BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003504
(815 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 104/319 (32%), Positives = 166/319 (52%), Gaps = 32/319 (10%)
Query: 495 LLNITFADLLSATSNFDRGTLLAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQ-EAAR 553
L + +L A+ NF +L G FG VY+G L G VAVK L T + +
Sbjct: 17 LKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQT 76
Query: 554 ELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXX 613
E+E + H NL+ L G+C+ +R+ +Y YM NG++ + L + P
Sbjct: 77 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERP-------------- 122
Query: 614 XXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMN 673
S+ L W R +IALG+AR LA+LH C P IIHRD+KA+++ LD
Sbjct: 123 -----------ESQPPLD-WPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEE 170
Query: 674 LEPRLSDFGLAKI--FGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLEL 731
E + DFGLAK+ + + RG G+I PE+ + K+DV+ YGV+LLEL
Sbjct: 171 FEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLSTGK--SSEKTDVFGYGVMLLEL 228
Query: 732 ITGKKPLG-DDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLC 790
ITG++ + + L+ WV+GL++ K +D ++ ++++E+ +++ LC
Sbjct: 229 ITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLC 288
Query: 791 TADLPLKRPSMQQIVGLLK 809
T P++RP M ++V +L+
Sbjct: 289 TQSSPMERPKMSEVVRMLE 307
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 169 bits (429), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 106/322 (32%), Positives = 167/322 (51%), Gaps = 38/322 (11%)
Query: 495 LLNITFADLLSATSNFDRGTLLAEGKFGPVYRGFLPGGIHVAVKVL----VHGSTLTDQE 550
L + +L A+ NF +L G FG VY+G L G VAVK L G L Q
Sbjct: 25 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQT 84
Query: 551 AARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXX 610
E+E + H NL+ L G+C+ +R+ +Y YM NG++ + L + P
Sbjct: 85 ---EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERP----------- 130
Query: 611 XXXXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYL 670
S+ L W R +IALG+AR LA+LH C P IIHRD+KA+++ L
Sbjct: 131 --------------ESQPPLD-WPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILL 175
Query: 671 DMNLEPRLSDFGLAKI--FGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVL 728
D E + DFGLAK+ + + RG+ G+I PE+ + K+DV+ YGV+L
Sbjct: 176 DEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGK--SSEKTDVFGYGVML 233
Query: 729 LELITGKKPLG-DDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIG 787
LELITG++ + + L+ WV+GL++ K +D ++ ++++E+ +++
Sbjct: 234 LELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVA 293
Query: 788 YLCTADLPLKRPSMQQIVGLLK 809
LCT P++RP M ++V +L+
Sbjct: 294 LLCTQSSPMERPKMSEVVRMLE 315
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 109/322 (33%), Positives = 158/322 (49%), Gaps = 49/322 (15%)
Query: 498 ITFADLLSATSNFDRGTLLAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEY 557
+ DL AT+NFD L+ G FG VY+G L G VA+K S+ +E E+E
Sbjct: 29 VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIET 88
Query: 558 LGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLH--DLPLGVQXXXXXXXXXXXX 615
L +HP+LV L G+C ++ I IY YMENGNL+ L+ DLP
Sbjct: 89 LSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPT--------------- 133
Query: 616 XXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLE 675
+ +W R +I +G AR L +LH + IIHRD+K+ ++ LD N
Sbjct: 134 -------------MSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFV 177
Query: 676 PRLSDFGLAKIFGNGLDE----EIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLEL 731
P+++DFG++K G LD+ + +G+ GYI PE+ T KSDVY +GVVL E+
Sbjct: 178 PKITDFGISKK-GTELDQTHLXXVVKGTLGYIDPEYFIKGR--LTEKSDVYSFGVVLFEV 234
Query: 732 ITGKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDP----KIRDTGPEKQMEEALKIG 787
+ + + P E NL W N + + +DP KIR K + A+K
Sbjct: 235 LCARSAIVQSLPREMV-NLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCL 293
Query: 788 YLCTADLPLKRPSMQQIVGLLK 809
L + D RPSM ++ L+
Sbjct: 294 ALSSED----RPSMGDVLWKLE 311
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/321 (33%), Positives = 155/321 (48%), Gaps = 47/321 (14%)
Query: 498 ITFADLLSATSNFDRGTLLAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEY 557
+ DL AT+NFD L+ G FG VY+G L G VA+K S+ +E E+E
Sbjct: 29 VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIET 88
Query: 558 LGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLH--DLPLGVQXXXXXXXXXXXX 615
L +HP+LV L G+C ++ I IY YMENGNL+ L+ DLP
Sbjct: 89 LSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPT--------------- 133
Query: 616 XXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLE 675
+ +W R +I +G AR L +LH + IIHRD+K+ ++ LD N
Sbjct: 134 -------------MSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFV 177
Query: 676 PRLSDFGLAKI---FGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELI 732
P+++DFG++K G + +G+ GYI PE+ T KSDVY +GVVL E++
Sbjct: 178 PKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGR--LTEKSDVYSFGVVLFEVL 235
Query: 733 TGKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDP----KIRDTGPEKQMEEALKIGY 788
+ + P E NL W N + + +DP KIR K + A+K
Sbjct: 236 CARSAIVQSLPREMV-NLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLA 294
Query: 789 LCTADLPLKRPSMQQIVGLLK 809
L + D RPSM ++ L+
Sbjct: 295 LSSED----RPSMGDVLWKLE 311
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 120/359 (33%), Positives = 179/359 (49%), Gaps = 57/359 (15%)
Query: 40 LSGSVPDTTIGKLSKLQSLDLSENNITA-LPSDLWSLGSLKSLNLSYNRISGSLPSNIGN 98
LSG++P +++G LSKL+ L L N + +P +L + +L++L L +N ++G +PS + N
Sbjct: 427 LSGTIP-SSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSN 485
Query: 99 FGLLEVFDLSNNNFSGEIPAAISSLVSLRVLKLDGNMFQWSIPPGLLNCQSLVTVDLSMN 158
L LSNN +GEIP I L +L +LKL N F +IP L +C+SL+ +DL+ N
Sbjct: 486 CTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTN 545
Query: 159 QLNGSLPDGFGAAFPKLKSLNLAGNEIKGRDTHFA---GLKSITNLNISGNLFQGSVMGV 215
NG++P AA K +S +A N I G+ + G+K + +GNL + G+
Sbjct: 546 LFNGTIP----AAMFK-QSGKIAANFIAGKRYVYIKNDGMKK--ECHGAGNLLE--FQGI 596
Query: 216 FLESLEVIDLR------SNQFQGHISQVQFNSSYNWSRLVYVDLSENQLSGEIFHNFSQA 269
E L + R S + GH S N+ ++++D+S N LSG I
Sbjct: 597 RSEQLNRLSTRNPCNITSRVYGGHTSPTFDNN----GSMMFLDMSYNMLSGYIPK----- 647
Query: 270 QNLKHLSLAYNRFTRQEFPQIGTLLGLEHLNLSRTSLIGDIPSEILQLSSLHTLDLSMNH 329
+IG++ L LNL + G IP E+ L L+ LDLS N
Sbjct: 648 -------------------EIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNK 688
Query: 330 LTGQIPTV--SAKNLGIIDMSHNNLSGEIPASLLEKLPQMERFNFS--YNNLTLCASEL 384
L G+IP + L ID+S+NNLSG IP ++ Q E F + NN LC L
Sbjct: 689 LDGRIPQAMSALTMLTEIDLSNNNLSGPIP-----EMGQFETFPPAKFLNNPGLCGYPL 742
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 110/340 (32%), Positives = 167/340 (49%), Gaps = 17/340 (5%)
Query: 46 DTTIGKLSKLQSLDLSENNITALPSDLWSLGSLKSLNLSYNRISGSLPSNIGNFGLLEVF 105
D + + L+ LD+S NN + L +L+ L++S N++SG I L++
Sbjct: 190 DVDVSRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLL 249
Query: 106 DLSNNNFSGEIPAAISSLVSLRVLKLDGNMFQWSIPPGLLN-CQSLVTVDLSMNQLNGSL 164
++S+N F G IP L SL+ L L N F IP L C +L +DLS N G++
Sbjct: 250 NISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAV 307
Query: 165 PDGFGAAFPKLKSLNLAGNEIKGR---DTHFAGLKSITNLNISGNLFQGSV---MGVFLE 218
P FG+ L+SL L+ N G DT ++ + L++S N F G + +
Sbjct: 308 PPFFGSCS-LLESLALSSNNFSGELPMDTLLK-MRGLKVLDLSFNEFSGELPESLTNLSA 365
Query: 219 SLEVIDLRSNQFQGHISQVQFNSSYNWSRLVYVDLSENQLSGEIFHNFSQAQNLKHLSLA 278
SL +DL SN F G I + N + +Y L N +G+I S L L L+
Sbjct: 366 SLLTLDLSSNNFSGPILPNLCQNPKNTLQELY--LQNNGFTGKIPPTLSNCSELVSLHLS 423
Query: 279 YNRFTRQEFPQIGTLLGLEHLNLSRTSLIGDIPSEILQLSSLHTLDLSMNHLTGQIPT-- 336
+N + +G+L L L L L G+IP E++ + +L TL L N LTG+IP+
Sbjct: 424 FNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGL 483
Query: 337 VSAKNLGIIDMSHNNLSGEIPASL--LEKLPQMERFNFSY 374
+ NL I +S+N L+GEIP + LE L ++ N S+
Sbjct: 484 SNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSF 523
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 129/470 (27%), Positives = 190/470 (40%), Gaps = 113/470 (24%)
Query: 16 CSWRGVVCDSNKQHVTDFLASNSGLSGSVPDTTIGKLSKLQSLDLSENNITALPSDLWSL 75
C++ GV C +K D + + S +++ L+ L+SL LS ++I S
Sbjct: 37 CTFDGVTCRDDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFLSNSHINGSVSGFKCS 96
Query: 76 GSLKSLNLSYNRISG-----------------SLPSNIGNF------GL----LEVFDLS 108
SL SL+LS N +SG ++ SN +F GL LEV DLS
Sbjct: 97 ASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLS 156
Query: 109 NNNFSGEIPAA-------------------------ISSLVSLRVLKLDGNMFQWSIPPG 143
N+ SG +S V+L L + N F I P
Sbjct: 157 ANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGI-PF 215
Query: 144 LLNCQSLVTVDLSMNQLNGSLPDGFGAAFPKLKSLNLAGNEIKG---------------R 188
L +C +L +D+S N+L+G +LK LN++ N+ G
Sbjct: 216 LGDCSALQHLDISGNKLSGDFSRAISTC-TELKLLNISSNQFVGPIPPLPLKSLQYLSLA 274
Query: 189 DTHFAG---------LKSITNLNISGNLFQGSVMGVF----------------------- 216
+ F G ++T L++SGN F G+V F
Sbjct: 275 ENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMD 334
Query: 217 ----LESLEVIDLRSNQFQGHISQVQFNSSYNWSRLVYVDLSENQLSGEIFHNFSQ--AQ 270
+ L+V+DL N+F G + + N S + L+ +DLS N SG I N Q
Sbjct: 335 TLLKMRGLKVLDLSFNEFSGELPESLTNLS---ASLLTLDLSSNNFSGPILPNLCQNPKN 391
Query: 271 NLKHLSLAYNRFTRQEFPQIGTLLGLEHLNLSRTSLIGDIPSEILQLSSLHTLDLSMNHL 330
L+ L L N FT + P + L L+LS L G IPS + LS L L L +N L
Sbjct: 392 TLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNML 451
Query: 331 TGQIPT--VSAKNLGIIDMSHNNLSGEIPASLLEKLPQMERFNFSYNNLT 378
G+IP + K L + + N+L+GEIP+ L + + S N LT
Sbjct: 452 EGEIPQELMYVKTLETLILDFNDLTGEIPSG-LSNCTNLNWISLSNNRLT 500
