Your job contains 1 sequence.
>003501
MADTTTMSNVEDRPSKTLKRKRAWPALTGEDKESRIRRFNEEVKWLFGYYKEMITNQRLT
IDLSECAGSLNGMVAALMEESELPLTKLVEEIHVKLKENGSEKLGVGLAAVKSAVLFVGQ
RVMYGVSNADTDILEDDAEASLWCWETRDVKLLPKSVRGSLRIRRTFRKKIHERITAVSA
MITALQKSESDPSFINDLMKASKKLGKVLSEASIRVLVDSMLKKNGAEIVEKDAKREEKI
LIKQLEKNKREVEKEKKRMDCEQQKEKLHSERELKRLQEEAERDERRREKEEADIRKQIR
KQQEEADKEQRHREKEEAEMKKKLALQKQASMMERFLKRSKILTSCQNDESSPRAITSVL
LSKNSEQLPEAVTKLVDSTLSSNDEINIDDIRRSHLSSWHRFGHFVRSNRNQHWGIRRKP
KTELFKELKLTNRGLGHDDDLSMERSEDRCEAQTVDDKSCITSSDSSSAITKCKRWKQLL
QFDKSHRPAFYGIWPKKSHIVGPRHPLMKDPDLDYDIDSDEEWEEEEPGESLSDCEKDGD
EEGCSKADDEDESEDGFFVPDGYLSEDEGVQVDRMEIDLSAEDTKSSPSYKQELESKESC
ALVRQRKYLSSLTEQALQKNQPLIILNLMHEKVPLLMAEDLSGTSNMEQKCLQALSIRPF
PGDLHVEITVDIMDDENEKDCLSNGKGSTTLISESDLPAIVSVIQSCSTNMNKILEALQQ
KFPSISRAQLRNKVREISDFNFAENRWQVKREILIELGYSPDKNGGRAKGIATFFSKRCL
PPDGKSLNPNEASPLSSLKPGSAVHGQHGCTYNGL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 003501
(815 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2034183 - symbol:FAS1 "FASCIATA 1" species:370... 1734 1.3e-178 1
UNIPROTKB|B2ZX90 - symbol:FSM "Chromatin assembly factor ... 867 3.6e-135 2
UNIPROTKB|E1BYD9 - symbol:CHAF1A "Chromatin assembly fact... 188 2.0e-11 2
UNIPROTKB|F1P5R3 - symbol:CHAF1A "Chromatin assembly fact... 188 2.0e-11 2
UNIPROTKB|Q5R1T0 - symbol:CHAF1A "Chromatin assembly fact... 187 2.5e-11 2
UNIPROTKB|A6QLA6 - symbol:CHAF1A "Chromatin assembly fact... 182 1.0e-09 2
MGI|MGI:1351331 - symbol:Chaf1a "chromatin assembly facto... 189 1.0e-09 2
RGD|1590865 - symbol:Chaf1a "chromatin assembly factor 1,... 183 4.5e-09 2
UNIPROTKB|A0JMT0 - symbol:chaf1a-b "Chromatin assembly fa... 175 5.8e-09 2
UNIPROTKB|F1S7L7 - symbol:CHAF1A "Uncharacterized protein... 177 1.5e-08 3
UNIPROTKB|E2R2E3 - symbol:CHAF1A "Uncharacterized protein... 175 3.8e-08 3
ZFIN|ZDB-GENE-030131-5366 - symbol:chaf1a "chromatin asse... 165 1.0e-07 2
UNIPROTKB|Q13111 - symbol:CHAF1A "Chromatin assembly fact... 165 5.5e-07 2
UNIPROTKB|Q98TA5 - symbol:chaf1a-a "Chromatin assembly fa... 158 6.2e-07 2
WB|WBGene00011532 - symbol:chaf-1 species:6239 "Caenorhab... 136 1.9e-05 3
>TAIR|locus:2034183 [details] [associations]
symbol:FAS1 "FASCIATA 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0006334
"nucleosome assembly" evidence=IDA] [GO:0009934 "regulation of
meristem structural organization" evidence=IMP] [GO:0033186 "CAF-1
complex" evidence=IPI] [GO:0042393 "histone binding" evidence=ISS]
[GO:0031507 "heterochromatin assembly" evidence=RCA;IMP]
[GO:0006310 "DNA recombination" evidence=IEP;IMP] [GO:0006325
"chromatin organization" evidence=IDA] [GO:0008283 "cell
proliferation" evidence=IMP] [GO:0010026 "trichome differentiation"
evidence=IMP] [GO:0048366 "leaf development" evidence=IMP]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=RCA;IMP] [GO:0009555 "pollen development"
evidence=IGI;RCA] [GO:0045787 "positive regulation of cell cycle"
evidence=IGI;RCA] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006261 "DNA-dependent DNA replication" evidence=RCA]
[GO:0006270 "DNA replication initiation" evidence=RCA] [GO:0006275
"regulation of DNA replication" evidence=RCA] [GO:0006306 "DNA
methylation" evidence=RCA] [GO:0016444 "somatic cell DNA
recombination" evidence=RCA] [GO:0016568 "chromatin modification"
evidence=RCA] [GO:0031047 "gene silencing by RNA" evidence=RCA]
[GO:0051726 "regulation of cell cycle" evidence=RCA] EMBL:CP002684
GO:GO:0006355 GO:GO:0009555 GO:GO:0008283 GO:GO:0006260
GO:GO:0006351 EMBL:AC004512 GO:GO:0000724 GO:GO:0048366
GO:GO:0042393 GO:GO:0045787 GO:GO:0006334 GO:GO:0005678
GO:GO:0031507 GO:GO:0009934 KO:K10750 InterPro:IPR022043
Pfam:PF12253 EMBL:AC001229 EMBL:AB027229 EMBL:AY126994
IPI:IPI00525709 PIR:E96679 PIR:F96679 PIR:T02369 RefSeq:NP_176725.1
UniGene:At.20487 ProteinModelPortal:Q9SXY0 PRIDE:Q9SXY0
EnsemblPlants:AT1G65470.1 GeneID:842858 KEGG:ath:AT1G65470
TAIR:At1g65470 HOGENOM:HOG000082754 InParanoid:Q9SXY0 OMA:WETRDLK
PhylomeDB:Q9SXY0 ProtClustDB:CLSN2682151 Genevestigator:Q9SXY0
GO:GO:0010026 Uniprot:Q9SXY0
Length = 815
Score = 1734 (615.5 bits), Expect = 1.3e-178, P = 1.3e-178
Identities = 388/811 (47%), Positives = 509/811 (62%)
Query: 1 MADTTTMSNVEDR-----PSKTLKRKRAWPA---LTGEDKESRIRRFNEEVKWLFGYYKE 52
M + +T++ E+R P K KRKR A LT E+KES+I N E+K LF Y++E
Sbjct: 1 MDEVSTVNENENRKTMIEPKKLNKRKREPTAIENLTSEEKESQISSLNLEMKGLFDYFRE 60
Query: 53 MITNQRLTIDL----SECAGSLNGMVAALMEESELPLTKLVEEIHVKLKENGSEKLGVGL 108
++ + T DL SEC+ SLN MVA LMEE LPL+KLV+EI++KLKE +E V +
Sbjct: 61 VMDKSKRT-DLFSGFSECS-SLNSMVALLMEEMSLPLSKLVDEIYLKLKEK-TES--VTM 115
