAKVHA-LGLK-LGI-HVMR----GISTTA-V----KKK--TPILGAFKSNGHAWNAKDIALMD 141 (357)
T ss_pred CCC----ccccCcHHHHHHHHh-CCcc-eEE-EecC----Cccchh-c----ccC--CccCCCCcccccccchhhhcccc
Confidence 842 223499999999999 6999 788 4443 342221 1 000 11 1345554432 2332211
Q ss_pred cc----ccc-cCc-cCHHHHHHHHHHHHHHHHhcCCCEEEEccccchhhccCCCCCchhHHHHHHHHHHHHHHhcCCCCc
Q 003500 392 LA----VHG-LGL-VHPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASIARNFPDNG 465 (815)
Q Consensus 392 ~~----~~g-lgl-v~p~~a~~fYd~l~~~Las~GVD~VKvD~q~~l~~l~~~~~grv~l~~ay~~AL~~s~~~~f~g~~ 465 (815)
.. ... +++ ++...+++||+.+.+.+|+|||||||+|+|..- . ....+..+++.+||.++ ||+
T Consensus 142 ~~c~~~~~~~~~v~~~~~gaq~y~~~~a~~fA~WGVDylK~D~c~~~-----~-~~~~~~y~~m~~AL~~t------GRp 209 (357)
T PLN03231 142 QACPWMQQCFVGVNTSSEGGKLFIQSLYDQYASWGIDFIKHDCVFGA-----E-NPQLDEILTVSKAIRNS------GRP 209 (357)
T ss_pred ccccccccccccccccchhHHHHHHHHHHHHHHhCCCEEeecccCCC-----C-cccHHHHHHHHHHHHHh------CCC
Confidence 10 011 233 456789999999999999999999999987521 1 11223344566666654 899
Q ss_pred EEeeccCCCCCc--c---cccccCeEEccCccCCCCccchhhHHHHhhhhh-------hhccCCCCCCCccccCCC----
Q 003500 466 CISCMCHNTDGI--Y---SSKQTAVIRASDDYYPRDPASHTIHISSVAYNT-------LFLGEFMQPDWDMFHSLH---- 529 (815)
Q Consensus 466 iI~cMs~~~~~l--~---~~~~~~~~R~SdDf~p~~p~~~~~Hi~~na~ns-------l~~g~~~~PDwDMf~s~h---- 529 (815)
|++|+|++.... + -.+.+|+||+|+|+++.|.....+......+.. -+.|++.|||+||+..++
T Consensus 210 Iv~Slc~g~~~~~~~~~~i~~~an~WR~s~DI~d~W~~v~~~~~~~~~~~~~~~~~~~~~agpG~WnD~DML~vG~~g~~ 289 (357)
T PLN03231 210 MIYSLSPGDGATPGLAARVAQLVNMYRVTGDDWDDWKYLVKHFDVARDFAAAGLIAIPSVVGGKSWVDLDMLPFGRLTDP 289 (357)
T ss_pred eEEEecCCCCCCchhhhhhhhhcCcccccCCcccchhhHHHHHHHHHHHhhhcccccccCCCCCCCCCccchhcCCCCCC
Confidence 999999864332 2 135689999999999999875543322222222 145778999999998883
Q ss_pred --------------hhHHHHHHHHHhcCCcEEeecCCCCCcHHHHhhhcCCC
Q 003500 530 --------------PAAEYHGAARAVGGCAIYVSDKPGNHNFDLLRKLVLPD 567 (815)
Q Consensus 530 --------------~~a~~HaaaraisGgPvyiSD~pg~hd~~lL~~Lv~pd 567 (815)
.+.++|+++|||+.+||++|-...+-+-+.|.-|+.++
T Consensus 290 ~~~~g~~~~~glT~~E~rthfslWam~~SPLiiG~DL~~~~~~tl~iLtN~e 341 (357)
T PLN03231 290 AAAYGPYRNSRLSLEEKKTQMTLWAVAKSPLMFGGDLRRLDNETLSLLTNPT 341 (357)
T ss_pred cccccccccCCCCHHHHHHHHHHHHHHhCchhhcCCcccCCHHHHHHhcChH
Confidence 37899999999999999999666666655555554443
No 11
>PLN02899 alpha-galactosidase
Probab=100.00 E-value=2.6e-34 Score=326.80 Aligned_cols=298 Identities=14% Similarity=0.133 Sum_probs=186.0
Q ss_pred CcccccccccccccccccCHHHHHHHHHHHHhCCCC---CcEEEEecccCcccCCCCcccchhhccccccccccCCCccC
Q 003500 236 SFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTP---PKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIKEN 312 (815)
Q Consensus 236 ~~~d~lGWCTWdaf~~~vte~~I~~~l~~L~~~Gi~---~~~vIIDDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~n 312 (815)
....+|||||||+|+++|||+.|+++++.+ +.|+. ++||+||||||...++.. ... ..|.......+.+.++
T Consensus 28 A~TPPMGWNSWn~f~~~I~E~~i~~~Ad~v-s~GLk~~GY~YVnIDDcW~~~~~~g~-~~~---s~g~~~~D~~GrLvPD 102 (633)
T PLN02899 28 ASFPPRGWNSYDSFSWIVSEEEFLQNAEIV-SQRLLPFGYEYVVVDYLWYRKKVEGA-YVD---SLGFDVIDEWGRPIPD 102 (633)
T ss_pred cCCCCCCCcchhhhccCCCHHHHHHHHHHH-HcchHhhCCeEEEEcccccccccccc-ccc---cccccccCCCCCCccC
Confidence 344579999999999999999999999954 44555 469999999997543211 000 0000001123455665
Q ss_pred -CcccccccCCcCCCChHHHHHHHHhcCCCcEEEEEeecccccCCcCCC-----CcccccccccccccCCCCCCCCCCCc
Q 003500 313 -SKFQKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGVKPA-----ADGMEHYDTALAYPVTSPGVMGNQPD 386 (815)
Q Consensus 313 -~KFp~~~~~~~~p~GLk~lv~~Ik~~~Glk~vgvWHal~GYWgGI~P~-----s~~~~~y~~~~~~p~~spG~~~~~pd 386 (815)
.|||+. +.++|||+++++||+ +||| +|| |.+.| +... .++... ++.-.|+..-++ -+..|
T Consensus 103 p~RFPSs----~~g~GmK~LADYVHs-kGLK-FGI-Y~~~G----i~tcA~~~~~PI~gs-~~g~~y~~s~~~--~~a~D 168 (633)
T PLN02899 103 PGRWPSS----RGGKGFTEVAEKVHA-MGLK-FGI-HVMRG----ISTQAVNANTPILDA-VKGGAYEESGRQ--WRAKD 168 (633)
T ss_pred cccCCCC----ccCCCcHHHHHHHHh-CCcc-eEE-EecCC----CcccccccCCccccc-cccccccccccc--cchhh
Confidence 688842 234699999999999 6999 799 66654 3211 111000 000001000000 11233
Q ss_pred ceeccccc----ccc-Cc-cCHHHHHHHHHHHHHHHHhcCCCEEEEccccchhhccCCCCCchhHHHHHHHHHHHHHHhc
Q 003500 387 IVMDSLAV----HGL-GL-VHPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASIARN 460 (815)
Q Consensus 387 ~a~d~~~~----~gl-gl-v~p~~a~~fYd~l~~~Las~GVD~VKvD~q~~l~~l~~~~~grv~l~~ay~~AL~~s~~~~ 460 (815)
++....+- .|+ ++ .+++.+++||+++++.+|+|||||||+|+|+. + . ...+..+++.+||.++
T Consensus 169 Ia~~~~tC~w~~~g~~~vDa~~~~g~a~~~Sla~tfAsWGVDyLKyD~c~~-~----~--~~~~ey~~ms~AL~aT---- 237 (633)
T PLN02899 169 IALKERACAWMSHGFMSVNTKLGAGKAFLRSLYDQYAEWGVDFVKHDCVFG-D----D--FDLEEITYVSEVLKEL---- 237 (633)
T ss_pred ccccccccccCCCCcccccccccchhhhhHHHHHHHHHhCCCEEEEcCCCC-C----C--CChHHHHHHHHHHHHh----
Confidence 33222111 111 22 23567899999999999999999999998752 1 1 1233356677777655
Q ss_pred CCCCcEEeeccCCCCCcc-----cccccCeEEccCccCCCCccchhhHHHHhhhhh-hhc---c--CCCCCCCccccCCC
Q 003500 461 FPDNGCISCMCHNTDGIY-----SSKQTAVIRASDDYYPRDPASHTIHISSVAYNT-LFL---G--EFMQPDWDMFHSLH 529 (815)
Q Consensus 461 f~g~~iI~cMs~~~~~l~-----~~~~~~~~R~SdDf~p~~p~~~~~Hi~~na~ns-l~~---g--~~~~PDwDMf~s~h 529 (815)
||+|++++|++....+ -.+.+|+||+++|+|+.|............+.. ... + .+.|||+||+..+.
T Consensus 238 --GRPIvySLspG~~~~p~wa~~v~~~aNmWRitgDI~D~W~sV~~~~d~~~~~~~~~~~g~~G~~gg~WNDpDML~VG~ 315 (633)
T PLN02899 238 --DRPIVYSLSPGTSATPTMAKEVSGLVNMYRITGDDWDTWGDVAAHFDVSRDFAAAGLIGAKGLRGRSWPDLDMLPLGW 315 (633)
T ss_pred --CCCeEEEecCCcccchhhhhhhhccCccceecCCcccchHHHHHHHHHHHHHhhccccccCCCCCCCCCCcceecccC
Confidence 8999999998654322 135689999999999999875443222222221 011 1 24899999998771
Q ss_pred ------------------hhHHHHHHHHHhcCCcEEeecCCCCCcHHHHhhhcC
Q 003500 530 ------------------PAAEYHGAARAVGGCAIYVSDKPGNHNFDLLRKLVL 565 (815)
Q Consensus 530 ------------------~~a~~HaaaraisGgPvyiSD~pg~hd~~lL~~Lv~ 565 (815)
.+.+.|+++|||..+||++|-...+-+-+.|.-|+.
T Consensus 316 lg~~~~n~G~~r~~~LT~dE~rThfSLWAm~aSPLiiG~DLr~md~~tl~ILTN 369 (633)
T PLN02899 316 LTDPGSNVGPHRACNLTLDEQKTQMTLWAMAKSPLMYGGDLRKLDQATYSLITN 369 (633)
T ss_pred CCccccccCccccCCCCHHHHHHHHHHHHHHhCchhhcCCcccCCHHHHHHhcC
Confidence 378999999999999999996655555444444433
No 12
>KOG2366 consensus Alpha-D-galactosidase (melibiase) [Carbohydrate transport and metabolism]
Probab=99.94 E-value=5.8e-27 Score=251.74 Aligned_cols=338 Identities=21% Similarity=0.251 Sum_probs=220.8
Q ss_pred cccccccccccccccC----------HHHHHHHHHHHHhCCCC---CcEEEEecccCcccCCCCcccchhhccccccccc
Q 003500 239 DWFGWCTWDAFYTDVT----------AEGVDEGLKSLSAGGTP---PKFLIIDDGWQQIENKPKEESNCIVQEGAQFASR 305 (815)
Q Consensus 239 d~lGWCTWdaf~~~vt----------e~~I~~~l~~L~~~Gi~---~~~vIIDDGWQ~~~~~~~~~~~~~~~~~~~~~~~ 305 (815)
.+|||.+|+.|.++++ |..+.+.++.|++.|.. +.||+|||+|-...++.+ .|
T Consensus 33 P~MGw~sW~~f~cniDCv~~pd~cIsE~l~~~~ad~mvseG~~~vGY~yi~iDDCW~e~~Rd~~--------------gr 98 (414)
T KOG2366|consen 33 PQMGWNSWERFRCNIDCVFGPDFCISEQLFKEMADAMVSEGLADVGYEYINIDDCWSEVTRDSD--------------GR 98 (414)
T ss_pred CCcccccccceeeecccccCCccchhHHHHHHHHHHHHHhHHHhcCcEEEechhhhhhhccCCc--------------cc
Confidence 4699999999999888 99999999999988766 579999999999988754 22
Q ss_pred cCCCccC-CcccccccCCcCCCChHHHHHHHHhcCCCcEEEEEeecccccCCcCCCCcccccccccccccCCCCCCCCCC
Q 003500 306 LTGIKEN-SKFQKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQ 384 (815)
Q Consensus 306 L~~~~~n-~KFp~~~~~~~~p~GLk~lv~~Ik~~~Glk~vgvWHal~GYWgGI~P~s~~~~~y~~~~~~p~~spG~~~~~ 384 (815)
+.++ .+|| +|++++.+++|. .|+|. ||+.+. + + .++.-+ ||++.++
T Consensus 99 ---Lva~~~rFP---------~Gi~~ladyvHs-~GLKl------------GiYsD~-G--~-~TC~g~----PGS~~~e 145 (414)
T KOG2366|consen 99 ---LVADPSRFP---------SGIKALADYVHS-KGLKL------------GIYSDA-G--N-FTCAGY----PGSLGHE 145 (414)
T ss_pred ---cccChhhcc---------cchhhhhhchhh-cCCce------------eeeecc-C--c-hhhccC----Ccccchh
Confidence 3444 5666 899999999999 59993 566763 3 3 344444 4554443
Q ss_pred CcceeccccccccCccCHHHHHHHHHHHHHHHHhcCCCEEEEccccchhhccCCCCCchhHHHHHHHHHHHHHHhcCCCC
Q 003500 385 PDIVMDSLAVHGLGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASIARNFPDN 464 (815)
Q Consensus 385 pd~a~d~~~~~glglv~p~~a~~fYd~l~~~Las~GVD~VKvD~q~~l~~l~~~~~grv~l~~ay~~AL~~s~~~~f~g~ 464 (815)
..+|+.| |+|||||+|.|+|...-. ...+.-..+.+||. + +||
T Consensus 146 -----------------~~DA~tF--------A~WgvDylKlD~C~~~~~------~~~~~Yp~ms~aLN----~--tGr 188 (414)
T KOG2366|consen 146 -----------------ESDAKTF--------ADWGVDYLKLDGCFNNLI------TMPEGYPIMSRALN----N--TGR 188 (414)
T ss_pred -----------------hhhhhhh--------HhhCCcEEeccccccccc------cccccchhHHHHHh----c--cCC
Confidence 2467776 999999999999985211 11122223444443 3 599
Q ss_pred cEEeeccCCCCCc---c-------cccccCeEEccCccCCCCccchhhHHHH---hhhhhhhccCCCCCCCccccCCC--
Q 003500 465 GCISCMCHNTDGI---Y-------SSKQTAVIRASDDYYPRDPASHTIHISS---VAYNTLFLGEFMQPDWDMFHSLH-- 529 (815)
Q Consensus 465 ~iI~cMs~~~~~l---~-------~~~~~~~~R~SdDf~p~~p~~~~~Hi~~---na~nsl~~g~~~~PDwDMf~s~h-- 529 (815)
+|+++.|.++... + -+++.|.||+.||+...|.+.-.+.-+. +-.-+-..|++.|+|+||+.+++
T Consensus 189 pi~ySlC~W~~~~~~~~~~pny~~i~~~~N~WR~~dDI~dtW~Sv~~I~d~~~~nqd~~~~~agPg~WNDpDmL~iGN~G 268 (414)
T KOG2366|consen 189 PIFYSLCSWPAYHPGLPHHPNYKNISTICNSWRTTDDIQDTWKSVDSIIDYICWNQDRIAPLAGPGGWNDPDMLEIGNGG 268 (414)
T ss_pred ceEEEeccCcccccCccCCCcchhhhhhhccccchhhhhhHHHHHHHHHHHHhhhhhhhccccCCCCCCChhHhhcCCCC
Confidence 9999999997432 3 2367899999999999988765544322 22223467889999999999986
Q ss_pred ---hhHHHHHHHHHhcCCcEEeecC---CCCCcHHHHh-hhc---CCC--CceeecCCCCCCCccccccCcCCCCcceEE
Q 003500 530 ---PAAEYHGAARAVGGCAIYVSDK---PGNHNFDLLR-KLV---LPD--GSVLRAQLPGRPTRDCLFADPARDGTSLLK 597 (815)
Q Consensus 530 ---~~a~~HaaaraisGgPvyiSD~---pg~hd~~lL~-~Lv---~pd--G~ilR~~~pg~pt~d~lf~dp~~d~~~lLk 597 (815)
.+...|++.||+..+||.+|.. ......++|. |.+ .+| |..=|+- +.++. .+.
T Consensus 269 ~s~e~y~~qf~lWai~kAPLlms~Dlr~is~~~~~il~nk~~IaiNQDplgiqGr~i--------------~~e~~-~ie 333 (414)
T KOG2366|consen 269 MSYEEYKGQFALWAILKAPLLMSNDLRLISKQTKEILQNKEVIAINQDPLGIQGRKI--------------VLEGD-SIE 333 (414)
T ss_pred ccHHHHHHHHHHHHHhhchhhhccchhhcCHHHHHHhcChhheeccCCccchhheee--------------eecCC-ceE
Confidence 6789999999999999999954 3344455554 322 233 2111110 00222 266
Q ss_pred EEeecC--CcceEEEEeecCCccccccccccccCCCCcceeeeeecccchhhhhhhCCCCCCcEEEEEeccceEEecCCC
Q 003500 598 VWNVNK--CSGVVGVFNCQGAGWCKITKKTRIHDESPGTLTASVRVTDVENMAQIAGAGWNGDAIVYAHRSGEVVRLPKG 675 (815)
Q Consensus 598 iwn~~~--~~gvlg~FN~~ga~w~~~~~~~~~~~~~~~~~s~~v~~~D~~~~~~~~~~~~~~~~vvy~~~sg~l~~l~~~ 675 (815)
||...- ..-+++.+|.+..+ .|..++ .+...+.... ....|.+..--++.+..++..
T Consensus 334 vw~~pls~~~~Ava~lNr~~~~-------------~~~~It-~~~l~~~g~~-------~~~~~~~~dLw~~~~~~~~~~ 392 (414)
T KOG2366|consen 334 VWSGPLSGKSVAVAFLNRRKTG-------------IPARIT-AASLRELGLT-------NPASYTAHDLWSGVLGFLPTK 392 (414)
T ss_pred EEeeccCCceEEEEEecccCCC-------------CCcccc-HHHHhhcCCC-------CCceeEeeehhhccccccccC
Confidence 776532 23344555543211 122233 1111111100 122344444345555566678
Q ss_pred CeEeEEecCCcEEEEEEeeee
Q 003500 676 ASVPVTLKVLEYELFHFCPLK 696 (815)
Q Consensus 676 ~~~~v~L~~~~~ei~t~~Pv~ 696 (815)
+++.+.++|.+.-+|.+.|..
T Consensus 393 ~~i~~~V~phG~~l~~l~~~~ 413 (414)
T KOG2366|consen 393 DSISAQVNPHGVVLFVLHPSN 413 (414)
T ss_pred CeEEEEECCCCcEEEEEEecc
Confidence 999999999999999888764
No 13
>PF02065 Melibiase: Melibiase; InterPro: IPR000111 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycosyl hydrolase family 27, family 31 and family 36 alpha-galactosidases form the glycosyl hydrolase clan GH-D (acc_GH from CAZY), a superfamily of alpha-galactosidases, alpha-N-acetylgalactosaminidases, and isomaltodextranases which are likely to share a common catalytic mechanism and structural topology. Alpha-galactosidase (3.2.1.22 from EC) (melibiase) [] catalyzes the hydrolysis of melibiose into galactose and glucose. In man, the deficiency of this enzyme is the cause of Fabry's disease (X-linked sphingolipidosis). Alpha-galactosidase is present in a variety of organisms. There is a considerable degree of similarity in the sequence of alpha-galactosidase from various eukaryotic species. Escherichia coli alpha-galactosidase (gene melA), which requires NAD and magnesium as cofactors, is not structurally related to the eukaryotic enzymes; by contrast, an Escherichia coli plasmid encoded alpha-galactosidase (gene rafA P16551 from SWISSPROT) [] contains a region of about 50 amino acids which is similar to a domain of the eukaryotic alpha-galactosidases. Alpha-N-acetylgalactosaminidase (3.2.1.49 from EC) [] catalyzes the hydrolysis of terminal non-reducing N-acetyl-D-galactosamine residues in N-acetyl-alpha-D- galactosaminides. In man, the deficiency of this enzyme is the cause of Schindler and Kanzaki diseases. The sequence of this enzyme is highly related to that of the eukaryotic alpha-galactosidases.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1KTC_A 1KTB_A 1UAS_A 3H55_A 3H53_A 3IGU_B 3H54_A 3LRM_A 3LRL_A 3LRK_A ....
Probab=99.93 E-value=2.7e-25 Score=248.34 Aligned_cols=240 Identities=22% Similarity=0.286 Sum_probs=159.6
Q ss_pred ceEEEEEeCCChHHHHHHHH-HHHHHHhhcccccccccCCCcccccccccccccccccCHHHHHHHHHHHHhCCCCCcEE
Q 003500 197 LYLVYTHAGPNPFEVISQAV-KAVEKYMQTFTHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFL 275 (815)
Q Consensus 197 ~~~v~v~~g~dp~~~i~~A~-~~v~~~l~tf~~~~~K~~P~~~d~lGWCTWdaf~~~vte~~I~~~l~~L~~~Gi~~~~v 275 (815)
++.+++..+.+.++.|++.+ +.+|+++..-.. ..+++ ++|||||+++|+++||+.|++.++.+++.|++ ++
T Consensus 4 tP~~~~~~s~~gl~~~s~~~h~~~r~~~~~~~~-~~~~~-----pv~~nsW~~~~~d~~e~~i~~~a~~~~~~G~e--~f 75 (394)
T PF02065_consen 4 TPEAVASYSDQGLNGMSQRFHRFVRRHLLRPPW-RDKPP-----PVGWNSWEAYYFDITEEKILELADAAAELGYE--YF 75 (394)
T ss_dssp ---EEEEEESBHHHHHHHHHHHHHHHHTSTTTT-TTSS-------EEEESHHHHTTG--HHHHHHHHHHHHHHT-S--EE
T ss_pred CCeEEEEEecCCHHHHHHHHHHHHHHhcCCCcc-CCCCC-----ceEEEcccccCcCCCHHHHHHHHHHHHHhCCE--EE
Confidence 45678888888999999999 567877644221 22333 47899999999999999999999999999987 99
Q ss_pred EEecccCcccCCCCcccchhhccccccccccCCCccC-CcccccccCCcCCCChHHHHHHHHhcCCCcEEEEEeeccccc
Q 003500 276 IIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIKEN-SKFQKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYW 354 (815)
Q Consensus 276 IIDDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~n-~KFp~~~~~~~~p~GLk~lv~~Ik~~~Glk~vgvWHal~GYW 354 (815)
+||||||..+++.. ..+++|.++ .||| +||++++++||+ +|+| +|+|.++.