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 120/359 (33%), Positives = 179/359 (49%), Gaps = 57/359 (15%)
Query: 40 LSGSVPDTTIGKLSKLQSLDLSENNITA-LPSDLWSLGSLKSLNLSYNRISGSLPSNIGN 98
LSG++P +++G LSKL+ L L N + +P +L + +L++L L +N ++G +PS + N
Sbjct: 430 LSGTIP-SSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSN 488
Query: 99 FGLLEVFDLSNNNFSGEIPAAISSLVSLRVLKLDGNMFQWSIPPGLLNCQSLVTVDLSMN 158
L LSNN +GEIP I L +L +LKL N F +IP L +C+SL+ +DL+ N
Sbjct: 489 CTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTN 548
Query: 159 QLNGSLPDGFGAAFPKLKSLNLAGNEIKGRDTHFA---GLKSITNLNISGNLFQGSVMGV 215
NG++P AA K +S +A N I G+ + G+K + +GNL + G+
Sbjct: 549 LFNGTIP----AAMFK-QSGKIAANFIAGKRYVYIKNDGMKK--ECHGAGNLLE--FQGI 599
Query: 216 FLESLEVIDLR------SNQFQGHISQVQFNSSYNWSRLVYVDLSENQLSGEIFHNFSQA 269
E L + R S + GH S N+ ++++D+S N LSG I
Sbjct: 600 RSEQLNRLSTRNPCNITSRVYGGHTSPTFDNN----GSMMFLDMSYNMLSGYIPK----- 650
Query: 270 QNLKHLSLAYNRFTRQEFPQIGTLLGLEHLNLSRTSLIGDIPSEILQLSSLHTLDLSMNH 329
+IG++ L LNL + G IP E+ L L+ LDLS N
Sbjct: 651 -------------------EIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNK 691
Query: 330 LTGQIPTV--SAKNLGIIDMSHNNLSGEIPASLLEKLPQMERFNFS--YNNLTLCASEL 384
L G+IP + L ID+S+NNLSG IP ++ Q E F + NN LC L
Sbjct: 692 LDGRIPQAMSALTMLTEIDLSNNNLSGPIP-----EMGQFETFPPAKFLNNPGLCGYPL 745
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 110/340 (32%), Positives = 167/340 (49%), Gaps = 17/340 (5%)
Query: 46 DTTIGKLSKLQSLDLSENNITALPSDLWSLGSLKSLNLSYNRISGSLPSNIGNFGLLEVF 105
D + + L+ LD+S NN + L +L+ L++S N++SG I L++
Sbjct: 193 DVDVSRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLL 252
Query: 106 DLSNNNFSGEIPAAISSLVSLRVLKLDGNMFQWSIPPGLLN-CQSLVTVDLSMNQLNGSL 164
++S+N F G IP L SL+ L L N F IP L C +L +DLS N G++
Sbjct: 253 NISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAV 310
Query: 165 PDGFGAAFPKLKSLNLAGNEIKGR---DTHFAGLKSITNLNISGNLFQGSV---MGVFLE 218
P FG+ L+SL L+ N G DT ++ + L++S N F G + +
Sbjct: 311 PPFFGSCS-LLESLALSSNNFSGELPMDTLLK-MRGLKVLDLSFNEFSGELPESLTNLSA 368
Query: 219 SLEVIDLRSNQFQGHISQVQFNSSYNWSRLVYVDLSENQLSGEIFHNFSQAQNLKHLSLA 278
SL +DL SN F G I + N + +Y L N +G+I S L L L+
Sbjct: 369 SLLTLDLSSNNFSGPILPNLCQNPKNTLQELY--LQNNGFTGKIPPTLSNCSELVSLHLS 426
Query: 279 YNRFTRQEFPQIGTLLGLEHLNLSRTSLIGDIPSEILQLSSLHTLDLSMNHLTGQIPT-- 336
+N + +G+L L L L L G+IP E++ + +L TL L N LTG+IP+
Sbjct: 427 FNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGL 486
Query: 337 VSAKNLGIIDMSHNNLSGEIPASL--LEKLPQMERFNFSY 374
+ NL I +S+N L+GEIP + LE L ++ N S+
Sbjct: 487 SNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSF 526
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 129/470 (27%), Positives = 190/470 (40%), Gaps = 113/470 (24%)
Query: 16 CSWRGVVCDSNKQHVTDFLASNSGLSGSVPDTTIGKLSKLQSLDLSENNITALPSDLWSL 75
C++ GV C +K D + + S +++ L+ L+SL LS ++I S
Sbjct: 40 CTFDGVTCRDDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFLSNSHINGSVSGFKCS 99
Query: 76 GSLKSLNLSYNRISG-----------------SLPSNIGNF------GL----LEVFDLS 108
SL SL+LS N +SG ++ SN +F GL LEV DLS
Sbjct: 100 ASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLS 159
Query: 109 NNNFSGEIPAA-------------------------ISSLVSLRVLKLDGNMFQWSIPPG 143
N+ SG +S V+L L + N F I P
Sbjct: 160 ANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGI-PF 218
Query: 144 LLNCQSLVTVDLSMNQLNGSLPDGFGAAFPKLKSLNLAGNEIKG---------------R 188
L +C +L +D+S N+L+G +LK LN++ N+ G
Sbjct: 219 LGDCSALQHLDISGNKLSGDFSRAISTC-TELKLLNISSNQFVGPIPPLPLKSLQYLSLA 277
Query: 189 DTHFAG---------LKSITNLNISGNLFQGSVMGVF----------------------- 216
+ F G ++T L++SGN F G+V F
Sbjct: 278 ENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMD 337
Query: 217 ----LESLEVIDLRSNQFQGHISQVQFNSSYNWSRLVYVDLSENQLSGEIFHNFSQ--AQ 270
+ L+V+DL N+F G + + N S + L+ +DLS N SG I N Q
Sbjct: 338 TLLKMRGLKVLDLSFNEFSGELPESLTNLS---ASLLTLDLSSNNFSGPILPNLCQNPKN 394
Query: 271 NLKHLSLAYNRFTRQEFPQIGTLLGLEHLNLSRTSLIGDIPSEILQLSSLHTLDLSMNHL 330
L+ L L N FT + P + L L+LS L G IPS + LS L L L +N L
Sbjct: 395 TLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNML 454
Query: 331 TGQIPT--VSAKNLGIIDMSHNNLSGEIPASLLEKLPQMERFNFSYNNLT 378
G+IP + K L + + N+L+GEIP+ L + + S N LT
Sbjct: 455 EGEIPQELMYVKTLETLILDFNDLTGEIPSG-LSNCTNLNWISLSNNRLT 503
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/329 (30%), Positives = 153/329 (46%), Gaps = 50/329 (15%)
Query: 499 TFADLLSATSNFDR------GTLLAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAA 552
+F +L + T+NFD G + EG FG VY+G++ VAVK L +T +E
Sbjct: 16 SFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELK 74
Query: 553 R----ELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXX 608
+ E++ + + +H NLV L G+ GD +Y YM NG+L + L L
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD--------- 125
Query: 609 XXXXXXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSV 668
G+ L +W R KIA G A + FLH IHRDIK++++
Sbjct: 126 ----------------GTPPL--SWHMRCKIAQGAANGINFLHENHH---IHRDIKSANI 164
Query: 669 YLDMNLEPRLSDFGLAKI---FGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYG 725
LD ++SDFGLA+ F + G+ Y+ PE + + TPKSD+Y +G
Sbjct: 165 LLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALRGE---ITPKSDIYSFG 221
Query: 726 VVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALK 785
VVLLE+ITG P D++ E + L ID K+ D +E
Sbjct: 222 VVLLEIITG-LPAVDEH-REPQLLLDIKEEIEDEEKTIEDYIDKKMND-ADSTSVEAMYS 278
Query: 786 IGYLCTADLPLKRPSMQQIVGLLKDIEST 814
+ C + KRP ++++ LL+++ ++
Sbjct: 279 VASQCLHEKKNKRPDIKKVQQLLQEMTAS 307
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/329 (30%), Positives = 153/329 (46%), Gaps = 50/329 (15%)
Query: 499 TFADLLSATSNFDR------GTLLAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAA 552
+F +L + T+NFD G + EG FG VY+G++ VAVK L +T +E
Sbjct: 16 SFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELK 74
Query: 553 R----ELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXX 608
+ E++ + + +H NLV L G+ GD +Y YM NG+L + L L
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD--------- 125
Query: 609 XXXXXXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSV 668
G+ L +W R KIA G A + FLH IHRDIK++++
Sbjct: 126 ----------------GTPPL--SWHMRCKIAQGAANGINFLHENHH---IHRDIKSANI 164
Query: 669 YLDMNLEPRLSDFGLAKI---FGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYG 725
LD ++SDFGLA+ F + G+ Y+ PE + + TPKSD+Y +G
Sbjct: 165 LLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALRGE---ITPKSDIYSFG 221
Query: 726 VVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALK 785
VVLLE+ITG P D++ E + L ID K+ D +E
Sbjct: 222 VVLLEIITG-LPAVDEH-REPQLLLDIKEEIEDEEKTIEDYIDKKMND-ADSTSVEAMYS 278
Query: 786 IGYLCTADLPLKRPSMQQIVGLLKDIEST 814
+ C + KRP ++++ LL+++ ++
Sbjct: 279 VASQCLHEKKNKRPDIKKVQQLLQEMTAS 307
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 154/331 (46%), Gaps = 50/331 (15%)
Query: 497 NITFADLLSATSNFDR------GTLLAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQE 550
+ +F +L + T+NFD G + EG FG VY+G++ VAVK L +T +E
Sbjct: 8 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEE 66
Query: 551 AAR----ELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXX 606
+ E++ + + +H NLV L G+ GD +Y YM NG+L + L L
Sbjct: 67 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD------- 119
Query: 607 XXXXXXXXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKAS 666
G+ L +W R KIA G A + FLH IHRDIK++
Sbjct: 120 ------------------GTPPL--SWHMRCKIAQGAANGINFLHENHH---IHRDIKSA 156
Query: 667 SVYLDMNLEPRLSDFGLAKI---FGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYC 723
++ LD ++SDFGLA+ F + G+ Y+ PE + + TPKSD+Y
Sbjct: 157 NILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALRGE---ITPKSDIYS 213
Query: 724 YGVVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEA 783
+GVVLLE+ITG P D++ E + L ID K+ D +E
Sbjct: 214 FGVVLLEIITG-LPAVDEH-REPQLLLDIKEEIEDEEKTIEDYIDKKMND-ADSTSVEAM 270
Query: 784 LKIGYLCTADLPLKRPSMQQIVGLLKDIEST 814
+ C + KRP ++++ LL+++ ++
Sbjct: 271 YSVASQCLHEKKNKRPDIKKVQQLLQEMTAS 301
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 146/327 (44%), Gaps = 50/327 (15%)
Query: 497 NITFADLLSATSNFDR------GTLLAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQE 550
+ +F +L + T+NFD G EG FG VY+G++ VAVK L +T +E
Sbjct: 5 SFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEE 63
Query: 551 AAR----ELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXX 606
+ E++ + +H NLV L G+ GD +Y Y NG+L + L L
Sbjct: 64 LKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLD------- 116
Query: 607 XXXXXXXXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKAS 666
G+ L +W R KIA G A + FLH IHRDIK++
Sbjct: 117 ------------------GTPPL--SWHXRCKIAQGAANGINFLHENHH---IHRDIKSA 153
Query: 667 SVYLDMNLEPRLSDFGLAKI---FGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYC 723
++ LD ++SDFGLA+ F + G+ Y PE + + TPKSD+Y
Sbjct: 154 NILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALRGE---ITPKSDIYS 210
Query: 724 YGVVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEA 783
+GVVLLE+ITG P D++ E + L ID K D +E
Sbjct: 211 FGVVLLEIITG-LPAVDEH-REPQLLLDIKEEIEDEEKTIEDYIDKKXND-ADSTSVEAX 267
Query: 784 LKIGYLCTADLPLKRPSMQQIVGLLKD 810
+ C + KRP ++++ LL++
Sbjct: 268 YSVASQCLHEKKNKRPDIKKVQQLLQE 294
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 143/304 (47%), Gaps = 52/304 (17%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQ--EAARELEYLGRIKHPNLVPLTGYC 573
+ G FG V+R G VAVK+L+ ++ E RE+ + R++HPN+V G
Sbjct: 45 IGAGSFGTVHRAEWHGS-DVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 574 IAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTW 633