Query: 109 AAVKSAVLFVGQRVMYGVSNADTDILEDDAEASLWCWETRDVKLLPKSVRGSLRIRRTFR 168
AVKSAV+ VGQRV YGV N D D+LEDD+E+ LWCWETRD+K++P SVRG L++RRT R
Sbjct: 116 VAVKSAVVSVGQRVSYGVLNVDADVLEDDSESCLWCWETRDLKIMPSSVRGVLKLRRTCR 175
Query: 169 KKIHERITAVSAMITALQKSESDPSFINDLMKASKKLGKVLSEASIRVLVDSMLKKNGAE 228
KKIHERITAVSAM+ ALQ+ E++ + +DL KA++KLGK+LSE IR +D+M++KN +E
Sbjct: 176 KKIHERITAVSAMLAALQREETEKLWRSDLSKAAEKLGKILSEVDIRSFMDNMMQKNSSE 235
Query: 229 IVEKDAKREEKILIKQLXXXXXXXXXXXXXMDCEQQKEKLHSERELKRLQXXXXXXXXXX 288
+ EKD+KREEK+L+KQL M+ + KEKL E+E K LQ
Sbjct: 236 MAEKDSKREEKLLLKQLEKNRCEAEKEKKRMERQVLKEKLQQEKEQKLLQKAIVDENNKE 295
Query: 289 XXXXXXXXXQIRKQQEEADKEQRHRXXXXXXXXXXXXXXXXXSMMERFLKRSKILTSCQN 348
+I+KQQ+E++KEQ+ R S+MERFLK+SK + Q
Sbjct: 296 KEETESRK-RIKKQQDESEKEQKRREKEQAELKKQLQVQKQASIMERFLKKSKDSSLTQP 354
Query: 349 DESSPRAITSVLLSKNSEQLPEAVTKLVDSTLSSNDEINIDDIRRSHLSSWHRFGHFVRS 408
S L E V + +D+ S+ E +DDIRR H +SW + GH + S
Sbjct: 355 KLPSSEVTAQELSCTKHENEIGKVVQAIDNAFSTTCEATVDDIRREHFASWRQLGHLLSS 414
Query: 409 NRNQHWGIRRKPKTELFKELKL-TNRGLGHDDDLSMERSEDRCEAQTVXXXXXXXXXXXX 467
++ +HWG+RR+PK+ELF +LKL TN G+ D + +ME+ D CE
Sbjct: 415 SK-KHWGMRRQPKSELFPKLKLSTNSGVTSDGEPNMEKQGDGCEENNFDGRQCKPSSSNR 473
Query: 468 XXXXXXXRWKQLLQFDKSHRPAFYGIWPKKSHIVGPRHPLMKDPDLXXXXXXXXXXXXXX 527
R KQLLQFDKS RP FYGIWP +S +V PR PL KDP+L
Sbjct: 474 KKSR---RVKQLLQFDKSCRPGFYGIWPSQSQVVKPRRPLQKDPELDYEVDSDEEWEEEE 530
Query: 528 XXXXXXXXXKDGDE---EGCSKADDEDESEDGFFVPDGYLSEDEGVQVDRMEIDLSAEDT 584
KD DE EGCSKADDED+SED F VPDGYLSEDEGVQVDRM+ID S +D
Sbjct: 531 AGESLSDCEKDEDESLEEGCSKADDEDDSEDDFMVPDGYLSEDEGVQVDRMDIDPSEQDA 590
Query: 585 KSSPSYKQELESKESCALVRQRKYLSSLTEQALQKNQPLIILNLMHEKVPLLMAEDLSGT 644
++ S KQ+ ES E CAL++Q+K+L +LT+ AL+K QPLII NL HEKV LL A+DL GT
Sbjct: 591 NTTSS-KQDQESPEFCALLQQQKHLQNLTDHALKKTQPLIICNLTHEKVSLLAAKDLEGT 649
Query: 645 SNMEQKCLQALSIRPFPGDLHVEITV-DIMDDENEKD---CLSNGKGSTT---LISESDL 697
+EQ CL+AL +R FP +EI++ DI D++ E C + S + +I +SDL
Sbjct: 650 QKVEQICLRALMVRQFPWSSLIEISINDIQDEDQEASKFSCSQSTPPSNSKAKIIPDSDL 709
Query: 698 PAIVSVIQSCSTNMNKILEALQQKFPSISRAQLRNKVREISDFNFAENRWQVKREILIEL 757
+VS IQSCS +N+++E LQQKFP + + +LR KVREISDF ++RWQVK+E+L +L
Sbjct: 710 LTVVSTIQSCSQGINRVVETLQQKFPDVPKTKLRQKVREISDFE--DSRWQVKKEVLTKL 767
Query: 758 GYSP--DKNGGRA-KGIATFFSKRCLPPDGK 785
G SP DK G R K I+TFFSKRCLPP K
Sbjct: 768 GLSPSPDKGGKRLPKTISTFFSKRCLPPSTK 798
>UNIPROTKB|B2ZX90 [details] [associations]
symbol:FSM "Chromatin assembly factor 1 subunit FSM"
species:39947 "Oryza sativa Japonica Group" [GO:0007090 "regulation
of S phase of mitotic cell cycle" evidence=TAS] [GO:0010448
"vegetative meristem growth" evidence=IMP] [GO:0010449 "root
meristem growth" evidence=IMP] [GO:2000046 "regulation of G2 phase
of mitotic cell cycle" evidence=TAS] GO:GO:0005634 GO:GO:0006355
GO:GO:0006281 GO:GO:0006351 GO:GO:0016568 GO:GO:0010449
GO:GO:0006310 EMBL:AP008207 GO:GO:0007090 KO:K10750
InterPro:IPR022043 Pfam:PF12253 ProtClustDB:CLSN2682151
EMBL:AB360550 EMBL:AP003316 RefSeq:NP_001045079.1 UniGene:Os.60860
GeneID:4324973 KEGG:osa:4324973 Gramene:B2ZX90 eggNOG:NOG137149
GO:GO:2000046 GO:GO:0010448 Uniprot:B2ZX90
Length = 940
Score = 867 (310.3 bits), Expect = 3.6e-135, Sum P(2) = 3.6e-135
Identities = 226/592 (38%), Positives = 310/592 (52%)
Query: 230 VEKDAKREEKILIKQLXXXXXXXXXXXXXMDCEQQKEKLHSERELKRLQXXXXXXXXXXX 289
VEK+ K++EK + ++KE+ +++ ++ +
Sbjct: 341 VEKELKQKEKEEARMRKQQKKQQEEALREQK-RREKEEAEMKKQQRKQEEEAQKEQKRRE 399
Query: 290 XXXXXXXXQIRKQQEEADKEQRHRXXXXXXXXXXXXXXXXXSMMERFLKRSKILTSCQND 349
Q +KQQEEA+KEQ+ R SMMERF K K +
Sbjct: 400 KEEAETRKQQKKQQEEAEKEQKRREKEAVQLKKQLAIQKQASMMERFFKNKKDSEKLEKP 459
Query: 350 ESSPRAI-TSVLLSKNSEQLPEAVTKLVDSTLSSNDEINIDDIRRSHLSSWHRFGHFVRS 408
+ T+ + N E +P VT ++DS+ S + ++D+RR +S W + + RS
Sbjct: 460 GGKDSGVQTTDPCTTNKEVVP-LVTSIIDSSFSQKENWALEDLRRLQISGWQKLSSYNRS 518
Query: 409 NRNQHWGIRRKPKTELFKELKLTNRG-------LGHDDD----LSMERSEDRC--EAQTV 455
+R WGIR KPK E FKELKL L ++D LS E D+ + +
Sbjct: 519 SR---WGIRNKPKKEAFKELKLQKTSDNMLEEILSPNEDTCHNLSQENEPDKSANDVDML 575
Query: 456 XXXXXXXXXXXXXXXXXXXRWKQ-LLQFDKSHRPAFYGIWPKKSHIVGPRHPLMKDPDLX 514
K+ LLQFDKS+RPA+YG W KKS +VGPR PL DPDL
Sbjct: 576 PAVELQFHGTNHANPLPTRSIKRKLLQFDKSNRPAYYGTWRKKSAVVGPRCPLKMDPDLD 635
Query: 515 XXXXXXXXXXXXXXXXXXXXXXKDGDE--EGCSKADDEDESEDGFFVPDGYLSEDEGVQV 572
KD DE E SK DE ESED FFVPDGYLS++EG+Q+
Sbjct: 636 YEVDSDDEWEEEDPGESLSDCEKDNDEVMEEDSKITDE-ESEDSFFVPDGYLSDNEGIQI 694
Query: 573 DRMEIDLSAEDTKSSPSYKQELESKESCALVRQRKYLSSLTEQALQKNQPLIILNLMHEK 632
+ + +D E + S P E+E E AL+RQ+K L++LTEQAL+K+QPL+I NL HEK
Sbjct: 695 ESL-LDDKDEASSSPPDQCAEVE--EFRALLRQQKVLNTLTEQALRKSQPLVISNLTHEK 751