T Consensus 76 viDDGW~~~r~~d~--------------~~~GdW~~~~~kFP---------~Gl~~l~~~i~~-~Gmk-~GlW~ePe--- 127 (394)
T PF02065_consen 76 VIDDGWFGGRDDDN--------------AGLGDWEPDPKKFP---------NGLKPLADYIHS-LGMK-FGLWFEPE--- 127 (394)
T ss_dssp EE-SSSBCTESTTT--------------STTSBECBBTTTST---------THHHHHHHHHHH-TT-E-EEEEEETT---
T ss_pred EEcCccccccCCCc--------------ccCCceeEChhhhC---------CcHHHHHHHHHH-CCCe-EEEEeccc---
Confidence 99999998866532 357888876 6888 799999999999 7999 89999984
Q ss_pred CCcCCCCcccccccccccccCCCCCCCCCCCcceeccc------ccc--ccCccCHHHHHHHHHHHHHHHHhcCCCEEEE
Q 003500 355 GGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSL------AVH--GLGLVHPKKVFNFYNELHAYLASCGVDGVKV 426 (815)
Q Consensus 355 gGI~P~s~~~~~y~~~~~~p~~spG~~~~~pd~a~d~~------~~~--glglv~p~~a~~fYd~l~~~Las~GVD~VKv 426 (815)
.|.|+++..+. +|||.+..- ..+ -+++.+|+....+++.+.+.|++|||||+|+
T Consensus 128 -~v~~~S~l~~~-----------------hPdw~l~~~~~~~~~~r~~~vLD~~~pev~~~l~~~i~~ll~~~gidYiK~ 189 (394)
T PF02065_consen 128 -MVSPDSDLYRE-----------------HPDWVLRDPGRPPTLGRNQYVLDLSNPEVRDYLFEVIDRLLREWGIDYIKW 189 (394)
T ss_dssp -EEESSSCHCCS-----------------SBGGBTCCTTSE-ECBTTBEEB-TTSHHHHHHHHHHHHHHHHHTT-SEEEE
T ss_pred -cccchhHHHHh-----------------CccceeecCCCCCcCcccceEEcCCCHHHHHHHHHHHHHHHHhcCCCEEEe
Confidence 57888765433 344433211 011 2566778766667788889999999999999
Q ss_pred ccccchhhccCCCCC--chhHHHHHHHHHHHHHHhcCCCCcEEeeccCCCCCccc-ccccCeEEccCc
Q 003500 427 DVQNIIETLGAGHGG--RVSLTRSYHQALEASIARNFPDNGCISCMCHNTDGIYS-SKQTAVIRASDD 491 (815)
Q Consensus 427 D~q~~l~~l~~~~~g--rv~l~~ay~~AL~~s~~~~f~g~~iI~cMs~~~~~l~~-~~~~~~~R~SdD 491 (815)
|++..+...+....+ ..+...++++-++ .+++.||+.-|.+|-|.+...-+. -.+....-+||+
T Consensus 190 D~n~~~~~~~~~~~~~~~~~~~~~~y~l~~-~L~~~~P~v~iE~CssGG~R~D~g~l~~~~~~w~SD~ 256 (394)
T PF02065_consen 190 DFNRDITEAGSPSLPEGYHRYVLGLYRLLD-RLRARFPDVLIENCSSGGGRFDPGMLYYTPQSWTSDN 256 (394)
T ss_dssp E-TS-TTS-SSTTS-GHHHHHHHHHHHHHH-HHHHHTTTSEEEE-BTTBTTTSHHHHCCSSEEESBST
T ss_pred ccccCCCCCCCCCchHHHHHHHHHHHHHHH-HHHHhCCCcEEEeccCCCCccccchheeccccccCCc
Confidence 999866443322211 1233445555555 567889988888998876432211 133444455653
No 14
>COG3345 GalA Alpha-galactosidase [Carbohydrate transport and metabolism]
Probab=99.90 E-value=7.1e-23 Score=228.03 Aligned_cols=284 Identities=22% Similarity=0.304 Sum_probs=199.9
Q ss_pred eEEEEEEEeecCceEEEeecCCCCeEE----EEEecCCcceec--cccceEEEEEeCCChHHHHHHHH-HHHHHHhhccc
Q 003500 155 TIYTVFLPLLEGQFRSALQGNENNEIE----ICLESGDNAVET--NQGLYLVYTHAGPNPFEVISQAV-KAVEKYMQTFT 227 (815)
Q Consensus 155 ~~y~v~Lp~~~g~~ra~L~~~~~~~~~----i~~~sg~~~~~~--~~~~~~v~v~~g~dp~~~i~~A~-~~v~~~l~tf~ 227 (815)
.+|.+-|..| |+|++-.+-+..+... +...++.-.... +-.++.++|...+.....|++++ .++++++.. +
T Consensus 208 ~V~gf~l~~S-gnf~~f~ev~q~~~~~Vq~g~l~~~~e~~l~~~e~f~tpe~lv~~edqgl~~lsq~y~~~v~~~i~~-~ 285 (687)
T COG3345 208 EVYGFGLTYS-GNFAAFVEVHQHPFFRVQDGILPFDGEWFLEEFESFVTPEVLVVLEDQGLNGLSQKYAELVRMEIVP-R 285 (687)
T ss_pred eEEEEEEeec-cchhheeeeccCchhhhhhcccccCceEecccccccCCceEEEEEcCCCcchHHHHHHHHHHhhcCc-c
Confidence 4888888885 5577766654433211 111222221111 11245566666566688999999 477776543 2
Q ss_pred ccccccCCCcccccccccccccccccCHHHHHHHHHHHHhCCCCCcEEEEecccCcccCCCCcccchhhccccccccccC
Q 003500 228 HREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLT 307 (815)
Q Consensus 228 ~~~~K~~P~~~d~lGWCTWdaf~~~vte~~I~~~l~~L~~~Gi~~~~vIIDDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~ 307 (815)
.+.+|++| +|||||+|+|.++|++.|+++++.+++.|++ +++||||||..++|+. ..|+
T Consensus 286 ~~~~kprP-----i~~nsWea~Yfd~t~e~ile~vk~akk~gvE--~FvlDDGwfg~rndd~--------------~slG 344 (687)
T COG3345 286 PRVKKPRP-----IGWNSWEAYYFDFTEEEILENVKEAKKFGVE--LFVLDDGWFGGRNDDL--------------KSLG 344 (687)
T ss_pred cccCCCCc-----ceeeceeeeeecCCHHHHHHHHHHHhhcCeE--EEEEccccccccCcch--------------hhhh
Confidence 34667777 8999999999999999999999999999977 9999999999998865 4588
Q ss_pred CCccC-CcccccccCCcCCCChHHHHHHHHhcCCCcEEEEEeecccccCCcCCCCcccccccccccccCCCCCCCCCCCc
Q 003500 308 GIKEN-SKFQKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPD 386 (815)
Q Consensus 308 ~~~~n-~KFp~~~~~~~~p~GLk~lv~~Ik~~~Glk~vgvWHal~GYWgGI~P~s~~~~~y~~~~~~p~~spG~~~~~pd 386 (815)
||-.| +||| +|+..+++.|++ .|++ +|+|.++. +|+-+|++ | ++|||
T Consensus 345 DWlv~seKfP---------sgiE~li~~I~e-~Gl~-fGIWlePe----mvs~dSdl---f--------------rqHPD 392 (687)
T COG3345 345 DWLVNSEKFP---------SGIEELIEAIAE-NGLI-FGIWLEPE----MVSEDSDL---F--------------RQHPD 392 (687)
T ss_pred ceecchhhcc---------ccHHHHHHHHHH-cCCc-cceeecch----hcccchHH---H--------------hhCCC
Confidence 98876 8998 799999999999 7999 89999985 67777754 2 46899
Q ss_pred ceecccc----c----cccCccCHHHHHHHHHHHHHHHHhcCCCEEEEccccchhhccCCCCCc-hhHHHHHHHHHHHHH
Q 003500 387 IVMDSLA----V----HGLGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGR-VSLTRSYHQALEASI 457 (815)
Q Consensus 387 ~a~d~~~----~----~glglv~p~~a~~fYd~l~~~Las~GVD~VKvD~q~~l~~l~~~~~gr-v~l~~ay~~AL~~s~ 457 (815)
|++..-. . .++.+.+|..+...++.+...|-..-|||+|+|++..+-.++...-+. +......|+-.+. +
T Consensus 393 Wvvk~~G~p~~~~Rnqyvl~~s~p~vv~~l~~~l~qll~~~~v~ylkwdmnr~l~klg~~~~~~l~qqry~ly~l~~~-l 471 (687)
T COG3345 393 WVVKVNGYPLMAGRNQYVLWLSNPIVVLDLSEDLVQLLLFHLVSYLKWDMNRELFKLGFLFWGALPQQRYQLYRLFDQ-L 471 (687)
T ss_pred eEEecCCccccccccchhhhccChHHHHHhhhHHHHHHHhhhHHHHHHHhCcceeecCCCCCccccchHHHHHHHHHH-h
Confidence 9876321 1 113456899888999999888889999999999988765554322221 1212223555553 5
Q ss_pred HhcCCCCcEEeeccCCCC----------Cccccc------ccCeEEccCccCC
Q 003500 458 ARNFPDNGCISCMCHNTD----------GIYSSK------QTAVIRASDDYYP 494 (815)
Q Consensus 458 ~~~f~g~~iI~cMs~~~~----------~l~~~~------~~~~~R~SdDf~p 494 (815)
..+|+.....+|.+.... .+|.+. .-.+.|.+.+++|
T Consensus 472 ~~k~~~i~FeScasGg~r~d~gml~~~~~~w~Sd~~dAi~r~~iqrg~s~~~P 524 (687)
T COG3345 472 NLKFPHILFESCASGGERIDKGMLEYSPQLWCSDLTDAIGRLDIQRGGSYTYP 524 (687)
T ss_pred hhcCCCchhhhhcccccccchHHhhhcccccCCCCcchhhhccccccCcccCC
Confidence 677888888889887631 224442 2256799999999
No 15
>cd06592 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharacterized Homo sapiens protein with a glycosyl hydrolase family 31 (GH31) domain that is homologous to the Escherichia coli YihQ glucosidase. Orthologs of KIA1161 are found in eukaryotes and prokaryotes. In bacteria, YihQ (along with YihO) is important for bacterial O-antigen capsule assembly and translocation. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=99.41 E-value=1.2e-12 Score=142.84 Aligned_cols=150 Identities=18% Similarity=0.334 Sum_probs=102.8
Q ss_pred cccccccccccccccccCHHHHHHHHHHHHhCCCCCcEEEEecccCcccCCCCcccchhhccccccccccCCCcc-CCcc
Q 003500 237 FLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIKE-NSKF 315 (815)
Q Consensus 237 ~~d~lGWCTWdaf~~~vte~~I~~~l~~L~~~Gi~~~~vIIDDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~-n~KF 315 (815)
.+....||||++++..+|++.|++.++.+++.|+|+..++|||+||...+ +|+- +.||
T Consensus 11 ~~~~p~W~~W~~~~~~~s~~~v~~~~~~~~~~~iP~d~i~iD~~w~~~~g---------------------~f~~d~~~F 69 (303)
T cd06592 11 MFRSPIWSTWARYKADINQETVLNYAQEIIDNGFPNGQIEIDDNWETCYG---------------------DFDFDPTKF 69 (303)
T ss_pred HhCCCccCChhhhccCcCHHHHHHHHHHHHHcCCCCCeEEeCCCccccCC---------------------ccccChhhC
Confidence 46677899999999999999999999999999999999999999996432 3443 3689
Q ss_pred cccccCCcCCCChHHHHHHHHhcCCCcEEEEEeecccccCCcCCCCcccccccccccccCCCCCCCCCCCcceecccccc
Q 003500 316 QKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVH 395 (815)
Q Consensus 316 p~~~~~~~~p~GLk~lv~~Ik~~~Glk~vgvWHal~GYWgGI~P~s~~~~~y~~~~~~p~~spG~~~~~pd~a~d~~~~~ 395 (815)
| +++.++++||+ .|+| +++|..+. |.++++..+....+-..-+...| ..|.. ... ..
T Consensus 70 P----------dp~~mi~~l~~-~G~k-~~l~i~P~-----i~~~s~~~~e~~~~g~~vk~~~g---~~~~~-~~~--w~ 126 (303)
T cd06592 70 P----------DPKGMIDQLHD-LGFR-VTLWVHPF-----INTDSENFREAVEKGYLVSEPSG---DIPAL-TRW--WN 126 (303)
T ss_pred C----------CHHHHHHHHHH-CCCe-EEEEECCe-----eCCCCHHHHhhhhCCeEEECCCC---CCCcc-cce--ec
Confidence 8 58999999999 7999 89998874 66665432211111111111111 01100 000 11
Q ss_pred c----cCccCHHHHHHHHHHHHHH-HHhcCCCEEEEccccc
Q 003500 396 G----LGLVHPKKVFNFYNELHAY-LASCGVDGVKVDVQNI 431 (815)
Q Consensus 396 g----lglv~p~~a~~fYd~l~~~-Las~GVD~VKvD~q~~ 431 (815)
| +++.+|+ |+++|.+.++. +.+.|||++|.|++-.
T Consensus 127 g~~~~~Dftnp~-a~~w~~~~~~~~~~~~Gvdg~w~D~~E~ 166 (303)
T cd06592 127 GTAAVLDFTNPE-AVDWFLSRLKSLQEKYGIDSFKFDAGEA 166 (303)
T ss_pred CCcceEeCCCHH-HHHHHHHHHHHHHHHhCCcEEEeCCCCc
Confidence 2 3456776 55566555554 4599999999999763
No 16
>cd06593 GH31_xylosidase_YicI YicI alpha-xylosidase is a glycosyl hydrolase family 31 (GH31) enzyme that catalyzes the release of an alpha-xylosyl residue from the non-reducing end of alpha-xyloside substrates such as alpha-xylosyl fluoride and isoprimeverose. YicI forms a homohexamer (a trimer of dimers). All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. The YicI family corresponds to subgroup 4 in the Ernst et al classification of GH31 enzymes.
Probab=99.12 E-value=1e-09 Score=119.92 Aligned_cols=178 Identities=15% Similarity=0.138 Sum_probs=109.5
Q ss_pred ccCHHHHHHHHHHHHhCCCCCcEEEEecccCcccCCCCcccchhhccccccccccCCCccC-CcccccccCCcCCCChHH
Q 003500 252 DVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIKEN-SKFQKKCQNSEQVSGLKH 330 (815)
Q Consensus 252 ~vte~~I~~~l~~L~~~Gi~~~~vIIDDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~n-~KFp~~~~~~~~p~GLk~ 330 (815)
..|++.|++.++.+++.|||...++|||+|+.... +.+|.-| .||| .++.
T Consensus 20 y~~~~~v~~~~~~~~~~~iP~d~~~lD~~w~~~~~-------------------~~~f~~d~~~FP----------d~~~ 70 (308)
T cd06593 20 YYDEEEVNEFADGMRERNLPCDVIHLDCFWMKEFQ-------------------WCDFEFDPDRFP----------DPEG 70 (308)
T ss_pred CCCHHHHHHHHHHHHHcCCCeeEEEEecccccCCc-------------------ceeeEECcccCC----------CHHH
Confidence 38999999999999999999999999999994321 2356644 6898 5799
Q ss_pred HHHHHHhcCCCcEEEEEeecccccCCcCCCCcccccccccccccCCCCCCCCCCCcceeccccccc----cCccCHHHHH
Q 003500 331 VVDESKQNHNVKYVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHG----LGLVHPKKVF 406 (815)
Q Consensus 331 lv~~Ik~~~Glk~vgvWHal~GYWgGI~P~s~~~~~y~~~~~~p~~spG~~~~~pd~a~d~~~~~g----lglv~p~~a~ 406 (815)
+++++|+ .|+| +.+|..+. |.++++..+..+.+-.+.+...|..... . ...| +++.+|+ ++
T Consensus 71 ~i~~l~~-~G~~-~~~~~~P~-----i~~~~~~~~e~~~~g~~v~~~~g~~~~~-----~--~w~g~~~~~Dftnp~-a~ 135 (308)
T cd06593 71 MLSRLKE-KGFK-VCLWINPY-----IAQKSPLFKEAAEKGYLVKKPDGSVWQW-----D--LWQPGMGIIDFTNPD-AC 135 (308)
T ss_pred HHHHHHH-CCCe-EEEEecCC-----CCCCchhHHHHHHCCeEEECCCCCeeee-----c--ccCCCcccccCCCHH-HH
Confidence 9999998 7999 89999874 6676543222111111111111111000 0 0111 3445654 67
Q ss_pred HHHHHHHHHHHhcCCCEEEEccccchhhccCCCCC------chhHHHHHHHHHHHHHHhcCC-CCcEEeeccCC
Q 003500 407 NFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGG------RVSLTRSYHQALEASIARNFP-DNGCISCMCHN 473 (815)
Q Consensus 407 ~fYd~l~~~Las~GVD~VKvD~q~~l~~l~~~~~g------rv~l~~ay~~AL~~s~~~~f~-g~~iI~cMs~~ 473 (815)
+||.+.++.+.+.|||++|.|.+..+..-...+.+ +-.....|.++..+.+++..+ .|+++.+-|..
T Consensus 136 ~w~~~~~~~~~~~Gid~~~~D~~e~~p~~~~~~~g~~~~~~hn~y~~~~~~~~~~~~~~~~~~~r~~~~~Rs~~ 209 (308)
T cd06593 136 KWYKDKLKPLLDMGVDCFKTDFGERIPTDVVYYDGSDGEKMHNYYALLYNKAVYEATKEVKGEGEAVVWARSAW 209 (308)
T ss_pred HHHHHHHHHHHHhCCcEEecCCCCCCCccccccCCCCcceeeeHHHHHHHHHHHHHHHHhcCCCCeEEEEcCCc
Confidence 88888888999999999999997643211101111 112222333443333344434 35788776654
No 17
>PRK10658 putative alpha-glucosidase; Provisional
Probab=98.84 E-value=2.2e-07 Score=111.36 Aligned_cols=178 Identities=16% Similarity=0.212 Sum_probs=115.4
Q ss_pred EEEEeCCChHHHHHHHHHHHHHHhhcccccccccCCCcccccccccccccccccCHHHHHHHHHHHHhCCCCCcEEEEec
Q 003500 200 VYTHAGPNPFEVISQAVKAVEKYMQTFTHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDD 279 (815)
Q Consensus 200 v~v~~g~dp~~~i~~A~~~v~~~l~tf~~~~~K~~P~~~d~lGWCTWdaf~~~vte~~I~~~l~~L~~~Gi~~~~vIIDD 279 (815)
.|+-.|.+|-+++++-.++ .+. ..-+|.|.-++=.|+ .|+.+-+|+.|++.++.+++.+||+..+.||+
T Consensus 238 yy~~~G~tp~~v~~~Yt~L----TGr-----p~lpP~WalG~w~s~--~~~~~~~e~~v~~~~~~~r~~~iP~d~i~lD~ 306 (665)
T PRK10658 238 YFVIDGPTPKEVLDRYTAL----TGR-----PALPPAWSFGLWLTT--SFTTNYDEATVNSFIDGMAERDLPLHVFHFDC 306 (665)
T ss_pred EEEEeCCCHHHHHHHHHHH----hCC-----CCCCchhhhheeeec--ccccCCCHHHHHHHHHHHHHcCCCceEEEEch
Confidence 6777899988887764432 222 122455654442233 35566789999999999999999999999999
Q ss_pred ccCcccCCCCcccchhhccccccccccCCCc-cCCcccccccCCcCCCChHHHHHHHHhcCCCcEEEEEeecccccCCcC
Q 003500 280 GWQQIENKPKEESNCIVQEGAQFASRLTGIK-ENSKFQKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGVK 358 (815)
Q Consensus 280 GWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~-~n~KFp~~~~~~~~p~GLk~lv~~Ik~~~Glk~vgvWHal~GYWgGI~ 358 (815)
.|++... |.+|+ .+.+|| ..+.+++++|+ .|+| +.+|..+ +|.
T Consensus 307 ~w~~~~~-------------------~~~f~wd~~~FP----------dp~~mi~~L~~-~G~k-~~~~i~P-----~i~ 350 (665)
T PRK10658 307 FWMKEFQ-------------------WCDFEWDPRTFP----------DPEGMLKRLKA-KGLK-ICVWINP-----YIA 350 (665)
T ss_pred hhhcCCc-------------------eeeeEEChhhCC----------CHHHHHHHHHH-CCCE-EEEeccC-----CcC
Confidence 9986421 33455 347899 45889999999 6999 8899766 366
Q ss_pred CCCcccccccccccccCCCCCCCCCCCcceeccccccc---cCccCHHHHHHHHHHHHHHHHhcCCCEEEEccccc
Q 003500 359 PAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHG---LGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNI 431 (815)
Q Consensus 359 P~s~~~~~y~~~~~~p~~spG~~~~~pd~a~d~~~~~g---lglv~p~~a~~fYd~l~~~Las~GVD~VKvD~q~~ 431 (815)
++++..+.-..+-.+.+...|. .+..+.+. ++ ++..+|+ |+++|.+.++.|.+.|||++|.|+.-.
T Consensus 351 ~~s~~f~e~~~~gy~vk~~~G~-----~~~~~~W~-g~~~~~Dftnp~-ar~W~~~~~~~l~d~Gvdgfw~D~gE~ 419 (665)
T PRK10658 351 QKSPLFKEGKEKGYLLKRPDGS-----VWQWDKWQ-PGMAIVDFTNPD-ACKWYADKLKGLLDMGVDCFKTDFGER 419 (665)
T ss_pred CCchHHHHHHHCCeEEECCCCC-----EeeeeecC-CCceeecCCCHH-HHHHHHHHHHHHHhcCCcEEEecCCce
Confidence 6654322111111111111121 12222221 22 3445665 788888888889999999999997643
No 18
>cd06595 GH31_xylosidase_XylS-like This family represents an uncharacterized glycosyl hydrolase family 31 (GH31) enzyme found in bacteria and eukaryotes that is related to the XylS xylosidase of Sulfolobus solfataricus. Alpha-xylosidases catalyze the release of an alpha-xylose residue from the non-reducing end of alpha-xyloside substrates. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=98.74 E-value=2.4e-07 Score=100.86 Aligned_cols=210 Identities=19% Similarity=0.157 Sum_probs=124.7
Q ss_pred CCCcccccccccccccccccCHHHHHHHHHHHHhCCCCCcEEEEecccCcccCCCCcccchhhccccccccccCCCcc-C
Q 003500 234 LPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIKE-N 312 (815)
Q Consensus 234 ~P~~~d~lGWCTWdaf~~~vte~~I~~~l~~L~~~Gi~~~~vIIDDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~-n 312 (815)
+|.+.=++=+|.|. + .|+++|++.++.+++.|||...|.||++|+..+.... ...++.+|+= +
T Consensus 7 ~P~walG~~qsr~~-y---~s~~ev~~v~~~~r~~~iP~D~i~lD~dw~~~~~~~~------------~~~~~~~ft~d~ 70 (292)
T cd06595 7 LPRYAFGNWWSRYW-P---YSDEEYLALMDRFKKHNIPLDVLVIDMDWHVTDIPSK------------YGSGWTGYSWNR 70 (292)
T ss_pred CchHHHHhHhhCCc-C---CCHHHHHHHHHHHHHhCCCccEEEEeccccccccccc------------ccCCcceeEECh
Confidence 45555455568763 2 3889999999999999999999999999987543211 0012445663 4
Q ss_pred CcccccccCCcCCCChHHHHHHHHhcCCCcEEEEEeecccccCCcCCCCcccccccccccccCCCCCCCCCCCcceeccc
Q 003500 313 SKFQKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSL 392 (815)
Q Consensus 313 ~KFp~~~~~~~~p~GLk~lv~~Ik~~~Glk~vgvWHal~GYWgGI~P~s~~~~~y~~~~~~p~~spG~~~~~pd~a~d~~ 392 (815)
.+|| +.+.+++++|+ .|+| +.+|.-+. -++.+..+ .|+. +.. ..+........
T Consensus 71 ~~FP----------dp~~mi~~Lh~-~G~k-~v~~v~P~---~~~~~~~~---~y~~-~~~---~~~~~~~~~~~----- 123 (292)
T cd06595 71 KLFP----------DPEKLLQDLHD-RGLK-VTLNLHPA---DGIRAHED---QYPE-MAK---ALGVDPATEGP----- 123 (292)
T ss_pred hcCC----------CHHHHHHHHHH-CCCE-EEEEeCCC---cccCCCcH---HHHH-HHH---hcCCCcccCCe-----
Confidence 7899 56999999999 6999 66886653 13333321 2332 100 00110000000
Q ss_pred cccccCccCHHHHHHHHHHHHHHHHhcCCCEEEEccccchhhccCCCCCchhH--HHHHHHHHHHHHHhcCCCCcEEeec
Q 003500 393 AVHGLGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSL--TRSYHQALEASIARNFPDNGCISCM 470 (815)
Q Consensus 393 ~~~glglv~p~~a~~fYd~l~~~Las~GVD~VKvD~q~~l~~l~~~~~grv~l--~~ay~~AL~~s~~~~f~g~~iI~cM 470 (815)
.=+++++|+..+.|++.+++.|.+.|||++|.|++-..... ..+..... ....+.... + -..|++|.+=
T Consensus 124 --~~~D~tnp~a~~~w~~~~~~~~~~~Gidg~W~D~~E~~~~~--~~~~~~~~~~~~~~y~~~~----~-~~~r~f~lsR 194 (292)
T cd06595 124 --ILFDLTNPKFMDAYFDNVHRPLEKQGVDFWWLDWQQGNRTR--TPGLDPLWWLNHVHYLDSA----R-NGRRPLIFSR 194 (292)
T ss_pred --EEecCCCHHHHHHHHHHHHHHHHhcCCcEEEecCCCCcccc--cCCcchHHHHHHHHHHHhh----c-cCCCcEEEEe
Confidence 00345778777778899999999999999999986432111 11111111 122222222 1 1357788777
Q ss_pred cCCCCCcccccccCeEEccCccCCCCccch
Q 003500 471 CHNTDGIYSSKQTAVIRASDDYYPRDPASH 500 (815)
Q Consensus 471 s~~~~~l~~~~~~~~~R~SdDf~p~~p~~~ 500 (815)
|.... ..+++..| |.|....|..+.
T Consensus 195 s~~~G---~qry~~~W--sGD~~s~W~~l~ 219 (292)
T cd06595 195 WAGLG---SHRYPIGF--SGDTIISWASLA 219 (292)
T ss_pred ecccC---CCcCCCcc--CCCcccCHHHHH
Confidence 64322 23566666 788877776544
No 19
>cd06598 GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide-synthesizing enzyme Z) is a bacterial 6-alpha-glucosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsY. CtsZ and CtsY both have a glycosyl hydrolase family 31 (GH31) catalytic domain. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=98.68 E-value=2.9e-07 Score=101.43 Aligned_cols=155 Identities=17% Similarity=0.166 Sum_probs=99.8
Q ss_pred CCCcccccccccccccccccCHHHHHHHHHHHHhCCCCCcEEEEecccCcccCCCCcccchhhccccccccccCCCcc-C
Q 003500 234 LPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIKE-N 312 (815)
Q Consensus 234 ~P~~~d~lGWCTWdaf~~~vte~~I~~~l~~L~~~Gi~~~~vIIDDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~-n 312 (815)
+|.+.=++=.|.|. | -+++.|++.++.+++.+||+..|.||++|+..+.+.. ...+|.- .
T Consensus 6 ~P~wa~G~~~s~~~-y---~~~~~v~~~~~~~~~~~iP~d~i~lD~~w~~~~~~~~---------------~~~~f~wd~ 66 (317)
T cd06598 6 PPRWALGNWASRFG-Y---RNWQEVDDTIKTLREKDFPLDAAILDLYWFGKDIDKG---------------HMGNLDWDR 66 (317)
T ss_pred CchHHHHHHHhcCC-C---CCHHHHHHHHHHHHHhCCCceEEEEechhhcCcccCC---------------ceeeeEecc
Confidence 45555455566763 2 3799999999999999999999999999987554211 1234553 4
Q ss_pred CcccccccCCcCCCChHHHHHHHHhcCCCcEEEEEeecccccCCcCCCCccccccccccc-ccCCCCCCCCCCCcceecc
Q 003500 313 SKFQKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGVKPAADGMEHYDTALA-YPVTSPGVMGNQPDIVMDS 391 (815)
Q Consensus 313 ~KFp~~~~~~~~p~GLk~lv~~Ik~~~Glk~vgvWHal~GYWgGI~P~s~~~~~y~~~~~-~p~~spG~~~~~pd~a~d~ 391 (815)
+||| ..+.+++++|+ .|+| +.+|..+. |.++++..+.-..+-. ......| .| ...+.
T Consensus 67 ~~FP----------dp~~mi~~L~~-~G~k-~~~~v~P~-----v~~~~~~y~e~~~~g~l~~~~~~~----~~-~~~~~ 124 (317)
T cd06598 67 KAFP----------DPAGMIADLAK-KGVK-TIVITEPF-----VLKNSKNWGEAVKAGALLKKDQGG----VP-TLFDF 124 (317)
T ss_pred ccCC----------CHHHHHHHHHH-cCCc-EEEEEcCc-----ccCCchhHHHHHhCCCEEEECCCC----CE-eeeec
Confidence 7899 56899999999 6999 77887653 6665533111111110 0000001 11 00011
Q ss_pred cc-ccc-cCccCHHHHHHHHHHHHHHHHhcCCCEEEEcccc
Q 003500 392 LA-VHG-LGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQN 430 (815)
Q Consensus 392 ~~-~~g-lglv~p~~a~~fYd~l~~~Las~GVD~VKvD~q~ 430 (815)
+. ..+ +++.+|+ ++++|.+.++.+.+.|||++|.|++-
T Consensus 125 w~g~~~~~Dftnp~-a~~w~~~~~~~~~~~Gvdg~w~D~~E 164 (317)
T cd06598 125 WFGNTGLIDWFDPA-AQAWFHDNYKKLIDQGVTGWWGDLGE 164 (317)
T ss_pred cCCCccccCCCCHH-HHHHHHHHHHHhhhCCccEEEecCCC
Confidence 10 011 3456776 78899989999999999999999974
No 20
>PRK10426 alpha-glucosidase; Provisional
Probab=98.66 E-value=6.2e-06 Score=98.79 Aligned_cols=238 Identities=13% Similarity=0.150 Sum_probs=130.5
Q ss_pred EEEEeCCChHHHHHHHHHHHHHHhhcccccccccCCCccc-ccccccccccccccCHHHHHHHHHHHHhCCCCCcEEEEe
Q 003500 200 VYTHAGPNPFEVISQAVKAVEKYMQTFTHREKKKLPSFLD-WFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIID 278 (815)
Q Consensus 200 v~v~~g~dp~~~i~~A~~~v~~~l~tf~~~~~K~~P~~~d-~lGWCTWdaf~~~vte~~I~~~l~~L~~~Gi~~~~vIID 278 (815)
+++-.|++|-++|++-..+ .+. ..-+|.|.- ++ |-.++ -+++.|++.++.+++.|||+..|.||
T Consensus 179 ~y~~~G~~~~~vi~~yt~l----tGr-----~p~~P~Wal~G~----~~g~~--~~~~~v~~v~~~~r~~~IP~d~i~ld 243 (635)
T PRK10426 179 LRFECADTYISLLEKLTAL----FGR-----QPELPDWAYDGV----TLGIQ--GGTEVVQKKLDTMRNAGVKVNGIWAQ 243 (635)
T ss_pred EEEEeCCCHHHHHHHHHHh----hCC-----CCCCChhhccCc----ccccc--CCHHHHHHHHHHHHHcCCCeeEEEEe
Confidence 6677899988877665442 121 112455532 33 22232 25788999999999999999999998
Q ss_pred cccCcccCCCCcccchhhccccccc-cccCCCcc-CCcccccccCCcCCCChHHHHHHHHhcCCCcEEEEEeecccccCC
Q 003500 279 DGWQQIENKPKEESNCIVQEGAQFA-SRLTGIKE-NSKFQKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGG 356 (815)
Q Consensus 279 DGWQ~~~~~~~~~~~~~~~~~~~~~-~~L~~~~~-n~KFp~~~~~~~~p~GLk~lv~~Ik~~~Glk~vgvWHal~GYWgG 356 (815)
| |+..+... |. +-+.+|+- .++|| +.+.+++++|+ .|+| +-+|.-+ +
T Consensus 244 d-w~~~~~~~-------------~g~~~~~~~~~d~~~FP----------dp~~mi~~L~~-~G~k-~v~~i~P-----~ 292 (635)
T PRK10426 244 D-WSGIRMTS-------------FGKRLMWNWKWDSERYP----------QLDSRIKQLNE-EGIQ-FLGYINP-----Y 292 (635)
T ss_pred c-cccccccc-------------ccccccccceEChhhCC----------CHHHHHHHHHH-CCCE-EEEEEcC-----c
Confidence 5 98654321 11 11234553 37898 67999999999 6999 6777655 3
Q ss_pred cCCCCcccccccccccccCCCCCCCCCCCcceecccc-ccc-cCccCHHHHHHHH-HHHHHHHHhcCCCEEEEccccchh
Q 003500 357 VKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLA-VHG-LGLVHPKKVFNFY-NELHAYLASCGVDGVKVDVQNIIE 433 (815)
Q Consensus 357 I~P~s~~~~~y~~~~~~p~~spG~~~~~pd~a~d~~~-~~g-lglv~p~~a~~fY-d~l~~~Las~GVD~VKvD~q~~l~ 433 (815)
|.++.+..+.-..+-.+.+...|. +...+... ..+ +++.+|+ |+++| +.+++.|.+.|||++|.|++-.+.