+ +Y+ G+L LLH G+ L
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLH--------------------------KSGAREQLDE- 136
Query: 634 RFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNG-LD 692
R R +A A+ + +LH+ +PPI+HRD+K+ ++ +D ++ DFGL+++ + L
Sbjct: 137 RRRLSMAYDVAKGMNYLHNR-NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLX 195
Query: 693 EEIARGSPGYIPPEFAQPDSDFPT-PKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLV 751
+ A G+P ++ PE + D P+ KSDVY +GV+L EL T ++P G+ P +V
Sbjct: 196 SKXAAGTPEWMAPEVLR---DEPSNEKSDVYSFGVILWELATLQQPWGNLNP----AQVV 248
Query: 752 SWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDI 811
+ V + + R ++P++ A+ G C + P KRPS I+ LL+ +
Sbjct: 249 AAVGFKCKRLEIPRNLNPQV----------AAIIEG--CWTNEPWKRPSFATIMDLLRPL 296
Query: 812 ESTA 815
+A
Sbjct: 297 IKSA 300
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 144/304 (47%), Gaps = 52/304 (17%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQ--EAARELEYLGRIKHPNLVPLTGYC 573
+ G FG V+R G VAVK+L+ ++ E RE+ + R++HPN+V G
Sbjct: 45 IGAGSFGTVHRAEWHGS-DVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 574 IAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTW 633
+ +Y+ G+L LLH G+ L
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLH--------------------------KSGAREQLDE- 136
Query: 634 RFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNG-LD 692
R R +A A+ + +LH+ +PPI+HR++K+ ++ +D ++ DFGL+++ + L
Sbjct: 137 RRRLSMAYDVAKGMNYLHNR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLS 195
Query: 693 EEIARGSPGYIPPEFAQPDSDFPT-PKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLV 751
+ A G+P ++ PE + D P+ KSDVY +GV+L EL T ++P G+ P + +V
Sbjct: 196 SKSAAGTPEWMAPEVLR---DEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQ----VV 248
Query: 752 SWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDI 811
+ V + + R ++P++ A+ G C + P KRPS I+ LL+ +
Sbjct: 249 AAVGFKCKRLEIPRNLNPQV----------AAIIEG--CWTNEPWKRPSFATIMDLLRPL 296
Query: 812 ESTA 815
+A
Sbjct: 297 IKSA 300
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 142/349 (40%), Gaps = 85/349 (24%)
Query: 8 ASYFSASFC---SWRGVVCDSNKQHVTDFLASNSGLSGSVPDTTIGKLSKLQSLDLSENN 64
+S+ + C +W GV+CD++ Q ++ +LDLS N
Sbjct: 25 SSWLPTTDCCNRTWLGVLCDTDTQTY-----------------------RVNNLDLSGLN 61
Query: 65 IT---ALPSDLWSLGSLKSLNLSYNRISGSLPSNIGNFGLLEVFDLSNNNFSGEIPAAIS 121
+ +PS SL +L LN Y IG NN G IP AI+
Sbjct: 62 LPKPYPIPS---SLANLPYLNFLY----------IGGI----------NNLVGPIPPAIA 98
Query: 122 SLVSLRVLKLDGNMFQWSIPPGLLNCQSLVTVDLSMNQLNGSLPDGFGAAFPKLKSLNLA 181
L L L + +IP L ++LVT+D S N L+G+LP ++ P L +
Sbjct: 99 KLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSI-SSLPNLVGITFD 157
Query: 182 GNEIKGR--DTHFAGLKSITNLNISGNLFQGSVMGVFLESLEVIDLRSNQFQGHISQVQF 239
GN I G D++ + K T++ IS N G + F
Sbjct: 158 GNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL-------------------- 197
Query: 240 NSSYNWSRLVYVDLSENQLSGEIFHNFSQAQNLKHLSLAYNRFTRQEFPQIGTLLGLEHL 299
L +VDLS N L G+ F +N + + LA N + ++G L L
Sbjct: 198 -------NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAF-DLGKVGLSKNLNGL 249
Query: 300 NLSRTSLIGDIPSEILQLSSLHTLDLSMNHLTGQIPTVSAKNLGIIDMS 348
+L + G +P + QL LH+L++S N+L G+IP NL D+S
Sbjct: 250 DLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP--QGGNLQRFDVS 296
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 55/112 (49%), Gaps = 2/112 (1%)
Query: 246 SRLVYVDLSENQLSGEIFHNFSQAQNLKHLSLAYNRFTRQEFPQIGTLLGLEHLNLSRTS 305
++L Y+ ++ +SG I SQ + L L +YN + P I +L L +
Sbjct: 101 TQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNR 160
Query: 306 LIGDIPSEILQLSSLHT-LDLSMNHLTGQIP-TVSAKNLGIIDMSHNNLSGE 355
+ G IP S L T + +S N LTG+IP T + NL +D+S N L G+
Sbjct: 161 ISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGD 212
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 6/99 (6%)
Query: 267 SQAQNLKHLSLAY----NRFTRQEFPQIGTLLGLEHLNLSRTSLIGDIPSEILQLSSLHT 322
S NL +L+ Y N P I L L +L ++ T++ G IP + Q+ +L T
Sbjct: 70 SSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129
Query: 323 LDLSMNHLTGQIP--TVSAKNLGIIDMSHNNLSGEIPAS 359
LD S N L+G +P S NL I N +SG IP S
Sbjct: 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDS 168
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 129/311 (41%), Gaps = 49/311 (15%)
Query: 513 GTLLAEGKFGPVYRGFLPGGIH------VAVKVLVHGSTLTDQEAA----RELEYLGRIK 562
G L G FG V G I VAVK+L + LT++EA + L YLG
Sbjct: 44 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG--N 101
Query: 563 HPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQ 622
H N+V L G C G + I +Y G+L N L ++
Sbjct: 102 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 161
Query: 623 NVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFG 682
++ S F +++A G +AFL S IHRD+ A ++ L ++ DFG
Sbjct: 162 DLLS--------FSYQVAKG----MAFL---ASKNCIHRDLAARNILLTHGRITKICDFG 206
Query: 683 LAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT-GKKPL 738
LA+ N D +P ++ P+S F T +SDV+ YG+ L EL + G P
Sbjct: 207 LARDIKN--DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP- 263
Query: 739 GDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKR 798
YP G+ ++K + I R PE E I C PLKR
Sbjct: 264 ---YP------------GMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKR 308
Query: 799 PSMQQIVGLLK 809
P+ +QIV L++
Sbjct: 309 PTFKQIVQLIE 319
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 129/311 (41%), Gaps = 49/311 (15%)
Query: 513 GTLLAEGKFGPVYRGFLPGGIH------VAVKVLVHGSTLTDQEAA----RELEYLGRIK 562
G L G FG V G I VAVK+L + LT++EA + L YLG
Sbjct: 28 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG--N 85
Query: 563 HPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQ 622
H N+V L G C G + I +Y G+L N L ++
Sbjct: 86 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 145
Query: 623 NVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFG 682
++ S F +++A G +AFL S IHRD+ A ++ L ++ DFG
Sbjct: 146 DLLS--------FSYQVAKG----MAFL---ASKNCIHRDLAARNILLTHGRITKICDFG 190
Query: 683 LAKIFGNGLDEEIARGSPGYIPPEFAQPDSDF---PTPKSDVYCYGVVLLELIT-GKKPL 738
LA+ N D +P ++ P+S F T +SDV+ YG+ L EL + G P
Sbjct: 191 LARDIKN--DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP- 247
Query: 739 GDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKR 798
YP G+ ++K + I R PE E I C PLKR
Sbjct: 248 ---YP------------GMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKR 292
Query: 799 PSMQQIVGLLK 809
P+ +QIV L++
Sbjct: 293 PTFKQIVQLIE 303
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 129/311 (41%), Gaps = 49/311 (15%)
Query: 513 GTLLAEGKFGPVYRGFLPGGIH------VAVKVLVHGSTLTDQEAA----RELEYLGRIK 562
G L G FG V G I VAVK+L + LT++EA + L YLG
Sbjct: 46 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG--N 103
Query: 563 HPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQ 622
H N+V L G C G + I +Y G+L N L ++
Sbjct: 104 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 163
Query: 623 NVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFG 682
++ S F +++A G +AFL S IHRD+ A ++ L ++ DFG
Sbjct: 164 DLLS--------FSYQVAKG----MAFL---ASKNCIHRDLAARNILLTHGRITKICDFG 208
Query: 683 LAKIFGNGLDEEIARGSPGYIPPEFAQPDSDF---PTPKSDVYCYGVVLLELIT-GKKPL 738
LA+ N D +P ++ P+S F T +SDV+ YG+ L EL + G P
Sbjct: 209 LARDIKN--DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP- 265
Query: 739 GDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKR 798
YP G+ ++K + I R PE E I C PLKR
Sbjct: 266 ---YP------------GMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKR 310
Query: 799 PSMQQIVGLLK 809
P+ +QIV L++
Sbjct: 311 PTFKQIVQLIE 321
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 129/311 (41%), Gaps = 49/311 (15%)
Query: 513 GTLLAEGKFGPVYRGFLPGGIH------VAVKVLVHGSTLTDQEAA----RELEYLGRIK 562
G L G FG V G I VAVK+L + LT++EA + L YLG
Sbjct: 51 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN-- 108
Query: 563 HPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQ 622
H N+V L G C G + I +Y G+L N L ++
Sbjct: 109 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 168
Query: 623 NVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFG 682
++ S F +++A G +AFL S IHRD+ A ++ L ++ DFG
Sbjct: 169 DLLS--------FSYQVAKG----MAFL---ASKNCIHRDLAARNILLTHGRITKICDFG 213
Query: 683 LAKIFGNGLDEEIARGSPGYIPPEFAQPDSDF---PTPKSDVYCYGVVLLELIT-GKKPL 738
LA+ N D +P ++ P+S F T +SDV+ YG+ L EL + G P
Sbjct: 214 LARDIKN--DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP- 270
Query: 739 GDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKR 798
YP G+ ++K + I R PE E I C PLKR
Sbjct: 271 ---YP------------GMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKR 315
Query: 799 PSMQQIVGLLK 809
P+ +QIV L++
Sbjct: 316 PTFKQIVQLIE 326
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 129/311 (41%), Gaps = 49/311 (15%)
Query: 513 GTLLAEGKFGPVYRGFLPGGIH------VAVKVLVHGSTLTDQEAA----RELEYLGRIK 562
G L G FG V G I VAVK+L + LT++EA + L YLG
Sbjct: 51 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN-- 108
Query: 563 HPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQ 622
H N+V L G C G + I +Y G+L N L ++
Sbjct: 109 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 168
Query: 623 NVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFG 682
++ S F +++A G +AFL S IHRD+ A ++ L ++ DFG
Sbjct: 169 DLLS--------FSYQVAKG----MAFL---ASKNCIHRDLAARNILLTHGRITKICDFG 213
Query: 683 LAKIFGNGLDEEIARGSPGYIPPEFAQPDSDF---PTPKSDVYCYGVVLLELIT-GKKPL 738
LA+ N D +P ++ P+S F T +SDV+ YG+ L EL + G P
Sbjct: 214 LARHIKN--DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP- 270