Query: 633 VPLLMAEDLSGTSNMEQKCLQALSIRPFPGDLHVEITV-DIMDDENEKDCLSNGKGS--- 688
LL A DL GTS +EQ CLQ LS+R PG +++ V D E+ N K S
Sbjct: 752 AELLTAGDLKGTSKIEQLCLQVLSMRICPGGATIDLPVIDSSSANAEETNQLNVKSSPAA 811
Query: 689 TTLISESDLPAIVSVIQSCSTNMNKILEALQQKFPSISRAQLRNKVREISDFNFAENRWQ 748
+ I ++DL IV VI SC +NK++E+L QKFP++S++QL+NKVREIS+F +NRWQ
Sbjct: 812 ASAIPDTDLAEIVKVIGSCRDGINKLVESLHQKFPNVSKSQLKNKVREISEF--VDNRWQ 869
Query: 749 VKREILIELGYSPDK-NGGRAKGIATFFSKRCLPPDGKSLNPNEASPLSSLK 799
VK+E+L +LG S + + K IAT+FSKRCLPP+ L ASP LK
Sbjct: 870 VKKEVLSKLGLSSSPASSKKPKSIATYFSKRCLPPEEAIL----ASPELRLK 917
Score = 478 (173.3 bits), Expect = 3.6e-135, Sum P(2) = 3.6e-135
Identities = 112/300 (37%), Positives = 171/300 (57%)
Query: 16 KTLKRKRA--WPALTGEDKESRIRRFNEEVKWLFGYYKEMITNQRLTIDLSECAGSLNGM 73
K LKRKRA PAL DK++ + +E++ L YY+E ++ R+ ++ S N
Sbjct: 82 KQLKRKRASSGPALAAADKDALVAGCCQELEGLLEYYRE-VSGHRMQFEVGNL--STNAA 138
Query: 74 VAALMEESELPLTKLVEEIHVKLKENGSEKLGVGLAAVKSAVLFVGQRVMYGVSNADTDI 133
+ L+EES L L+KLV+EI+ KLK G E GV +V+S+VL +GQR+MYG S+ D D+
Sbjct: 139 IGCLLEESSLGLSKLVDEIYEKLK--GME--GVSATSVRSSVLLIGQRMMYGQSSPDADV 194
Query: 134 LEDDAEASLWCWETRDVKLLPKSVRGSLRIRRTFRKKIHERITAVSAMITALQKSESDPS 193
LED++E +LWCWE RD+K++P +RG L RRT RKKIHERITA+ + ++ L+ ++
Sbjct: 195 LEDESETALWCWEVRDLKVIPLRMRGPLSTRRTARKKIHERITAIYSTLSVLEAPGAEAQ 254
Query: 194 FINDLMKASKKLGKVLSEASIRVLVDSMLKKNGAEIVEKDAKREEKILIKQLXXXXXXXX 253
+ND+ KAS KL K L+ I+ LV+ +K+ E K+ K ++++
Sbjct: 255 -VNDMRKASLKLSKALNLEGIKSLVERATQKSNIERGAKNTGSTAKEPMQEMVKSNNDTG 313
Query: 254 XXXXXMDCEQQKEKLHSERELKRLQXXXXXXXXXXXXXXXXXXXQIRKQQEEADKEQRHR 313
D + QK +E++ ++ Q Q +KQQEEA +EQ+ R
Sbjct: 314 IIENVDDSQLQKNTSTNEKDTQKAQKQVEKELKQKEKEEARMRKQQKKQQEEALREQKRR 373
>UNIPROTKB|E1BYD9 [details] [associations]
symbol:CHAF1A "Chromatin assembly factor 1 subunit A"
species:9031 "Gallus gallus" [GO:0031497 "chromatin assembly"
evidence=IEA] [GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0070087
"chromo shadow domain binding" evidence=IEA] [GO:0071778 "WINAC
complex" evidence=IEA] GO:GO:0031497 GO:GO:0071778 GO:GO:0033186
InterPro:IPR022043 Pfam:PF12253 GeneTree:ENSGT00440000034888
InterPro:IPR021644 Pfam:PF11600 EMBL:AADN02066695 IPI:IPI00822992
Ensembl:ENSGALT00000041157 ArrayExpress:E1BYD9 Uniprot:E1BYD9
Length = 934
Score = 188 (71.2 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 53/176 (30%), Positives = 81/176 (46%)
Query: 478 QLLQFDKSHRPAFYGIWPKKSHIVGPRHPLMKDPDLXXXXXXXXXXXXXXXXXXXXXXXK 537
+LLQF ++HRPA++G W KK+ ++ PR+P KD L +
Sbjct: 531 KLLQFCENHRPAYWGTWNKKTTMIRPRNPWSKDSKLLDYEVDSDEEWEEEEPGESLSHSE 590
Query: 538 DGDEEGCSKADDEDESEDGFFVPDGYLSEDEGVQVDRMEIDLSAEDTKSSPSYKQ--ELE 595
DEE + +DED+ +DGFFVP GYLSEDEGV E D + + K+ EL
Sbjct: 591 GDDEE---EGEDEDD-DDGFFVPHGYLSEDEGVTE---ECDPENQKVRQKLKAKEWDELM 643
Query: 596 SKESCALVRQRKYLSSLTEQALQKNQPLIILNLMHEKVPLLMAEDLSGTSNMEQKC 651
+K V Q + + E A + L ++ + ++ ++ QKC
Sbjct: 644 AKGKRLHVLQPVKIGCIWESAQNDSGTNADLKILQQFTACILDSSVAEEEQQIQKC 699
Score = 56 (24.8 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 24/104 (23%), Positives = 46/104 (44%)
Query: 175 ITAVSAMITALQKSESDPSFIND-LMKASKKLGKVLSEAS-IRVLVDSMLKKNGAEIVEK 232
+++ A A K + P ++ + K S+KL K +E +R+ D ++ ++ +
Sbjct: 264 VSSPEAQPVAETKRNTSPLAVSTPVRKVSQKLHKSSAEKEKLRLQRD---QERADKLQKL 320
Query: 233 DAKREEKILIKQLXXXXXXXXXXXXXMDCEQQKEKLHSERELKR 276
A+REEK +K+ E++KE ER K+
Sbjct: 321 QAEREEKGRLKEEAKAAKERAKEEAKKKKEEEKELKERERREKK 364
Score = 54 (24.1 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 25/99 (25%), Positives = 43/99 (43%)
Query: 127 SNADTDILEDDAEASLWCWETRDVKLLPKSVRGSLRIRRTFRKKIHERITAVSAMITALQ 186
S+A +D +E+D C DV +PK V G + +K + + +I ++
Sbjct: 59 SHASSDNMEND------CQLNSDVNFVPKLVNGKGPLDHFIQKSTKDNTDEIIVIIDSVD 112
Query: 187 KSESDPSFINDLMKASKKLGKVLSEASIRVLVDSMLKKN 225
ES+ +D+ S S+AS L + ML K+
Sbjct: 113 --ESNQRLSDDVDHVSFD-----SKASSAALTNGMLGKD 144
Score = 39 (18.8 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 9/37 (24%), Positives = 21/37 (56%)
Query: 361 LSKNSEQLPEAVTKLVDSTLSSNDEINIDDIRRSHLS 397
+ K+++ + + ++DS SN ++ DD+ H+S
Sbjct: 93 IQKSTKDNTDEIIVIIDSVDESNQRLS-DDV--DHVS 126
>UNIPROTKB|F1P5R3 [details] [associations]
symbol:CHAF1A "Chromatin assembly factor 1 subunit A"
species:9031 "Gallus gallus" [GO:0031497 "chromatin assembly"
evidence=IEA] [GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0070087
"chromo shadow domain binding" evidence=IEA] [GO:0071778 "WINAC
complex" evidence=IEA] GO:GO:0031497 GO:GO:0071778 GO:GO:0033186
InterPro:IPR022043 Pfam:PF12253 GeneTree:ENSGT00440000034888
OMA:HMVLAPR InterPro:IPR021644 Pfam:PF11600 EMBL:AADN02066695