T Consensus 293 v~~~~~~y~e~~~~gy~vk~~~g~-----~~~~~~~~~~~~~~Dftnp~-ar~Ww~~~~~~~~~~~Gvdg~w~D~~E~~p 366 (635)
T PRK10426 293 LASDGDLCEEAAEKGYLAKDADGG-----DYLVEFGEFYAGVVDLTNPE-AYEWFKEVIKKNMIGLGCSGWMADFGEYLP 366 (635)
T ss_pred cCCCCHHHHHHHHCCcEEECCCCC-----EEEeEecCCCceeecCCCHH-HHHHHHHHHHHHHhhcCCCEEeeeCCCCCC
Confidence 655543321111111111111111 11111110 011 3456776 55565 566678999999999999865432
Q ss_pred hcc---CCCCCc-------hhHHHHHHHHHHHHHHhcCC-CCcEEeeccCCCCCcccccccCeEEccCccCCCCc
Q 003500 434 TLG---AGHGGR-------VSLTRSYHQALEASIARNFP-DNGCISCMCHNTDGIYSSKQTAVIRASDDYYPRDP 497 (815)
Q Consensus 434 ~l~---~~~~gr-------v~l~~ay~~AL~~s~~~~f~-g~~iI~cMs~~~~~l~~~~~~~~~R~SdDf~p~~p 497 (815)
.-. .+...+ ...+++.++|+++ ..+ +|+++.+-|...- ..+++.+.- |.|-...|.
T Consensus 367 ~d~~~~~g~~~~~~hN~Y~~l~~~~~~e~~~~----~~~~~r~f~ltRsg~aG---sQry~~~~W-sGD~~ssW~ 433 (635)
T PRK10426 367 TDAYLHNGVSAEIMHNAWPALWAKCNYEALEE----TGKLGEILFFMRAGYTG---SQKYSTLFW-AGDQNVDWS 433 (635)
T ss_pred CcceeeCCCCHHHhccHHHHHHHHHHHHHHHH----hcCCCCcEEEEccccCC---cCCcccccc-CCCCCCcCc
Confidence 111 111111 0223444555543 222 5777777665321 124444322 556666665
No 21
>cd06591 GH31_xylosidase_XylS XylS is a glycosyl hydrolase family 31 (GH31) alpha-xylosidase found in prokaryotes, eukaryotes, and archaea, that catalyzes the release of alpha-xylose from the non-reducing terminal side of the alpha-xyloside substrate. XylS has been characterized in Sulfolobus solfataricus where it hydrolyzes isoprimeverose, the p-nitrophenyl-beta derivative of isoprimeverose, and xyloglucan oligosaccharides, and has transxylosidic activity. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. The XylS family corresponds to subgroup 3 in the Ernst et al classification of GH31 enzymes.
Probab=98.63 E-value=5.4e-07 Score=99.38 Aligned_cols=149 Identities=17% Similarity=0.148 Sum_probs=98.8
Q ss_pred CCCcccccccccccccccccCHHHHHHHHHHHHhCCCCCcEEEEecccCcccCCCCcccchhhccccccccccCCCcc-C
Q 003500 234 LPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIKE-N 312 (815)
Q Consensus 234 ~P~~~d~lGWCTWdaf~~~vte~~I~~~l~~L~~~Gi~~~~vIIDDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~-n 312 (815)
+|.+.=++=+|.|.- -+++.|++.++.+++.+||+..++||..|+...+ +.+|.- .
T Consensus 6 ~P~walG~~~sr~~y----~~~~ev~~~~~~~~~~~iP~d~i~lD~~~~~~~~-------------------~~~f~~d~ 62 (319)
T cd06591 6 MPKWAYGFWQSKERY----KTQEELLDVAKEYRKRGIPLDVIVQDWFYWPKQG-------------------WGEWKFDP 62 (319)
T ss_pred CchHHHHHHHhcccC----CCHHHHHHHHHHHHHhCCCccEEEEechhhcCCC-------------------ceeEEECh
Confidence 345554555676632 3899999999999999999999999998875322 234553 3
Q ss_pred CcccccccCCcCCCChHHHHHHHHhcCCCcEEEEEeecccccCCcCCCCcccccccccccccCCCCCCCCCCCcceeccc
Q 003500 313 SKFQKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSL 392 (815)
Q Consensus 313 ~KFp~~~~~~~~p~GLk~lv~~Ik~~~Glk~vgvWHal~GYWgGI~P~s~~~~~y~~~~~~p~~spG~~~~~pd~a~d~~ 392 (815)
+||| ..+.+++++|+ .|+| +.+|.-+. |.++++..+..+.+-.+-+...|.... .
T Consensus 63 ~~FP----------dp~~mi~~L~~-~G~k-v~~~i~P~-----v~~~~~~y~e~~~~g~~v~~~~g~~~~--------~ 117 (319)
T cd06591 63 ERFP----------DPKAMVRELHE-MNAE-LMISIWPT-----FGPETENYKEMDEKGYLIKTDRGPRVT--------M 117 (319)
T ss_pred hhCC----------CHHHHHHHHHH-CCCE-EEEEecCC-----cCCCChhHHHHHHCCEEEEcCCCCeee--------e
Confidence 6898 57999999998 6999 66776653 666654333222222111111121100 0
Q ss_pred cccc----cCccCHHHHHHHHHHHHHHHHhcCCCEEEEcccc
Q 003500 393 AVHG----LGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQN 430 (815)
Q Consensus 393 ~~~g----lglv~p~~a~~fYd~l~~~Las~GVD~VKvD~q~ 430 (815)
...| +++.+|+....|++.+++.|.+.|||++|.|++-
T Consensus 118 ~w~g~~~~~Dftnp~a~~w~~~~~~~~~~~~Gvdg~w~D~~E 159 (319)
T cd06591 118 QFGGNTRFYDATNPEAREYYWKQLKKNYYDKGVDAWWLDAAE 159 (319)
T ss_pred eCCCCccccCCCCHHHHHHHHHHHHHHhhcCCCcEEEecCCC
Confidence 0112 4556777555566888999999999999999975
No 22
>cd06599 GH31_glycosidase_Aec37 Glycosyl hydrolase family 31 (GH31) domain of a bacterial protein family represented by Escherichia coli protein Aec37. The gene encoding Aec37 (aec-37) is located within a genomic island (AGI-3) isolated from the extraintestinal avian pathogenic Escherichia coli strain BEN2908. The function of Aec37 and its orthologs is unknown; however, deletion of a region of the genome that includes aec-37 affects the assimilation of seven carbohydrates, decreases growth rate of the strain in minimal medium containing galacturonate or trehalose, and attenuates the virulence of E. coli BEN2908 in chickens. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=98.62 E-value=1.8e-07 Score=103.06 Aligned_cols=155 Identities=14% Similarity=0.181 Sum_probs=98.7
Q ss_pred CCCcccccccccccccc--cccCHHHHHHHHHHHHhCCCCCcEEEEecccCcccCCCCcccchhhccccccccccCCCc-
Q 003500 234 LPSFLDWFGWCTWDAFY--TDVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIK- 310 (815)
Q Consensus 234 ~P~~~d~lGWCTWdaf~--~~vte~~I~~~l~~L~~~Gi~~~~vIIDDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~- 310 (815)
+|.|.=++=.|.| .|. .+.+++.|++.++.+++.+||+..+.||++|++..... ..+|+
T Consensus 6 pP~walG~~~sr~-~Y~~~~~~~q~~v~~~~~~~r~~~iP~d~i~ld~~~~~~~~~~-----------------~~~f~~ 67 (317)
T cd06599 6 VPRWSLGYSGSTM-YYTELDPDAQEALLEFIDKCREHDIPCDSFHLSSGYTSIEGGK-----------------RYVFNW 67 (317)
T ss_pred CchHHHHHHhcCC-CCCCCCccHHHHHHHHHHHHHHcCCCeeEEEEeccccccCCCc-----------------eeeeec
Confidence 3455555666777 232 24679999999999999999999999999999763211 11233
Q ss_pred cCCcccccccCCcCCCChHHHHHHHHhcCCCcEEEEEeecccccCCcCCCCcccccccccccccCCCCCCCCCCCcceec
Q 003500 311 ENSKFQKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMD 390 (815)
Q Consensus 311 ~n~KFp~~~~~~~~p~GLk~lv~~Ik~~~Glk~vgvWHal~GYWgGI~P~s~~~~~y~~~~~~p~~spG~~~~~pd~a~d 390 (815)
..++|| ..+.+++++|+ .|+| +.+|.-+. |.++++..+..+.+-.+-+...| ..|... .
T Consensus 68 d~~~FP----------dp~~mi~~L~~-~g~k-~~~~i~P~-----i~~~~~~y~e~~~~g~~v~~~~g---~~~~~~-~ 126 (317)
T cd06599 68 NKDRFP----------DPAAFVAKFHE-RGIR-LAPNIKPG-----LLQDHPRYKELKEAGAFIKPPDG---REPSIG-Q 126 (317)
T ss_pred CcccCC----------CHHHHHHHHHH-CCCE-EEEEeCCc-----ccCCCHHHHHHHHCCcEEEcCCC---CCccee-c
Confidence 237898 67999999999 6999 77887764 66655432222222111111111 111110 0
Q ss_pred cccccc----cCccCHHHHHHHHHH-HHHHHHhcCCCEEEEcccc
Q 003500 391 SLAVHG----LGLVHPKKVFNFYNE-LHAYLASCGVDGVKVDVQN 430 (815)
Q Consensus 391 ~~~~~g----lglv~p~~a~~fYd~-l~~~Las~GVD~VKvD~q~ 430 (815)
. ..| +++.+|+ |+++|.. +.+.|.+.|||++|.|.+-
T Consensus 127 ~--w~g~~~~~Dftnp~-a~~ww~~~~~~~~~~~Gvdg~w~D~~E 168 (317)
T cd06599 127 F--WGGVGSFVDFTNPE-GREWWKEGVKEALLDLGIDSTWNDNNE 168 (317)
T ss_pred c--cCCCeEeecCCChH-HHHHHHHHHHHHHhcCCCcEEEecCCC
Confidence 0 122 3456776 5666655 4488899999999999874
No 23
>cd06597 GH31_transferase_CtsY CtsY (cyclic tetrasaccharide-synthesizing enzyme Y) is a bacterial 3-alpha-isomaltosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsZ. CtsY and CtsZ both have a glycosyl hydrolase family 31 (GH31) catalytic domain. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=98.52 E-value=3.5e-06 Score=93.80 Aligned_cols=221 Identities=19% Similarity=0.256 Sum_probs=116.9
Q ss_pred CCCcccccccccccccccccCHHHHHHHHHHHHhCCCCCcEEEEecccCcccC-----CCCcccchhhccccccccccCC
Q 003500 234 LPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQQIEN-----KPKEESNCIVQEGAQFASRLTG 308 (815)
Q Consensus 234 ~P~~~d~lGWCTWdaf~~~vte~~I~~~l~~L~~~Gi~~~~vIIDDGWQ~~~~-----~~~~~~~~~~~~~~~~~~~L~~ 308 (815)
+|.+.=++..|.|. --|+++|++.++.+++.|||+..|.||| ||..+. |.. . . .......|. +.+
T Consensus 6 pP~walG~~~sr~~----Y~~~~ev~~v~~~~~~~~iP~d~i~lD~-W~~~~~~~~w~d~~-y-~-~~~~~~~~~--~~~ 75 (340)
T cd06597 6 LPKWAFGLWMSANE----WDTQAEVMRQMDAHEEHGIPVTVVVIEQ-WSDEATFYVFNDAQ-Y-T-PKDGGAPLS--YDD 75 (340)
T ss_pred CchHHhhhhhhccC----CCCHHHHHHHHHHHHHcCCCeeEEEEec-ccCcceeeeeccch-h-c-ccccCCcce--ecc
Confidence 45666566777763 3689999999999999999999999996 987532 100 0 0 000001111 111
Q ss_pred --CccCCcccccccCCcCCCChHHHHHHHHhcCCCcEEEEEeecccccCCcCCCCcc-cc---ccc---ccccccCCCCC
Q 003500 309 --IKENSKFQKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGVKPAADG-ME---HYD---TALAYPVTSPG 379 (815)
Q Consensus 309 --~~~n~KFp~~~~~~~~p~GLk~lv~~Ik~~~Glk~vgvWHal~GYWgGI~P~s~~-~~---~y~---~~~~~p~~spG 379 (815)
|...+||| ..+.+|+++|+ .|+| +.+|..+. |.++... .. .|+ .+-.+-+.+.|
T Consensus 76 ~~f~~~~~FP----------dp~~mi~~Lh~-~G~k-v~l~v~P~-----i~~~~~~~~~~~~~~~~~~~~g~~vk~~~G 138 (340)
T cd06597 76 FSFPVEGRWP----------NPKGMIDELHE-QGVK-VLLWQIPI-----IKLRPHPHGQADNDEDYAVAQNYLVQRGVG 138 (340)
T ss_pred cccCccccCC----------CHHHHHHHHHH-CCCE-EEEEecCc-----cccccccccccchhHHHHHHCCEEEEcCCC
Confidence 22234676 67999999999 6999 78887764 5443210 00 010 00001111111
Q ss_pred CCCCCCcceeccccccc----cCccCHHHHHHHHHHHHHHHH-hcCCCEEEEccccch---hhc-cCCCCCc-------h
Q 003500 380 VMGNQPDIVMDSLAVHG----LGLVHPKKVFNFYNELHAYLA-SCGVDGVKVDVQNII---ETL-GAGHGGR-------V 443 (815)
Q Consensus 380 ~~~~~pd~a~d~~~~~g----lglv~p~~a~~fYd~l~~~La-s~GVD~VKvD~q~~l---~~l-~~~~~gr-------v 443 (815)
.....|. ...| +++.+|+ |+++|.+.++.+- +.|||++|.|+.-.. +.. ..+..++ .
T Consensus 139 ~~~~~~~------~W~g~~~~~Dftnp~-a~~Ww~~~~~~~~~~~Gidg~w~D~~E~~~~~~~~~~~g~~~~~~hN~y~~ 211 (340)
T cd06597 139 KPYRIPG------QWFPDSLMLDFTNPE-AAQWWMEKRRYLVDELGIDGFKTDGGEHVWGRDLHFRDGRRGDEMRNTYPN 211 (340)
T ss_pred Ccccccc------ccCCCceeecCCCHH-HHHHHHHHHHHHHHhcCCcEEEecCCCccCCCCceecCCCcHHHhhcccHH
Confidence 1000010 0112 4556776 5567777666654 799999999986431 000 0110011 1
Q ss_pred hHHHHHHHHHHHHHHhcCCCCcEEeeccCCCCCcccccccCeEEccCccCCCCcc
Q 003500 444 SLTRSYHQALEASIARNFPDNGCISCMCHNTDGIYSSKQTAVIRASDDYYPRDPA 498 (815)
Q Consensus 444 ~l~~ay~~AL~~s~~~~f~g~~iI~cMs~~~~~l~~~~~~~~~R~SdDf~p~~p~ 498 (815)
..++++++++ ++. ..|++|.+-|.... ..+++..| |.|....|..
T Consensus 212 ~~~~~~~e~~----~~~-~~r~filtRs~~~G---sqry~~~W--sGD~~s~W~~ 256 (340)
T cd06597 212 HYVRAYNDFL----RRA-KKDGVTFSRAGYTG---AQAHGIFW--AGDENSTFGA 256 (340)
T ss_pred HHHHHHHHHH----Hhc-cCCcEEEEecccCc---cCCCccee--cCCCCCCHHH
Confidence 2234444443 333 45777777665421 12444444 6666666653
No 24
>cd06594 GH31_glucosidase_YihQ YihQ is a bacterial alpha-glucosidase with a conserved glycosyl hydrolase family 31 (GH31) domain that catalyzes the release of an alpha-glucosyl residue from the non-reducing end of alpha-glucoside substrates such as alpha-glucosyl fluoride. Orthologs of YihQ that have not yet been functionally characterized are present in plants and fungi. YihQ has sequence similarity to other GH31 enzymes such as CtsZ, a 6-alpha-glucosyltransferase from Bacillus globisporus, and YicI, an alpha-xylosidase from Echerichia coli. In bacteria, YihQ (along with YihO) is important for bacterial O-antigen capsule assembly and translocation.
Probab=98.51 E-value=2.4e-06 Score=94.19 Aligned_cols=216 Identities=16% Similarity=0.159 Sum_probs=116.6
Q ss_pred CCCcccccccccccccccccCHHHHHHHHHHHHhCCCCCcEEEEecccCcccCCCCcccchhhccccccccccCCCc-cC
Q 003500 234 LPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIK-EN 312 (815)
Q Consensus 234 ~P~~~d~lGWCTWdaf~~~vte~~I~~~l~~L~~~Gi~~~~vIIDDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~-~n 312 (815)
+|.+.-++=+|.+. . ++++|++.++.+++.+||+..+.|| .|+....... |. +.+.+|+ ..
T Consensus 6 ~P~wa~G~~~~~~~---~--s~~~v~~~~~~~~~~~iP~d~i~ld-dw~~~~~~~~---------g~---~~~~~f~~d~ 67 (317)
T cd06594 6 LPDWAYGGAILGLQ---G--GTDKVLEALEKARAAGVKVAGLWLQ-DWTGRRETSF---------GD---RLWWNWEWDP 67 (317)
T ss_pred CchhhhCcEEeeee---C--CHHHHHHHHHHHHHcCCCeeEEEEc-cccCcccccc---------cc---eeeeeeEECh
Confidence 55666554445432 2 9999999999999999999999999 5865321110 00 0122344 34
Q ss_pred CcccccccCCcCCCChHHHHHHHHhcCCCcEEEEEeecccccCCcCCCCcccccccccc---cccCCCCCCCCCCCccee
Q 003500 313 SKFQKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGVKPAADGMEHYDTAL---AYPVTSPGVMGNQPDIVM 389 (815)
Q Consensus 313 ~KFp~~~~~~~~p~GLk~lv~~Ik~~~Glk~vgvWHal~GYWgGI~P~s~~~~~y~~~~---~~p~~spG~~~~~pd~a~ 389 (815)
++|| ..+.+++++|+ .|+| +.+|.-+. |.+++... |+... .+.+...|. | ...
T Consensus 68 ~~FP----------dp~~mi~~Lh~-~G~~-~~~~i~P~-----v~~~~~~~--y~~~~~~g~~vk~~~g~----~-~~~ 123 (317)
T cd06594 68 ERYP----------GLDELIEELKA-RGIR-VLTYINPY-----LADDGPLY--YEEAKDAGYLVKDADGS----P-YLV 123 (317)
T ss_pred hhCC----------CHHHHHHHHHH-CCCE-EEEEecCc-----eecCCchh--HHHHHHCCeEEECCCCC----e-eee
Confidence 6898 57999999999 6999 77887653 66654221 23221 111111111 1 000
Q ss_pred ccccccc----cCccCHHHHHHHHHHHHHHHHhcCCCEEEEccccchhhccCCCCC--chh----HHHHHHHHHHHHHHh
Q 003500 390 DSLAVHG----LGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGG--RVS----LTRSYHQALEASIAR 459 (815)
Q Consensus 390 d~~~~~g----lglv~p~~a~~fYd~l~~~Las~GVD~VKvD~q~~l~~l~~~~~g--rv~----l~~ay~~AL~~s~~~ 459 (815)
.. ..| +++.+|+...-|.+.+.+++.+.|||++|.|++-.+..-...+.| ... ....|.+|....+.+
T Consensus 124 ~~--w~g~~~~~Dftnp~a~~ww~~~~~~~~~~~Gvdg~w~D~~E~~p~d~~~~~g~~~~~~hN~y~~~~~~~~~~~~~~ 201 (317)
T cd06594 124 DF--GEFDCGVLDLTNPAARDWFKQVIKEMLLDLGLSGWMADFGEYLPFDAVLHSGEDAATMHNRYPELWAKLNREAVEE 201 (317)
T ss_pred cc--CCCCceeeecCCHHHHHHHHHHHHHHhhhcCCcEEEecCCCCCCCcceecCCCCHHHHhhHHHHHHHHHHHHHHHH
Confidence 11 112 345677754444466666668999999999987532110001111 111 222233333333334
Q ss_pred cCC-CCcEEeeccCCCCCcccccccCeEEccCccCCCCc
Q 003500 460 NFP-DNGCISCMCHNTDGIYSSKQTAVIRASDDYYPRDP 497 (815)
Q Consensus 460 ~f~-g~~iI~cMs~~~~~l~~~~~~~~~R~SdDf~p~~p 497 (815)
..+ .|++|.+=|.... ..+++.+.+ |.|....|.
T Consensus 202 ~~~~~r~fvltRs~~~G---sqry~~~~W-sGD~~s~W~ 236 (317)
T cd06594 202 AGKTGDILFFMRSGFTG---SQKYSTLFW-AGDQMVSWD 236 (317)
T ss_pred hccCCCeEEEEcccccc---ccccccccc-CCCCCCCCc
Confidence 333 4567777664321 124444333 455555554
No 25
>PF01055 Glyco_hydro_31: Glycosyl hydrolases family 31 ; InterPro: IPR000322 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 31 GH31 from CAZY comprises enzymes with several known activities; alpha-glucosidase (3.2.1.20 from EC), alpha-galactosidase (3.2.1.22 from EC); glucoamylase (3.2.1.3 from EC), sucrase-isomaltase (3.2.1.48 from EC); isomaltase (3.2.1.10 from EC); alpha-xylosidase (3.2.1 from EC); alpha-glucan lyase (4.2.2.13 from EC). Glycoside hydrolase family 31 groups a number of glycosyl hydrolases on the basis of sequence similarities [, , ] An aspartic acid has been implicated [] in the catalytic activity of sucrase, isomaltase, and lysosomal alpha-glucosidase.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3L4U_A 3L4X_A 3L4W_A 3L4V_A 3CTT_A 2QMJ_A 2QLY_A 3L4Z_A 3L4Y_A 3L4T_A ....
Probab=98.46 E-value=3.9e-06 Score=96.21 Aligned_cols=171 Identities=24% Similarity=0.380 Sum_probs=100.4
Q ss_pred EEEeCCChHHHHHHHHHHHHHHhhcccccccccCCCcccccccccccccccccCHHHHHHHHHHHHhCCCCCcEEEEecc
Q 003500 201 YTHAGPNPFEVISQAVKAVEKYMQTFTHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDG 280 (815)
Q Consensus 201 ~v~~g~dp~~~i~~A~~~v~~~l~tf~~~~~K~~P~~~d~lGWCTWdaf~~~vte~~I~~~l~~L~~~Gi~~~~vIIDDG 280 (815)
|+=.|++|-++|++-.++ .+. ...+|.+.-++=+|.|.. -|++.|.+.++.+++.++|+..+.||++
T Consensus 1 y~~~G~~~~~v~~~y~~l----tG~-----~~~pP~walG~~~~~~~~----~~~~~v~~~i~~~~~~~iP~d~~~iD~~ 67 (441)
T PF01055_consen 1 YFFSGPTPKEVLRQYTEL----TGR-----PPLPPRWALGFWQSRWGY----YNQDEVREVIDRYRSNGIPLDVIWIDDD 67 (441)
T ss_dssp EEEEESSHHHHHHHHHHH----HSS-----S----GGGGSEEEEESTB----TSHHHHHHHHHHHHHTT--EEEEEE-GG
T ss_pred CEEeCcCHHHHHHHHHHH----HCC-----CCCCchhhhceEeecCcC----CCHHHHHHHHHHHHHcCCCccceecccc
Confidence 344677876666555443 232 233566665665666643 5699999999999999999999999999
Q ss_pred cCcccCCCCcccchhhccccccccccCCCcc-CCcccccccCCcCCCChHHHHHHHHhcCCCcEEEEEeecccccCCcCC
Q 003500 281 WQQIENKPKEESNCIVQEGAQFASRLTGIKE-NSKFQKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGVKP 359 (815)
Q Consensus 281 WQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~-n~KFp~~~~~~~~p~GLk~lv~~Ik~~~Glk~vgvWHal~GYWgGI~P 359 (815)
|+....+ |+- ..+|| +++.+++.+|+ .|+| +.+|..+. |.+
T Consensus 68 ~~~~~~~---------------------f~~d~~~FP----------d~~~~~~~l~~-~G~~-~~~~~~P~-----v~~ 109 (441)
T PF01055_consen 68 YQDGYGD---------------------FTWDPERFP----------DPKQMIDELHD-QGIK-VVLWVHPF-----VSN 109 (441)
T ss_dssp GSBTTBT---------------------T-B-TTTTT----------THHHHHHHHHH-TT-E-EEEEEESE-----EET
T ss_pred ccccccc---------------------ccccccccc----------chHHHHHhHhh-CCcE-EEEEeecc-----cCC
Confidence 9974332 332 36898 78999999999 6999 88998874 666
Q ss_pred CCcccccccccc---cccCCCCCCCCCCCcceeccccccc----cCccCHHHHHHHHHHHHHHHHhc-CCCEEEEcccc
Q 003500 360 AADGMEHYDTAL---AYPVTSPGVMGNQPDIVMDSLAVHG----LGLVHPKKVFNFYNELHAYLASC-GVDGVKVDVQN 430 (815)
Q Consensus 360 ~s~~~~~y~~~~---~~p~~spG~~~~~pd~a~d~~~~~g----lglv~p~~a~~fYd~l~~~Las~-GVD~VKvD~q~ 430 (815)
++...+.|+... .+-+...| ++ ..... ..| +++.+|+ +.++|.+.++.+.+. ||||+|.|.+-
T Consensus 110 ~~~~~~~~~~~~~~~~~v~~~~g----~~--~~~~~-w~g~~~~~Dftnp~-a~~w~~~~~~~~~~~~Gvdg~w~D~~E 180 (441)
T PF01055_consen 110 DSPDYENYDEAKEKGYLVKNPDG----SP--YIGRV-WPGKGGFIDFTNPE-ARDWWKEQLKELLDDYGVDGWWLDFGE 180 (441)
T ss_dssp TTTB-HHHHHHHHTT-BEBCTTS----SB---EEEE-TTEEEEEB-TTSHH-HHHHHHHHHHHHHTTST-SEEEEESTT
T ss_pred CCCcchhhhhHhhcCceeecccC----Cc--ccccc-cCCcccccCCCChh-HHHHHHHHHHHHHhccCCceEEeecCC
Confidence 654111232211 01011111 11 00001 122 3455665 777776666656555 99999999954
No 26
>cd06604 GH31_glucosidase_II_MalA Alpha-glucosidase II (alpha-D-glucoside glucohydrolase) is a glycosyl hydrolase family 31 (GH31) enzyme, found in bacteria and plants, which has exo-alpha-1,4-glucosidase and oligo-1,6-glucosidase activities. Alpha-glucosidase II has been characterized in Bacillus thermoamyloliquefaciens where it forms a homohexamer. This family also includes the MalA alpha-glucosidase from Sulfolobus sulfataricus and the AglA alpha-glucosidase from Picrophilus torridus. MalA is part of the carbohydrate-metabolizing machinery that allows this organism to utilize carbohydrates, such as maltose, as the sole carbon and energy source.