Query: 739 GDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKR 798
YP G+ ++K + I R PE E I C PLKR
Sbjct: 271 ---YP------------GMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKR 315
Query: 799 PSMQQIVGLLK 809
P+ +QIV L++
Sbjct: 316 PTFKQIVQLIE 326
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 141/303 (46%), Gaps = 65/303 (21%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIA 575
L G+FG V+ G+ G VAVK L GS D A E + +++H LV L Y +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLA-EANLMKQLQHQRLVRL--YAVV 77
Query: 576 GDQRIAIY-DYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWR 634
+ I I +YMENG+L + L P G++ N + ++ ++
Sbjct: 78 TQEPIYIITEYMENGSLVDFLKT-PSGIKLTI------------NKLLDMAAQ------- 117
Query: 635 FRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEE 694
A +AF+ IHRD++A+++ + L +++DFGLA++ + +E
Sbjct: 118 --------IAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIED--NEX 164
Query: 695 IARGSPGYIPPEFAQPDS----DFPTPKSDVYCYGVVLLELIT-GKKPL-GDDYPEEKEG 748
AR + P ++ P++ F T KSDV+ +G++L E++T G+ P G PE
Sbjct: 165 TAREGAKF-PIKWTAPEAINYGTF-TIKSDVWSFGILLTEIVTHGRIPYPGMTNPE---- 218
Query: 749 NLVSWVRGLVRN-NKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGL 807
+++N +G R + P D P EE ++ LC + P RP+ + +
Sbjct: 219 --------VIQNLERGYRMVRP---DNCP----EELYQLMRLCWKERPEDRPTFDYLRSV 263
Query: 808 LKD 810
L+D
Sbjct: 264 LED 266
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 141/303 (46%), Gaps = 65/303 (21%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIA 575
L G+FG V+ G+ G VAVK L GS D A E + +++H LV L Y +
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLA-EANLMKQLQHQRLVRL--YAVV 78
Query: 576 GDQRIAIY-DYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWR 634
+ I I +YMENG+L + L P G++ N + ++ ++
Sbjct: 79 TQEPIYIITEYMENGSLVDFLKT-PSGIKLTI------------NKLLDMAAQ------- 118
Query: 635 FRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEE 694
A +AF+ IHRD++A+++ + L +++DFGLA++ + +E
Sbjct: 119 --------IAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIED--NEX 165
Query: 695 IARGSPGYIPPEFAQPDS----DFPTPKSDVYCYGVVLLELIT-GKKPL-GDDYPEEKEG 748
AR + P ++ P++ F T KSDV+ +G++L E++T G+ P G PE
Sbjct: 166 TAREGAKF-PIKWTAPEAINYGTF-TIKSDVWSFGILLTEIVTHGRIPYPGMTNPE---- 219
Query: 749 NLVSWVRGLVRN-NKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGL 807
+++N +G R + P D P EE ++ LC + P RP+ + +
Sbjct: 220 --------VIQNLERGYRMVRP---DNCP----EELYQLMRLCWKERPEDRPTFDYLRSV 264
Query: 808 LKD 810
L+D
Sbjct: 265 LED 267
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 141/303 (46%), Gaps = 65/303 (21%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIA 575
L G+FG V+ G+ G VAVK L GS D A E + +++H LV L Y +
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLA-EANLMKQLQHQRLVRL--YAVV 79
Query: 576 GDQRIAIY-DYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWR 634
+ I I +YMENG+L + L P G++ N + ++ ++
Sbjct: 80 TQEPIYIITEYMENGSLVDFLKT-PSGIKLTI------------NKLLDMAAQ------- 119
Query: 635 FRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEE 694
A +AF+ IHRD++A+++ + L +++DFGLA++ + +E
Sbjct: 120 --------IAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIED--NEX 166
Query: 695 IARGSPGYIPPEFAQPDS----DFPTPKSDVYCYGVVLLELIT-GKKPL-GDDYPEEKEG 748
AR + P ++ P++ F T KSDV+ +G++L E++T G+ P G PE
Sbjct: 167 TAREGAKF-PIKWTAPEAINYGTF-TIKSDVWSFGILLTEIVTHGRIPYPGMTNPE---- 220
Query: 749 NLVSWVRGLVRN-NKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGL 807
+++N +G R + P D P EE ++ LC + P RP+ + +
Sbjct: 221 --------VIQNLERGYRMVRP---DNCP----EELYQLMRLCWKERPEDRPTFDYLRSV 265
Query: 808 LKD 810
L+D
Sbjct: 266 LED 268
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 141/303 (46%), Gaps = 65/303 (21%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIA 575
L G+FG V+ G+ G VAVK L GS D A E + +++H LV L Y +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLA-EANLMKQLQHQRLVRL--YAVV 83
Query: 576 GDQRIAIY-DYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWR 634
+ I I +YMENG+L + L P G++ N + ++ ++
Sbjct: 84 TQEPIYIITEYMENGSLVDFLKT-PSGIKLTI------------NKLLDMAAQ------- 123
Query: 635 FRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEE 694
A +AF+ IHRD++A+++ + L +++DFGLA++ + +E
Sbjct: 124 --------IAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIED--NEY 170
Query: 695 IARGSPGYIPPEFAQPDS----DFPTPKSDVYCYGVVLLELIT-GKKPL-GDDYPEEKEG 748
AR + P ++ P++ F T KSDV+ +G++L E++T G+ P G PE
Sbjct: 171 TAREGAKF-PIKWTAPEAINYGTF-TIKSDVWSFGILLTEIVTHGRIPYPGMTNPE---- 224
Query: 749 NLVSWVRGLVRN-NKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGL 807
+++N +G R + P D P EE ++ LC + P RP+ + +
Sbjct: 225 --------VIQNLERGYRMVRP---DNCP----EELYQLMRLCWKERPEDRPTFDYLRSV 269
Query: 808 LKD 810
L+D
Sbjct: 270 LED 272
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 141/303 (46%), Gaps = 65/303 (21%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIA 575
L G+FG V+ G+ G VAVK L GS D A E + +++H LV L Y +
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLA-EANLMKQLQHQRLVRL--YAVV 82
Query: 576 GDQRIAIY-DYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWR 634
+ I I +YMENG+L + L P G++ N + ++ ++
Sbjct: 83 TQEPIYIITEYMENGSLVDFLKT-PSGIKLTI------------NKLLDMAAQ------- 122
Query: 635 FRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEE 694
A +AF+ IHRD++A+++ + L +++DFGLA++ + +E
Sbjct: 123 --------IAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIED--NEY 169
Query: 695 IARGSPGYIPPEFAQPDS----DFPTPKSDVYCYGVVLLELIT-GKKPL-GDDYPEEKEG 748
AR + P ++ P++ F T KSDV+ +G++L E++T G+ P G PE
Sbjct: 170 TAREGAKF-PIKWTAPEAINYGTF-TIKSDVWSFGILLTEIVTHGRIPYPGMTNPE---- 223
Query: 749 NLVSWVRGLVRN-NKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGL 807
+++N +G R + P D P EE ++ LC + P RP+ + +
Sbjct: 224 --------VIQNLERGYRMVRP---DNCP----EELYQLMRLCWKERPEDRPTFDYLRSV 268
Query: 808 LKD 810
L+D
Sbjct: 269 LED 271
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 141/303 (46%), Gaps = 65/303 (21%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIA 575
L G+FG V+ G+ G VAVK L GS D A E + +++H LV L Y +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLA-EANLMKQLQHQRLVRL--YAVV 77
Query: 576 GDQRIAIY-DYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWR 634
+ I I +YMENG+L + L P G++ N + ++ ++
Sbjct: 78 TQEPIYIITEYMENGSLVDFLKT-PSGIKLTI------------NKLLDMAAQ------- 117
Query: 635 FRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEE 694
A +AF+ IHRD++A+++ + L +++DFGLA++ + +E
Sbjct: 118 --------IAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIED--NEY 164
Query: 695 IARGSPGYIPPEFAQPDS----DFPTPKSDVYCYGVVLLELIT-GKKPL-GDDYPEEKEG 748
AR + P ++ P++ F T KSDV+ +G++L E++T G+ P G PE
Sbjct: 165 TAREGAKF-PIKWTAPEAINYGTF-TIKSDVWSFGILLTEIVTHGRIPYPGMTNPE---- 218
Query: 749 NLVSWVRGLVRN-NKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGL 807
+++N +G R + P D P EE ++ LC + P RP+ + +
Sbjct: 219 --------VIQNLERGYRMVRP---DNCP----EELYQLMRLCWKERPEDRPTFDYLRSV 263
Query: 808 LKD 810
L+D
Sbjct: 264 LED 266
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 141/303 (46%), Gaps = 65/303 (21%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIA 575
L G+FG V+ G+ G VAVK L GS D A E + +++H LV L Y +
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLA-EANLMKQLQHQRLVRL--YAVV 86
Query: 576 GDQRIAIY-DYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWR 634
+ I I +YMENG+L + L P G++ N + ++ ++
Sbjct: 87 TQEPIYIITEYMENGSLVDFLKT-PSGIKLTI------------NKLLDMAAQ------- 126
Query: 635 FRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEE 694
A +AF+ IHRD++A+++ + L +++DFGLA++ + +E
Sbjct: 127 --------IAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIED--NEX 173
Query: 695 IARGSPGYIPPEFAQPDS----DFPTPKSDVYCYGVVLLELIT-GKKPL-GDDYPEEKEG 748
AR + P ++ P++ F T KSDV+ +G++L E++T G+ P G PE
Sbjct: 174 TAREGAKF-PIKWTAPEAINYGTF-TIKSDVWSFGILLTEIVTHGRIPYPGMTNPE---- 227
Query: 749 NLVSWVRGLVRN-NKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGL 807
+++N +G R + P D P EE ++ LC + P RP+ + +
Sbjct: 228 --------VIQNLERGYRMVRP---DNCP----EELYQLMRLCWKERPEDRPTFDYLRSV 272
Query: 808 LKD 810
L+D
Sbjct: 273 LED 275
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 141/303 (46%), Gaps = 65/303 (21%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIA 575
L G+FG V+ G+ G VAVK L GS D A E + +++H LV L Y +
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLA-EANLMKQLQHQRLVRL--YAVV 85
Query: 576 GDQRIAIY-DYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWR 634
+ I I +YMENG+L + L P G++ N + ++ ++
Sbjct: 86 TQEPIYIITEYMENGSLVDFLKT-PSGIKLTI------------NKLLDMAAQ------- 125
Query: 635 FRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEE 694
A +AF+ IHRD++A+++ + L +++DFGLA++ + +E
Sbjct: 126 --------IAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIED--NEX 172
Query: 695 IARGSPGYIPPEFAQPDS----DFPTPKSDVYCYGVVLLELIT-GKKPL-GDDYPEEKEG 748
AR + P ++ P++ F T KSDV+ +G++L E++T G+ P G PE
Sbjct: 173 TAREGAKF-PIKWTAPEAINYGTF-TIKSDVWSFGILLTEIVTHGRIPYPGMTNPE---- 226
Query: 749 NLVSWVRGLVRN-NKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGL 807
+++N +G R + P D P EE ++ LC + P RP+ + +
Sbjct: 227 --------VIQNLERGYRMVRP---DNCP----EELYQLMRLCWKERPEDRPTFDYLRSV 271
Query: 808 LKD 810
L+D
Sbjct: 272 LED 274
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 141/303 (46%), Gaps = 65/303 (21%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIA 575
L G+FG V+ G+ G VAVK L GS D A E + +++H LV L Y +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLA-EANLMKQLQHQRLVRL--YAVV 77