IPI:IPI00971449 Ensembl:ENSGALT00000001695 ArrayExpress:F1P5R3
Uniprot:F1P5R3
Length = 937
Score = 188 (71.2 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 53/176 (30%), Positives = 81/176 (46%)
Query: 478 QLLQFDKSHRPAFYGIWPKKSHIVGPRHPLMKDPDLXXXXXXXXXXXXXXXXXXXXXXXK 537
+LLQF ++HRPA++G W KK+ ++ PR+P KD L +
Sbjct: 534 KLLQFCENHRPAYWGTWNKKTTMIRPRNPWSKDSKLLDYEVDSDEEWEEEEPGESLSHSE 593
Query: 538 DGDEEGCSKADDEDESEDGFFVPDGYLSEDEGVQVDRMEIDLSAEDTKSSPSYKQ--ELE 595
DEE + +DED+ +DGFFVP GYLSEDEGV E D + + K+ EL
Sbjct: 594 GDDEE---EGEDEDD-DDGFFVPHGYLSEDEGVTE---ECDPENQKVRQKLKAKEWDELM 646
Query: 596 SKESCALVRQRKYLSSLTEQALQKNQPLIILNLMHEKVPLLMAEDLSGTSNMEQKC 651
+K V Q + + E A + L ++ + ++ ++ QKC
Sbjct: 647 AKGKRLHVLQPVKIGCIWESAQNDSGTNADLKILQQFTACILDSSVAEEEQQIQKC 702
Score = 56 (24.8 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 24/104 (23%), Positives = 46/104 (44%)
Query: 175 ITAVSAMITALQKSESDPSFIND-LMKASKKLGKVLSEAS-IRVLVDSMLKKNGAEIVEK 232
+++ A A K + P ++ + K S+KL K +E +R+ D ++ ++ +
Sbjct: 267 VSSPEAQPVAETKRNTSPLAVSTPVRKVSQKLHKSSAEKEKLRLQRD---QERADKLQKL 323
Query: 233 DAKREEKILIKQLXXXXXXXXXXXXXMDCEQQKEKLHSERELKR 276
A+REEK +K+ E++KE ER K+
Sbjct: 324 QAEREEKGRLKEEAKAAKERAKEEAKKKKEEEKELKERERREKK 367
Score = 54 (24.1 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 25/99 (25%), Positives = 43/99 (43%)
Query: 127 SNADTDILEDDAEASLWCWETRDVKLLPKSVRGSLRIRRTFRKKIHERITAVSAMITALQ 186
S+A +D +E+D C DV +PK V G + +K + + +I ++
Sbjct: 62 SHASSDNMEND------CQLNSDVNFVPKLVNGKGPLDHFIQKSTKDNTDEIIVIIDSVD 115
Query: 187 KSESDPSFINDLMKASKKLGKVLSEASIRVLVDSMLKKN 225
ES+ +D+ S S+AS L + ML K+
Sbjct: 116 --ESNQRLSDDVDHVSFD-----SKASSAALTNGMLGKD 147
Score = 39 (18.8 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 9/37 (24%), Positives = 21/37 (56%)
Query: 361 LSKNSEQLPEAVTKLVDSTLSSNDEINIDDIRRSHLS 397
+ K+++ + + ++DS SN ++ DD+ H+S
Sbjct: 96 IQKSTKDNTDEIIVIIDSVDESNQRLS-DDV--DHVS 129
>UNIPROTKB|Q5R1T0 [details] [associations]
symbol:CHAF1A "Chromatin assembly factor 1 subunit A"
species:9031 "Gallus gallus" [GO:0006260 "DNA replication"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] GO:GO:0006355
GO:GO:0006260 GO:GO:0006281 GO:GO:0006351 GO:GO:0007049
GO:GO:0031497 KO:K10750 GO:GO:0033186 InterPro:IPR022043
Pfam:PF12253 CTD:10036 eggNOG:NOG267805 HOGENOM:HOG000111290
InterPro:IPR021644 Pfam:PF11600 EMBL:AB195692 EMBL:AJ720199
IPI:IPI00576234 RefSeq:NP_001073220.2 UniGene:Gga.3054 HSSP:Q9WZF7
ProteinModelPortal:Q5R1T0 STRING:Q5R1T0 GeneID:770217
KEGG:gga:770217 InParanoid:Q5R1T0 NextBio:20920440 Uniprot:Q5R1T0
Length = 937
Score = 187 (70.9 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 52/176 (29%), Positives = 81/176 (46%)
Query: 478 QLLQFDKSHRPAFYGIWPKKSHIVGPRHPLMKDPDLXXXXXXXXXXXXXXXXXXXXXXXK 537
+LLQF ++HRPA++G W KK+ ++ PR+P KD L +
Sbjct: 534 KLLQFCENHRPAYWGTWNKKTTMIRPRNPWSKDSKLLDYEVDSDEEWEEEEPGESLSHSE 593
Query: 538 DGDEEGCSKADDEDESEDGFFVPDGYLSEDEGVQVDRMEIDLSAEDTKSSPSYKQ--ELE 595
DEE + +DED+ +DGFF+P GYLSEDEGV E D + + K+ EL
Sbjct: 594 GDDEE---EGEDEDD-DDGFFIPHGYLSEDEGVTE---ECDPENQKVRQKLKAKEWDELM 646
Query: 596 SKESCALVRQRKYLSSLTEQALQKNQPLIILNLMHEKVPLLMAEDLSGTSNMEQKC 651
+K V Q + + E A + L ++ + ++ ++ QKC
Sbjct: 647 AKGKRLHVLQPVKIGCIWESAQNDSGTNADLKILQQFTACILDSSVAEEEQQIQKC 702
Score = 56 (24.8 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 24/104 (23%), Positives = 46/104 (44%)
Query: 175 ITAVSAMITALQKSESDPSFIND-LMKASKKLGKVLSEAS-IRVLVDSMLKKNGAEIVEK 232
+++ A A K + P ++ + K S+KL K +E +R+ D ++ ++ +
Sbjct: 267 VSSPEAQPVAETKRNTSPLAVSTPVRKVSQKLHKSSAEKEKLRLQRD---QERADKLQKL 323
Query: 233 DAKREEKILIKQLXXXXXXXXXXXXXMDCEQQKEKLHSERELKR 276
A+REEK +K+ E++KE ER K+
Sbjct: 324 QAEREEKGRLKEEAKAAKERAKEEAKKKKEEEKELKERERREKK 367
Score = 54 (24.1 bits), Expect = 4.1e-11, Sum P(2) = 4.1e-11
Identities = 25/98 (25%), Positives = 42/98 (42%)
Query: 128 NADTDILEDDAEASLWCWETRDVKLLPKSVRGSLRIRRTFRKKIHERITAVSAMITALQK 187
+A TD +E+D C DV +PK V G + +K + + +I ++
Sbjct: 63 HASTDNMEND------CQLNSDVNFVPKLVNGKGPLDHFIQKSTKDNTDEIIVIIDSVD- 115
Query: 188 SESDPSFINDLMKASKKLGKVLSEASIRVLVDSMLKKN 225
ES+ +D+ S S+AS L + ML K+
Sbjct: 116 -ESNQRLSDDVDHVSFD-----SKASSAALTNGMLGKD 147
Score = 39 (18.8 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 9/37 (24%), Positives = 21/37 (56%)
Query: 361 LSKNSEQLPEAVTKLVDSTLSSNDEINIDDIRRSHLS 397
+ K+++ + + ++DS SN ++ DD+ H+S
Sbjct: 96 IQKSTKDNTDEIIVIIDSVDESNQRLS-DDV--DHVS 129
>UNIPROTKB|A6QLA6 [details] [associations]
symbol:CHAF1A "Chromatin assembly factor 1 subunit A"
species:9913 "Bos taurus" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0071778