Probab=98.39 E-value=1.3e-06 Score=97.00 Aligned_cols=146 Identities=19% Similarity=0.273 Sum_probs=92.9
Q ss_pred CCCcccccccccccccccccCHHHHHHHHHHHHhCCCCCcEEEEecccCcccCCCCcccchhhccccccccccCCCc-cC
Q 003500 234 LPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIK-EN 312 (815)
Q Consensus 234 ~P~~~d~lGWCTWdaf~~~vte~~I~~~l~~L~~~Gi~~~~vIIDDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~-~n 312 (815)
+|.+.=++=.|.|.. -|++.|++.++.+++.|||+..+.||++|+.... .|+ ..
T Consensus 6 ~P~walG~~~s~~~y----~~~~~v~~~~~~~~~~~iP~d~i~lD~~~~~~~~---------------------~f~~d~ 60 (339)
T cd06604 6 PPKWALGYQQSRWSY----YPEEEVREIADEFRERDIPCDAIYLDIDYMDGYR---------------------VFTWDK 60 (339)
T ss_pred CchHHHhHHhcCCCC----CCHHHHHHHHHHHHHhCCCcceEEECchhhCCCC---------------------ceeecc
Confidence 455553443444432 3889999999999999999999999999996432 233 23
Q ss_pred CcccccccCCcCCCChHHHHHHHHhcCCCcEEEEEeecccccCCcCCCCcccccccccc---cccCCCCCCCCCCCccee
Q 003500 313 SKFQKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGVKPAADGMEHYDTAL---AYPVTSPGVMGNQPDIVM 389 (815)
Q Consensus 313 ~KFp~~~~~~~~p~GLk~lv~~Ik~~~Glk~vgvWHal~GYWgGI~P~s~~~~~y~~~~---~~p~~spG~~~~~pd~a~ 389 (815)
+||| +.+.+++++|+ .|+| +.+|..+.- .+.+..+ .|+... .+-+...|. | ...
T Consensus 61 ~~fP----------dp~~m~~~l~~-~g~~-~~~~~~P~v---~~~~~~~---~~~e~~~~g~~v~~~~g~----~-~~~ 117 (339)
T cd06604 61 ERFP----------DPKELIKELHE-QGFK-VVTIIDPGV---KVDPGYD---VYEEGLENDYFVKDPDGE----L-YIG 117 (339)
T ss_pred ccCC----------CHHHHHHHHHH-CCCE-EEEEEeCce---eCCCCCh---HHHHHHHCCeEEECCCCC----E-EEE
Confidence 6898 56999999999 6999 788887641 1222221 122111 000111111 1 000
Q ss_pred ccccccc----cCccCHHHHHHHHHHHHHHHHhcCCCEEEEcccc
Q 003500 390 DSLAVHG----LGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQN 430 (815)
Q Consensus 390 d~~~~~g----lglv~p~~a~~fYd~l~~~Las~GVD~VKvD~q~ 430 (815)
.. ..| +++.+|+ |.++|.+.++.+.+.|||++|.|.+-
T Consensus 118 ~~--w~g~~~~~Dftnp~-a~~ww~~~~~~~~~~Gvdg~w~D~~E 159 (339)
T cd06604 118 RV--WPGLSAFPDFTNPK-VREWWGSLYKKFVDLGVDGIWNDMNE 159 (339)
T ss_pred Ee--cCCCccccCCCChH-HHHHHHHHHHHHhhCCCceEeecCCC
Confidence 00 112 3556666 66788888888889999999999874
No 27
>cd06589 GH31 The enzymes of glycosyl hydrolase family 31 (GH31) occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. In most cases, the pyranose moiety recognized in subsite -1 of the substrate binding site is an alpha-D-glucose, though some GH31 family members show a preference for alpha-D-xylose. Several GH31 enzymes can accommodate both glucose and xylose and different levels of discrimination between the two have been observed. Most characterized GH31 enzymes are alpha-glucosidases. In mammals, GH31 members with alpha-glucosidase activity are implicated in at least three distinct biological processes
Probab=98.36 E-value=1.3e-05 Score=86.10 Aligned_cols=74 Identities=20% Similarity=0.313 Sum_probs=58.2
Q ss_pred cccccccccCHHHHHHHHHHHHhCCCCCcEEEEecccCcccCCCCcccchhhccccccccccCCCcc-CCcccccccCCc
Q 003500 245 TWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIKE-NSKFQKKCQNSE 323 (815)
Q Consensus 245 TWdaf~~~vte~~I~~~l~~L~~~Gi~~~~vIIDDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~-n~KFp~~~~~~~ 323 (815)
.|-+.+...|++.|++.++.+++.++|...+.|||+|+...++. .++- .++||
T Consensus 13 ~~~~~~~~~~~~~v~~~~~~~~~~~iP~d~~~lD~~~~~~~~~f-------------------~~~~d~~~Fp------- 66 (265)
T cd06589 13 YWLSRYGYGDQDKVLEVIDGMRENDIPLDGFVLDDDYTDGYGDF-------------------TFDWDAGKFP------- 66 (265)
T ss_pred HHHhcCCCCCHHHHHHHHHHHHHcCCCccEEEECcccccCCcee-------------------eeecChhhCC-------
Confidence 44455556799999999999999999999999999999765431 0232 36898
Q ss_pred CCCChHHHHHHHHhcCCCcEEEEEee
Q 003500 324 QVSGLKHVVDESKQNHNVKYVYVWHA 349 (815)
Q Consensus 324 ~p~GLk~lv~~Ik~~~Glk~vgvWHa 349 (815)
..+.+++++|+ .|+| +.+|..
T Consensus 67 ---dp~~~i~~l~~-~g~~-~~~~~~ 87 (265)
T cd06589 67 ---NPKSMIDELHD-NGVK-LVLWID 87 (265)
T ss_pred ---CHHHHHHHHHH-CCCE-EEEEeC
Confidence 57999999999 6999 667633
No 28
>cd06602 GH31_MGAM_SI_GAA This family includes the following three closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), and lysosomal acid alpha-glucosidase (GAA), also known as acid-maltase. MGAM is one of the two enzymes responsible for catalyzing the last glucose-releasing step in starch digestion. SI is implicated in the digestion of dietary starch and major disaccharides such as sucrose and isomaltose, while GAA degrades glycogen in the lysosome, cleaving both alpha-1,4 and alpha-1,6 glucosidic linkages. MGAM and SI are anchored to small-intestinal brush-border epithelial cells. The absence of SI from the brush border membrane or its malfunction is associated with malabsorption disorders such as congenital sucrase-isomaltase deficiency (CSID). The domain architectures of MGAM and SI include two tandem GH31 catalytic domains, an N-terminal domain found near the membrane-bound end, and a C-terminal luminal domain. Both of
Probab=98.35 E-value=5.6e-06 Score=92.16 Aligned_cols=187 Identities=16% Similarity=0.195 Sum_probs=108.4
Q ss_pred CCCcccccccccccccccccCHHHHHHHHHHHHhCCCCCcEEEEecccCcccCCCCcccchhhccccccccccCCCcc-C
Q 003500 234 LPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIKE-N 312 (815)
Q Consensus 234 ~P~~~d~lGWCTWdaf~~~vte~~I~~~l~~L~~~Gi~~~~vIIDDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~-n 312 (815)
+|.+.=++=+|.|.. -+++.|++.++.+++.+||+..+.||++|+...++ |+- .
T Consensus 6 pP~walG~~~s~~~y----~~~~~v~~~~~~~r~~~iP~d~i~lD~~~~~~~~~---------------------f~~d~ 60 (339)
T cd06602 6 PPYWALGFHLCRWGY----KNVDEVKEVVENMRAAGIPLDVQWNDIDYMDRRRD---------------------FTLDP 60 (339)
T ss_pred CchHHhhhHhcCCCC----CCHHHHHHHHHHHHHhCCCcceEEECcccccCccc---------------------eeccc
Confidence 456666666788733 37899999999999999999999999999965432 332 3
Q ss_pred CcccccccCCcCCCChHHHHHHHHhcCCCcEEEEEeecccccCCcCCCC--cccccccccc---cccCCCCCCCCCCCcc
Q 003500 313 SKFQKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGVKPAA--DGMEHYDTAL---AYPVTSPGVMGNQPDI 387 (815)
Q Consensus 313 ~KFp~~~~~~~~p~GLk~lv~~Ik~~~Glk~vgvWHal~GYWgGI~P~s--~~~~~y~~~~---~~p~~spG~~~~~pd~ 387 (815)
++||++ -++.+++++|+ .|+| +.+|..+. |.++. .....|+... .+-+...|. |-
T Consensus 61 ~~FPdp--------~~~~mi~~L~~-~G~k-~~~~i~P~-----v~~~~~~~~~~~~~e~~~~g~~v~~~~g~----~~- 120 (339)
T cd06602 61 VRFPGL--------KMPEFVDELHA-NGQH-YVPILDPA-----ISANEPTGSYPPYDRGLEMDVFIKNDDGS----PY- 120 (339)
T ss_pred ccCCCc--------cHHHHHHHHHH-CCCE-EEEEEeCc-----cccCcCCCCCHHHHHHHHCCeEEECCCCC----EE-
Confidence 689932 23999999999 6999 78887663 54431 0111122111 000111111 10
Q ss_pred eeccccccc----cCccCHHHHHHHHHHHHH-HHHhcCCCEEEEccccchhhccCCCCCc-hhHHHHHHHHHHHHHHhcC
Q 003500 388 VMDSLAVHG----LGLVHPKKVFNFYNELHA-YLASCGVDGVKVDVQNIIETLGAGHGGR-VSLTRSYHQALEASIARNF 461 (815)
Q Consensus 388 a~d~~~~~g----lglv~p~~a~~fYd~l~~-~Las~GVD~VKvD~q~~l~~l~~~~~gr-v~l~~ay~~AL~~s~~~~f 461 (815)
.... ..| +++.+|+ |.++|.+.++ ++.+.|||++|.|++-.... ..-+.-- -..+++.++++++. -
T Consensus 121 ~~~~--w~g~~~~~Dftnp~-a~~ww~~~~~~~~~~~Gvdg~w~D~~Ep~~~-~~~hN~y~~~~~~~~~~~~~~~----~ 192 (339)
T cd06602 121 IGKV--WPGYTVFPDFLNPN-TQEWWTDEIKDFHDQVPFDGLWIDMNEPSNF-YDVHNLYGLSEAIATYKALQSI----P 192 (339)
T ss_pred EEEe--CCCCCcCcCCCCHH-HHHHHHHHHHHHHhcCCCcEEEecCCCCchH-hhhcchhhHHHHHHHHHHHHhc----C
Confidence 0000 112 3556776 5666666555 56678999999998643211 0001000 12234445555432 2
Q ss_pred CCCcEEeeccCC
Q 003500 462 PDNGCISCMCHN 473 (815)
Q Consensus 462 ~g~~iI~cMs~~ 473 (815)
..|+.|.+-|..
T Consensus 193 ~~r~~~~sRs~~ 204 (339)
T cd06602 193 GKRPFVISRSTF 204 (339)
T ss_pred CCCCEEEEecCc
Confidence 346777777654
No 29
>cd06600 GH31_MGAM-like This family includes the following closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), lysosomal acid alpha-glucosidase (GAA), neutral alpha-glucosidase C (GANC), the alpha subunit of neutral alpha-glucosidase AB (GANAB), and alpha-glucosidase II. MGAM is one of the two enzymes responsible for catalyzing the last glucose-releasing step in starch digestion. SI is implicated in the digestion of dietary starch and major disaccharides such as sucrose and isomaltose, while GAA degrades glycogen in the lysosome, cleaving both alpha-1,4 and alpha-1,6 glucosidic linkages. MGAM and SI are anchored to small-intestinal brush-border epithelial cells. The absence of SI from the brush border membrane or its malfunction is associated with malabsorption disorders such as congenital sucrase-isomaltase deficiency (CSID). The domain architectures of MGAM and SI include two tandem GH31 catalytic domains, an N-terminal do
Probab=98.26 E-value=1e-05 Score=89.35 Aligned_cols=185 Identities=14% Similarity=0.165 Sum_probs=106.9
Q ss_pred CCCcccccccccccccccccCHHHHHHHHHHHHhCCCCCcEEEEecccCcccCCCCcccchhhccccccccccCCCccCC
Q 003500 234 LPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIKENS 313 (815)
Q Consensus 234 ~P~~~d~lGWCTWdaf~~~vte~~I~~~l~~L~~~Gi~~~~vIIDDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~n~ 313 (815)
+|.+.=++=.|.|. | -|+++|++.++.+++.++|...+.||++|++...+ ..| ...
T Consensus 6 pP~walG~~~sr~~-y---~~~~~v~~~~~~~~~~~iP~d~i~lD~~~~~~~~~-------------------f~~-d~~ 61 (317)
T cd06600 6 PPMWALGYHISRYS-Y---YPQDKVVEVVDIMQKEGFPYDVVFLDIHYMDSYRL-------------------FTW-DPY 61 (317)
T ss_pred CchHHHHHHhcCCC-C---CCHHHHHHHHHHHHHcCCCcceEEEChhhhCCCCc-------------------eee-chh
Confidence 34555555567765 2 37999999999999999999999999999864322 123 246
Q ss_pred cccccccCCcCCCChHHHHHHHHhcCCCcEEEEEeecccccCCcCCCCccccccccc---ccccCCCCCCCCCCCcceec
Q 003500 314 KFQKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGVKPAADGMEHYDTA---LAYPVTSPGVMGNQPDIVMD 390 (815)
Q Consensus 314 KFp~~~~~~~~p~GLk~lv~~Ik~~~Glk~vgvWHal~GYWgGI~P~s~~~~~y~~~---~~~p~~spG~~~~~pd~a~d 390 (815)
+|| ..+.+++++|+ .|+| +.+|..+. |.++... ..|+.. -.+-+...| .|-.. .
T Consensus 62 ~FP----------dp~~~i~~l~~-~g~k-~~~~~~P~-----i~~~~~~-~~~~~~~~~~~~v~~~~g----~~~~~-~ 118 (317)
T cd06600 62 RFP----------EPKKLIDELHK-RNVK-LVTIVDPG-----IRVDQNY-SPFLSGMDKGKFCEIESG----ELFVG-K 118 (317)
T ss_pred cCC----------CHHHHHHHHHH-CCCE-EEEEeecc-----ccCCCCC-hHHHHHHHCCEEEECCCC----CeEEE-e
Confidence 898 56899999999 6999 78887764 5544211 112111 001011111 11100 0
Q ss_pred cccccc----cCccCHHHHHHHHHHHHHH-HHhcCCCEEEEccccchhhccCCCCCc-hhHHHHHHHHHHHHHHhcC-CC
Q 003500 391 SLAVHG----LGLVHPKKVFNFYNELHAY-LASCGVDGVKVDVQNIIETLGAGHGGR-VSLTRSYHQALEASIARNF-PD 463 (815)
Q Consensus 391 ~~~~~g----lglv~p~~a~~fYd~l~~~-Las~GVD~VKvD~q~~l~~l~~~~~gr-v~l~~ay~~AL~~s~~~~f-~g 463 (815)
...| +++.+|+ +.++|.+.++. +.+.|||++|.|++-... +..-+.-. ...+++.+++++. .+ ..
T Consensus 119 --~w~G~~~~~Dftnp~-a~~ww~~~~~~~~~~~gvdg~w~D~~Ep~~-~~~~hn~y~~~~~~a~~~~~~~----~~~~~ 190 (317)
T cd06600 119 --MWPGTTVYPDFTNPD-TREWWAGLFSEWLNSQGVDGIWLDMNEPSD-FEKVHNLYGLYEAMATAEGFRT----SHPRN 190 (317)
T ss_pred --ecCCCccccCCCChH-HHHHHHHHHHHHhhcCCCceEEeeCCCCcc-HHHhcchhhHHHHHHHHHHHHH----hcCCC
Confidence 0123 3456776 55566555554 458999999999864210 00001100 1234445555543 33 35
Q ss_pred CcEEeeccCC
Q 003500 464 NGCISCMCHN 473 (815)
Q Consensus 464 ~~iI~cMs~~ 473 (815)
|+++.+-|..
T Consensus 191 r~~~~sRs~~ 200 (317)
T cd06600 191 RIFILTRSGF 200 (317)
T ss_pred CceEEEeccc
Confidence 6777777654
No 30
>COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism]
Probab=98.13 E-value=0.00014 Score=88.62 Aligned_cols=237 Identities=17% Similarity=0.191 Sum_probs=138.2
Q ss_pred eEEEEEeCCChHHHHHHHHHHHHHHhhcccccccccCCCcccccccccccccccccCHHHHHHHHHHHHhCCCCCcEEEE
Q 003500 198 YLVYTHAGPNPFEVISQAVKAVEKYMQTFTHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLII 277 (815)
Q Consensus 198 ~~v~v~~g~dp~~~i~~A~~~v~~~l~tf~~~~~K~~P~~~d~lGWCTWdaf~~~vte~~I~~~l~~L~~~Gi~~~~vII 277 (815)
.-.||-+|++|-+++++-.. ..+. +.-+|.|. || |.|-..+..-+|+.+.+.++.+++..||+..+.+
T Consensus 234 ldyyv~~G~~~~~vi~~yt~----lTGk-----p~l~P~Wa--~G-~~~~~~~~~~~e~~v~~~i~~~~~~~IP~d~~~l 301 (772)
T COG1501 234 LDYYVIAGPTPKDVLEKYTD----LTGK-----PPLPPKWA--LG-WLWTSRYTYYDEDEVLEFIDEMRERDIPLDVFVL 301 (772)
T ss_pred EEEEEEeCCCHHHHHHHHHH----hhCC-----CCCCCcee--cC-CCceeccccccHHHHHHHHhhcccccCcceEEEE
Confidence 34889999997444333222 2222 12245555 55 6777777888999999999999999999999999
Q ss_pred ecc-cCcccCCCCcccchhhccccccccccCCCccC-CcccccccCCcCCCChHHHHHHHHhcCCCcEEEEEeecccccC
Q 003500 278 DDG-WQQIENKPKEESNCIVQEGAQFASRLTGIKEN-SKFQKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWG 355 (815)
Q Consensus 278 DDG-WQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~n-~KFp~~~~~~~~p~GLk~lv~~Ik~~~Glk~vgvWHal~GYWg 355 (815)
|-. |-+. +..|+-| .+|| ..+.+++++|+ .|+| +-+|.-+.
T Consensus 302 D~~~~~~~---------------------~~~F~wd~~~FP----------~pk~mi~~l~~-~Gik-l~~~i~P~---- 344 (772)
T COG1501 302 DIDFWMDN---------------------WGDFTWDPDRFP----------DPKQMIAELHE-KGIK-LIVIINPY---- 344 (772)
T ss_pred eehhhhcc---------------------ccceEECcccCC----------CHHHHHHHHHh-cCce-EEEEeccc----
Confidence 987 7651 2345544 7899 45899999999 6999 55665553
Q ss_pred CcCCCCcccccccccccccCCCCCCCCCCCcceeccccccc--cCccCHHHHHHHHH-HHHHHHHhcCCCEEEEccccch
Q 003500 356 GVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHG--LGLVHPKKVFNFYN-ELHAYLASCGVDGVKVDVQNII 432 (815)
Q Consensus 356 GI~P~s~~~~~y~~~~~~p~~spG~~~~~pd~a~d~~~~~g--lglv~p~~a~~fYd-~l~~~Las~GVD~VKvD~q~~l 432 (815)
|..+.+..+.-..+-..-+...|. .+-.+.+...+ ++.++|+ ++++|- ..++.|.+-|||++|.|++-..
T Consensus 345 -i~~d~~~~~e~~~~Gy~~k~~~g~-----~~~~~~w~~~~a~~DFtnp~-~r~Ww~~~~~~~l~d~Gv~g~W~D~nEp~ 417 (772)
T COG1501 345 -IKQDSPLFKEAIEKGYFVKDPDGE-----IYQADFWPGNSAFPDFTNPD-AREWWASDKKKNLLDLGVDGFWNDMNEPE 417 (772)
T ss_pred -cccCCchHHHHHHCCeEEECCCCC-----EeeecccCCcccccCCCCHH-HHHHHHHHHHhHHHhcCccEEEccCCCCc
Confidence 545543321111111000111111 11122221111 2345665 666766 7888999999999999997543
Q ss_pred hhccC--CCCCch---------hHHHHHHHHHHHHHHhcCCCCcEEeeccCCCCCcccccccCeEEccCccCCCCcc
Q 003500 433 ETLGA--GHGGRV---------SLTRSYHQALEASIARNFPDNGCISCMCHNTDGIYSSKQTAVIRASDDYYPRDPA 498 (815)
Q Consensus 433 ~~l~~--~~~grv---------~l~~ay~~AL~~s~~~~f~g~~iI~cMs~~~~~l~~~~~~~~~R~SdDf~p~~p~ 498 (815)
-..+. +.+... -.++++++|+++.. -..+++|.+-|.+...- +.+.+| |.|.-..|..
T Consensus 418 ~~~~~~~~~g~~~~~~~N~yp~~~~~a~~~~~~~~~---~~~r~~~lsRsg~aG~Q---~~~~~W--sGD~~s~wd~ 486 (772)
T COG1501 418 PFDGDGFGNGIDHEEMHNLYPLLYAKAVYEALKELG---GNERPFILSRSGYAGSQ---RYAAHW--SGDNRSSWDS 486 (772)
T ss_pred cccccccccccCHHHHhcchhHHHHHHHHHHHHhhc---CCCceEEEEecccccce---ecccee--CCccccchHH
Confidence 22111 112211 33666677776442 12567888877654211 222333 5555555544
No 31
>cd06601 GH31_lyase_GLase GLases (alpha-1,4-glucan lyases) are glycosyl hydrolase family 31 (GH31) enzymes that degrade alpha-1,4-glucans and maltooligosaccharides via a nonhydrolytic pathway to yield 1,5-D-anhydrofructose from the nonreducing end. GLases cleave the bond between C1 and O1 of the nonreducing sugar residue of alpha-glucans to generate a monosaccharide product with a double bond between C1 and C2. This family corresponds to subgroup 2 in the Ernst et al classification of GH31 enzymes.
Probab=98.08 E-value=2e-05 Score=87.50 Aligned_cols=127 Identities=18% Similarity=0.234 Sum_probs=88.7
Q ss_pred CCCcccccccccccccccccCHHHHHHHHHHHHhCCCCCcEEEEecccCcccCCCCcccchhhccccccccccCCCcc-C
Q 003500 234 LPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIKE-N 312 (815)
Q Consensus 234 ~P~~~d~lGWCTWdaf~~~vte~~I~~~l~~L~~~Gi~~~~vIIDDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~-n 312 (815)
+|-|.=++-.|.|.- -|+++|++.++.+++.+||+..+.||+.|+...+ +|.- .
T Consensus 6 pP~WalG~~qsr~~Y----~~~~ev~~v~~~~r~~~IP~D~i~lDidy~~~~~---------------------~Ft~d~ 60 (332)
T cd06601 6 KPRYALGFHQGCYGY----SNRSDLEEVVEGYRDNNIPLDGLHVDVDFQDNYR---------------------TFTTNG 60 (332)
T ss_pred CchHHhhhhhCCCCC----CCHHHHHHHHHHHHHcCCCCceEEEcCchhcCCC---------------------ceeecC
Confidence 345555566677642 3899999999999999999999999999996433 2342 3
Q ss_pred CcccccccCCcCCCChHHHHHHHHhcCCCcEEEEEeecccccCCcCCCCcccccccccccccCCCCCCCCCCCcceeccc
Q 003500 313 SKFQKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSL 392 (815)
Q Consensus 313 ~KFp~~~~~~~~p~GLk~lv~~Ik~~~Glk~vgvWHal~GYWgGI~P~s~~~~~y~~~~~~p~~spG~~~~~pd~a~d~~ 392 (815)
.+|| ..+.++++||+ .|+| +.+|.-+. |. |.. .. ++. ..-||
T Consensus 61 ~~FP----------dp~~mv~~L~~-~G~k-lv~~i~P~-----i~--------~g~--~~----~~~-~~~pD------ 102 (332)
T cd06601 61 GGFP----------NPKEMFDNLHN-KGLK-CSTNITPV-----IS--------YGG--GL----GSP-GLYPD------ 102 (332)
T ss_pred CCCC----------CHHHHHHHHHH-CCCe-EEEEecCc-----ee--------cCc--cC----CCC-ceeeC------
Confidence 6898 46899999998 6999 55664332 21 110 01 110 11122
Q ss_pred cccccCccCHHHHHHHHHHHHHHHHhcCCCEEEEcccc
Q 003500 393 AVHGLGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQN 430 (815)
Q Consensus 393 ~~~glglv~p~~a~~fYd~l~~~Las~GVD~VKvD~q~ 430 (815)
+.+| +++++|.+.++.|.+.|||+++.|++-
T Consensus 103 ------ftnp-~ar~wW~~~~~~l~~~Gv~~~W~DmnE 133 (332)
T cd06601 103 ------LGRP-DVREWWGNQYKYLFDIGLEFVWQDMTT 133 (332)
T ss_pred ------CCCH-HHHHHHHHHHHHHHhCCCceeecCCCC
Confidence 3455 477799999999999999999999863
No 32
>PF10566 Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: IPR019563 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is the 97th family of glycosidases, in this case bacterial. The central part of the GH97 family protein sequences represents a typical and complete (beta/alpha)8-barrel or catalytic TIM-barrel type domain. The N- and C-terminal parts of the sequences, mainly consisting of beta-strands, most probably form two additional non-catalytic domains with as yet unknown functions. The non-catalytic domains of glycosidases from the alpha-galactosidase and alpha-glucosidase superfamilies are also predominantly composed of beta-strands, and at least some of these domains are involved in oligomerisation and carbohydrate binding. In all known glycosidases with the (beta-alpha)8-barrel fold, the amino acid residues at the active site are located on the C-termini of the beta-strands []. ; PDB: 2JKP_A 2JKE_A 2D73_B 2ZQ0_B 2JKA_A 3A24_A.
Probab=98.02 E-value=4.4e-05 Score=82.35 Aligned_cols=179 Identities=17% Similarity=0.273 Sum_probs=99.3
Q ss_pred cccccccCHHHHHHHHHHHHhCCCCCcEEEEecccCcccCCCCcccchhhccccccccccCCCccCCcccccccCCcCCC
Q 003500 247 DAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIKENSKFQKKCQNSEQVS 326 (815)
Q Consensus 247 daf~~~vte~~I~~~l~~L~~~Gi~~~~vIIDDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~n~KFp~~~~~~~~p~ 326 (815)
..|-..+|-+..++.++-.++.|++ |++||+||.....+.. .++. ...| ..