Query: 576 GDQRIAIY-DYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWR 634
+ I I +YMENG+L + L P G++ N + ++ ++
Sbjct: 78 TQEPIYIITEYMENGSLVDFLKT-PSGIKLTI------------NKLLDMAAQ------- 117
Query: 635 FRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEE 694
A +AF+ IHRD++A+++ + L +++DFGLA++ + +E
Sbjct: 118 --------IAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIED--NEX 164
Query: 695 IARGSPGYIPPEFAQPDS----DFPTPKSDVYCYGVVLLELIT-GKKPL-GDDYPEEKEG 748
AR + P ++ P++ F T KSDV+ +G++L E++T G+ P G PE
Sbjct: 165 TAREGAKF-PIKWTAPEAINYGTF-TIKSDVWSFGILLTEIVTHGRIPYPGMTNPE---- 218
Query: 749 NLVSWVRGLVRN-NKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGL 807
+++N +G R + P D P EE ++ LC + P RP+ + +
Sbjct: 219 --------VIQNLERGYRMVRP---DNCP----EELYQLMRLCWKERPEDRPTFDYLRSV 263
Query: 808 LKD 810
L+D
Sbjct: 264 LED 266
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 141/303 (46%), Gaps = 65/303 (21%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIA 575
L G+FG V+ G+ G VAVK L GS D A E + +++H LV L Y +
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLA-EANLMKQLQHQRLVRL--YAVV 72
Query: 576 GDQRIAIY-DYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWR 634
+ I I +YMENG+L + L P G++ N + ++ ++
Sbjct: 73 TQEPIYIITEYMENGSLVDFLKT-PSGIKLTI------------NKLLDMAAQ------- 112
Query: 635 FRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEE 694
A +AF+ IHRD++A+++ + L +++DFGLA++ + +E
Sbjct: 113 --------IAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIED--NEY 159
Query: 695 IARGSPGYIPPEFAQPDS----DFPTPKSDVYCYGVVLLELIT-GKKPL-GDDYPEEKEG 748
AR + P ++ P++ F T KSDV+ +G++L E++T G+ P G PE
Sbjct: 160 TAREGAKF-PIKWTAPEAINYGTF-TIKSDVWSFGILLTEIVTHGRIPYPGMTNPE---- 213
Query: 749 NLVSWVRGLVRN-NKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGL 807
+++N +G R + P D P EE ++ LC + P RP+ + +
Sbjct: 214 --------VIQNLERGYRMVRP---DNCP----EELYQLMRLCWKERPEDRPTFDYLRSV 258
Query: 808 LKD 810
L+D
Sbjct: 259 LED 261
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 114/256 (44%), Gaps = 54/256 (21%)
Query: 495 LLNITFADLLSATSNFDRGTLLAEGKFGPVYRGFLPGGIHVAVKVLVHGS----TLTDQE 550
LL I FA+L ++ G FG VYR F G VAVK H + T +
Sbjct: 1 LLEIDFAELTLEE-------IIGIGGFGKVYRAFWIGD-EVAVKAARHDPDEDISQTIEN 52
Query: 551 AARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXX 610
+E + +KHPN++ L G C+ + ++ G L +L
Sbjct: 53 VRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVL--------------- 97
Query: 611 XXXXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYL 670
S + + + +L W A+ AR + +LH PIIHRD+K+S++ +
Sbjct: 98 ---------SGKRIPPD-ILVNW------AVQIARGMNYLHDEAIVPIIHRDLKSSNILI 141
Query: 671 DMNLEP--------RLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVY 722
+E +++DFGLA+ + + + A G+ ++ PE + + + SDV+
Sbjct: 142 LQKVENGDLSNKILKITDFGLAREW-HRTTKMSAAGAYAWMAPEVIR--ASMFSKGSDVW 198
Query: 723 CYGVVLLELITGKKPL 738
YGV+L EL+TG+ P
Sbjct: 199 SYGVLLWELLTGEVPF 214
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 141/303 (46%), Gaps = 65/303 (21%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIA 575
L G+FG V+ G+ G VAVK L GS D A E + +++H LV L Y +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLA-EANLMKQLQHQRLVRL--YAVV 83
Query: 576 GDQRIAIY-DYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWR 634
+ I I +YMENG+L + L P G++ N + ++ ++
Sbjct: 84 TQEPIYIITEYMENGSLVDFLKT-PSGIKLTI------------NKLLDMAAQ------- 123
Query: 635 FRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEE 694
A +AF+ IHRD++A+++ + L +++DFGLA++ + +E
Sbjct: 124 --------IAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIED--NEX 170
Query: 695 IARGSPGYIPPEFAQPDS----DFPTPKSDVYCYGVVLLELIT-GKKPL-GDDYPEEKEG 748
AR + P ++ P++ F T KSDV+ +G++L E++T G+ P G PE
Sbjct: 171 TAREGAKF-PIKWTAPEAINYGTF-TIKSDVWSFGILLTEIVTHGRIPYPGMTNPE---- 224
Query: 749 NLVSWVRGLVRN-NKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGL 807
+++N +G R + P D P EE ++ LC + P RP+ + +
Sbjct: 225 --------VIQNLERGYRMVRP---DNCP----EELYQLMRLCWKERPEDRPTFDYLRSV 269
Query: 808 LKD 810
L+D
Sbjct: 270 LED 272
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 141/304 (46%), Gaps = 65/304 (21%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIA 575
L G+FG V+ G+ G VAVK L GS D A E + +++H LV L Y +
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLA-EANLMKQLQHQRLVRL--YAVV 87
Query: 576 GDQRIAIY-DYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWR 634
+ I I +YMENG+L + L P G++ N + ++ ++
Sbjct: 88 TQEPIYIITEYMENGSLVDFLKT-PSGIKLTI------------NKLLDMAAQ------- 127
Query: 635 FRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEE 694
A +AF+ IHRD++A+++ + L +++DFGLA++ + +E
Sbjct: 128 --------IAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIED--NEY 174
Query: 695 IARGSPGYIPPEFAQPDS----DFPTPKSDVYCYGVVLLELIT-GKKPL-GDDYPEEKEG 748
AR + P ++ P++ F T KSDV+ +G++L E++T G+ P G PE
Sbjct: 175 TAREGAKF-PIKWTAPEAINYGTF-TIKSDVWSFGILLTEIVTHGRIPYPGMTNPE---- 228
Query: 749 NLVSWVRGLVRN-NKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGL 807
+++N +G R + P D P EE ++ LC + P RP+ + +
Sbjct: 229 --------VIQNLERGYRMVRP---DNCP----EELYQLMRLCWKERPEDRPTFDYLRSV 273
Query: 808 LKDI 811
L+D
Sbjct: 274 LEDF 277
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 141/334 (42%), Gaps = 73/334 (21%)
Query: 491 FEKPLLNI-TFADLLSATSNFDRGTLLAEGKFGPVYRGFLP----GGIHVAVKVLVHGST 545
FE P + FA L AT N ++ G+FG V G L I VA+K L G T
Sbjct: 28 FEDPTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 546 LTDQ-EAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLL--HDLPLGV 602
+ + E +G+ HPN++ L G + + +YMENG+L + L HD V
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV 146
Query: 603 QXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRD 662
IQ VG + G A + +L +HRD
Sbjct: 147 ------------------IQLVG-------------MLRGIASGMKYL---SDMGYVHRD 172
Query: 663 IKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIA---RGSPGYIPPEFAQPDS----DFP 715
+ A ++ ++ NL ++SDFGLA++ + D E A RG G IP + P++ F
Sbjct: 173 LAARNILINSNLVCKVSDFGLARVLED--DPEAAYTTRG--GKIPIRWTSPEAIAYRKF- 227
Query: 716 TPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDT 774
T SDV+ YG+VL E+++ G++P Y E +++ +A+D R
Sbjct: 228 TSASDVWSYGIVLWEVMSYGERP----YWEMSNQDVI-------------KAVDEGYRLP 270
Query: 775 GPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLL 808
P ++ C RP +QIV +L
Sbjct: 271 PPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 141/303 (46%), Gaps = 65/303 (21%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIA 575
L G+FG V+ G+ G VAVK L GS D A E + +++H LV L Y +
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLA-EANLMKQLQHQRLVRL--YAVV 73
Query: 576 GDQRIAIY-DYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWR 634
+ I I +YMENG+L + L P G++ N + ++ ++
Sbjct: 74 TQEPIYIITEYMENGSLVDFLKT-PSGIKLTI------------NKLLDMAAQ------- 113
Query: 635 FRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEE 694
A +AF+ IHR+++A+++ + L +++DFGLA++ + +E
Sbjct: 114 --------IAEGMAFIEERN---YIHRNLRAANILVSDTLSCKIADFGLARLIED--NEY 160
Query: 695 IARGSPGYIPPEFAQPDS----DFPTPKSDVYCYGVVLLELIT-GKKPL-GDDYPEEKEG 748
AR + P ++ P++ F T KSDV+ +G++L E++T G+ P G PE
Sbjct: 161 TAREGAKF-PIKWTAPEAINYGTF-TIKSDVWSFGILLTEIVTHGRIPYPGMTNPE---- 214
Query: 749 NLVSWVRGLVRN-NKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGL 807
+++N +G R + P D P EE ++ LC + P RP+ + +
Sbjct: 215 --------VIQNLERGYRMVRP---DNCP----EELYQLMRLCWKERPEDRPTFDYLRSV 259
Query: 808 LKD 810
L+D
Sbjct: 260 LED 262
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 141/334 (42%), Gaps = 73/334 (21%)
Query: 491 FEKPLLNI-TFADLLSATSNFDRGTLLAEGKFGPVYRGFLP----GGIHVAVKVLVHGST 545
FE P + FA L AT N ++ G+FG V G L I VA+K L G T
Sbjct: 28 FEDPTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 546 LTDQ-EAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLL--HDLPLGV 602
+ + E +G+ HPN++ L G + + +YMENG+L + L HD V
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV 146
Query: 603 QXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRD 662
IQ VG + G A + +L +HRD
Sbjct: 147 ------------------IQLVG-------------MLRGIASGMKYL---SDMGFVHRD 172
Query: 663 IKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIA---RGSPGYIPPEFAQPDS----DFP 715
+ A ++ ++ NL ++SDFGL+++ + D E A RG G IP + P++ F
Sbjct: 173 LAARNILINSNLVCKVSDFGLSRVLED--DPEAAYTTRG--GKIPIRWTSPEAIAYRKF- 227
Query: 716 TPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDT 774
T SDV+ YG+VL E+++ G++P Y E +++ +A+D R
Sbjct: 228 TSASDVWSYGIVLWEVMSYGERP----YWEMSNQDVI-------------KAVDEGYRLP 270
Query: 775 GPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLL 808
P ++ C RP +QIV +L
Sbjct: 271 PPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 129/301 (42%), Gaps = 59/301 (19%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIA 575
+ G+FG V+ G+ VA+K + G+ +++++ E E + ++ HP LV L G C+
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 576 GDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWRF 635
++++ME+G L + L +E LL
Sbjct: 74 QAPICLVFEFMEHGCLSDYLR----------------------TQRGLFAAETLLG---- 107
Query: 636 RHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEI 695
+ L +A+L C +IHRD+ A + + N ++SDFG+ + LD++
Sbjct: 108 ---MCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFV---LDDQY 158
Query: 696 ARGSPGYIPPEFAQPD----SDFPTPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNL 750
+ P ++A P+ S + + KSDV+ +GV++ E+ + GK P Y +
Sbjct: 159 TSSTGTKFPVKWASPEVFSFSRY-SSKSDVWSFGVLMWEVFSEGKIP----YENRSNSEV 213