"WINAC complex" evidence=IEA] [GO:0070087 "chromo shadow domain
binding" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] GO:GO:0006355 GO:GO:0006260
GO:GO:0006281 GO:GO:0006351 GO:GO:0007049 GO:GO:0031497
GO:GO:0071778 KO:K10750 GO:GO:0033186 InterPro:IPR022043
Pfam:PF12253 CTD:10036 EMBL:BC147896 IPI:IPI00867256
RefSeq:NP_001095312.1 UniGene:Bt.42253 STRING:A6QLA6
Ensembl:ENSBTAT00000010763 GeneID:504535 KEGG:bta:504535
eggNOG:NOG267805 GeneTree:ENSGT00440000034888 HOGENOM:HOG000111290
InParanoid:A6QLA6 OMA:HMVLAPR OrthoDB:EOG4F4SB3 NextBio:20866713
InterPro:IPR021644 Pfam:PF11600 Uniprot:A6QLA6
Length = 964
Score = 182 (69.1 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 39/93 (41%), Positives = 53/93 (56%)
Query: 478 QLLQFDKSHRPAFYGIWPKKSHIVGPRHPLMKDPDLXXXXXXXXXXXXXXXXXXXXXXXK 537
+LLQF ++HRPA++G W KK+ ++ PR P +D DL
Sbjct: 560 KLLQFSENHRPAYWGTWNKKTTVIRPRDPWAQDRDLLDYEVDSDEEWEEEEPGESLSHS- 618
Query: 538 DGDEEGCSKADDEDESEDGFFVPDGYLSEDEGV 570
+GD++ +DEDE +DGFFVP GYLSEDEGV
Sbjct: 619 EGDDDD-DVGEDEDE-DDGFFVPHGYLSEDEGV 649
Score = 46 (21.3 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 15/65 (23%), Positives = 31/65 (47%)
Query: 723 PSISRAQLRNKVREISDFNFAENRWQVKREILIELGYSPDKNGGRAKGIATFFSKRCL-- 780
P + + + K +E +F R+++ + + I ++ DK+GG + F+ CL
Sbjct: 656 PENHKVRQKLKAKEWDEFLAKGKRFRILQPVKIGCIWAADKDGGADLKVLQQFTA-CLLE 714
Query: 781 --PPD 783
PP+
Sbjct: 715 TVPPE 719
>MGI|MGI:1351331 [details] [associations]
symbol:Chaf1a "chromatin assembly factor 1, subunit A
(p150)" species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0031497
"chromatin assembly" evidence=ISO] [GO:0033186 "CAF-1 complex"
evidence=ISO] [GO:0070087 "chromo shadow domain binding"
evidence=ISO] [GO:0071778 "WINAC complex" evidence=ISO]
MGI:MGI:1351331 GO:GO:0006355 GO:GO:0006260 GO:GO:0006281
GO:GO:0006351 GO:GO:0007049 GO:GO:0031497 GO:GO:0071778 KO:K10750
GO:GO:0033186 InterPro:IPR022043 Pfam:PF12253 CTD:10036
GeneTree:ENSGT00440000034888 HOGENOM:HOG000111290 OMA:HMVLAPR
OrthoDB:EOG4F4SB3 InterPro:IPR021644 Pfam:PF11600 eggNOG:NOG259938
HOVERGEN:HBG050779 EMBL:AJ132771 EMBL:AK034839 EMBL:AK161016
EMBL:CH466559 EMBL:BC053740 IPI:IPI00133839 RefSeq:NP_038761.1
UniGene:Mm.391010 PDB:1S4Z PDBsum:1S4Z ProteinModelPortal:Q9QWF0
SMR:Q9QWF0 IntAct:Q9QWF0 STRING:Q9QWF0 PhosphoSite:Q9QWF0
PRIDE:Q9QWF0 Ensembl:ENSMUST00000002914 GeneID:27221 KEGG:mmu:27221
UCSC:uc008dar.1 InParanoid:Q544M2 ChiTaRS:CHAF1A
EvolutionaryTrace:Q9QWF0 NextBio:305130 Bgee:Q9QWF0
CleanEx:MM_CHAF1A Genevestigator:Q9QWF0
GermOnline:ENSMUSG00000002835 Uniprot:Q9QWF0
Length = 911
Score = 189 (71.6 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 41/93 (44%), Positives = 54/93 (58%)
Query: 478 QLLQFDKSHRPAFYGIWPKKSHIVGPRHPLMKDPDLXXXXXXXXXXXXXXXXXXXXXXXK 537
+LLQF ++HRPA++G W KK+ I+ PR+P +D DL
Sbjct: 537 KLLQFSENHRPAYWGTWNKKTAIIRPRNPWAQDKDLLDYEVDSDDEWEEEEPGESLSHS- 595
Query: 538 DGDEEGCSKADDEDESEDGFFVPDGYLSEDEGV 570
+GDE+ +DEDE +DGFFVP GYLSEDEGV
Sbjct: 596 EGDEDD-DVGEDEDE-DDGFFVPHGYLSEDEGV 626
Score = 38 (18.4 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 262 EQQKEKLHSERELKR 276
E+ + KLH +RE +R
Sbjct: 312 EKGRSKLHRDREQQR 326
>RGD|1590865 [details] [associations]
symbol:Chaf1a "chromatin assembly factor 1, subunit A (p150)"
species:10116 "Rattus norvegicus" [GO:0031497 "chromatin assembly"
evidence=ISO] [GO:0033186 "CAF-1 complex" evidence=ISO] [GO:0070087
"chromo shadow domain binding" evidence=ISO] [GO:0071778 "WINAC
complex" evidence=ISO] REFSEQ:XM_001061702 Ncbi:XP_001061702
Length = 907
Score = 183 (69.5 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 39/93 (41%), Positives = 54/93 (58%)
Query: 478 QLLQFDKSHRPAFYGIWPKKSHIVGPRHPLMKDPDLXXXXXXXXXXXXXXXXXXXXXXXK 537
+LLQF ++HRPA++G W KK+ ++ PR+P ++D L
Sbjct: 530 KLLQFSENHRPAYWGTWNKKTAVIRPRNPWVQDKKLLDYEVDSDDEWEEEEPGESLSHS- 588
Query: 538 DGDEEGCSKADDEDESEDGFFVPDGYLSEDEGV 570
+GDE+ +DEDE +DGFFVP GYLSEDEGV
Sbjct: 589 EGDEDD-DVGEDEDE-DDGFFVPHGYLSEDEGV 619
Score = 38 (18.4 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 262 EQQKEKLHSERELKR 276
E+ K KLH ++E +R
Sbjct: 312 EKGKSKLHRDKEQQR 326
>UNIPROTKB|A0JMT0 [details] [associations]
symbol:chaf1a-b "Chromatin assembly factor 1 subunit A-B"
species:8355 "Xenopus laevis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS]
GO:GO:0006355 GO:GO:0006260 GO:GO:0006281 GO:GO:0006351
GO:GO:0007049 GO:GO:0031497 KO:K10750 GO:GO:0033186
InterPro:IPR022043 Pfam:PF12253 EMBL:BC125993 RefSeq:NP_001089089.1
UniGene:Xl.54092 GeneID:733264 KEGG:xla:733264 CTD:10036
Xenbase:XB-GENE-1001158 Uniprot:A0JMT0
Length = 885