T Consensus 23 ~~~~~g~~t~~~k~yIDfAa~~G~e--YvlvD~GW~~~~~~~~-----------------~d~~--~~~~--------~~ 73 (273)
T PF10566_consen 23 VGFKHGATTETQKRYIDFAAEMGIE--YVLVDAGWYGWEKDDD-----------------FDFT--KPIP--------DF 73 (273)
T ss_dssp BSS-BSSSHHHHHHHHHHHHHTT-S--EEEEBTTCCGS--TTT-------------------TT---B-T--------T-
T ss_pred CCCcCCCCHHHHHHHHHHHHHcCCC--EEEecccccccccccc-----------------cccc--ccCC--------cc
Confidence 3455678999999999999999999 9999999987333221 0111 1111 14
Q ss_pred ChHHHHHHHHhcCCCcEEEEEeecccccCCcCCCCcccccccccccccCCCCCCCCCCCcceeccccccccCccCHHHHH
Q 003500 327 GLKHVVDESKQNHNVKYVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHGLGLVHPKKVF 406 (815)
Q Consensus 327 GLk~lv~~Ik~~~Glk~vgvWHal~GYWgGI~P~s~~~~~y~~~~~~p~~spG~~~~~pd~a~d~~~~~glglv~p~~a~ 406 (815)
.|+.+|++.|+| |++ |-+|-.-.++|+.. .| + -+
T Consensus 74 dl~elv~Ya~~K-gVg-i~lw~~~~~~~~~~--------~~-----------------------------------~-~~ 107 (273)
T PF10566_consen 74 DLPELVDYAKEK-GVG-IWLWYHSETGGNVA--------NL-----------------------------------E-KQ 107 (273)
T ss_dssp -HHHHHHHHHHT-T-E-EEEEEECCHTTBHH--------HH-----------------------------------H-CC
T ss_pred CHHHHHHHHHHc-CCC-EEEEEeCCcchhhH--------hH-----------------------------------H-HH
Confidence 899999999995 988 77774432222110 00 0 01
Q ss_pred HHHHHHHHHHHhcCCCEEEEccccchhhccCCCCCchhHHHHHHHHHHHHHHhcCCCCcEEeeccCC-CCCcccccccCe
Q 003500 407 NFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASIARNFPDNGCISCMCHN-TDGIYSSKQTAV 485 (815)
Q Consensus 407 ~fYd~l~~~Las~GVD~VKvD~q~~l~~l~~~~~grv~l~~ay~~AL~~s~~~~f~g~~iI~cMs~~-~~~l~~~~~~~~ 485 (815)
.++.++.+++|||.+||+|.... ......+-|++.+++++..+ =+|+=-... |.. +.+++-|+
T Consensus 108 --~~~~f~~~~~~Gv~GvKidF~~~---------d~Q~~v~~y~~i~~~AA~~~----LmvnfHg~~kPtG-~~RTyPN~ 171 (273)
T PF10566_consen 108 --LDEAFKLYAKWGVKGVKIDFMDR---------DDQEMVNWYEDILEDAAEYK----LMVNFHGATKPTG-LRRTYPNL 171 (273)
T ss_dssp --HHHHHHHHHHCTEEEEEEE--SS---------TSHHHHHHHHHHHHHHHHTT-----EEEETTS---TT-HHHCSTTE
T ss_pred --HHHHHHHHHHcCCCEEeeCcCCC---------CCHHHHHHHHHHHHHHHHcC----cEEEecCCcCCCc-ccccCccH
Confidence 26677889999999999998542 23456777888888774332 133322211 222 23344444
Q ss_pred E-----EccCc-cCCCCccchhhHHHHhhhhhhhccC
Q 003500 486 I-----RASDD-YYPRDPASHTIHISSVAYNTLFLGE 516 (815)
Q Consensus 486 ~-----R~SdD-f~p~~p~~~~~Hi~~na~nsl~~g~ 516 (815)
+ |-... +|+........|.....|.+.+.|+
T Consensus 172 mT~EgVrG~E~~~~~~~~~~~p~h~~~lPFTR~l~Gp 208 (273)
T PF10566_consen 172 MTREGVRGQEYNKWSGDGGNPPEHNTTLPFTRMLAGP 208 (273)
T ss_dssp EEE--S--GGGGGTT-TTS-HCCHHCTCCCTCCCCS-
T ss_pred HHHHHhhhhhhcccccCCCCCCcceeeccchhcCcCC
Confidence 3 33332 3332223344565666677777776
No 33
>cd06603 GH31_GANC_GANAB_alpha This family includes the closely related glycosyl hydrolase family 31 (GH31) isozymes, neutral alpha-glucosidase C (GANC) and the alpha subunit of heterodimeric neutral alpha-glucosidase AB (GANAB). Initially distinguished on the basis of differences in electrophoretic mobility in starch gel, GANC and GANAB have been shown to have other differences, including those of substrate specificity. GANC and GANAB are key enzymes in glycogen metabolism that hydrolyze terminal, non-reducing 1,4-linked alpha-D-glucose residues from glycogen in the endoplasmic reticulum. The GANC/GANAB family includes the alpha-glucosidase II (ModA) from Dictyostelium discoideum as well as the alpha-glucosidase II (GLS2, or ROT2 - Reversal of TOR2 lethality protein 2) from Saccharomyces cerevisiae.
Probab=97.94 E-value=2.6e-05 Score=86.80 Aligned_cols=147 Identities=17% Similarity=0.170 Sum_probs=91.8
Q ss_pred CCCcccccccccccccccccCHHHHHHHHHHHHhCCCCCcEEEEecccCcccCCCCcccchhhccccccccccCCCccCC
Q 003500 234 LPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIKENS 313 (815)
Q Consensus 234 ~P~~~d~lGWCTWdaf~~~vte~~I~~~l~~L~~~Gi~~~~vIIDDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~n~ 313 (815)
+|.+.=++=+|.|.. -|+++|++.++.+++.+||+..+.||++|+...++ ..| ..+
T Consensus 6 pP~walG~~~sr~~y----~~~~ev~~~~~~~~~~~iP~d~i~lD~~~~~~~~~-------------------f~~-d~~ 61 (339)
T cd06603 6 PPLFSLGYHQCRWNY----KDQEDVKEVDAGFDEHDIPYDVIWLDIEHTDGKRY-------------------FTW-DKK 61 (339)
T ss_pred CchHHHHHHhcCCCC----CCHHHHHHHHHHHHHcCCCceEEEEChHHhCCCCc-------------------eEe-Ccc
Confidence 455665666676642 48999999999999999999999999999853322 123 246
Q ss_pred cccccccCCcCCCChHHHHHHHHhcCCCcEEEEEeecccccCCcCCCCcccccccccc---cccCCCCCCCCCCCcceec
Q 003500 314 KFQKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGVKPAADGMEHYDTAL---AYPVTSPGVMGNQPDIVMD 390 (815)
Q Consensus 314 KFp~~~~~~~~p~GLk~lv~~Ik~~~Glk~vgvWHal~GYWgGI~P~s~~~~~y~~~~---~~p~~spG~~~~~pd~a~d 390 (815)
||| ..+.+++++|+ .|+| +.+|..+. |.++. ....|+... .+.+...| .+ ....
T Consensus 62 ~FP----------dp~~mi~~L~~-~G~k-~~~~~~P~-----v~~~~-~~~~y~e~~~~g~~vk~~~g----~~-~~~~ 118 (339)
T cd06603 62 KFP----------DPEKMQEKLAS-KGRK-LVTIVDPH-----IKRDD-GYYVYKEAKDKGYLVKNSDG----GD-FEGW 118 (339)
T ss_pred cCC----------CHHHHHHHHHH-CCCE-EEEEecCc-----eecCC-CCHHHHHHHHCCeEEECCCC----CE-EEEE
Confidence 899 66999999999 6999 78887664 44431 111122211 11111111 01 1000
Q ss_pred cccccc----cCccCHHHHHHHHHHHHHHHH---hcCCCEEEEcccc
Q 003500 391 SLAVHG----LGLVHPKKVFNFYNELHAYLA---SCGVDGVKVDVQN 430 (815)
Q Consensus 391 ~~~~~g----lglv~p~~a~~fYd~l~~~La---s~GVD~VKvD~q~ 430 (815)
. ..| +++.+|+ |.++|.+.++.+. +.|||+++.|++-
T Consensus 119 ~--w~g~~~~~Dftnp~-a~~ww~~~~~~~~~~~~~g~~g~w~D~~E 162 (339)
T cd06603 119 C--WPGSSSWPDFLNPE-VRDWWASLFSYDKYKGSTENLYIWNDMNE 162 (339)
T ss_pred E--CCCCcCCccCCChh-HHHHHHHHHHHHhhcccCCCceEEeccCC
Confidence 0 122 3456665 5666666666554 4799999999864
No 34
>PLN02763 hydrolase, hydrolyzing O-glycosyl compounds
Probab=97.83 E-value=0.00078 Score=83.52 Aligned_cols=169 Identities=21% Similarity=0.324 Sum_probs=104.2
Q ss_pred EEeCCChHHHHHHHHHHHHHHhhcccccccccCCCcccccccccccccccccCHHHHHHHHHHHHhCCCCCcEEEEeccc
Q 003500 202 THAGPNPFEVISQAVKAVEKYMQTFTHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDGW 281 (815)
Q Consensus 202 v~~g~dp~~~i~~A~~~v~~~l~tf~~~~~K~~P~~~d~lGWCTWdaf~~~vte~~I~~~l~~L~~~Gi~~~~vIIDDGW 281 (815)
..-|.+|-++|++-..+ .+.. .-+|.|.=++=+|.|. | -|++.|++.++.+++.+||...+.+|..|
T Consensus 160 ~G~gptp~eVi~~Yt~L----TGrp-----~mpP~WALGy~qSR~~-Y---~sq~eV~eva~~fre~~IP~DvIwlDidY 226 (978)
T PLN02763 160 FGPFPSPEALLTSLSHA----IGTV-----FMPPKWALGYQQCRWS-Y---ESAKRVAEIARTFREKKIPCDVVWMDIDY 226 (978)
T ss_pred ecCCCCHHHHHHHHHHH----hCCC-----CCCchHHhheeeccCC-C---CCHHHHHHHHHHHHHcCCCceEEEEehhh
Confidence 33347777776665543 2322 2356676666678775 2 37899999999999999999999999999
Q ss_pred CcccCCCCcccchhhccccccccccCCCcc-CCcccccccCCcCCCChHHHHHHHHhcCCCcEEEEEeecccccCCcCCC
Q 003500 282 QQIENKPKEESNCIVQEGAQFASRLTGIKE-NSKFQKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGVKPA 360 (815)
Q Consensus 282 Q~~~~~~~~~~~~~~~~~~~~~~~L~~~~~-n~KFp~~~~~~~~p~GLk~lv~~Ik~~~Glk~vgvWHal~GYWgGI~P~ 360 (815)
+...+ .|.- ..+|| ..+.+++++|+ .|+|. ||..-. ||..+
T Consensus 227 m~g~~---------------------~FTwD~~rFP----------dP~~mv~~Lh~-~G~kv--v~iidP----gI~~d 268 (978)
T PLN02763 227 MDGFR---------------------CFTFDKERFP----------DPKGLADDLHS-IGFKA--IWMLDP----GIKAE 268 (978)
T ss_pred hcCCC---------------------ceeECcccCC----------CHHHHHHHHHH-CCCEE--EEEEcC----CCccC
Confidence 75322 2332 36898 56999999999 69994 443211 34433
Q ss_pred Cccccccccccc---ccCCCCCCCCCCCcceeccccccc----cCccCHHHHHHHHHHHHHHHHhcCCCEEEEcccc
Q 003500 361 ADGMEHYDTALA---YPVTSPGVMGNQPDIVMDSLAVHG----LGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQN 430 (815)
Q Consensus 361 s~~~~~y~~~~~---~p~~spG~~~~~pd~a~d~~~~~g----lglv~p~~a~~fYd~l~~~Las~GVD~VKvD~q~ 430 (815)
. ....|+.... +-+...|. | +.-. .+.| .++.+| ++++||.++++.|.+.|||+++.|++-
T Consensus 269 ~-gY~~y~eg~~~~~fvk~~~G~----~-y~G~--vWpG~~~fpDFTnP-~ar~WW~~~~k~l~d~GVDG~W~DmnE 336 (978)
T PLN02763 269 E-GYFVYDSGCENDVWIQTADGK----P-FVGE--VWPGPCVFPDFTNK-KTRSWWANLVKDFVSNGVDGIWNDMNE 336 (978)
T ss_pred C-CCHHHHhHhhcCeeEECCCCC----e-eEee--ecCCCccccCCCCH-HHHHHHHHHHHHHhcCCCcEEEccCCC
Confidence 1 1112221110 00000110 0 0000 0122 234555 478899999999999999999999964
No 35
>KOG1065 consensus Maltase glucoamylase and related hydrolases, glycosyl hydrolase family 31 [Carbohydrate transport and metabolism]
Probab=96.24 E-value=0.14 Score=62.29 Aligned_cols=175 Identities=21% Similarity=0.330 Sum_probs=108.5
Q ss_pred EEEEEeCCChHHHHHHHHHHHHHHhhcccccccccCCCcccccccccccccccccCHHHHHHHHHHHHhCCCCCcEEEEe
Q 003500 199 LVYTHAGPNPFEVISQAVKAVEKYMQTFTHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIID 278 (815)
Q Consensus 199 ~v~v~~g~dp~~~i~~A~~~v~~~l~tf~~~~~K~~P~~~d~lGWCTWdaf~~~vte~~I~~~l~~L~~~Gi~~~~vIID 278 (815)
-+++=.|..|-.++.|-.+.+- . .-..|-|-=++--|-|. -.+.+.+++-++.+.+.|+|..-+.+|
T Consensus 267 D~y~flGptPe~vvqQy~q~iG----~-----P~m~pYWslGf~~~Rwg----Y~nls~~~dvv~~~~~agiPld~~~~D 333 (805)
T KOG1065|consen 267 DFYVFLGPTPEGVVQQYLQLIG----R-----PAMPPYWSLGFQLCRWG----YKNLSVVRDVVENYRAAGIPLDVIVID 333 (805)
T ss_pred EEEEecCCChHHHHHHHHHHhC----C-----ccCCchhhccceecccc----cccHHHHHHHHHHHHHcCCCcceeeee
Confidence 4566668888888888777542 1 11244555555555553 468889999999999999999999999
Q ss_pred cccCcccCCCCcccchhhccccccccccCCCccC-CcccccccCCcCCCChHHHHHHHHhcCCCcEEEEEeecccccCCc
Q 003500 279 DGWQQIENKPKEESNCIVQEGAQFASRLTGIKEN-SKFQKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGV 357 (815)
Q Consensus 279 DGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~n-~KFp~~~~~~~~p~GLk~lv~~Ik~~~Glk~vgvWHal~GYWgGI 357 (815)
+-|++..+| |.-| .+|| +|+.+++.||+ .|+|+| +|.-+ +|
T Consensus 334 iDyMd~ykD---------------------FTvd~~~fp----------~~~~fv~~Lh~-~G~kyv-liidP-----~i 375 (805)
T KOG1065|consen 334 IDYMDGYKD---------------------FTVDKVWFP----------DLKDFVDDLHA-RGFKYV-LIIDP-----FI 375 (805)
T ss_pred hhhhhcccc---------------------eeeccccCc----------chHHHHHHHHh-CCCeEE-EEeCC-----cc
Confidence 999987655 4433 6787 59999999999 799976 44443 24
Q ss_pred CCCCccccccccccc---ccCCCCCCCCCCCcceeccccccc----cCccCHHHHHHHHHHHHHHHHhcCCCEEEEcccc
Q 003500 358 KPAADGMEHYDTALA---YPVTSPGVMGNQPDIVMDSLAVHG----LGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQN 430 (815)
Q Consensus 358 ~P~s~~~~~y~~~~~---~p~~spG~~~~~pd~a~d~~~~~g----lglv~p~~a~~fYd~l~~~Las~GVD~VKvD~q~ 430 (815)
+-++. ...|+.... .-..+-|. +++-.+. +.| .+.++|..+.-+-+++.++=...++|+++.|+.-
T Consensus 376 s~~~~-y~~y~~g~~~~v~I~~~~g~----~~~lg~v--wP~~~~fpDftnp~~~~Ww~~~~~~fh~~vp~dg~wiDmnE 448 (805)
T KOG1065|consen 376 STNSS-YGPYDRGVAKDVLIKNREGS----PKMLGEV--WPGSTAFPDFTNPAVVEWWLDELKRFHDEVPFDGFWIDMNE 448 (805)
T ss_pred ccCcc-chhhhhhhhhceeeecccCc----hhhhccc--CCCcccccccCCchHHHHHHHHHHhhcccCCccceEEECCC
Confidence 44433 111222211 10111111 1100000 122 2356785555444555555566899999999965
Q ss_pred c
Q 003500 431 I 431 (815)
Q Consensus 431 ~ 431 (815)
.
T Consensus 449 ~ 449 (805)
T KOG1065|consen 449 P 449 (805)
T ss_pred c
Confidence 4
No 36
>TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase. A sequence from Arabidopsis thaliana, GP|9294564, scores just above trusted, but appears either to contain corrupt sequence or, more likely, to be a pseudogene as some of the conserved catalytic residues common to the alpha amylase family are not conserved here.
Probab=91.56 E-value=5.7 Score=48.17 Aligned_cols=143 Identities=19% Similarity=0.218 Sum_probs=71.5
Q ss_pred cCHHHHHHHH-HHHHhCCCCCcEEEE-ecccCcccCCCCcccchhhccccccccccCC-CccCCcccccccCCcCCCChH
Q 003500 253 VTAEGVDEGL-KSLSAGGTPPKFLII-DDGWQQIENKPKEESNCIVQEGAQFASRLTG-IKENSKFQKKCQNSEQVSGLK 329 (815)
Q Consensus 253 vte~~I~~~l-~~L~~~Gi~~~~vII-DDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~-~~~n~KFp~~~~~~~~p~GLk 329 (815)
-|-.+|.+.+ +.|++.|+. .|.| --..+..... -|++. .+ +..+.+|.+ +..||
T Consensus 153 g~~~~i~~~l~dyl~~LGvt--~i~L~Pi~e~~~~~~----------wGY~~----~~y~~~~~~~Gt-------~~dlk 209 (613)
T TIGR01515 153 LSYRELADQLIPYVKELGFT--HIELLPVAEHPFDGS----------WGYQV----TGYYAPTSRFGT-------PDDFM 209 (613)
T ss_pred CCHHHHHHHHHHHHHHcCCC--EEEECCcccCCCCCC----------CCCCc----ccCcccccccCC-------HHHHH
Confidence 5678888886 999999998 4444 2221111000 01111 11 223456653 25899
Q ss_pred HHHHHHHhcCCCcEEEEEeecccccCCcCCCCcccccccccccccCCCCCCCCCCCcceeccccccccCccCHHHHHHHH
Q 003500 330 HVVDESKQNHNVKYVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHGLGLVHPKKVFNFY 409 (815)
Q Consensus 330 ~lv~~Ik~~~Glk~vgvWHal~GYWgGI~P~s~~~~~y~~~~~~p~~spG~~~~~pd~a~d~~~~~glglv~p~~a~~fY 409 (815)
.||+.+|+ .||+ |-+...+.- ..++......+...-.|....+ .....+.|.. .-+..-+| .+++|.
T Consensus 210 ~lV~~~H~-~Gi~-VilD~V~NH----~~~~~~~~~~~~~~~~y~~~~~-~~~~~~~w~~-----~~~~~~~~-~Vr~~l 276 (613)
T TIGR01515 210 YFVDACHQ-AGIG-VILDWVPGH----FPKDDHGLAEFDGTPLYEHKDP-RDGEHWDWGT-----LIFDYGRP-EVRNFL 276 (613)
T ss_pred HHHHHHHH-CCCE-EEEEecccC----cCCccchhhccCCCcceeccCC-ccCcCCCCCC-----ceecCCCH-HHHHHH
Confidence 99999999 6999 667644421 1122111111111100100000 0011122210 01223344 566666
Q ss_pred HHHHHHH-HhcCCCEEEEccccc
Q 003500 410 NELHAYL-ASCGVDGVKVDVQNI 431 (815)
Q Consensus 410 d~l~~~L-as~GVD~VKvD~q~~ 431 (815)
-+..+++ .+.||||+.+|+...
T Consensus 277 ~~~~~~W~~ey~iDG~R~D~v~~ 299 (613)
T TIGR01515 277 VANALYWAEFYHIDGLRVDAVAS 299 (613)
T ss_pred HHHHHHHHHHhCCcEEEEcCHHH
Confidence 6555555 678999999998543
No 37
>PF13200 DUF4015: Putative glycosyl hydrolase domain
Probab=90.35 E-value=7 Score=43.61 Aligned_cols=129 Identities=17% Similarity=0.281 Sum_probs=77.9
Q ss_pred CHHHHHHHHHHHHhCCCCCcEEEEec--ccCcccCCCCcccchhhccccccccccCCCccCCcccccccCCcCCCChHHH
Q 003500 254 TAEGVDEGLKSLSAGGTPPKFLIIDD--GWQQIENKPKEESNCIVQEGAQFASRLTGIKENSKFQKKCQNSEQVSGLKHV 331 (815)
Q Consensus 254 te~~I~~~l~~L~~~Gi~~~~vIIDD--GWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~n~KFp~~~~~~~~p~GLk~l 331 (815)
+++.+.+.++.+++.++. .++||= -+-.+.-+.+ ... .....+..++ ...++.+
T Consensus 11 ~~~~~~~~~~~i~~t~lN--avVIDvKdd~G~i~y~s~----------~~~---~~~~ga~~~~---------i~D~~~l 66 (316)
T PF13200_consen 11 SPERLDKLLDLIKRTELN--AVVIDVKDDDGNITYDSQ----------VPL---AREIGAVKPY---------IKDLKAL 66 (316)
T ss_pred CHHHHHHHHHHHHhcCCc--eEEEEEecCCceEEecCC----------Cch---hhhccccccc---------ccCHHHH
Confidence 567899999999999999 999972 1111111100 000 0011122222 2589999
Q ss_pred HHHHHhcCCCcEEEEEeecccccCCcCCCCcccccccccccccCCCCCCCCCCCcceecccc------ccccCccCH--H
Q 003500 332 VDESKQNHNVKYVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLA------VHGLGLVHP--K 403 (815)
Q Consensus 332 v~~Ik~~~Glk~vgvWHal~GYWgGI~P~s~~~~~y~~~~~~p~~spG~~~~~pd~a~d~~~------~~glglv~p--~ 403 (815)
++.+|+ +||. +=-|... ++... ....+|+|++.... ..|...+|| +
T Consensus 67 ~~~l~e-~gIY-~IARIv~----------------FkD~~--------la~~~pe~av~~~~G~~w~d~~~~~WvnP~~~ 120 (316)
T PF13200_consen 67 VKKLKE-HGIY-PIARIVV----------------FKDPV--------LAEAHPEWAVKTKDGSVWRDNEGEAWVNPYSK 120 (316)
T ss_pred HHHHHH-CCCE-EEEEEEE----------------ecChH--------HhhhChhhEEECCCCCcccCCCCCccCCCCCH
Confidence 999999 6876 2222222 11111 11235677663221 123445666 6
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEccccch
Q 003500 404 KVFNFYNELHAYLASCGVDGVKVDVQNII 432 (815)
Q Consensus 404 ~a~~fYd~l~~~Las~GVD~VKvD~q~~l 432 (815)
.+.+|--++.+.+++.|||-|-.|-.++=
T Consensus 121 evw~Y~i~IA~Eaa~~GFdEIqfDYIRFP 149 (316)
T PF13200_consen 121 EVWDYNIDIAKEAAKLGFDEIQFDYIRFP 149 (316)
T ss_pred HHHHHHHHHHHHHHHcCCCEEEeeeeecC
Confidence 78888889999999999999999998753
No 38
>cd06596 GH31_CPE1046 CPE1046 is an uncharacterized Clostridium perfringens protein with a glycosyl hydrolase family 31 (GH31) domain. The domain architecture of CPE1046 and its orthologs includes a C-terminal fibronectin type 3 (FN3) domain and a coagulation factor 5/8 type C domain in addition to the GH31 domain. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=75.36 E-value=39 Score=36.82 Aligned_cols=160 Identities=18% Similarity=0.202 Sum_probs=95.6
Q ss_pred CHHHHHHHHHHHHhCCCCCcEEEEecccCcccCCCCcccchhhccccccccccCCCccCCcccccccCCcCCCChHHHHH
Q 003500 254 TAEGVDEGLKSLSAGGTPPKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIKENSKFQKKCQNSEQVSGLKHVVD 333 (815)
Q Consensus 254 te~~I~~~l~~L~~~Gi~~~~vIIDDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~n~KFp~~~~~~~~p~GLk~lv~ 333 (815)
+...+.+.++..++..+|.+|+|-+||.+... ..|+.+++
T Consensus 43 ~~~~a~~~~~~y~~~~~plgw~lpndgyg~~y----------------------------------------~~l~~~~~ 82 (261)
T cd06596 43 TTDDARKVADKYKENDMPLGWMLPNDGYGCGY----------------------------------------ENLKEVVD 82 (261)
T ss_pred chhhHHHHHHHHHhcCCCceeeccCCCCcchH----------------------------------------HHHHHHHH
Confidence 34567888999999999999999999987431 15899999
Q ss_pred HHHhcCCCcEEEEEeecccccCCcCCCCcccccccccccccCCCCCCCCCCCcceeccccccccCccCHHHHHHHHHHHH
Q 003500 334 ESKQNHNVKYVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHGLGLVHPKKVFNFYNELH 413 (815)
Q Consensus 334 ~Ik~~~Glk~vgvWHal~GYWgGI~P~s~~~~~y~~~~~~p~~spG~~~~~pd~a~d~~~~~glglv~p~~a~~fYd~l~ 413 (815)
++++ .|++ .|+|- ...+ +++.
T Consensus 83 ~~~~-~g~~-~glwt-----------~~~l----------------------------------------------~~~~ 103 (261)
T cd06596 83 YLHA-NGVE-TGLWT-----------QSGL----------------------------------------------RDIA 103 (261)
T ss_pred HHHH-cCCc-ccccc-----------ccch----------------------------------------------hhhh
Confidence 9998 6998 67761 1111 1111
Q ss_pred HHHHhcCCCEEEEccccchhhccCCCCCchhHHHHHHHHHHHHHHhcCCCCcEEeeccCCCCCcccccccCeEEccCccC
Q 003500 414 AYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASIARNFPDNGCISCMCHNTDGIYSSKQTAVIRASDDYY 493 (815)
Q Consensus 414 ~~Las~GVD~VKvD~q~~l~~l~~~~~grv~l~~ay~~AL~~s~~~~f~g~~iI~cMs~~~~~l~~~~~~~~~R~SdDf~ 493 (815)
+.....|+.+.|+|+... +.++.=.....++.++++++ +-..|++|.+.|.+.-. .+++.+ =|.|..