Query: 751 VSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKD 810
V + + G R P++ T + M C + P RP+ +++ L +
Sbjct: 214 VEDI------STGFRLYKPRLASTHVYQIMNH-------CWKERPEDRPAFSRLLRQLAE 260
Query: 811 I 811
I
Sbjct: 261 I 261
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 141/334 (42%), Gaps = 73/334 (21%)
Query: 491 FEKPLLNI-TFADLLSATSNFDRGTLLAEGKFGPVYRGFLP----GGIHVAVKVLVHGST 545
FE P + FA L AT N ++ G+FG V G L I VA+K L G T
Sbjct: 28 FEDPTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 546 LTDQ-EAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLL--HDLPLGV 602
+ + E +G+ HPN++ L G + + +YMENG+L + L HD V
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV 146
Query: 603 QXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRD 662
IQ VG + G A + +L +HRD
Sbjct: 147 ------------------IQLVG-------------MLRGIASGMKYL---SDMGYVHRD 172
Query: 663 IKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIA---RGSPGYIPPEFAQPDS----DFP 715
+ A ++ ++ NL ++SDFGL+++ + D E A RG G IP + P++ F
Sbjct: 173 LAARNILINSNLVCKVSDFGLSRVLED--DPEAAYTTRG--GKIPIRWTSPEAIAYRKF- 227
Query: 716 TPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDT 774
T SDV+ YG+VL E+++ G++P Y E +++ +A+D R
Sbjct: 228 TSASDVWSYGIVLWEVMSYGERP----YWEMSNQDVI-------------KAVDEGYRLP 270
Query: 775 GPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLL 808
P ++ C RP +QIV +L
Sbjct: 271 PPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 141/334 (42%), Gaps = 73/334 (21%)
Query: 491 FEKPLLNI-TFADLLSATSNFDRGTLLAEGKFGPVYRGFLP----GGIHVAVKVLVHGST 545
FE P + FA L AT N ++ G+FG V G L I VA+K L G T
Sbjct: 28 FEDPTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 546 LTDQ-EAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLL--HDLPLGV 602
+ + E +G+ HPN++ L G + + +YMENG+L + L HD V
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV 146
Query: 603 QXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRD 662
IQ VG + G A + +L +HRD
Sbjct: 147 ------------------IQLVG-------------MLRGIASGMKYL---SDMGYVHRD 172
Query: 663 IKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIA---RGSPGYIPPEFAQPDS----DFP 715
+ A ++ ++ NL ++SDFGL+++ + D E A RG G IP + P++ F
Sbjct: 173 LAARNILINSNLVCKVSDFGLSRVLED--DPEAAYTTRG--GKIPIRWTSPEAIAYRKF- 227
Query: 716 TPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDT 774
T SDV+ YG+VL E+++ G++P Y E +++ +A+D R
Sbjct: 228 TSASDVWSYGIVLWEVMSYGERP----YWEMSNQDVI-------------KAVDEGYRLP 270
Query: 775 GPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLL 808
P ++ C RP +QIV +L
Sbjct: 271 PPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 129/301 (42%), Gaps = 59/301 (19%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIA 575
+ G+FG V+ G+ VA+K + G+ +++++ E E + ++ HP LV L G C+
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 76
Query: 576 GDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWRF 635
++++ME+G L + L +E LL
Sbjct: 77 QAPICLVFEFMEHGCLSDYLR----------------------TQRGLFAAETLLG---- 110
Query: 636 RHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEI 695
+ L +A+L C +IHRD+ A + + N ++SDFG+ + LD++
Sbjct: 111 ---MCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFV---LDDQY 161
Query: 696 ARGSPGYIPPEFAQPD----SDFPTPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNL 750
+ P ++A P+ S + + KSDV+ +GV++ E+ + GK P Y +
Sbjct: 162 TSSTGTKFPVKWASPEVFSFSRY-SSKSDVWSFGVLMWEVFSEGKIP----YENRSNSEV 216
Query: 751 VSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKD 810
V + + G R P++ T + M C + P RP+ +++ L +
Sbjct: 217 VEDI------STGFRLYKPRLASTHVYQIMNH-------CWRERPEDRPAFSRLLRQLAE 263
Query: 811 I 811
I
Sbjct: 264 I 264
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 129/301 (42%), Gaps = 59/301 (19%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIA 575
+ G+FG V+ G+ VA+K + G+ +++++ E E + ++ HP LV L G C+
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 71
Query: 576 GDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWRF 635
++++ME+G L + L +E LL
Sbjct: 72 QAPICLVFEFMEHGCLSDYLR----------------------TQRGLFAAETLLG---- 105
Query: 636 RHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEI 695
+ L +A+L C +IHRD+ A + + N ++SDFG+ + LD++
Sbjct: 106 ---MCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFV---LDDQY 156
Query: 696 ARGSPGYIPPEFAQPD----SDFPTPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNL 750
+ P ++A P+ S + + KSDV+ +GV++ E+ + GK P Y +
Sbjct: 157 TSSTGTKFPVKWASPEVFSFSRY-SSKSDVWSFGVLMWEVFSEGKIP----YENRSNSEV 211
Query: 751 VSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKD 810
V + + G R P++ T + M C + P RP+ +++ L +
Sbjct: 212 VEDI------STGFRLYKPRLASTHVYQIMNH-------CWKERPEDRPAFSRLLRQLAE 258
Query: 811 I 811
I
Sbjct: 259 I 259
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 128/301 (42%), Gaps = 59/301 (19%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIA 575
+ G+FG V+ G+ VA+K + GS +++ + E E + ++ HP LV L G C+
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGS-MSEDDFIEEAEVMMKLSHPKLVQLYGVCLE 93
Query: 576 GDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWRF 635
++++ME+G L + L +E LL
Sbjct: 94 QAPICLVFEFMEHGCLSDYLR----------------------TQRGLFAAETLLG---- 127
Query: 636 RHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEI 695
+ L +A+L C +IHRD+ A + + N ++SDFG+ + LD++
Sbjct: 128 ---MCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFV---LDDQY 178
Query: 696 ARGSPGYIPPEFAQPD----SDFPTPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNL 750
+ P ++A P+ S + + KSDV+ +GV++ E+ + GK P Y +
Sbjct: 179 TSSTGTKFPVKWASPEVFSFSRY-SSKSDVWSFGVLMWEVFSEGKIP----YENRSNSEV 233
Query: 751 VSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKD 810
V + + G R P++ T + M C + P RP+ +++ L +
Sbjct: 234 VEDI------STGFRLYKPRLASTHVYQIMNH-------CWKERPEDRPAFSRLLRQLAE 280
Query: 811 I 811
I
Sbjct: 281 I 281
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 140/334 (41%), Gaps = 73/334 (21%)
Query: 491 FEKPLLNI-TFADLLSATSNFDRGTLLAEGKFGPVYRGFLP----GGIHVAVKVLVHGST 545
FE P + FA L AT N ++ G+FG V G L I VA+K L G T
Sbjct: 28 FEDPTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 546 LTDQ-EAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLL--HDLPLGV 602
+ + E +G+ HPN++ L G + + +YMENG+L + L HD V
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV 146
Query: 603 QXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRD 662
IQ VG + G A + +L +HRD
Sbjct: 147 ------------------IQLVG-------------MLRGIASGMKYL---SDMGYVHRD 172
Query: 663 IKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIA---RGSPGYIPPEFAQPDS----DFP 715
+ A ++ ++ NL ++SDFGL ++ + D E A RG G IP + P++ F
Sbjct: 173 LAARNILINSNLVCKVSDFGLGRVLED--DPEAAYTTRG--GKIPIRWTSPEAIAYRKF- 227
Query: 716 TPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDT 774
T SDV+ YG+VL E+++ G++P Y E +++ +A+D R
Sbjct: 228 TSASDVWSYGIVLWEVMSYGERP----YWEMSNQDVI-------------KAVDEGYRLP 270
Query: 775 GPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLL 808
P ++ C RP +QIV +L
Sbjct: 271 PPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 139/303 (45%), Gaps = 65/303 (21%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIA 575
L G+ G V+ G+ G VAVK L GS D A E + +++H LV L Y +
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLA-EANLMKQLQHQRLVRL--YAVV 77
Query: 576 GDQRIAIY-DYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWR 634
+ I I +YMENG+L + L P G++ N + ++ ++
Sbjct: 78 TQEPIYIITEYMENGSLVDFLKT-PSGIKLTI------------NKLLDMAAQ------- 117
Query: 635 FRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEE 694
A +AF+ IHRD++A+++ + L +++DFGLA++ + E
Sbjct: 118 --------IAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDA--EX 164
Query: 695 IARGSPGYIPPEFAQPDS----DFPTPKSDVYCYGVVLLELIT-GKKPL-GDDYPEEKEG 748
AR + P ++ P++ F T KSDV+ +G++L E++T G+ P G PE
Sbjct: 165 TAREGAKF-PIKWTAPEAINYGTF-TIKSDVWSFGILLTEIVTHGRIPYPGMTNPE---- 218
Query: 749 NLVSWVRGLVRN-NKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGL 807
+++N +G R + P D P EE ++ LC + P RP+ + +
Sbjct: 219 --------VIQNLERGYRMVRP---DNCP----EELYQLMRLCWKERPEDRPTFDYLRSV 263
Query: 808 LKD 810
L+D
Sbjct: 264 LED 266
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 75/301 (24%), Positives = 128/301 (42%), Gaps = 60/301 (19%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIA 575
L G+FG V G G VAVK++ GS +++ E +E + + ++ HP LV G C
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSK 74
Query: 576 GDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWRF 635
+ +Y+ NG L N L G++
Sbjct: 75 EYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLL--------------------------- 107
Query: 636 RHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEI 695
++ +AFL S IHRD+ A + +D +L ++SDFG+ + LD++
Sbjct: 108 --EMCYDVCEGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYV---LDDQY 159
Query: 696 ARGSPGYIPPEFAQPD--SDFP-TPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNLV 751
P +++ P+ F + KSDV+ +G+++ E+ + GK P +L
Sbjct: 160 VSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPY----------DLY 209
Query: 752 SWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDI 811
+ +++ ++G R P + + +I Y C +LP KRP+ QQ LL I
Sbjct: 210 TNSEVVLKVSQGHRLYRPHLAS-------DTIYQIMYSCWHELPEKRPTFQQ---LLSSI 259
Query: 812 E 812
E
Sbjct: 260 E 260
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 99/228 (43%), Gaps = 37/228 (16%)
Query: 514 TLLAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYC 573
T + G FG VY+G G + V + +V + Q E+ L + +H N++ GY
Sbjct: 42 TRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGY- 100