Score = 175 (66.7 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09
Identities = 41/121 (33%), Positives = 62/121 (51%)
Query: 478 QLLQFDKSHRPAFYGIWPKKSHIVGPRHPLMKDPDLXXXXXXXXXXXXXXXXXXXXXXXK 537
+LLQF ++HRPA++G K+S ++ PR P +D D+
Sbjct: 496 KLLQFCENHRPAYWGTSNKRSRVINPRKPWAQDTDMLDYEVDSDEEWEEEEPGESLSHS- 554
Query: 538 DGDEEGCSKADDEDESEDGFFVPDGYLSEDEGVQVDRMEIDLSAEDTKSSPSYKQELESK 597
+G+ E ++EDE +DGFFVP GYLS DEGV D D ++ +Q+L++K
Sbjct: 555 EGENEDDDPKEEEDEDDDGFFVPHGYLSNDEGVS------DEECTDPENQ-KVRQKLKAK 607
Query: 598 E 598
E
Sbjct: 608 E 608
Score = 45 (20.9 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09
Identities = 20/92 (21%), Positives = 34/92 (36%)
Query: 223 KKNGAEIVEKDAKREEKILIKQLXXXXXXXXXXXXXMDCEQQKEKLHSER-ELKRLQXXX 281
+K AE E++ R E K L D +++KE+ E+ E RL+
Sbjct: 266 EKRQAEKEERECARREARAAKDLAKKKREGEREQREKDKKEKKEREDREKAEKNRLKEEK 325
Query: 282 XXXXXXXXXXXXXXXXQIRKQQEEADKEQRHR 313
+K++E+ KE+ R
Sbjct: 326 KKEKLEALEAKQEEKR--KKEEEKRQKEEEKR 355
Score = 42 (19.8 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 11/38 (28%), Positives = 21/38 (55%)
Query: 185 LQKSESDPSFINDLMKAS-KKLGKVLSEASIRVLVDSM 221
LQ+ S+ SF++++ K +K+G+ V VD +
Sbjct: 424 LQEQTSESSFLDEIKKRRPRKMGQTTVPTINSVEVDDV 461
>UNIPROTKB|F1S7L7 [details] [associations]
symbol:CHAF1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071778 "WINAC complex" evidence=IEA] [GO:0070087
"chromo shadow domain binding" evidence=IEA] [GO:0033186 "CAF-1
complex" evidence=IEA] [GO:0031497 "chromatin assembly"
evidence=IEA] GO:GO:0031497 GO:GO:0071778 KO:K10750 GO:GO:0033186
InterPro:IPR022043 Pfam:PF12253 GeneTree:ENSGT00440000034888
OMA:HMVLAPR InterPro:IPR021644 Pfam:PF11600 EMBL:CU972396
RefSeq:XP_003123116.1 UniGene:Ssc.7857 Ensembl:ENSSSCT00000014756
GeneID:100524302 KEGG:ssc:100524302 Uniprot:F1S7L7
Length = 963
Score = 177 (67.4 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 38/93 (40%), Positives = 53/93 (56%)
Query: 478 QLLQFDKSHRPAFYGIWPKKSHIVGPRHPLMKDPDLXXXXXXXXXXXXXXXXXXXXXXXK 537
+LLQF ++HRPA++G W KK+ ++ PR P +D +L
Sbjct: 559 KLLQFSENHRPAYWGTWNKKTTVIHPRDPWAQDRNLLDYEVDSDEEWEEEEPGESLSHS- 617
Query: 538 DGDEEGCSKADDEDESEDGFFVPDGYLSEDEGV 570
+GD++ +DEDE +DGFFVP GYLSEDEGV
Sbjct: 618 EGDDDD-DVGEDEDE-DDGFFVPHGYLSEDEGV 648
Score = 43 (20.2 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 18/98 (18%), Positives = 42/98 (42%)
Query: 176 TAVSAMITALQKSESDPSFINDLMKASKKLGKVLSEASIRVLVDSMLKKNGAEIVEKDAK 235
T + M L K ++ + + L + ++LGK L + + + + ++ E K
Sbjct: 317 TPIRRMSNKLLKGSAEKNKMR-LQRDKERLGKQLKLRAEKEEKEKLREEAKRAKEEAKKK 375
Query: 236 REEKILIKQLXXXXXXXXXXXXXMDCEQQKEKLHSERE 273
+EE+ +K+ + +++KE+ ER+
Sbjct: 376 KEEEKELKERERREKREKDEKEKAEKQRRKEERRKERQ 413
Score = 41 (19.5 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 13/58 (22%), Positives = 28/58 (48%)
Query: 723 PSISRAQLRNKVREISDFNFAENRWQVKREILIELGYSPDKNGGRAKGIATFFSKRCL 780
P + + + K +E +F R++V + + I ++ +K+GG + F+ CL
Sbjct: 655 PENHKVRQKLKAKEWDEFLAKGKRFRVLQPVKIGCIWASNKDGGADLKVLQQFTA-CL 711
>UNIPROTKB|E2R2E3 [details] [associations]
symbol:CHAF1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071778 "WINAC complex" evidence=IEA]
[GO:0070087 "chromo shadow domain binding" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0031497 "chromatin
assembly" evidence=IEA] GO:GO:0031497 GO:GO:0071778 GO:GO:0033186
InterPro:IPR022043 Pfam:PF12253 InterPro:IPR021644 Pfam:PF11600
Ensembl:ENSCAFT00000030285 Uniprot:E2R2E3
Length = 964
Score = 175 (66.7 bits), Expect = 3.8e-08, Sum P(3) = 3.8e-08
Identities = 38/93 (40%), Positives = 52/93 (55%)
Query: 478 QLLQFDKSHRPAFYGIWPKKSHIVGPRHPLMKDPDLXXXXXXXXXXXXXXXXXXXXXXXK 537
+LLQF ++HRPA++G W KK+ ++ PR P +D L
Sbjct: 560 KLLQFSENHRPAYWGTWNKKTTVIHPRDPWAQDRKLLDYEVDSDEEWEEEEPGESLSHS- 618
Query: 538 DGDEEGCSKADDEDESEDGFFVPDGYLSEDEGV 570
+GD++ +DEDE +DGFFVP GYLSEDEGV
Sbjct: 619 EGDDDD-EVGEDEDE-DDGFFVPHGYLSEDEGV 649
Score = 41 (19.5 bits), Expect = 3.8e-08, Sum P(3) = 3.8e-08
Identities = 13/58 (22%), Positives = 28/58 (48%)
Query: 723 PSISRAQLRNKVREISDFNFAENRWQVKREILIELGYSPDKNGGRAKGIATFFSKRCL 780
P + + + K +E +F R++V + + I ++ +K+GG + F+ CL
Sbjct: 656 PENHKVRQKLKAKEWDEFLAKGKRFRVLQPVKIGCIWAANKDGGADLKVLQQFTA-CL 712
Score = 41 (19.5 bits), Expect = 3.8e-08, Sum P(3) = 3.8e-08
Identities = 24/104 (23%), Positives = 44/104 (42%)
Query: 180 AMITALQKSESDPSFINDLMKASKKLGK----VLSEASIRVLVDSMLKKNGAEIVEKDAK 235
++++ + S P+ + ASKK S IR + ++K + AE + +
Sbjct: 283 SVLSHSSRGSSSPTSSPEGQSASKKQHSSPRPFPSSTPIRRITKKLIKAS-AEKDKLRLQ 341
Query: 236 REEKILIKQLXXXXXXXXXXXXXMDC----EQQKEKLHSERELK 275
R+++ L KQL + E+ K+K E+ELK
Sbjct: 342 RDKERLGKQLKLRAEKEEKEKLKEEAKRAKEEAKKKKEEEKELK 385