T Consensus 104 ~ev~~~g~~~~k~Dv~w~----g~gy~~~l~~~ka~yeg~~~----~~~~RpfiltRsg~aGs---QRy~~~--WsGD~~ 170 (261)
T cd06596 104 KEVGAAGVRARKTDVAWV----GAGYSFALNGVKAAADGIES----NSNARPFIVTVDGWAGT---QRYAGI--WTGDQS 170 (261)
T ss_pred hhhccCCceEEeccchhh----ccchhHHHHHHHHHHHHHHh----CCCCCCEEEEecCcccc---CCCCCc--cCCCCc
Confidence 223567999999999763 22322223445666666653 22357888887765321 133332 356666
Q ss_pred CCCccchhhHHHHhhhhhhhccC-CCCCCCccccC
Q 003500 494 PRDPASHTIHISSVAYNTLFLGE-FMQPDWDMFHS 527 (815)
Q Consensus 494 p~~p~~~~~Hi~~na~nsl~~g~-~~~PDwDMf~s 527 (815)
..|..+. .+|.... +.-+.|. +.=+|.+=|.-
T Consensus 171 stWe~Lr-~sI~~~L-~~gLsG~p~~G~DIGGF~g 203 (261)
T cd06596 171 GSWEYIR-FHIPTYI-GSGLSGQPNTTSDVDGIFG 203 (261)
T ss_pred CcHHHHH-HHHHHHH-HHHhcCCCcCccccCcCCC
Confidence 6675532 3443322 2223343 34456555443
No 39
>PRK14705 glycogen branching enzyme; Provisional
Probab=72.76 E-value=67 Score=42.24 Aligned_cols=141 Identities=21% Similarity=0.317 Sum_probs=68.8
Q ss_pred cCCcccccccCCcCCCChHHHHHHHHhcCCCcEEEEEeecccccCCcCCCCcccccccccccccCCCCCCCCCCCcceec
Q 003500 311 ENSKFQKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMD 390 (815)
Q Consensus 311 ~n~KFp~~~~~~~~p~GLk~lv~~Ik~~~Glk~vgvWHal~GYWgGI~P~s~~~~~y~~~~~~p~~spG~~~~~pd~a~d 390 (815)
.+.+|-. |.+||.+|+.+|+ .||+-|-=|.- . -..++......++..-.|- +.....+.+++|...
T Consensus 807 p~~ryGt-------~~dfk~lVd~~H~-~GI~VILD~V~-n----H~~~d~~~l~~fdg~~~y~-~~d~~~g~~~~Wg~~ 872 (1224)
T PRK14705 807 PTSRFGH-------PDEFRFLVDSLHQ-AGIGVLLDWVP-A----HFPKDSWALAQFDGQPLYE-HADPALGEHPDWGTL 872 (1224)
T ss_pred cCcccCC-------HHHHHHHHHHHHH-CCCEEEEEecc-c----cCCcchhhhhhcCCCcccc-cCCcccCCCCCCCCc
Confidence 4566653 3699999999999 69883322210 0 0112211111111110110 000111344554210
Q ss_pred cccccccCccCHHHHHHHHHHHHH-HHHhcCCCEEEEccccchhhc----------cCCCCCchhH-HHHHHHHHHHHHH
Q 003500 391 SLAVHGLGLVHPKKVFNFYNELHA-YLASCGVDGVKVDVQNIIETL----------GAGHGGRVSL-TRSYHQALEASIA 458 (815)
Q Consensus 391 ~~~~~glglv~p~~a~~fYd~l~~-~Las~GVD~VKvD~q~~l~~l----------~~~~~grv~l-~~ay~~AL~~s~~ 458 (815)
-+.+-+| .++.|.-+-.. .+.+.+|||+-+|+-..+-++ ...++|+..+ +-.+.+-|...+.
T Consensus 873 -----~fn~~~~-eVr~fli~~a~~Wl~eyhiDGfR~Dav~~mly~Dysr~~g~w~pn~~gg~en~~ai~fl~~ln~~v~ 946 (1224)
T PRK14705 873 -----IFDFGRT-EVRNFLVANALYWLDEFHIDGLRVDAVASMLYLDYSREEGQWRPNRFGGRENLEAISFLQEVNATVY 946 (1224)
T ss_pred -----eecCCCH-HHHHHHHHHHHHHHHHhCCCcEEEeehhhhhhcccccccccccccccCCccChHHHHHHHHHHHHHH
Confidence 0223344 46666554444 567789999999996543221 1123443322 3445666666666
Q ss_pred hcCCCCcEEeecc
Q 003500 459 RNFPDNGCISCMC 471 (815)
Q Consensus 459 ~~f~g~~iI~cMs 471 (815)
+.+|+.-+|.=-+
T Consensus 947 ~~~p~~~~IAEes 959 (1224)
T PRK14705 947 KTHPGAVMIAEES 959 (1224)
T ss_pred HHCCCeEEEEEcC
Confidence 7777654555433
No 40
>KOG1066 consensus Glucosidase II catalytic (alpha) subunit and related enzymes, glycosyl hydrolase family 31 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones]
Probab=70.55 E-value=30 Score=42.25 Aligned_cols=103 Identities=20% Similarity=0.341 Sum_probs=69.4
Q ss_pred eEEEEEeCCChHHHHHHHHHHHHHHhhcccccccccCCCccccccc--ccccccccccCHHHHHHHHHHHHhCCCCCcEE
Q 003500 198 YLVYTHAGPNPFEVISQAVKAVEKYMQTFTHREKKKLPSFLDWFGW--CTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFL 275 (815)
Q Consensus 198 ~~v~v~~g~dp~~~i~~A~~~v~~~l~tf~~~~~K~~P~~~d~lGW--CTWdaf~~~vte~~I~~~l~~L~~~Gi~~~~v 275 (815)
--|++-.|.+|-+++++--++ .++ ..+|.++. +|| |-|| -.+|+.|++-=+.+-++.+|+..+
T Consensus 327 iDvFi~lGP~~~Dv~~qyaaL----TG~------~~LPplFs-iGYHQcRWN----Y~DE~DV~~Vd~~FDehdiP~Dvi 391 (915)
T KOG1066|consen 327 IDVFIFLGPKPSDVFRQYAAL----TGT------TPLPPLFS-IGYHQCRWN----YNDEEDVLTVDQGFDEHDIPYDVI 391 (915)
T ss_pred EEEEEEeCCChhHHHHHHHhh----cCC------CCCCchhh-cchhhcccc----ccchhhhhhhhcCccccCCccceE
Confidence 347788899987776654432 122 34666654 666 8887 357888988888999999997777
Q ss_pred EEecccCcccCCCCcccchhhccccccccccCCCccCCcccccccCCcCCCChHHHHHHHHhcCCCcEEEE
Q 003500 276 IIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIKENSKFQKKCQNSEQVSGLKHVVDESKQNHNVKYVYV 346 (815)
Q Consensus 276 IIDDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~n~KFp~~~~~~~~p~GLk~lv~~Ik~~~Glk~vgv 346 (815)
=+|--.-+..+ ...| +..|||.+ +.+++++.+ .|=|.|.+
T Consensus 392 WLDIEhtdgKr-------------------YFTW-Dk~~FP~P----------~~Ml~kLa~-kgRklV~I 431 (915)
T KOG1066|consen 392 WLDIEHTDGKR-------------------YFTW-DKHKFPNP----------KDMLKKLAS-KGRKLVTI 431 (915)
T ss_pred EEeeeecCCce-------------------eEee-ccccCCCH----------HHHHHHHHh-cCCceEEE
Confidence 66654432221 2123 34799964 788999998 48776655
No 41
>PRK14706 glycogen branching enzyme; Provisional
Probab=69.57 E-value=96 Score=38.12 Aligned_cols=69 Identities=23% Similarity=0.210 Sum_probs=41.3
Q ss_pred ccCHHHHHHHHHHHHHH-HHhcCCCEEEEccccchhhc--------cCCCCCch-hHHHHHHHHHHHHHHhcCCCCcEEe
Q 003500 399 LVHPKKVFNFYNELHAY-LASCGVDGVKVDVQNIIETL--------GAGHGGRV-SLTRSYHQALEASIARNFPDNGCIS 468 (815)
Q Consensus 399 lv~p~~a~~fYd~l~~~-Las~GVD~VKvD~q~~l~~l--------~~~~~grv-~l~~ay~~AL~~s~~~~f~g~~iI~ 468 (815)
+-+| .+++|.-+-..| +.+.+|||+-+|+...+..+ ...++++. ..+-.+-+.|...+.+.+|+.-+|.
T Consensus 278 ~~~~-eVr~~l~~~~~~W~~e~~iDG~R~Dav~~~ly~d~~~~~~~~~~~gg~~n~~a~~fl~~ln~~v~~~~p~~~~iA 356 (639)
T PRK14706 278 YGRN-EVVMFLIGSALKWLQDFHVDGLRVDAVASMLYLDFSRTEWVPNIHGGRENLEAIAFLKRLNEVTHHMAPGCMMIA 356 (639)
T ss_pred CCCH-HHHHHHHHHHHHHHHHhCCCeEEEeeehheeecccCcccccccccCCcccHHHHHHHHHHHHHHHHhCCCeEEEE
Confidence 3345 466666555555 57899999999985543221 11233433 2355577777777777777654555
No 42
>PRK12568 glycogen branching enzyme; Provisional
Probab=69.13 E-value=51 Score=40.97 Aligned_cols=73 Identities=22% Similarity=0.330 Sum_probs=42.4
Q ss_pred CccCHHHHHHHHHHHHHHHHhcCCCEEEEccccchhhc----------cCCCCCchhH-HHHHHHHHHHHHHhcCCCCcE
Q 003500 398 GLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETL----------GAGHGGRVSL-TRSYHQALEASIARNFPDNGC 466 (815)
Q Consensus 398 glv~p~~a~~fYd~l~~~Las~GVD~VKvD~q~~l~~l----------~~~~~grv~l-~~ay~~AL~~s~~~~f~g~~i 466 (815)
.+-+|+..+.+.+.+.-.+.+.||||+-+|+-..+-.+ ...++++..+ +..+-+.|...+.+.+|+.-+
T Consensus 379 N~~~peVr~~li~~a~~Wl~eyhIDG~R~DAva~mly~d~~r~~g~w~pn~~gg~en~ea~~Fl~~ln~~v~~~~P~~~~ 458 (730)
T PRK12568 379 NYGRPEVTAYLLGSALEWIEHYHLDGLRVDAVASMLYRDYGRAEGEWVPNAHGGRENLEAVAFLRQLNREIASQFPGVLT 458 (730)
T ss_pred ccCCHHHHHHHHHHHHHHHHHhCceEEEEcCHhHhhhhccccccccccccccCCccChHHHHHHHHHHHHHHHHCCCeEE
Confidence 34456544444555555567899999999975433211 1112333222 345666777777778886655
Q ss_pred Eeec
Q 003500 467 ISCM 470 (815)
Q Consensus 467 I~cM 470 (815)
|.=.
T Consensus 459 IAEe 462 (730)
T PRK12568 459 IAEE 462 (730)
T ss_pred EEEc
Confidence 5544
No 43
>PRK10785 maltodextrin glucosidase; Provisional
Probab=69.00 E-value=65 Score=39.13 Aligned_cols=64 Identities=13% Similarity=0.177 Sum_probs=38.2
Q ss_pred CHHHHHHHHHHHHhCCCCCcEEEEecccCcccCCCCcccchhhccccccccccCCCc-cCCcccccccCCcCCCChHHHH
Q 003500 254 TAEGVDEGLKSLSAGGTPPKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIK-ENSKFQKKCQNSEQVSGLKHVV 332 (815)
Q Consensus 254 te~~I~~~l~~L~~~Gi~~~~vIIDDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~-~n~KFp~~~~~~~~p~GLk~lv 332 (815)
+=++|.+.|+.|++.|+. .|-| .+-.... . ..|+. -.++. -+..|.+. ..|+.||
T Consensus 177 Dl~GI~~kLdYL~~LGv~--~I~L-----~Pif~s~---s---~hgYd----~~Dy~~iDp~~Gt~-------~df~~Lv 232 (598)
T PRK10785 177 DLDGISEKLPYLKKLGVT--ALYL-----NPIFTAP---S---VHKYD----TEDYRHVDPQLGGD-------AALLRLR 232 (598)
T ss_pred CHHHHHHHHHHHHHcCCC--EEEe-----CCcccCC---C---CCCcC----cccccccCcccCCH-------HHHHHHH
Confidence 568999999999999998 3322 1111110 0 00111 12222 23455422 5899999
Q ss_pred HHHHhcCCCc
Q 003500 333 DESKQNHNVK 342 (815)
Q Consensus 333 ~~Ik~~~Glk 342 (815)
+++|+ .|||
T Consensus 233 ~~aH~-rGik 241 (598)
T PRK10785 233 HATQQ-RGMR 241 (598)
T ss_pred HHHHH-CCCE
Confidence 99999 5999
No 44
>PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function.
Probab=68.64 E-value=1.2e+02 Score=33.78 Aligned_cols=141 Identities=17% Similarity=0.264 Sum_probs=71.7
Q ss_pred CHHHHHHHHHHHHhCCCCCcEEEEecccCcccCCCCcccchhhccccccccccCCCccCCcccccc---cCCcCCCChHH
Q 003500 254 TAEGVDEGLKSLSAGGTPPKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIKENSKFQKKC---QNSEQVSGLKH 330 (815)
Q Consensus 254 te~~I~~~l~~L~~~Gi~~~~vIIDDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~n~KFp~~~---~~~~~p~GLk~ 330 (815)
+++++.+.++.|++.|+. .|+++=-+. ++ +. +.+ ++.+-.++..+. .|. -.=|+.
T Consensus 17 ~~~~~~~~l~~l~~~~~N--~V~~qVr~~---gd----a~--------Y~S---~~~p~s~~~~g~~~~~pg--~DpL~~ 74 (311)
T PF02638_consen 17 SKEQIDEMLDDLKSAGFN--AVFVQVRPR---GD----AL--------YPS---DIEPWSGYLTGKQGKDPG--FDPLEF 74 (311)
T ss_pred CHHHHHHHHHHHHHcCCC--EEEEEEEeC---cE----EE--------ecc---cccccccccCCCCCCCCC--ccHHHH
Confidence 899999999999999988 666643332 11 00 000 011111111000 010 024899
Q ss_pred HHHHHHhcCCCcEEEEEeecccccCCcCCCCcccccccccccccCCCCCCCCCCCcceecccc-ccccCccCH--HHHHH
Q 003500 331 VVDESKQNHNVKYVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLA-VHGLGLVHP--KKVFN 407 (815)
Q Consensus 331 lv~~Ik~~~Glk~vgvWHal~GYWgGI~P~s~~~~~y~~~~~~p~~spG~~~~~pd~a~d~~~-~~glglv~p--~~a~~ 407 (815)
++++.|+ .||+ |.-|..+. .- -.+.+...+.. | .....+++++...... .++...+|| +.+++
T Consensus 75 ~I~eaHk-rGle-vHAW~~~~-~~--~~~~~~~~~~~------p---~~~~~~~~~~~~~~~~~~~~~~~lnP~~PeVr~ 140 (311)
T PF02638_consen 75 MIEEAHK-RGLE-VHAWFRVG-FN--APDVSHILKKH------P---EWFAVNHPGWVRTYEDANGGYYWLNPGHPEVRD 140 (311)
T ss_pred HHHHHHH-cCCE-EEEEEEee-cC--CCchhhhhhcC------c---hhheecCCCceeecccCCCCceEECCCCHHHHH
Confidence 9999999 6999 77787321 00 00111111111 1 0111133443322111 122224454 46788
Q ss_pred HHHHHHHH-HHhcCCCEEEEcccc
Q 003500 408 FYNELHAY-LASCGVDGVKVDVQN 430 (815)
Q Consensus 408 fYd~l~~~-Las~GVD~VKvD~q~ 430 (815)
|.-++..- +....||||-.|...
T Consensus 141 ~i~~~v~Eiv~~YdvDGIhlDdy~ 164 (311)
T PF02638_consen 141 YIIDIVKEIVKNYDVDGIHLDDYF 164 (311)
T ss_pred HHHHHHHHHHhcCCCCeEEecccc
Confidence 87666665 467899999999644
No 45
>cd02932 OYE_YqiM_FMN Old yellow enzyme (OYE) YqjM-like FMN binding domain. YqjM is involved in the oxidative stress response of Bacillus subtilis. Like the other OYE members, each monomer of YqjM contains FMN as a non-covalently bound cofactor and uses NADPH as a reducing agent. The YqjM enzyme exists as a homotetramer that is assembled as a dimer of catalytically dependent dimers, while other OYE members exist only as monomers or dimers. Moreover, the protein displays a shared active site architecture where an arginine finger at the COOH terminus of one monomer extends into the active site of the adjacent monomer and is directly involved in substrate recognition. Another remarkable difference in the binding of the ligand in YqjM is represented by the contribution of the NH2-terminal tyrosine instead of a COOH-terminal tyrosine in OYE and its homologs.
Probab=64.06 E-value=71 Score=35.71 Aligned_cols=73 Identities=21% Similarity=0.171 Sum_probs=42.0
Q ss_pred ccCHHHHHHHHHHHHhCCCCCcEEEEecccCcccCCCCcccchhhccccccccccCCCccCCcccccccCCcCCCChHHH
Q 003500 252 DVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIKENSKFQKKCQNSEQVSGLKHV 331 (815)
Q Consensus 252 ~vte~~I~~~l~~L~~~Gi~~~~vIIDDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~n~KFp~~~~~~~~p~GLk~l 331 (815)
.+|+ ...+..+..+++|+- ++|+-...-+..... +...+. +..+... .+|+.+
T Consensus 30 ~~~~-~~~~~y~~rA~gg~g--lii~~~~~v~~~~~~-------------~~~~~~-~~~d~~~----------~~~~~l 82 (336)
T cd02932 30 VATD-WHLVHYGSRALGGAG--LVIVEATAVSPEGRI-------------TPGDLG-LWNDEQI----------EALKRI 82 (336)
T ss_pred CCCH-HHHHHHHHHHcCCCc--EEEEcceEECCCcCC-------------CCCcee-ecCHHHH----------HHHHHH
Confidence 3554 566777778888876 776655443222110 001111 1112222 499999
Q ss_pred HHHHHhcCCCc-EEEEEeeccccc
Q 003500 332 VDESKQNHNVK-YVYVWHALAGYW 354 (815)
Q Consensus 332 v~~Ik~~~Glk-~vgvWHal~GYW 354 (815)
++.+|+ +|-+ .+=+||+ |.+
T Consensus 83 ~~~vh~-~G~~~~~QL~H~--G~~ 103 (336)
T cd02932 83 VDFIHS-QGAKIGIQLAHA--GRK 103 (336)
T ss_pred HHHHHh-cCCcEEEEccCC--CcC
Confidence 999999 7865 5667884 544
No 46
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase. Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1-4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system.
Probab=64.06 E-value=1.6e+02 Score=35.50 Aligned_cols=28 Identities=18% Similarity=0.371 Sum_probs=19.7
Q ss_pred HHHHHH-HHHHHHHHhcCCCEEEEccccc
Q 003500 404 KVFNFY-NELHAYLASCGVDGVKVDVQNI 431 (815)
Q Consensus 404 ~a~~fY-d~l~~~Las~GVD~VKvD~q~~ 431 (815)
.+++|. +.+...+.+.||||+-+|+...
T Consensus 220 ~vr~~i~~~~~~W~~e~~iDGfR~D~~~~ 248 (542)
T TIGR02402 220 EVRRYILDNALYWLREYHFDGLRLDAVHA 248 (542)
T ss_pred HHHHHHHHHHHHHHHHhCCcEEEEeCHHH
Confidence 566665 4454455679999999998554
No 47
>PF00724 Oxidored_FMN: NADH:flavin oxidoreductase / NADH oxidase family; InterPro: IPR001155 The TIM-barrel fold is a closed barrel structure composed of an eight-fold repeat of beta-alpha units, where the eight parallel beta strands on the inside are covered by the eight alpha helices on the outside []. It is a widely distributed fold which has been found in many enzyme families that catalyse completely unrelated reactions []. The active site is always found at the C-terminal end of this domain. Proteins in this entry are a variety of NADH:flavin oxidoreductase/NADH oxidase enzymes, found mostly in bacteria or fungi, that contain a TIM-barrel fold. They commonly use FMN/FAD as cofactor and include: dimethylamine dehydrogenase trimethylamine dehydrogenase 12-oxophytodienoate reductase NADPH dehydrogenase NADH oxidase ; GO: 0010181 FMN binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3GKA_B 3P67_A 3F03_K 2ABA_A 1VYR_A 1GVO_A 3KFT_B 3P8I_A 1GVQ_A 3P74_A ....
Probab=63.39 E-value=1.1e+02 Score=34.38 Aligned_cols=163 Identities=18% Similarity=0.320 Sum_probs=80.1
Q ss_pred cCHHHHHHHHHHHHhCCCCCcEEEEecccCcccCCCCcccchhhccccccccccCCCccCCcccccccCCcCCCChHHHH
Q 003500 253 VTAEGVDEGLKSLSAGGTPPKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIKENSKFQKKCQNSEQVSGLKHVV 332 (815)
Q Consensus 253 vte~~I~~~l~~L~~~Gi~~~~vIIDDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~n~KFp~~~~~~~~p~GLk~lv 332 (815)
++++...+.....+++|+- .+|+...-=+.... .+...+. +..++.. .|+|.++
T Consensus 33 ~~~~~~~~yy~~rA~GG~G--lii~~~~~v~~~~~-------------~~~~~~~-i~~d~~i----------~~~k~l~ 86 (341)
T PF00724_consen 33 VPTDRLIAYYERRAKGGAG--LIITEATAVSPEGR-------------GFPGQPG-IWDDEQI----------PGLKKLA 86 (341)
T ss_dssp BCHHHHHHHHHHHHHTTTS--EEEEEEEESSGGGS-------------SSTTSEB-SSSHHHH----------HHHHHHH
T ss_pred CcHHHHHHHHHHHhhcCCc--eEEecccccccccc-------------cccccch-hchhhHH----------HHHHHHH
Confidence 7888999999999999975 77775432211111 0111111 1111222 4999999
Q ss_pred HHHHhcCCCc-EEEEEeecccccCCcCCCCcccccccccccccCCCCCCCCCCCcceeccccccc--cCccCHHHHHHHH
Q 003500 333 DESKQNHNVK-YVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHG--LGLVHPKKVFNFY 409 (815)
Q Consensus 333 ~~Ik~~~Glk-~vgvWHal~GYWgGI~P~s~~~~~y~~~~~~p~~spG~~~~~pd~a~d~~~~~g--lglv~p~~a~~fY 409 (815)
+.||+ +|-| .+=+||+ |.+.. +.... ... +-|...... ..... ..+ .--++.+++++.-
T Consensus 87 ~~vh~-~Ga~i~~QL~H~--G~~~~--~~~~~---~~~--~~psa~~~~-~~~~~-------~~~~~~~~mt~~eI~~ii 148 (341)
T PF00724_consen 87 DAVHA-HGAKIIAQLWHA--GRQAN--PEYSG---DPP--VGPSAPSAL-PSPIK-------FMGYPPREMTEEEIEEII 148 (341)
T ss_dssp HHHHH-TTSEEEEEEE----GGGSS--GCCSG---GGC--EESSCSSSS-STTTT-------ETSCEEEE--HHHHHHHH
T ss_pred HHHHh-cCccceeecccc--ccccC--cccCC---CCc--cCccccccc-Ccccc-------cCCCCCeeCCHHHHHHHH
Confidence 99999 7965 3446886 44422 21111 000 011100000 00000 000 0012456677766
Q ss_pred HHHH---HHHHhcCCCEEEEccccc--hhh-c-------cCCCCC----chhHHHHHHHHHHHHHHh
Q 003500 410 NELH---AYLASCGVDGVKVDVQNI--IET-L-------GAGHGG----RVSLTRSYHQALEASIAR 459 (815)
Q Consensus 410 d~l~---~~Las~GVD~VKvD~q~~--l~~-l-------~~~~~g----rv~l~~ay~~AL~~s~~~ 459 (815)
++|- +...++|+|+|.+-+.+- +.. + ...+|| |.++....-+|+.+.+-+
T Consensus 149 ~~f~~AA~~A~~AGfDGVEIH~ahGyLl~qFLSp~~N~RtDeYGGs~ENR~Rf~~Eii~aIr~~vg~ 215 (341)
T PF00724_consen 149 EDFAQAARRAKEAGFDGVEIHAAHGYLLSQFLSPLTNRRTDEYGGSLENRARFLLEIIEAIREAVGP 215 (341)
T ss_dssp HHHHHHHHHHHHTT-SEEEEEESTTSHHHHHHSTTT---SSTTSSSHHHHHHHHHHHHHHHHHHHTG
T ss_pred HHHHHHHHHHHHhccCeEeecccchhhhhheeeeccCCCchhhhhhhchhhHHHHHHHHHHHHHhcC
Confidence 6664 356779999999998651 111 1 123454 455666666666655533
No 48
>PRK05402 glycogen branching enzyme; Provisional
Probab=60.18 E-value=2.7e+02 Score=34.78 Aligned_cols=33 Identities=15% Similarity=0.161 Sum_probs=21.1
Q ss_pred CccCHHHHHHHHHHHHHHHHhcCCCEEEEcccc
Q 003500 398 GLVHPKKVFNFYNELHAYLASCGVDGVKVDVQN 430 (815)
Q Consensus 398 glv~p~~a~~fYd~l~~~Las~GVD~VKvD~q~ 430 (815)
.+-+|+..+.+.+.+.-.+.+.||||+-+|+..
T Consensus 375 n~~~~~v~~~l~~~~~~W~~e~~iDG~R~D~v~ 407 (726)
T PRK05402 375 NYGRNEVRNFLVANALYWLEEFHIDGLRVDAVA 407 (726)
T ss_pred cCCCHHHHHHHHHHHHHHHHHhCCcEEEECCHH
Confidence 344565444444555545567899999999743
No 49
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=58.20 E-value=60 Score=39.65 Aligned_cols=141 Identities=21% Similarity=0.287 Sum_probs=79.0
Q ss_pred CHHHHHHHHHHHHhCCCC-CcEEEE-----ecccCcccCCCCcccchhhccccccccccCCCccCCcccccccCCcCCCC
Q 003500 254 TAEGVDEGLKSLSAGGTP-PKFLII-----DDGWQQIENKPKEESNCIVQEGAQFASRLTGIKENSKFQKKCQNSEQVSG 327 (815)
Q Consensus 254 te~~I~~~l~~L~~~Gi~-~~~vII-----DDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~n~KFp~~~~~~~~p~G 327 (815)
+-+...+-+..|++.|+. ++++=| |=+| |+|-. +=+-+.++|-+ |.+
T Consensus 163 ~~e~a~~llpYl~elG~T~IELMPv~e~p~~~sW-----------------GYq~~---g~yAp~sryGt-------Ped 215 (628)
T COG0296 163 YFELAIELLPYLKELGITHIELMPVAEHPGDRSW-----------------GYQGT---GYYAPTSRYGT-------PED 215 (628)
T ss_pred HHHHHHHHhHHHHHhCCCEEEEcccccCCCCCCC-----------------CCCcc---eeccccccCCC-------HHH
Confidence 556788889999999987 232222 1112 11111 11223466653 479
Q ss_pred hHHHHHHHHhcCCCcEEEEEeecccccCCcCCCCcccccccccccccCCCCCCCCCCCcceeccccccccCccCHHHHHH
Q 003500 328 LKHVVDESKQNHNVKYVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHGLGLVHPKKVFN 407 (815)
Q Consensus 328 Lk~lv~~Ik~~~Glk~vgvWHal~GYWgGI~P~s~~~~~y~~~~~~p~~spG~~~~~pd~a~d~~~~~glglv~p~~a~~ 407 (815)
||++|+..|+ +||--|-=|. .+ =..|++.....|.....+.-..|. .+.+++|-. .+.-.....|+.