Query: 574 IAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTW 633
+ D + + E +L LH Q
Sbjct: 101 MTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLI------------------------- 135
Query: 634 RFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKI---FGNG 690
IA TA+ + +LH + IIHRD+K+++++L L ++ DFGLA + +
Sbjct: 136 ----DIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188
Query: 691 LDEEIARGSPGYIPPEFAQPDSDFP-TPKSDVYCYGVVLLELITGKKP 737
E GS ++ PE + + P + +SDVY YG+VL EL+TG+ P
Sbjct: 189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELP 236
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 141/334 (42%), Gaps = 73/334 (21%)
Query: 491 FEKPLLNI-TFADLLSATSNFDRGTLLAEGKFGPVYRGFLP----GGIHVAVKVLVHGST 545
+E P + FA L AT N ++ G+FG V G L I VA+K L G T
Sbjct: 28 YEDPTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 546 LTDQ-EAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLL--HDLPLGV 602
+ + E +G+ HPN++ L G + + +YMENG+L + L HD V
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV 146
Query: 603 QXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRD 662
IQ VG + G A + +L +HRD
Sbjct: 147 ------------------IQLVG-------------MLRGIASGMKYL---SDMGYVHRD 172
Query: 663 IKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIA---RGSPGYIPPEFAQPDS----DFP 715
+ A ++ ++ NL ++SDFGL+++ + D E A RG G IP + P++ F
Sbjct: 173 LAARNILINSNLVCKVSDFGLSRVLED--DPEAAYTTRG--GKIPIRWTSPEAIAYRKF- 227
Query: 716 TPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDT 774
T SDV+ YG+VL E+++ G++P Y E +++ +A+D R
Sbjct: 228 TSASDVWSYGIVLWEVMSYGERP----YWEMSNQDVI-------------KAVDEGYRLP 270
Query: 775 GPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLL 808
P ++ C RP +QIV +L
Sbjct: 271 PPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 141/334 (42%), Gaps = 73/334 (21%)
Query: 491 FEKPLLNI-TFADLLSATSNFDRGTLLAEGKFGPVYRGFLP----GGIHVAVKVLVHGST 545
+E P + FA L AT N ++ G+FG V G L I VA+K L G T
Sbjct: 28 YEDPTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 546 LTDQ-EAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLL--HDLPLGV 602
+ + E +G+ HPN++ L G + + +YMENG+L + L HD V
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV 146
Query: 603 QXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRD 662
IQ VG + G A + +L +HRD
Sbjct: 147 ------------------IQLVG-------------MLRGIASGMKYL---SDMGYVHRD 172
Query: 663 IKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIA---RGSPGYIPPEFAQPDS----DFP 715
+ A ++ ++ NL ++SDFGL+++ + D E A RG G IP + P++ F
Sbjct: 173 LAARNILINSNLVCKVSDFGLSRVLED--DPEAAYTTRG--GKIPIRWTSPEAIAYRKF- 227
Query: 716 TPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDT 774
T SDV+ YG+VL E+++ G++P Y E +++ +A+D R
Sbjct: 228 TSASDVWSYGIVLWEVMSYGERP----YWEMSNQDVI-------------KAVDEGYRLP 270
Query: 775 GPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLL 808
P ++ C RP +QIV +L
Sbjct: 271 PPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 141/334 (42%), Gaps = 73/334 (21%)
Query: 491 FEKPLLNI-TFADLLSATSNFDRGTLLAEGKFGPVYRGFLP----GGIHVAVKVLVHGST 545
+E P + FA L AT N ++ G+FG V G L I VA+K L G T
Sbjct: 26 YEDPTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 84
Query: 546 LTDQ-EAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLL--HDLPLGV 602
+ + E +G+ HPN++ L G + + +YMENG+L + L HD V
Sbjct: 85 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV 144
Query: 603 QXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRD 662
IQ VG + G A + +L +HRD
Sbjct: 145 ------------------IQLVG-------------MLRGIASGMKYL---SDMGYVHRD 170
Query: 663 IKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIA---RGSPGYIPPEFAQPDS----DFP 715
+ A ++ ++ NL ++SDFGL+++ + D E A RG G IP + P++ F
Sbjct: 171 LAARNILINSNLVCKVSDFGLSRVLED--DPEAAYTTRG--GKIPIRWTSPEAIAYRKF- 225
Query: 716 TPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDT 774
T SDV+ YG+VL E+++ G++P Y E +++ +A+D R
Sbjct: 226 TSASDVWSYGIVLWEVMSYGERP----YWEMSNQDVI-------------KAVDEGYRLP 268
Query: 775 GPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLL 808
P ++ C RP +QIV +L
Sbjct: 269 PPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 302
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 137/324 (42%), Gaps = 72/324 (22%)
Query: 500 FADLLSATSNFDRGTLLAEGKFGPVYRGFLP----GGIHVAVKVLVHGSTLTDQ-EAARE 554
FA L AT N ++ G+FG V G L I VA+K L G T + + E
Sbjct: 9 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 67
Query: 555 LEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLL--HDLPLGVQXXXXXXXXX 612
+G+ HPN++ L G + + +YMENG+L + L HD V
Sbjct: 68 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV---------- 117
Query: 613 XXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDM 672
IQ VG + G A + +L +HRD+ A ++ ++
Sbjct: 118 --------IQLVG-------------MLRGIASGMKYLS---DMGYVHRDLAARNILINS 153
Query: 673 NLEPRLSDFGLAKIFGNGLDEEIA---RGSPGYIPPEFAQPDS----DFPTPKSDVYCYG 725
NL ++SDFGL+++ + D E A RG G IP + P++ F T SDV+ YG
Sbjct: 154 NLVCKVSDFGLSRVLED--DPEAAYTTRG--GKIPIRWTSPEAIAYRKF-TSASDVWSYG 208
Query: 726 VVLLELIT-GKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEAL 784
+VL E+++ G++P Y E +++ +A+D R P
Sbjct: 209 IVLWEVMSYGERP----YWEMSNQDVI-------------KAVDEGYRLPPPMDCPAALY 251
Query: 785 KIGYLCTADLPLKRPSMQQIVGLL 808
++ C RP +QIV +L
Sbjct: 252 QLMLDCWQKDRNNRPKFEQIVSIL 275
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 136/316 (43%), Gaps = 49/316 (15%)
Query: 508 SNFDRGTLLAEGKFGPVYRGFLPG------GIHVAVKVLVHGSTLTDQEA-ARELEYLGR 560
+N G L G FG V G + VAVK+L + ++EA EL+ +
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 561 I-KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLH-DLPLGVQXXXXXXXXXXXXXXX 618
+ +H N+V L G C G + I +Y G+L N L P G++
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSH-------- 157
Query: 619 NSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRL 678
N + + S LL F ++A G +AFL S IHRD+ A +V L ++
Sbjct: 158 NPEEQLSSRDLL---HFSSQVAQG----MAFL---ASKNCIHRDVAARNVLLTNGHVAKI 207
Query: 679 SDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT-G 734
DFGLA+ N I +G+ +P ++ P+S F T +SDV+ YG++L E+ + G
Sbjct: 208 GDFGLARDIMND-SNYIVKGN-ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLG 265
Query: 735 KKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADL 794
P YP G++ N+K + + + P + I C A
Sbjct: 266 LNP----YP------------GILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALE 309
Query: 795 PLKRPSMQQIVGLLKD 810
P RP+ QQI L++
Sbjct: 310 PTHRPTFQQICSFLQE 325
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 137/324 (42%), Gaps = 72/324 (22%)
Query: 500 FADLLSATSNFDRGTLLAEGKFGPVYRGFLP----GGIHVAVKVLVHGSTLTDQ-EAARE 554
FA L AT N ++ G+FG V G L I VA+K L G T + + E
Sbjct: 26 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 84
Query: 555 LEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLL--HDLPLGVQXXXXXXXXX 612
+G+ HPN++ L G + + +YMENG+L + L HD V
Sbjct: 85 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV---------- 134
Query: 613 XXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDM 672
IQ VG + G A + +L +HRD+ A ++ ++
Sbjct: 135 --------IQLVG-------------MLRGIASGMKYLS---DMGYVHRDLAARNILINS 170
Query: 673 NLEPRLSDFGLAKIFGNGLDEEIA---RGSPGYIPPEFAQPDS----DFPTPKSDVYCYG 725
NL ++SDFGL+++ + D E A RG G IP + P++ F T SDV+ YG
Sbjct: 171 NLVCKVSDFGLSRVLED--DPEAAYTTRG--GKIPIRWTSPEAIAYRKF-TSASDVWSYG 225
Query: 726 VVLLELIT-GKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEAL 784
+VL E+++ G++P Y E +++ +A+D R P
Sbjct: 226 IVLWEVMSYGERP----YWEMSNQDVI-------------KAVDEGYRLPPPMDCPAALY 268
Query: 785 KIGYLCTADLPLKRPSMQQIVGLL 808
++ C RP +QIV +L
Sbjct: 269 QLMLDCWQKDRNNRPKFEQIVSIL 292
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 128/301 (42%), Gaps = 59/301 (19%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIA 575
+ G+FG V+ G+ VA+K + G+ +++++ E E + ++ HP LV L G C+
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 74
Query: 576 GDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWRF 635
+ ++ME+G L + L +E LL
Sbjct: 75 QAPICLVTEFMEHGCLSDYLR----------------------TQRGLFAAETLLG---- 108
Query: 636 RHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEI 695
+ L +A+L C +IHRD+ A + + N ++SDFG+ + LD++
Sbjct: 109 ---MCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFV---LDDQY 159
Query: 696 ARGSPGYIPPEFAQPD----SDFPTPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNL 750
+ P ++A P+ S + + KSDV+ +GV++ E+ + GK P Y +
Sbjct: 160 TSSTGTKFPVKWASPEVFSFSRY-SSKSDVWSFGVLMWEVFSEGKIP----YENRSNSEV 214
Query: 751 VSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKD 810
V + + G R P++ T +I C + P RP+ +++ L +
Sbjct: 215 VEDI------STGFRLYKPRLAST-------HVYQIMNHCWRERPEDRPAFSRLLRQLAE 261
Query: 811 I 811
I
Sbjct: 262 I 262
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 141/334 (42%), Gaps = 73/334 (21%)
Query: 491 FEKPLLNI-TFADLLSATSNFDRGTLLAEGKFGPVYRGFLP----GGIHVAVKVLVHGST 545
FE P + FA L AT N ++ G+FG V G L I VA+K L G T
Sbjct: 28 FEDPTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 546 LTDQ-EAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLL--HDLPLGV 602
+ + E +G+ HPN++ L G + + + MENG+L + L HD V
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV 146
Query: 603 QXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRD 662
IQ VG + G A + +L + +HRD
Sbjct: 147 ------------------IQLVG-------------MLRGIASGMKYLSDMGA---VHRD 172
Query: 663 IKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIA---RGSPGYIPPEFAQPDS----DFP 715
+ A ++ ++ NL ++SDFGL+++ + D E A RG G IP + P++ F