Score = 37 (18.1 bits), Expect = 9.6e-08, Sum P(3) = 9.6e-08
Identities = 14/72 (19%), Positives = 34/72 (47%)
Query: 169 KKIHERITAVSAMITALQKSESDPSFINDL-MKASKKLGKVLSEASIRVLVDSMLKKNGA 227
++I +++ SA L+ L ++A K+ + L E + R ++ KK
Sbjct: 322 RRITKKLIKASAEKDKLRLQRDKERLGKQLKLRAEKEEKEKLKEEAKRAKEEAKKKKEEE 381
Query: 228 EIVEKDAKREEK 239
+ +++ +RE++
Sbjct: 382 KELKEKERREKR 393
>ZFIN|ZDB-GENE-030131-5366 [details] [associations]
symbol:chaf1a "chromatin assembly factor 1,
subunit A (p150)" species:7955 "Danio rerio" [GO:0033186 "CAF-1
complex" evidence=ISS] [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA]
ZFIN:ZDB-GENE-030131-5366 GO:GO:0006355 GO:GO:0006260 GO:GO:0006281
GO:GO:0006351 GO:GO:0007049 GO:GO:0031497 KO:K10750 GO:GO:0033186
InterPro:IPR022043 Pfam:PF12253 CTD:10036 eggNOG:NOG267805
GeneTree:ENSGT00440000034888 HOGENOM:HOG000111290 EMBL:BX005201
EMBL:BC125916 IPI:IPI00932972 RefSeq:NP_001038478.2
UniGene:Dr.72843 STRING:A0JMK9 Ensembl:ENSDART00000111711
Ensembl:ENSDART00000142027 GeneID:563212 KEGG:dre:563212
InParanoid:A0JMK9 OMA:QGNSPTT NextBio:20884788 Bgee:A0JMK9
Uniprot:A0JMK9
Length = 863
Score = 165 (63.1 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 41/123 (33%), Positives = 60/123 (48%)
Query: 478 QLLQFDKSHRPAFYGIWPKKSHIVGPRHPLMKDPDLXXXXXXXXXXXXXXXXXXXXXXXK 537
+LL F ++RPA++G W KKS + PR PL D DL
Sbjct: 472 KLLHFHDNYRPAYWGTWSKKSTHISPRCPLRLDKDLLDYEVDSDEEWEEEEPGESLSHS- 530
Query: 538 DGDEEGCSKADDEDESEDGFFVPDGYLSEDEGVQVDRMEIDLSAEDTKS---SPSYKQEL 594
+GD++ +A ++D+ +DGFFVP GYLSE EG D D + + + ++ EL
Sbjct: 531 EGDDD--DEAGEDDDDDDGFFVPHGYLSEGEGALEDEEGGDPEKQKVRQRMKAREWENEL 588
Query: 595 ESK 597
SK
Sbjct: 589 MSK 591
Score = 43 (20.2 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 43/229 (18%), Positives = 80/229 (34%)
Query: 188 SESDPSFINDLMKASKKLGKVLSEASIRVLVDSMLKKNGAEIV----EKDAKREEKILIK 243
S S S I + SK + S R+ + +K+ + V EK +R+EK +K
Sbjct: 212 STSSASVIASSPEPSKSAPTTPASTS-RINAANKVKRRSLKSVQEQEEKQRQRDEKERLK 270
Query: 244 Q-LXXXXXXXXXXXXXMDCEQQKEKLHSERELKRLQXXXXXXXXXXXXXXXXXXXQIRKQ 302
Q M E+++EK + + ++ + + R+
Sbjct: 271 QEAKAAKEKKKEEARKMKEEKEREKKEKKEKDEKERREKKERDEKEKADKLKAKEEQRQM 330
Query: 303 QEEAD-KEQRHRXXXXXXXXXXXXXXXXXSMMERFLKRSKILTSCQNDESSPRAITSVLL 361
+ EA +E+R + + + RFL++ K + + S+ +
Sbjct: 331 KIEAKLEEKRKKEEEKRLKEEKDRIKAEKAEITRFLQKPKTQLAPKTLASACGKFAPFEI 390
Query: 362 SKNSEQLPEAVTKLVDSTLSSNDE-INIDDIRRSHLSSWHRFGHFVRSN 409
+ P + DS L D + D + L W GH RS+
Sbjct: 391 KAHMSLAPLTRVQCEDSVLEDLDRYLAQPDSTLNGLKDWT--GHKPRSS 437
>UNIPROTKB|Q13111 [details] [associations]
symbol:CHAF1A "Chromatin assembly factor 1 subunit A"
species:9606 "Homo sapiens" [GO:0006260 "DNA replication"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0033186 "CAF-1 complex"
evidence=IDA] [GO:0031497 "chromatin assembly" evidence=IDA]
[GO:0003682 "chromatin binding" evidence=TAS] [GO:0051082 "unfolded
protein binding" evidence=TAS] [GO:0006335 "DNA
replication-dependent nucleosome assembly" evidence=TAS]
[GO:0006461 "protein complex assembly" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0070087 "chromo shadow domain
binding" evidence=IPI] [GO:0071778 "WINAC complex" evidence=IDA]
GO:GO:0006461 GO:GO:0006355 GO:GO:0006260 GO:GO:0051082
GO:GO:0006281 GO:GO:0006351 GO:GO:0003682 GO:GO:0007049
GO:GO:0006335 GO:GO:0071778 KO:K10750 GO:GO:0033186
InterPro:IPR022043 Pfam:PF12253 CTD:10036 HOGENOM:HOG000111290
OMA:HMVLAPR OrthoDB:EOG4F4SB3 InterPro:IPR021644 Pfam:PF11600
EMBL:AF190465 EMBL:AC011498 EMBL:BC052620 EMBL:BC067093 EMBL:U20979
IPI:IPI00023177 IPI:IPI00219363 IPI:IPI00219364 PIR:A56731
RefSeq:NP_005474.2 UniGene:Hs.79018 ProteinModelPortal:Q13111
DIP:DIP-31135N IntAct:Q13111 MINT:MINT-2806241 STRING:Q13111
PhosphoSite:Q13111 DMDM:229462842 PaxDb:Q13111 PRIDE:Q13111
Ensembl:ENST00000301280 GeneID:10036 KEGG:hsa:10036 UCSC:uc002mal.3
GeneCards:GC19P004353 HGNC:HGNC:1910 HPA:CAB015186 MIM:601246
neXtProt:NX_Q13111 PharmGKB:PA26446 eggNOG:NOG259938
HOVERGEN:HBG050779 InParanoid:Q13111 GenomeRNAi:10036 NextBio:37903
PMAP-CutDB:Q13111 ArrayExpress:Q13111 Bgee:Q13111 CleanEx:HS_CHAF1A
Genevestigator:Q13111 GermOnline:ENSG00000167670 Uniprot:Q13111
Length = 956
Score = 165 (63.1 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 37/93 (39%), Positives = 51/93 (54%)
Query: 478 QLLQFDKSHRPAFYGIWPKKSHIVGPRHPLMKDPDLXXXXXXXXXXXXXXXXXXXXXXXK 537
+LLQF ++HRPA++G W KK+ ++ R P +D L
Sbjct: 558 KLLQFCENHRPAYWGTWNKKTALIRARDPWAQDTKLLDYEVDSDEEWEEEEPGESLSHS- 616
Query: 538 DGDEEGCSKADDEDESEDGFFVPDGYLSEDEGV 570
+GD++ +DEDE +DGFFVP GYLSEDEGV
Sbjct: 617 EGDDDD-DMGEDEDE-DDGFFVPHGYLSEDEGV 647