T Consensus 216 fk~fVD~aH~-~GIgViLD~V--~~---HF~~d~~~L~~fdg~~~~e~~~~~-~~~~~~Wg~------~i~~~gr~EVR~ 282 (628)
T COG0296 216 FKALVDAAHQ-AGIGVILDWV--PN---HFPPDGNYLARFDGTFLYEHEDPR-RGEHTDWGT------AIFNYGRNEVRN 282 (628)
T ss_pred HHHHHHHHHH-cCCEEEEEec--CC---cCCCCcchhhhcCCccccccCCcc-cccCCCccc------chhccCcHHHHH
Confidence 9999999999 7865221121 11 123555555566655443222222 344566531 111121345666
Q ss_pred HH-HHHHHHHHhcCCCEEEEccccchhh
Q 003500 408 FY-NELHAYLASCGVDGVKVDVQNIIET 434 (815)
Q Consensus 408 fY-d~l~~~Las~GVD~VKvD~q~~l~~ 434 (815)
|+ ....-.|.+..|||+-+|+...+..
T Consensus 283 Fll~nal~Wl~~yHiDGlRvDAV~smly 310 (628)
T COG0296 283 FLLANALYWLEEYHIDGLRVDAVASMLY 310 (628)
T ss_pred HHHHHHHHHHHHhCCcceeeehhhhhhc
Confidence 64 5666678999999999999876543
No 50
>PRK10933 trehalose-6-phosphate hydrolase; Provisional
Probab=56.24 E-value=1.4e+02 Score=35.86 Aligned_cols=34 Identities=32% Similarity=0.534 Sum_probs=25.8
Q ss_pred ccCHHHHHHHHHHHHHHHHhcCCCEEEEccccchh
Q 003500 399 LVHPKKVFNFYNELHAYLASCGVDGVKVDVQNIIE 433 (815)
Q Consensus 399 lv~p~~a~~fYd~l~~~Las~GVD~VKvD~q~~l~ 433 (815)
.-+| .++++..+..+++.+.||||+-+|+...+.
T Consensus 173 ~~np-~V~~~l~~~~~~W~~~GvDGfRlDa~~~i~ 206 (551)
T PRK10933 173 WENP-AVRAELKKVCEFWADRGVDGLRLDVVNLIS 206 (551)
T ss_pred CCCH-HHHHHHHHHHHHHHHCCCcEEEEcchhhcC
Confidence 3455 466677778888889999999999876553
No 51
>cd02871 GH18_chitinase_D-like GH18 domain of Chitinase D (ChiD). ChiD, a chitinase found in Bacillus circulans, hydrolyzes the 1,4-beta-linkages of N-acetylglucosamine in chitin and chitodextrins. The domain architecture of ChiD includes a catalytic glycosyl hydrolase family 18 (GH18) domain, a chitin-binding domain, and a fibronectin type III domain. The chitin-binding and fibronectin type III domains are located either N-terminal or C-terminal to the catalytic domain. This family includes exochitinase Chi36 from Bacillus cereus.
Probab=54.76 E-value=1.1e+02 Score=33.95 Aligned_cols=64 Identities=17% Similarity=0.266 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHHHHHhcCCCEEEEccccchhhccCCCCCchhHHHHHHHHHHHHHHhcCCCCcEEeeccC
Q 003500 402 PKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASIARNFPDNGCISCMCH 472 (815)
Q Consensus 402 p~~a~~fYd~l~~~Las~GVD~VKvD~q~~l~~l~~~~~grv~l~~ay~~AL~~s~~~~f~g~~iI~cMs~ 472 (815)
+.....|.+.+.+++.++|+|||=+|+.... ...+.......+.++|++ +++.++ ...+.++++
T Consensus 92 ~~~~~~fa~sl~~~~~~~g~DGiDiD~E~~~-----~~~~~~~~~~~~~~~lk~-lr~~~~-~~~~lT~AP 155 (312)
T cd02871 92 TAQEDNFVDSIVAIIKEYGFDGLDIDLESGS-----NPLNATPVITNLISALKQ-LKDHYG-PNFILTMAP 155 (312)
T ss_pred HHHHHHHHHHHHHHHHHhCCCeEEEecccCC-----ccCCcHHHHHHHHHHHHH-HHHHcC-CCeEEEECC
Confidence 5678899999999999999999999996531 111112234455555553 455554 367777774
No 52
>PRK12313 glycogen branching enzyme; Provisional
Probab=53.57 E-value=4e+02 Score=32.62 Aligned_cols=32 Identities=25% Similarity=0.385 Sum_probs=20.9
Q ss_pred CccCHHHHHHHH-HHHHHHHHhcCCCEEEEcccc
Q 003500 398 GLVHPKKVFNFY-NELHAYLASCGVDGVKVDVQN 430 (815)
Q Consensus 398 glv~p~~a~~fY-d~l~~~Las~GVD~VKvD~q~ 430 (815)
.+-+|+ +++|. +.+.-.+.+.||||+-+|+..
T Consensus 280 n~~~~~-vr~~l~~~~~~W~~~~~iDG~R~D~~~ 312 (633)
T PRK12313 280 DLGKNE-VRSFLISSALFWLDEYHLDGLRVDAVS 312 (633)
T ss_pred CCCCHH-HHHHHHHHHHHHHHHhCCcEEEEcChh
Confidence 344565 55554 544444567899999999654
No 53
>cd04734 OYE_like_3_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 3. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Other members of OYE family include trimethylamine dehydrogenase, 2,4-dienoyl-CoA reductase, enoate reductase, pentaerythriol tetranitrate reductase, xenobiotic reductase, and morphinone reductase. One member of this subgroup, the Sinorhizobium meliloti stachydrine utilization protein stcD, has been idenified as a putative N-methylproline demethylase.
Probab=53.24 E-value=1.6e+02 Score=33.25 Aligned_cols=73 Identities=12% Similarity=0.196 Sum_probs=41.9
Q ss_pred ccCHHHHHHHHHHHHhCCCCCcEEEEecccCcccCCCCcccchhhccccccccccCCCccCCcccccccCCcCCCChHHH
Q 003500 252 DVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIKENSKFQKKCQNSEQVSGLKHV 331 (815)
Q Consensus 252 ~vte~~I~~~l~~L~~~Gi~~~~vIIDDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~n~KFp~~~~~~~~p~GLk~l 331 (815)
.+|+ ..++.-+..+++|+- .+|.....-+..... +.+.++ +. ++++- .+|+.+
T Consensus 30 ~~t~-~~~~~y~~~A~gG~G--lIi~e~~~v~~~~~~-------------~~~~~~-l~-~d~~i---------~~~~~l 82 (343)
T cd04734 30 LPSE-RYIAYHEERARGGAG--LIITEGSSVHPSDSP-------------AFGNLN-AS-DDEII---------PGFRRL 82 (343)
T ss_pred CCCH-HHHHHHHHHHhCCCC--EEEEeeeeeCCcccC-------------CCCccc-cC-CHHHH---------HHHHHH
Confidence 4565 455667778888876 777765553322111 001111 11 12222 499999
Q ss_pred HHHHHhcCCCc-EEEEEeeccccc
Q 003500 332 VDESKQNHNVK-YVYVWHALAGYW 354 (815)
Q Consensus 332 v~~Ik~~~Glk-~vgvWHal~GYW 354 (815)
++.+|+ +|-+ .+=+||+ |++
T Consensus 83 ~~~vh~-~g~~~~~Ql~H~--G~~ 103 (343)
T cd04734 83 AEAVHA-HGAVIMIQLTHL--GRR 103 (343)
T ss_pred HHHHHh-cCCeEEEeccCC--CcC
Confidence 999999 7844 4667885 555
No 54
>PRK14582 pgaB outer membrane N-deacetylase; Provisional
Probab=49.58 E-value=2.3e+02 Score=35.17 Aligned_cols=140 Identities=14% Similarity=0.203 Sum_probs=78.8
Q ss_pred cCHHHHHHHHHHHHhCCCCCcEEEEecccCcccCCCCcccchhhccccccccccCCCccCCcccccccCCcCCCChHHHH
Q 003500 253 VTAEGVDEGLKSLSAGGTPPKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIKENSKFQKKCQNSEQVSGLKHVV 332 (815)
Q Consensus 253 vte~~I~~~l~~L~~~Gi~~~~vIIDDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~n~KFp~~~~~~~~p~GLk~lv 332 (815)
.+++.+.+.++.+++.|+.--||.. .++.++++. ...+ +.+|.--| - --.++-++.
T Consensus 331 qq~~~L~~lLdrlk~~G~ntV~lqa---fadp~gd~~-------------~~s~--yfP~~~lp-----~-r~d~f~~~a 386 (671)
T PRK14582 331 QQDRNIDVLIQRVKDMQISTVYLQA---FADPDGDGL-------------VKEL--YFPNRLLP-----M-RADLFNRVA 386 (671)
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEEe---ccCCCCCcc-------------cccc--ccCccccc-----c-ccCCcCHHH
Confidence 4567788889999999999556655 011112211 0000 11221122 1 124888888
Q ss_pred HHHHhcCCCcEEEEEeecccccCCcCCCCcccccccccccccCCCCCCCCCCCcceeccccccccCccCHHHHHHHHHHH
Q 003500 333 DESKQNHNVKYVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHGLGLVHPKKVFNFYNEL 412 (815)
Q Consensus 333 ~~Ik~~~Glk~vgvWHal~GYWgGI~P~s~~~~~y~~~~~~p~~spG~~~~~pd~a~d~~~~~glglv~p~~a~~fYd~l 412 (815)
=.|+.+.|+| |+-|..+.. |. +.+..+..+.++ +...|. ..+|+|. .++.--+| .++++..++
T Consensus 387 w~l~~r~~v~-v~AWmp~~~-~~-~~~~~~~~~~~~-----~~~~~~--~~~~~~~------~rl~P~~p-e~r~~i~~i 449 (671)
T PRK14582 387 WQLRTRAGVN-VYAWMPVLS-FD-LDPTLPRVKRLD-----TGEGKA--QIHPEQY------RRLSPFDD-RVRAQVGML 449 (671)
T ss_pred HHHHHhhCCE-EEEecccee-ec-cCCCcchhhhcc-----ccCCcc--ccCCCCC------cCCCCCCH-HHHHHHHHH
Confidence 8887778998 999988754 21 112211111111 111111 2345541 22333344 588889999
Q ss_pred HHHHHh-cCCCEEEEccccchh
Q 003500 413 HAYLAS-CGVDGVKVDVQNIIE 433 (815)
Q Consensus 413 ~~~Las-~GVD~VKvD~q~~l~ 433 (815)
+.-|+. +.||||-.|.-..+.
T Consensus 450 ~~dla~~~~~dGilf~Dd~~l~ 471 (671)
T PRK14582 450 YEDLAGHAAFDGILFHDDAVLS 471 (671)
T ss_pred HHHHHHhCCCceEEeccccccc
Confidence 998888 599999999977654
No 55
>PLN02447 1,4-alpha-glucan-branching enzyme
Probab=43.69 E-value=5.8e+02 Score=32.20 Aligned_cols=69 Identities=13% Similarity=0.071 Sum_probs=41.2
Q ss_pred ccCHHHHHHHHHHHHHHH-HhcCCCEEEEccccchhhcc------------CCCCCch-hHHHHHHHHHHHHHHhcCCCC
Q 003500 399 LVHPKKVFNFYNELHAYL-ASCGVDGVKVDVQNIIETLG------------AGHGGRV-SLTRSYHQALEASIARNFPDN 464 (815)
Q Consensus 399 lv~p~~a~~fYd~l~~~L-as~GVD~VKvD~q~~l~~l~------------~~~~grv-~l~~ay~~AL~~s~~~~f~g~ 464 (815)
+-+++ +++|.-+..+|+ .+.+|||+.+|+...+-++. ...++.+ ..+-.|-+-+...+.+.+|+.
T Consensus 362 ~~~~e-Vr~fLl~~~~~Wl~ey~IDGfRfDaV~smlY~~hg~~~~f~~~~~~~~g~~~d~~a~~fL~~~N~~i~~~~p~~ 440 (758)
T PLN02447 362 YGNWE-VLRFLLSNLRWWLEEYKFDGFRFDGVTSMLYHHHGLQMAFTGNYNEYFGMATDVDAVVYLMLANDLLHGLYPEA 440 (758)
T ss_pred CCCHH-HHHHHHHHHHHHHHHhCcccccccchhhhhccccCcccccccCcccccCCccChHHHHHHHHHHHHHHHhCCCe
Confidence 33454 666666666655 56899999999876553321 1123322 224557777777777777754
Q ss_pred cEEe
Q 003500 465 GCIS 468 (815)
Q Consensus 465 ~iI~ 468 (815)
-+|.
T Consensus 441 ~~IA 444 (758)
T PLN02447 441 VTIA 444 (758)
T ss_pred EEEE
Confidence 3333
No 56
>cd02930 DCR_FMN 2,4-dienoyl-CoA reductase (DCR) FMN-binding domain. DCR in E. coli is an iron-sulfur flavoenzyme which contains FMN, FAD, and a 4Fe-4S cluster. It is also a monomer, unlike that of its eukaryotic counterparts which form homotetramers and lack the flavin and iron-sulfur cofactors. Metabolism of unsaturated fatty acids requires auxiliary enzymes in addition to those used in b-oxidation. After a given number of cycles through the b-oxidation pathway, those unsaturated fatty acyl-CoAs with double bonds at even-numbered carbon positions contain 2-trans, 4-cis double bonds that can not be modified by enoyl-CoA hydratase. DCR utilizes NADPH to remove the C4-C5 double bond. DCR can catalyze the reduction of both natural fatty acids with cis double bonds, as well as substrates containing trans double bonds. The reaction is initiated by hybrid transfer from NADPH to FAD, which in turn transfers electrons, one at a time, to FMN via the 4Fe-4S cluster. The fully reduced FMN provi
Probab=41.71 E-value=3e+02 Score=31.02 Aligned_cols=23 Identities=22% Similarity=0.338 Sum_probs=18.6
Q ss_pred CChHHHHHHHHhcCCCc-EEEEEee
Q 003500 326 SGLKHVVDESKQNHNVK-YVYVWHA 349 (815)
Q Consensus 326 ~GLk~lv~~Ik~~~Glk-~vgvWHa 349 (815)
.||+.+++.+|+ +|-+ .+=+||+
T Consensus 77 ~~~~~l~~~vh~-~g~~~~~QL~h~ 100 (353)
T cd02930 77 AGHRLITDAVHA-EGGKIALQILHA 100 (353)
T ss_pred HHHHHHHHHHHH-cCCEEEeeccCC
Confidence 499999999999 7855 4567885
No 57
>TIGR02403 trehalose_treC alpha,alpha-phosphotrehalase. Trehalose is a glucose disaccharide that serves in many biological systems as a compatible solute for protection against hyperosmotic and thermal stress. This family describes trehalose-6-phosphate hydrolase, product of the treC (or treA) gene, which is often found together with a trehalose uptake transporter and a trehalose operon repressor.
Probab=37.18 E-value=3.8e+02 Score=32.23 Aligned_cols=33 Identities=30% Similarity=0.524 Sum_probs=24.4
Q ss_pred ccCHHHHHHHHHHHHHHHHhcCCCEEEEccccch
Q 003500 399 LVHPKKVFNFYNELHAYLASCGVDGVKVDVQNII 432 (815)
Q Consensus 399 lv~p~~a~~fYd~l~~~Las~GVD~VKvD~q~~l 432 (815)
+-+|+ ++++..+..+++.+.||||+-+|+-..+
T Consensus 166 ~~np~-v~~~i~~~~~~W~~~giDGfRlDa~~~i 198 (543)
T TIGR02403 166 WENPE-VREELKDVVNFWRDKGVDGFRLDVINLI 198 (543)
T ss_pred CCCHH-HHHHHHHHHHHHHHcCCCEEEEeeehhh
Confidence 34565 5555556777877889999999987655
No 58
>PRK13523 NADPH dehydrogenase NamA; Provisional
Probab=36.62 E-value=5.4e+02 Score=29.02 Aligned_cols=126 Identities=17% Similarity=0.171 Sum_probs=64.2
Q ss_pred ccCHHHHHHHHHHHHhCCCCCcEEEEecccCcccCCCCcccchhhccccccccccCCCccCCcccccccCCcCCCChHHH
Q 003500 252 DVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIKENSKFQKKCQNSEQVSGLKHV 331 (815)
Q Consensus 252 ~vte~~I~~~l~~L~~~Gi~~~~vIIDDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~n~KFp~~~~~~~~p~GLk~l 331 (815)
.+|++ ..+..+..+++|+- .+|.-...-+..... +...+. +..++-.| +++.+
T Consensus 34 ~~t~~-~~~~y~~rA~gG~G--lIi~~~~~v~~~~~~-------------~~~~~~-~~~d~~i~----------~~r~l 86 (337)
T PRK13523 34 KVTNF-HLIHYGTRAAGQVG--LVIVEATAVLPEGRI-------------SDKDLG-IWDDEHIE----------GLHKL 86 (337)
T ss_pred CCCHH-HHHHHHHHHcCCCe--EEEECCeEECccccC-------------CCCcee-cCCHHHHH----------HHHHH
Confidence 35554 45577788888876 776654432221110 001111 11222233 99999
Q ss_pred HHHHHhcCCCc-EEEEEeecccccCCcCCCCcccccccccccccCCCCCC-CCCCCcceeccccccccCccCHHHHHHHH
Q 003500 332 VDESKQNHNVK-YVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGV-MGNQPDIVMDSLAVHGLGLVHPKKVFNFY 409 (815)
Q Consensus 332 v~~Ik~~~Glk-~vgvWHal~GYWgGI~P~s~~~~~y~~~~~~p~~spG~-~~~~pd~a~d~~~~~glglv~p~~a~~fY 409 (815)
++.+|+ +|-+ .+=+||. |.+.. .. . ..+-|...|-. ....|. -.+.+++.+.-
T Consensus 87 ~d~vh~-~G~~i~~QL~H~--G~~~~--~~--~------~~~~ps~~~~~~~~~~p~------------~mt~eeI~~ii 141 (337)
T PRK13523 87 VTFIHD-HGAKAAIQLAHA--GRKAE--LE--G------DIVAPSAIPFDEKSKTPV------------EMTKEQIKETV 141 (337)
T ss_pred HHHHHh-cCCEEEEEccCC--CCCCC--CC--C------CccCCCCCCCCCCCCCCC------------cCCHHHHHHHH
Confidence 999999 7855 4567774 54421 00 0 00011100000 000110 12356666666
Q ss_pred HHHHH---HHHhcCCCEEEEccc
Q 003500 410 NELHA---YLASCGVDGVKVDVQ 429 (815)
Q Consensus 410 d~l~~---~Las~GVD~VKvD~q 429 (815)
++|-+ ...++|+|+|.+-+-
T Consensus 142 ~~f~~aA~~a~~aGfDgVeih~a 164 (337)
T PRK13523 142 LAFKQAAVRAKEAGFDVIEIHGA 164 (337)
T ss_pred HHHHHHHHHHHHcCCCEEEEccc
Confidence 65543 567799999999875
No 59
>PLN00196 alpha-amylase; Provisional
Probab=35.66 E-value=5.4e+02 Score=30.11 Aligned_cols=83 Identities=17% Similarity=0.327 Sum_probs=50.1
Q ss_pred CCcccccccccccccccccCHHHHHHHHHHHHhCCCCCcEEEEecccCcccCCCCcccchhhccccccccccCCCccCCc
Q 003500 235 PSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIKENSK 314 (815)
Q Consensus 235 P~~~d~lGWCTWdaf~~~vte~~I~~~l~~L~~~Gi~~~~vIIDDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~n~K 314 (815)
..++.+|=|.+|..=+. .-.+|.+.|+.|++.|+. .| |-.+--... ...|+.. ..+.++. +.+
T Consensus 25 ~v~~Q~F~W~~~~~~gg--~~~~i~~kldyL~~LGvt--aI-----WL~P~~~s~------s~hGY~~-~D~y~ld-~~~ 87 (428)
T PLN00196 25 QVLFQGFNWESWKQNGG--WYNFLMGKVDDIAAAGIT--HV-----WLPPPSHSV------SEQGYMP-GRLYDLD-ASK 87 (428)
T ss_pred CEEEEeeccCCCCCCCc--CHHHHHHHHHHHHHcCCC--EE-----EeCCCCCCC------CCCCCCc-cccCCCC-ccc
Confidence 46778898999876433 457799999999999987 22 112111110 0012221 1122221 246
Q ss_pred ccccccCCcCCCChHHHHHHHHhcCCCc
Q 003500 315 FQKKCQNSEQVSGLKHVVDESKQNHNVK 342 (815)
Q Consensus 315 Fp~~~~~~~~p~GLk~lv~~Ik~~~Glk 342 (815)
|-+. ..|+.+|+.+|+ .|||
T Consensus 88 fGt~-------~elk~Lv~~aH~-~GIk 107 (428)
T PLN00196 88 YGNE-------AQLKSLIEAFHG-KGVQ 107 (428)
T ss_pred CCCH-------HHHHHHHHHHHH-CCCE
Confidence 6532 479999999999 6999
No 60
>PF14307 Glyco_tran_WbsX: Glycosyltransferase WbsX
Probab=34.20 E-value=4.7e+02 Score=29.40 Aligned_cols=146 Identities=12% Similarity=0.155 Sum_probs=86.3
Q ss_pred ccccccCHHHHHHHHHHHHhCCCCCcEEEEecccCcccCCCCcccchhhccccccccccCCCccCCcccccccCCcCCCC
Q 003500 248 AFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIKENSKFQKKCQNSEQVSG 327 (815)
Q Consensus 248 af~~~vte~~I~~~l~~L~~~Gi~~~~vIIDDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~n~KFp~~~~~~~~p~G 327 (815)
.||..-+++.+.++++.+++.||. .++++=-|+... +|. +
T Consensus 50 GyYdl~~p~v~~~Q~~lA~~~GI~--gF~~~~Ywf~gk-------------------~lL--e----------------- 89 (345)
T PF14307_consen 50 GYYDLRDPEVMEKQAELAKEYGID--GFCFYHYWFNGK-------------------RLL--E----------------- 89 (345)
T ss_pred CcccCCCHHHHHHHHHHHHHhCCC--EEEEEeeecCCc-------------------hHH--H-----------------
Confidence 466667889999999999999998 999999999321 121 1
Q ss_pred hHHHHHHHHh-cCCCcEEEEE--eecccccCCcCCCCcccccccccccccCCCCCCCCCCCcceeccccccccCccCHHH
Q 003500 328 LKHVVDESKQ-NHNVKYVYVW--HALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHGLGLVHPKK 404 (815)
Q Consensus 328 Lk~lv~~Ik~-~~Glk~vgvW--Hal~GYWgGI~P~s~~~~~y~~~~~~p~~spG~~~~~pd~a~d~~~~~glglv~p~~ 404 (815)
+++-..+.. +..+++.-+| |.....|-|........++ +...++
T Consensus 90 -~p~~~~l~~~~~d~pFcl~WAN~~w~~~w~g~~~~~l~~q~--------------------------------y~~~~d 136 (345)
T PF14307_consen 90 -KPLENLLASKEPDFPFCLCWANENWTRRWDGRNNEILIEQK--------------------------------YSGEDD 136 (345)
T ss_pred -HHHHHHHhcCCCCCcEEEEECCChhhhccCCCCcccccccc--------------------------------CCchhH
Confidence 222112222 2348877788 6666677665222111111 112356
Q ss_pred HHHHHHHHHHHHHhcCCCEEEEccccchhhccCCCCCchhHHHHHHHHHHHHHHhc-CCCCcEEeecc
Q 003500 405 VFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASIARN-FPDNGCISCMC 471 (815)
Q Consensus 405 a~~fYd~l~~~Las~GVD~VKvD~q~~l~~l~~~~~grv~l~~ay~~AL~~s~~~~-f~g~~iI~cMs 471 (815)
..+|++.+..++++- -|+|||.-..+-.... +.....+.+.+.|++.+.++ ++|--+|.+..
T Consensus 137 ~~~~~~~l~~~F~D~--rYikVdGKPv~~Iy~p---~~~pd~~~~~~~wr~~a~~~G~~giyii~~~~ 199 (345)
T PF14307_consen 137 WKEHFRYLLPYFKDP--RYIKVDGKPVFLIYRP---GDIPDIKEMIERWREEAKEAGLPGIYIIAVQG 199 (345)
T ss_pred HHHHHHHHHHHhCCC--CceeECCEEEEEEECc---ccccCHHHHHHHHHHHHHHcCCCceEEEEEec
Confidence 677888888888765 5899999765433322 12233455555665544443 34444555554
No 61
>PF15016 DUF4520: Domain of unknown function (DUF4520)
Probab=34.17 E-value=98 Score=28.17 Aligned_cols=50 Identities=20% Similarity=0.278 Sum_probs=37.8
Q ss_pred eEEEEEEEeeceeEEEEcCCCceeEECCeEeeEEEe----CCceeEEEEccCCc
Q 003500 754 ATISLKVRGCGRFGIYSSQRPLKCTVGSIQTDFTYD----SATGLMTMTLPVPE 803 (815)
Q Consensus 754 ~~v~v~vkg~G~fg~YsS~~P~~c~vdg~~~~f~y~----~~~gl~t~~l~~~~ 803 (815)
+.-+..+-|.|+|-||+-.+=+.+-.|+....+.|+ .+.+.+++.+|-++
T Consensus 6 v~~e~~i~~~GrF~AysDgrVr~~F~Drt~L~l~~~~~~~~~~~~c~l~~pDG~ 59 (85)
T PF15016_consen 6 VLEESSIPGVGRFTAYSDGRVRVHFDDRTILTLIWNFSSREELGWCKLTFPDGQ 59 (85)
T ss_pred eEEEEecCCceEEEEEcCCeEEEEEcCCCEEEEEeCCCCcccCCEEEEEccCCC
Confidence 345667789999999999999999999999999882 12366666655443
No 62
>PRK14833 undecaprenyl pyrophosphate synthase; Provisional
Probab=31.65 E-value=2e+02 Score=30.93 Aligned_cols=23 Identities=22% Similarity=0.440 Sum_probs=16.4
Q ss_pred HHHhhhhhhhccCCCCCCCcccc
Q 003500 504 ISSVAYNTLFLGEFMQPDWDMFH 526 (815)
Q Consensus 504 i~~na~nsl~~g~~~~PDwDMf~ 526 (815)
.++++|.-++.-...|||....+
T Consensus 192 lWQ~ayaElyF~~~lWPdf~~~d 214 (233)
T PRK14833 192 LWQSSYAELFFTPILWPDFTPKD 214 (233)
T ss_pred HHHHhceeEEECCCCCCcCCHHH
Confidence 46677777777777888876554
No 63
>cd02803 OYE_like_FMN_family Old yellow enzyme (OYE)-like FMN binding domain. OYE was the first flavin-dependent enzyme identified, however its true physiological role remains elusive to this day. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Members of OYE family include trimethylamine dehydrogenase, 2,4-dienoyl-CoA reductase, enoate reductase, pentaerythriol tetranitrate reductase, xenobiotic reductase, and morphinone reductase.
Probab=31.05 E-value=3e+02 Score=30.26 Aligned_cols=23 Identities=26% Similarity=0.551 Sum_probs=18.0
Q ss_pred CChHHHHHHHHhcCCCc-EEEEEee
Q 003500 326 SGLKHVVDESKQNHNVK-YVYVWHA 349 (815)
Q Consensus 326 ~GLk~lv~~Ik~~~Glk-~vgvWHa 349 (815)
.++|.+++.+|+ +|-+ .+=+||+
T Consensus 77 ~~~~~~~~~vh~-~g~~~~~Ql~h~ 100 (327)
T cd02803 77 PGLRKLTEAVHA-HGAKIFAQLAHA 100 (327)
T ss_pred HHHHHHHHHHHh-CCCHhhHHhhCC
Confidence 499999999999 6844 3557886
No 64
>cd02929 TMADH_HD_FMN Trimethylamine dehydrogenase (TMADH) and histamine dehydrogenase (HD) FMN-binding domain. TMADH is an iron-sulfur flavoprotein that catalyzes the oxidative demethylation of trimethylamine to form dimethylamine and formaldehyde. The protein forms a symetrical dimer with each subunit containing one 4Fe-4S cluster and one FMN cofactor. It contains a unique flavin, in the form of a 6-S-cysteinyl FMN which is bent by ~25 degrees along the N5-N10 axis of the flavin isoalloxazine ring. This modification of the conformation of the flavin is thought to facilitate catalysis.The closely related histamine dehydrogenase catalyzes oxidative deamination of histamine.
Probab=30.36 E-value=8.4e+02 Score=27.76 Aligned_cols=23 Identities=22% Similarity=0.489 Sum_probs=18.9
Q ss_pred CChHHHHHHHHhcCCCc-EEEEEee
Q 003500 326 SGLKHVVDESKQNHNVK-YVYVWHA 349 (815)
Q Consensus 326 ~GLk~lv~~Ik~~~Glk-~vgvWHa 349 (815)
.||+.+++.||+ +|-+ .+=+||+
T Consensus 83 ~~~~~l~~~vh~-~G~~i~~QL~H~ 106 (370)
T cd02929 83 RNLAAMTDAVHK-HGALAGIELWHG 106 (370)
T ss_pred HHHHHHHHHHHH-CCCeEEEecccC
Confidence 499999999999 7955 4567887
No 65
>KOG2500 consensus Uncharacterized conserved protein [Function unknown]
Probab=29.40 E-value=34 Score=36.25 Aligned_cols=34 Identities=29% Similarity=0.493 Sum_probs=29.2
Q ss_pred cceEEecCCCCeEeEEecCC-cEEEEEEeeeeeec
Q 003500 666 SGEVVRLPKGASVPVTLKVL-EYELFHFCPLKEIS 699 (815)
Q Consensus 666 sg~l~~l~~~~~~~v~L~~~-~~ei~t~~Pv~~~~ 699 (815)
+|++.++.++....+.|+.+ ..|+|.-|||.++.
T Consensus 43 tGrlrvvakg~~~~ikLeD~tsg~LfA~c~id~~~ 77 (253)
T KOG2500|consen 43 TGRLRVVAKGERCEIKLEDKTSGELFAQCPIDEGP 77 (253)
T ss_pred cceeEEEEcCcEEEEEeccCCchhhhhhCcccCCC
Confidence 77888888899999999976 48999999998764
No 66
>PF13200 DUF4015: Putative glycosyl hydrolase domain
Probab=28.84 E-value=1.4e+02 Score=33.44 Aligned_cols=63 Identities=19% Similarity=0.395 Sum_probs=41.2
Q ss_pred CChHHHHHHHHHHHHHHhhcccccccccCCCcccccccccccc-cccccCHHHHHHHHHHHHhCCCC
Q 003500 206 PNPFEVISQAVKAVEKYMQTFTHREKKKLPSFLDWFGWCTWDA-FYTDVTAEGVDEGLKSLSAGGTP 271 (815)
Q Consensus 206 ~dp~~~i~~A~~~v~~~l~tf~~~~~K~~P~~~d~lGWCTWda-f~~~vte~~I~~~l~~L~~~Gi~ 271 (815)
.+||++++++++..++.+..... ..+-+| |+..|.. +|-. .+...+++.|.++++++++.|+.
T Consensus 242 ~~PY~~v~~~~~~~~~~~~~~~~-~~~~RP-WlQ~Ft~-~~~~~~~~~Yg~~ev~aQI~A~~d~g~~ 305 (316)
T PF13200_consen 242 LEPYEIVYRSLKRAKERLRGLEG-PAIIRP-WLQDFTA-SWLGKNYKEYGPEEVRAQIQALKDAGIE 305 (316)
T ss_pred cChHHHHHHHHHHHHHHhhcCCC-CCeEec-ccccccc-cccccCccccCHHHHHHHHHHHHHcCCC
Confidence 57999999999877766544211 112233 3322211 3322 25678999999999999999987
No 67
>cd02875 GH18_chitobiase Chitobiase (also known as di-N-acetylchitobiase) is a lysosomal glycosidase that hydrolyzes the reducing-end N-acetylglucosamine from the chitobiose core of oligosaccharides during the ordered degradation of asparagine-linked glycoproteins in eukaryotes. Chitobiase can only do so if the asparagine that joins the oligosaccharide to protein is previously removed by a glycosylasparaginase. Chitobiase is therefore the final step in the lysosomal degradation of the protein/carbohydrate linkage component of asparagine-linked glycoproteins. The catalytic domain of chitobiase is an eight-stranded alpha/beta barrel fold similar to that of other family 18 glycosyl hydrolases such as hevamine and chitotriosidase.
Probab=28.63 E-value=97 Score=35.10 Aligned_cols=32 Identities=16% Similarity=0.252 Sum_probs=28.0
Q ss_pred cCHHHHHHHHHHHHHHHHhcCCCEEEEccccc
Q 003500 400 VHPKKVFNFYNELHAYLASCGVDGVKVDVQNI 431 (815)
Q Consensus 400 v~p~~a~~fYd~l~~~Las~GVD~VKvD~q~~ 431 (815)
.+|..-..|-+++.+++.+.|+|||-+|+.+.
T Consensus 92 ~~~~~R~~fi~siv~~~~~~gfDGIdIDwE~p 123 (358)
T cd02875 92 SNPTYRTQWIQQKVELAKSQFMDGINIDIEQP 123 (358)
T ss_pred CCHHHHHHHHHHHHHHHHHhCCCeEEEcccCC
Confidence 35677788999999999999999999999763
No 68
>cd00598 GH18_chitinase-like The GH18 (glycosyl hydrolase, family 18) type II chitinases hydrolyze chitin, an abundant polymer of beta-1,4-linked N-acetylglucosamine (GlcNAc) which is a major component of the cell wall of fungi and the exoskeleton of arthropods. Chitinases have been identified in viruses, bacteria, fungi, protozoan parasites, insects, and plants. The structure of the GH18 domain is an eight-stranded beta/alpha barrel with a pronounced active-site cleft at the C-terminal end of the beta-barrel. The GH18 family includes chitotriosidase, chitobiase, hevamine, zymocin-alpha, narbonin, SI-CLP (stabilin-1 interacting chitinase-like protein), IDGF (imaginal disc growth factor), CFLE (cortical fragment-lytic enzyme) spore hydrolase, the type III and type V plant chitinases, the endo-beta-N-acetylglucosaminidases, and the chitolectins. The GH85 (glycosyl hydrolase, family 85) ENGases (endo-beta-N-acetylglucosaminidases) are closely related to the GH18 chitinases and are inclu
Probab=27.79 E-value=1.9e+02 Score=29.25 Aligned_cols=65 Identities=18% Similarity=0.270 Sum_probs=41.0
Q ss_pred CHHHHHHHHHHHHHHHHhcCCCEEEEccccchhhccCCCCCchhHHHHHHHHHHHHHHhcCCCCcEEeeccCC
Q 003500 401 HPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASIARNFPDNGCISCMCHN 473 (815)
Q Consensus 401 ~p~~a~~fYd~l~~~Las~GVD~VKvD~q~~l~~l~~~~~grv~l~~ay~~AL~~s~~~~f~g~~iI~cMs~~ 473 (815)
+++..+.|.+.+.+++.+.|+|||-+|+...- ..+. .....|...|+ .+++.|+..+.+.+++..
T Consensus 85 ~~~~~~~f~~~~~~~v~~~~~DGidiD~E~~~------~~~~-~~~~~~~~ll~-~lr~~l~~~~~~ls~a~~ 149 (210)
T cd00598 85 DPASRAAFANSLVSFLKTYGFDGVDIDWEYPG------AADN-SDRENFITLLR-ELRSALGAANYLLTIAVP 149 (210)
T ss_pred CHHHHHHHHHHHHHHHHHcCCCceEEeeeCCC------CcCc-cHHHHHHHHHH-HHHHHhcccCcEEEEEec
Confidence 46778899999999999999999999996531 1110 11223333333 234555543566676643
No 69
>cd04733 OYE_like_2_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 2. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Other members of OYE family include trimethylamine dehydrogenase, 2,4-dienoyl-CoA reductase, enoate reductase, pentaerythriol tetranitrate reductase, xenobiotic reductase, and morphinone reductase.
Probab=27.57 E-value=6.6e+02 Score=28.06 Aligned_cols=23 Identities=9% Similarity=0.201 Sum_probs=18.7
Q ss_pred CChHHHHHHHHhcCCCc-EEEEEee
Q 003500 326 SGLKHVVDESKQNHNVK-YVYVWHA 349 (815)
Q Consensus 326 ~GLk~lv~~Ik~~~Glk-~vgvWHa 349 (815)
.||+.+++.+|+ +|-+ .+=+||+
T Consensus 82 ~~~~~l~~~vh~-~G~~~~~Ql~h~ 105 (338)
T cd04733 82 EAFREWAAAAKA-NGALIWAQLNHP 105 (338)
T ss_pred HHHHHHHHHHHh-cCCEEEEEccCC
Confidence 499999999999 7966 4556884
No 70
>cd04747 OYE_like_5_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 5. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Other members of OYE family include trimethylamine dehydrogenase, 2,4-dienoyl-CoA reductase, enoate reductase, pentaerythriol tetranitrate reductase, xenobiotic reductase, and morphinone reductase.
Probab=26.70 E-value=5e+02 Score=29.64 Aligned_cols=26 Identities=38% Similarity=0.573 Sum_probs=19.8
Q ss_pred CChHHHHHHHHhcCCCc-EEEEEeeccccc
Q 003500 326 SGLKHVVDESKQNHNVK-YVYVWHALAGYW 354 (815)
Q Consensus 326 ~GLk~lv~~Ik~~~Glk-~vgvWHal~GYW 354 (815)
.+|+.+++.+|+ +|-+ .+=+||+ |.+
T Consensus 78 ~~~~~l~d~vh~-~Ga~i~~QL~H~--Gr~ 104 (361)
T cd04747 78 AGWKKVVDEVHA-AGGKIAPQLWHV--GAM 104 (361)
T ss_pred HHHHHHHHHHHh-cCCEEEEeccCC--CCC
Confidence 399999999999 7854 4567885 544
No 71
>cd06544 GH18_narbonin Narbonin is a plant 2S protein from the globulin fraction of narbon bean (Vicia narbonensis L.) cotyledons with unknown function. Narbonin has a glycosyl hydrolase family 18 (GH18) domain without the conserved catalytic residues and with no known enzymatic activity. Narbonin amounts to up to 3% of the total seed globulins of mature seeds and was thought to be a storage protein but was found to degrade too slowly during germination. This family also includes the VfNOD32 nodulin from Vicia faba.
Probab=25.04 E-value=1.3e+02 Score=32.45 Aligned_cols=28 Identities=21% Similarity=0.395 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCEEEEcccc
Q 003500 403 KKVFNFYNELHAYLASCGVDGVKVDVQN 430 (815)
Q Consensus 403 ~~a~~fYd~l~~~Las~GVD~VKvD~q~ 430 (815)
.-++.|.+++.+++..+|+|||-+|+..
T Consensus 96 ~~~~~fv~S~~~~l~~~~fDGiDiDwE~ 123 (253)
T cd06544 96 SWVSNAVSSLTSIIQTYNLDGIDIDYEH 123 (253)
T ss_pred hHHHHHHHHHHHHHHHhCCCceeeeccc
Confidence 3456789999999999999999999975
No 72
>cd06548 GH18_chitinase The GH18 (glycosyl hydrolases, family 18) type II chitinases hydrolyze chitin, an abundant polymer of N-acetylglucosamine and have been identified in bacteria, fungi, insects, plants, viruses, and protozoan parasites. The structure of this domain is an eight-stranded alpha/beta barrel with a pronounced active-site cleft at the C-terminal end of the beta-barrel.
Probab=24.71 E-value=2.6e+02 Score=30.88 Aligned_cols=30 Identities=17% Similarity=0.369 Sum_probs=27.1
Q ss_pred CHHHHHHHHHHHHHHHHhcCCCEEEEcccc
Q 003500 401 HPKKVFNFYNELHAYLASCGVDGVKVDVQN 430 (815)
Q Consensus 401 ~p~~a~~fYd~l~~~Las~GVD~VKvD~q~ 430 (815)
+++..+.|-+++.+++.+.|+|||=+|+..
T Consensus 106 ~~~~r~~Fi~siv~~l~~~~fDGidiDwE~ 135 (322)
T cd06548 106 TEASRAKFADSAVDFIRKYGFDGIDIDWEY 135 (322)
T ss_pred CHHHHHHHHHHHHHHHHhcCCCeEEECCcC
Confidence 467778899999999999999999999875
No 73
>PLN02960 alpha-amylase
Probab=24.22 E-value=5.1e+02 Score=33.20 Aligned_cols=69 Identities=16% Similarity=0.153 Sum_probs=38.1
Q ss_pred ccCHHHHHHHHH-HHHHHHHhcCCCEEEEccccchhhccCCC---CC---------chhHHHHHHHHHHHHHHhcCCCCc
Q 003500 399 LVHPKKVFNFYN-ELHAYLASCGVDGVKVDVQNIIETLGAGH---GG---------RVSLTRSYHQALEASIARNFPDNG 465 (815)
Q Consensus 399 lv~p~~a~~fYd-~l~~~Las~GVD~VKvD~q~~l~~l~~~~---~g---------rv~l~~ay~~AL~~s~~~~f~g~~ 465 (815)
+-+| .++.|.- .+.-.|.+.+|||+-+|+...+.++..+. .| .-.-+-.|-+-|...+.+.+++.-
T Consensus 528 y~~~-eVr~fLlsna~yWl~EyhIDGfR~DAV~sMlY~d~g~~~~~G~~~~~~n~~~d~~Ai~fL~~lN~~v~~~~P~vi 606 (897)
T PLN02960 528 YGDH-EVLHFLLSNLNWWVTEYRVDGFQFHSLGSMLYTHNGFASFTGDLDEYCNQYVDRDALIYLILANEMLHQLHPNII 606 (897)
T ss_pred CCCH-HHHHHHHHHHHHHHHHHCCCceeecccceeeeeccCccccCCcccccCCccCCchHHHHHHHHHHHHHhhCCCeE
Confidence 3444 4566654 44445678999999999876544332110 00 112244455666666666666543
Q ss_pred EEe
Q 003500 466 CIS 468 (815)
Q Consensus 466 iI~ 468 (815)
+|.
T Consensus 607 lIA 609 (897)
T PLN02960 607 TIA 609 (897)
T ss_pred EEE
Confidence 343
No 74
>PRK10240 undecaprenyl pyrophosphate synthase; Provisional
Probab=24.10 E-value=5.5e+02 Score=27.53 Aligned_cols=19 Identities=5% Similarity=0.284 Sum_probs=13.3
Q ss_pred hHHHHHHHHhcCCCcEEEEE
Q 003500 328 LKHVVDESKQNHNVKYVYVW 347 (815)
Q Consensus 328 Lk~lv~~Ik~~~Glk~vgvW 347 (815)
++.+++...+ +|||++.++
T Consensus 26 l~~i~~~c~~-~GI~~lT~y 44 (229)
T PRK10240 26 VRRAVSFAAN-NGIEALTLY 44 (229)
T ss_pred HHHHHHHHHH-cCCCEEEEE
Confidence 4445556666 899998885
No 75
>PLN02784 alpha-amylase
Probab=23.77 E-value=1.5e+03 Score=29.21 Aligned_cols=79 Identities=19% Similarity=0.204 Sum_probs=46.8
Q ss_pred cccccccccccccccccCHHHHHHHHHHHHhCCCCCcEEEEecccCcccCCCCcccchhhccccccccccCCCccCCccc
Q 003500 237 FLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIKENSKFQ 316 (815)
Q Consensus 237 ~~d~lGWCTWdaf~~~vte~~I~~~l~~L~~~Gi~~~~vIIDDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~n~KFp 316 (815)
++.+|=|.+|.. ..--.+|.+.++.|++.|+. .|-| ..-.... ...|++. ..+.+ -+.+|-
T Consensus 505 mlQgF~Wds~~d---g~w~~~I~ekldyL~~LG~t--aIWL-----pP~~~s~------s~~GY~p-~D~y~--lds~yG 565 (894)
T PLN02784 505 LCQGFNWESHKS---GRWYMELGEKAAELSSLGFT--VVWL-----PPPTESV------SPEGYMP-KDLYN--LNSRYG 565 (894)
T ss_pred EEEeEEcCcCCC---CchHHHHHHHHHHHHHhCCC--EEEe-----CCCCCCC------CCCCcCc-ccccc--cCcCcC
Confidence 456677777653 12257889999999999987 3322 2211100 0012221 11222 346666
Q ss_pred ccccCCcCCCChHHHHHHHHhcCCCc
Q 003500 317 KKCQNSEQVSGLKHVVDESKQNHNVK 342 (815)
Q Consensus 317 ~~~~~~~~p~GLk~lv~~Ik~~~Glk 342 (815)
.. ..|+.+|+.+|+ .||+
T Consensus 566 T~-------~ELk~LI~a~H~-~GIk 583 (894)
T PLN02784 566 TI-------DELKDLVKSFHE-VGIK 583 (894)
T ss_pred CH-------HHHHHHHHHHHH-CCCE
Confidence 43 479999999999 6998
No 76
>COG1649 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=23.54 E-value=1.2e+03 Score=27.25 Aligned_cols=143 Identities=15% Similarity=0.167 Sum_probs=74.2
Q ss_pred ccCHHHHHHHHHHHHhCCCCCcEEEE-ecccCcccCCCCcccchhhccccccccccCCCccCCcccccccCCcCCCChHH
Q 003500 252 DVTAEGVDEGLKSLSAGGTPPKFLII-DDGWQQIENKPKEESNCIVQEGAQFASRLTGIKENSKFQKKCQNSEQVSGLKH 330 (815)
Q Consensus 252 ~vte~~I~~~l~~L~~~Gi~~~~vII-DDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~n~KFp~~~~~~~~p~GLk~ 330 (815)
-.+++++.+.++.|...|+..-|+.| =||---.. +.... +....+ ..+. ....-+=|+.
T Consensus 60 ~~~~~el~~~ld~l~~ln~NTv~~qV~~~G~~lyp--------------S~~~p-~s~~~~-~~~~----~~~g~DpLa~ 119 (418)
T COG1649 60 LFQRQELKDILDDLQKLNFNTVYPQVWNDGDALYP--------------SAVLP-WSDGLP-GVLG----VDPGYDPLAF 119 (418)
T ss_pred cccHHHHHHHHHHHHHcCCceeEEEEecCcccccc--------------ccccc-cccCcC-cccC----CCCCCChHHH
Confidence 56889999999999999999665544 22221100 00000 111110 0000 0011134788
Q ss_pred HHHHHHhcCCCcEEEEEeecccccCCcCC-CCcccccccccccccCCCCCCCCCCCcceeccccccc---cCccCH--HH
Q 003500 331 VVDESKQNHNVKYVYVWHALAGYWGGVKP-AADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHG---LGLVHP--KK 404 (815)
Q Consensus 331 lv~~Ik~~~Glk~vgvWHal~GYWgGI~P-~s~~~~~y~~~~~~p~~spG~~~~~pd~a~d~~~~~g---lglv~p--~~ 404 (815)
+|++.|++ ||+ |--|..... +.| .+++.+.+.. +.....|++..-. ..| ..+.|| ++
T Consensus 120 ~I~~AHkr-~l~-v~aWf~~~~----~a~~~s~~~~~~p~---------~~~~~~~~~~~~~--~~~~~~~~~ldPg~Pe 182 (418)
T COG1649 120 VIAEAHKR-GLE-VHAWFNPYR----MAPPTSPLTKRHPH---------WLTTKRPGWVYVR--HQGWGKRVWLDPGIPE 182 (418)
T ss_pred HHHHHHhc-CCe-eeechhhcc----cCCCCChhHhhCCC---------CcccCCCCeEEEe--cCCceeeeEeCCCChH
Confidence 89999984 999 777877632 333 2222211111 1111223332110 111 123343 45
Q ss_pred HHHHHHHHHH-HHHhcCCCEEEEccccc
Q 003500 405 VFNFYNELHA-YLASCGVDGVKVDVQNI 431 (815)
Q Consensus 405 a~~fYd~l~~-~Las~GVD~VKvD~q~~ 431 (815)
+++|+-++.. ....+.||+|-.|.-..
T Consensus 183 vq~~i~~lv~evV~~YdvDGIQfDd~fy 210 (418)
T COG1649 183 VQDFITSLVVEVVRNYDVDGIQFDDYFY 210 (418)
T ss_pred HHHHHHHHHHHHHhCCCCCceecceeec
Confidence 7777765554 55779999999998664
No 77
>PLN03244 alpha-amylase; Provisional
Probab=22.37 E-value=8.1e+02 Score=31.25 Aligned_cols=66 Identities=12% Similarity=0.081 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHH-HHHhcCCCEEEEccccchhhccCCC-----------CC-chhHHHHHHHHHHHHHHhcCCCCcEEe
Q 003500 403 KKVFNFYNELHA-YLASCGVDGVKVDVQNIIETLGAGH-----------GG-RVSLTRSYHQALEASIARNFPDNGCIS 468 (815)
Q Consensus 403 ~~a~~fYd~l~~-~Las~GVD~VKvD~q~~l~~l~~~~-----------~g-rv~l~~ay~~AL~~s~~~~f~g~~iI~ 468 (815)
..+++|.-+-.. .+.+.+|||+-+|+...+-++.-+. .. .-..+-.|-+-+...+.+.+|+.-+|+
T Consensus 506 ~EVr~FLLsna~yWleEyhIDGFRfDaVtSMLY~d~G~~~f~g~~~~y~n~~~d~dAv~fL~laN~~ih~~~P~~itIA 584 (872)
T PLN03244 506 LDVLHFLISNLNWWITEYQIDGFQFHSLASMIYTHNGFASFNGDLDDYCNQYVDKDALMYLILANEILHALHPKIITIA 584 (872)
T ss_pred HHHHHHHHHHHHHHHHHhCcCcceeecchhheeeccccccccCCccccccccCCchHHHHHHHHHHHHHHhCCCeEEEE
Confidence 356666655555 5678999999999875543321110 00 012244566666667777777533333
No 78
>PLN02411 12-oxophytodienoate reductase
Probab=21.05 E-value=5e+02 Score=29.94 Aligned_cols=23 Identities=26% Similarity=0.553 Sum_probs=18.9
Q ss_pred CChHHHHHHHHhcCCCc-EEEEEee
Q 003500 326 SGLKHVVDESKQNHNVK-YVYVWHA 349 (815)
Q Consensus 326 ~GLk~lv~~Ik~~~Glk-~vgvWHa 349 (815)
.||+.+++.||+ +|-| .+=+||+
T Consensus 87 ~~~~~l~~avH~-~G~~i~~QL~H~ 110 (391)
T PLN02411 87 EAWKKVVDAVHA-KGSIIFCQLWHV 110 (391)
T ss_pred HHHHHHHHHHHh-cCCEEEEeccCC
Confidence 499999999999 7855 5668886
No 79
>PRK14835 undecaprenyl pyrophosphate synthase; Provisional
Probab=20.92 E-value=2.5e+02 Score=30.92 Aligned_cols=39 Identities=15% Similarity=0.284 Sum_probs=24.6
Q ss_pred cCeEEccCccCCCCccchhhHHHHhhhhhhhccCCCCCCCcccc
Q 003500 483 TAVIRASDDYYPRDPASHTIHISSVAYNTLFLGEFMQPDWDMFH 526 (815)
Q Consensus 483 ~~~~R~SdDf~p~~p~~~~~Hi~~na~nsl~~g~~~~PDwDMf~ 526 (815)
-.++|+|..-- +.-..+++++|.-++.-...|||.+.++
T Consensus 220 DLLIRTsGE~R-----LSnFLLWQsayaElyF~d~lWPdF~~~d 258 (275)
T PRK14835 220 DFIIRTSGEIR-----LSGFLLWQSAYSEYYFCDVYWPGFRKVD 258 (275)
T ss_pred CEEEecCCCcc-----ccCCHHHhhhheEEEeCCCCCCcCCHHH
Confidence 34567776321 1122357778888777788899877654
No 80
>cd00475 CIS_IPPS Cis (Z)-Isoprenyl Diphosphate Synthases (cis-IPPS); homodimers which catalyze the successive 1'-4 condensation of the isopentenyl diphosphate (IPP) molecule to trans,trans-farnesyl diphosphate (FPP) or to cis,trans-FPP to form long-chain polyprenyl diphosphates. A few can also catalyze the condensation of IPP to trans-geranyl diphosphate to form the short-chain cis,trans- FPP. In prokaryotes, the cis-IPPS, undecaprenyl diphosphate synthase (UPP synthase) catalyzes the formation of the carrier lipid UPP in bacterial cell wall peptidooglycan biosynthesis. Similarly, in eukaryotes, the cis-IPPS, dehydrodolichyl diphosphate (dedol-PP) synthase catalyzes the formation of the polyisoprenoid glycosyl carrier lipid dolichyl monophosphate. cis-IPPS are mechanistically and structurally distinct from trans-IPPS, lacking the DDXXD motifs, yet requiring Mg2+ for activity.
Probab=20.57 E-value=4.8e+02 Score=27.79 Aligned_cols=19 Identities=21% Similarity=0.298 Sum_probs=13.7
Q ss_pred hHHHHHHHHhcCCCcEEEEE
Q 003500 328 LKHVVDESKQNHNVKYVYVW 347 (815)
Q Consensus 328 Lk~lv~~Ik~~~Glk~vgvW 347 (815)
++.+++...+ +|||++.++
T Consensus 33 ~~~i~~~~~~-~gI~~lTvy 51 (221)
T cd00475 33 LRDILRWCLE-LGVKEVTLY 51 (221)
T ss_pred HHHHHHHHHH-cCCCEEEEE
Confidence 4455666666 899998874
No 81
>TIGR02104 pulA_typeI pullulanase, type I. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family consists of pullulanases related to the subfamilies described in TIGR02102 and TIGR02103 but having a different domain architecture with shorter sequences. Members are called type I pullulanases.
Probab=20.46 E-value=7.5e+02 Score=30.14 Aligned_cols=28 Identities=18% Similarity=0.364 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHHH-HhcCCCEEEEcccc
Q 003500 403 KKVFNFYNELHAYL-ASCGVDGVKVDVQN 430 (815)
Q Consensus 403 ~~a~~fYd~l~~~L-as~GVD~VKvD~q~ 430 (815)
+.+++|.-+..+++ .+.||||+-+|...
T Consensus 294 ~~v~~~i~~~~~~W~~e~~iDGfR~D~~~ 322 (605)
T TIGR02104 294 EMMRKFIVDSVLYWVKEYNIDGFRFDLMG 322 (605)
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEechh
Confidence 44666665555555 56899999999754
Done!