Score = 37 (18.1 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 15/76 (19%), Positives = 32/76 (42%)
Query: 198 LMKASKKLGKVLSEASIRVLVDSMLKKNGAEIVEKDAKREEKILIKQLXXXXXXXXXXXX 257
L + ++LGK L + R + + ++ E K+EE+ +K+
Sbjct: 337 LQRDQERLGKQLKLRAEREEKEKLKEEAKRAKEEAKKKKEEEKELKEKERREKREKDEKE 396
Query: 258 XMDCEQQKEKLHSERE 273
+ ++ KE+ ER+
Sbjct: 397 KAEKQRLKEERRKERQ 412
>UNIPROTKB|Q98TA5 [details] [associations]
symbol:chaf1a-a "Chromatin assembly factor 1 subunit A-A"
species:8355 "Xenopus laevis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS]
GO:GO:0006355 GO:GO:0006260 GO:GO:0006281 GO:GO:0006351
GO:GO:0007049 GO:GO:0031497 EMBL:AF222339 RefSeq:NP_001082096.1
UniGene:Xl.7155 ProteinModelPortal:Q98TA5 MINT:MINT-2842100
GeneID:398222 KEGG:xla:398222 KO:K10750 GO:GO:0033186
InterPro:IPR022043 Pfam:PF12253 Uniprot:Q98TA5
Length = 896
Score = 158 (60.7 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 39/121 (32%), Positives = 62/121 (51%)
Query: 478 QLLQFDKSHRPAFYGIWPKKSHIVGPRHPLMKDPDLXXXXXXXXXXXXXXXXXXXXXXXK 537
+LLQF ++HRPA++G ++S ++ R P +D +
Sbjct: 511 KLLQFCENHRPAYWGTCNRRSRVINSRKPWAQDTGMLDYEVDSDEEWEEEEPGESLSHS- 569
Query: 538 DGDEEGCSKADDEDESEDGFFVPDGYLSEDEGVQVDRMEIDLSAEDTKSSPSYKQELESK 597
+G+ + K DDED+ DGFFVP GYLS+DEGV D D ++ ++Q+L++K
Sbjct: 570 EGENDDDPKEDDEDD--DGFFVPHGYLSDDEGVS------DEECTDPENQ-KFRQKLKAK 620
Query: 598 E 598
E
Sbjct: 621 E 621
Score = 43 (20.2 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 20/81 (24%), Positives = 32/81 (39%)
Query: 198 LMKASKKLGKVLSEASIRVLVDSMLKKNGAEIVEKDAKREEKILIKQLXXXXXXXXXXXX 257
L +K GK SE+S + ++ E EK +EEK K
Sbjct: 294 LKNLQRKRGKT-SESSGKEYKKEKKEREDKEKAEKMKLKEEKKREKLEALEAKQEEKRKK 352
Query: 258 XMDCEQQKEKLHSERELKRLQ 278
+ Q++E+ + E KRL+
Sbjct: 353 DEEKRQKEEEKRQKEEEKRLK 373
Score = 37 (18.1 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 6/14 (42%), Positives = 11/14 (78%)
Query: 300 RKQQEEADKEQRHR 313
+ +Q +A+KE+R R
Sbjct: 264 KDKQRQAEKEERER 277
>WB|WBGene00011532 [details] [associations]
symbol:chaf-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] GO:GO:0009792 KO:K10750 InterPro:IPR022043
Pfam:PF12253 GeneTree:ENSGT00440000034888 EMBL:AL110471
RefSeq:NP_492440.1 ProteinModelPortal:Q9U380 MINT:MINT-3384745
PaxDb:Q9U380 EnsemblMetazoa:T06D10.2 GeneID:172730
KEGG:cel:CELE_T06D10.2 UCSC:T06D10.2.1 CTD:172730 WormBase:T06D10.2
eggNOG:NOG277253 HOGENOM:HOG000019657 InParanoid:Q9U380 OMA:WEDEPSD
NextBio:876769 Uniprot:Q9U380
Length = 479
Score = 136 (52.9 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 35/121 (28%), Positives = 53/121 (43%)
Query: 478 QLLQFDKSHRPAFYGIWPKKSHIVGPRHPLMKDPDLXXXXXXXXXXXXXXXXXXXXXXXK 537
+L QF + RP +YG W KKS IV PL ++ +
Sbjct: 301 KLFQFHGNRRPQYYGTWRKKSKIVSGSCPLAEE--IGIDYNVVSDDEWEDEPSDGEECNS 358
Query: 538 DGDEEGCSKADDEDESEDGFFVPDGYLSEDEGVQVDRMEIDLSAEDTKSSPSYKQELESK 597
D D E + DD E +DGFFVP YLS+ EG + + D++ + K + ++S
Sbjct: 359 DDDAEKDNDDDDGGEEDDGFFVPPCYLSDGEGDEDSTSDNDIAGDKKKEKQPKRITIDSD 418
Query: 598 E 598
+
Sbjct: 419 D 419
Score = 43 (20.2 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 34/178 (19%), Positives = 73/178 (41%)
Query: 146 ETRDVKLLPKSVRGSLRIRRTFRKKIHERI--TAVSAMITALQKSESDPSFINDLMKASK 203
ET + P +G R+ +T +K +++ + S+ + ++ S++ P + + S
Sbjct: 17 ETNENSCDPNQ-KGVKRVAQTPPEKDAKKVKLSRDSSNQSVIELSDTSPQ--KETSQQSP 73
Query: 204 KLGKV-LSEASIRVLVDSMLKKNGAEIVEKDAKREEKILIKQLXXXXXXXXXXXXXMDCE 262
K K + + +V + K+ ++ E++ +R E+ I + +D E
Sbjct: 74 KAPKTPKTPKTPKVSREEREKQKREKMEEREKQRIERERILEEKRLEKDKLAEEKRLDKE 133
Query: 263 Q-QKEKLHSE------RELKRLQXXXXXXXXXXXXXXXXXXXQIRKQQEEADKEQRHR 313
+ +KE+L + +E KR + RK++EE KE + R
Sbjct: 134 KKEKERLDKKLEEDKKKEEKRKEAEEKKKKDEEEKMKKDEERNKRKKEEEEKKEAKRR 191
Score = 41 (19.5 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 8/13 (61%), Positives = 9/13 (69%)
Query: 668 ITVDIMDDENEKD 680
IT+D DDEN D
Sbjct: 413 ITIDSDDDENSTD 425
Score = 39 (18.8 bits), Expect = 4.8e-05, Sum P(3) = 4.8e-05
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 77 LMEESELPLTKLVEEIHVKLKENGSEKL 104
++EE L KL EE + ++ E+L
Sbjct: 113 ILEEKRLEKDKLAEEKRLDKEKKEKERL 140
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.130 0.369 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 815 724 0.00086 121 3 11 23 0.44 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 15
No. of states in DFA: 624 (66 KB)
Total size of DFA: 365 KB (2181 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 69.45u 0.10s 69.55t Elapsed: 00:00:03
Total cpu time: 69.45u 0.10s 69.55t Elapsed: 00:00:03
Start: Tue May 21 14:44:03 2013 End: Tue May 21 14:44:06 2013