Sbjct: 173 LAARNILINSNLVCKVSDFGLSRVLED--DPEAAYTTRG--GKIPIRWTSPEAIAYRKF- 227
Query: 716 TPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDT 774
T SDV+ YG+VL E+++ G++P Y E +++ +A+D R
Sbjct: 228 TSASDVWSYGIVLWEVMSYGERP----YWEMSNQDVI-------------KAVDEGYRLP 270
Query: 775 GPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLL 808
P ++ C RP +QIV +L
Sbjct: 271 PPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|3T6Q|A Chain A, Crystal Structure Of Mouse Rp105MD-1 Complex
pdb|3T6Q|B Chain B, Crystal Structure Of Mouse Rp105MD-1 Complex
Length = 606
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 140/296 (47%), Gaps = 12/296 (4%)
Query: 43 SVPDTTIGKLSKLQSLDLSENNITALPSDLWSLGSLKSLNLSYNRISGSLPSNIGNFGLL 102
++ T S LQ LDL+ +++ LPS L L +LK L LS N+ + NF L
Sbjct: 268 NISSNTFHCFSGLQELDLTATHLSELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSL 327
Query: 103 EVFDLSNNNFSGEI-PAAISSLVSLRVLKLDGNMFQWS--IPPGLLNCQSLVTVDLSMNQ 159
+ N E+ + +L +LR L L + + S L N L +++LS N+
Sbjct: 328 THLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNE 387
Query: 160 LNGSLPDGFGAAFPKLKSLNLAGNEIKGRDTH--FAGLKSITNLNISGNLFQGSVMGVF- 216
+ F P+L+ L+LA +K +D F L + LN+S +L S +F
Sbjct: 388 PLSLKTEAFKEC-PQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFD 446
Query: 217 -LESLEVIDLRSNQF-QGHISQVQFNSSYNWSRLVYVDLSENQLSGEIFHNFSQAQNLKH 274
L +L+ ++L+ N F +G+I + NS RL + LS LS H F+ + + H
Sbjct: 447 GLPALQHLNLQGNHFPKGNIQKT--NSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNH 504
Query: 275 LSLAYNRFTRQEFPQIGTLLGLEHLNLSRTSLIGDIPSEILQLSSLHTLDLSMNHL 330
+ L++NR T + L G+ +LNL+ + +PS + LS T++L N L
Sbjct: 505 VDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPL 559
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 133/317 (41%), Gaps = 14/317 (4%)
Query: 77 SLKSLNLSYNRISGSLPSNIGNFGLLEVFDLSNNNFSGEIPAAISSLVSLRVLKLDGNMF 136
S++S+NL + + F L+ DL+ + S E+P+ + L +L+ L L N F
Sbjct: 255 SVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKF 313
Query: 137 QWSIPPGLLNCQSLVTVDLSMNQLNGSLPDGFGAAFPKLKSLNLAGNEIKGRDT---HFA 193
+ N SL + + N L G L+ L+L+ ++I+ D
Sbjct: 314 ENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLR 373
Query: 194 GLKSITNLNISGNLFQGSVMGVFLES--LEVIDLRSNQFQGHISQVQFNSSYNWSRLVYV 251
L + +LN+S N F E LE++DL + + +Q F N L +
Sbjct: 374 NLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQ---NLHLLKVL 430
Query: 252 DLSENQLSGEIFHNFSQAQNLKHLSLAYNRFTR---QEFPQIGTLLGLEHLNLSRTSLIG 308
+LS + L F L+HL+L N F + Q+ + TL LE L LS L
Sbjct: 431 NLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSS 490
Query: 309 DIPSEILQLSSLHTLDLSMNHLTGQIPTVSAKNLGI-IDMSHNNLSGEIPASLLEKLPQM 367
L ++ +DLS N LT + GI ++++ N++S +P SLL L Q
Sbjct: 491 IDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGIYLNLASNHISIILP-SLLPILSQQ 549
Query: 368 ERFNFSYNNLTLCASEL 384
N N L S +
Sbjct: 550 RTINLRQNPLDCTCSNI 566
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 98/235 (41%), Gaps = 39/235 (16%)
Query: 177 SLNLAGNEIKGRDTHFAGLKSITNLNISGN-----LFQG----SVMGVFLESLEVID--- 224
SLNL GN+I G + +LN G +F+G ++ ++L + E +D
Sbjct: 183 SLNLNGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDED 242
Query: 225 -------------LRSNQFQGH-ISQVQFNSSYNWSRLVYVDLSENQLSGEIFHNFSQAQ 270
+ S Q H + N+ + +S L +DL+ LS E+
Sbjct: 243 ISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLS 301
Query: 271 NLKHLSLAYNRFTRQEFPQIGTLLGLEHLNLSRTSLIGDIPSEILQ-LSSLHTLDLSMNH 329
LK L L+ N+F L HL++ + ++ + L+ L +L LDLS +
Sbjct: 302 TLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHD- 360
Query: 330 LTGQIPTVSAKNLGIIDMSH---NNLSGEIPASL----LEKLPQMERFNFSYNNL 377
I T NL + ++SH NLS P SL ++ PQ+E + ++ L
Sbjct: 361 ---DIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRL 412
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 132/306 (43%), Gaps = 65/306 (21%)
Query: 515 LLAEGKFGPVYRGFL--PG--GIHVAVKVLVHGSTLTDQ-EAARELEYLGRIKHPNLVPL 569
++ G+FG V G L PG + VA+K L G T + + E +G+ HPN+V L
Sbjct: 50 VIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHL 109
Query: 570 TGYCIAGDQRIAIYDYMENGNLQNLL--HDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSE 627
G G + + ++MENG L L HD V IQ VG
Sbjct: 110 EGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTV------------------IQLVG-- 149
Query: 628 GLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIF 687
IA G R LA + + +HRD+ A ++ ++ NL ++SDFGL+++
Sbjct: 150 -------MLRGIAAGM-RYLADMGY------VHRDLAARNILVNSNLVCKVSDFGLSRVI 195
Query: 688 GNGLDEEIARGSPGYIPPEFAQPDS----DFPTPKSDVYCYGVVLLELIT-GKKPLGDDY 742
+ E + + G IP + P++ F T SDV+ YG+V+ E+++ G++P D
Sbjct: 196 EDD-PEAVYTTTGGKIPVRWTAPEAIQYRKF-TSASDVWSYGIVMWEVMSYGERPYWD-- 251
Query: 743 PEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQ 802
+ N +AI+ R P ++ C +RP +
Sbjct: 252 ---------------MSNQDVIKAIEEGYRLPAPMDCPAGLHQLMLDCWQKERAERPKFE 296
Query: 803 QIVGLL 808
QIVG+L
Sbjct: 297 QIVGIL 302
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 104/231 (45%), Gaps = 41/231 (17%)
Query: 513 GTLLAEGKFGPVYRGFLPGGIHVAVKVL-VHGSTLTDQEAAR-ELEYLGRIKHPNLVPLT 570
G + G FG VY+G G VAVK+L V T +A + E+ L + +H N++
Sbjct: 13 GQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 70
Query: 571 GYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLL 630
GY A Q + + E +L + LH + +
Sbjct: 71 GYSTA-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI---------------------- 107
Query: 631 TTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKI---F 687
IA TA+ + +LH + IIHRD+K+++++L +L ++ DFGLA + +
Sbjct: 108 -------DIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRW 157
Query: 688 GNGLDEEIARGSPGYIPPEFAQPDSDFPTP-KSDVYCYGVVLLELITGKKP 737
E GS ++ PE + P +SDVY +G+VL EL+TG+ P
Sbjct: 158 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 136/324 (41%), Gaps = 72/324 (22%)
Query: 500 FADLLSATSNFDRGTLLAEGKFGPVYRGFLP----GGIHVAVKVLVHGSTLTDQ-EAARE 554
FA L AT N ++ G+FG V G L I VA+K L G T + + E
Sbjct: 9 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 67
Query: 555 LEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLL--HDLPLGVQXXXXXXXXX 612
+G+ HPN++ L G + + + MENG+L + L HD V
Sbjct: 68 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV---------- 117
Query: 613 XXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDM 672
IQ VG + G A + +L +HRD+ A ++ ++
Sbjct: 118 --------IQLVG-------------MLRGIASGMKYLS---DMGYVHRDLAARNILINS 153
Query: 673 NLEPRLSDFGLAKIFGNGLDEEIA---RGSPGYIPPEFAQPDS----DFPTPKSDVYCYG 725
NL ++SDFGL+++ + D E A RG G IP + P++ F T SDV+ YG
Sbjct: 154 NLVCKVSDFGLSRVLED--DPEAAYTTRG--GKIPIRWTSPEAIAYRKF-TSASDVWSYG 208
Query: 726 VVLLELIT-GKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEAL 784
+VL E+++ G++P Y E +++ +A+D R P
Sbjct: 209 IVLWEVMSYGERP----YWEMSNQDVI-------------KAVDEGYRLPPPMDCPAALY 251
Query: 785 KIGYLCTADLPLKRPSMQQIVGLL 808
++ C RP +QIV +L
Sbjct: 252 QLMLDCWQKDRNNRPKFEQIVSIL 275
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 140/334 (41%), Gaps = 73/334 (21%)
Query: 491 FEKPLLNI-TFADLLSATSNFDRGTLLAEGKFGPVYRGFLP----GGIHVAVKVLVHGST 545
+E P + FA L AT N ++ G+FG V G L I VA+K L G T
Sbjct: 28 YEDPTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 546 LTDQ-EAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLL--HDLPLGV 602
+ + E +G+ HPN++ L G + + + MENG+L + L HD V
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV 146
Query: 603 QXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRD 662
IQ VG + G A + +L +HRD
Sbjct: 147 ------------------IQLVG-------------MLRGIASGMKYL---SDMGYVHRD 172
Query: 663 IKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIA---RGSPGYIPPEFAQPDS----DFP 715
+ A ++ ++ NL ++SDFGL+++ + D E A RG G IP + P++ F
Sbjct: 173 LAARNILINSNLVCKVSDFGLSRVLED--DPEAAYTTRG--GKIPIRWTSPEAIAYRKF- 227
Query: 716 TPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDT 774
T SDV+ YG+VL E+++ G++P Y E +++ +A+D R
Sbjct: 228 TSASDVWSYGIVLWEVMSYGERP----YWEMSNQDVI-------------KAVDEGYRLP 270
Query: 775 GPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLL 808
P ++ C RP +QIV +L
Sbjct: 271 PPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 129/304 (42%), Gaps = 59/304 (19%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIA 575
+ G+FG V+ G+ VA+K + G+ +++++ E E + ++ HP LV L G C+
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 576 GDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWRF 635
++++ME+G L + L +E LL
Sbjct: 74 QAPICLVFEFMEHGCLSDYLR----------------------TQRGLFAAETLL----- 106
Query: 636 RHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEI 695
+ L +A+L +IHRD+ A + + N ++SDFG+ + LD++
Sbjct: 107 --GMCLDVCEGMAYLEEA---SVIHRDLAARNCLVGENQVIKVSDFGMTRFV---LDDQY 158
Query: 696 ARGSPGYIPPEFAQPD----SDFPTPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNL 750
+ P ++A P+ S + + KSDV+ +GV++ E+ + GK P Y +
Sbjct: 159 TSSTGTKFPVKWASPEVFSFSRY-SSKSDVWSFGVLMWEVFSEGKIP----YENRSNSEV 213
Query: 751 VSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKD 810
V + + G R P++ T + M C + P RP+ +++ L
Sbjct: 214 VEDI------STGFRLYKPRLASTHVYQIMNH-------CWKERPEDRPAFSRLLRQLAA 260
Query: 811 IEST 814
I ++
Sbjct: 261 IAAS 264
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 133/315 (42%), Gaps = 49/315 (15%)
Query: 508 SNFDRGTLLAEGKFGPVYRGFLPG------GIHVAVKVLVHGSTLTDQEA-ARELEYLGR 560
+N G L G FG V G + VAVK+L + ++EA EL+ +
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 561 I-KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXN 619
+ +H N+V L G C G + I +Y G+L N L + N
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL-------RRKSRVLETDPAFAIAN 158
Query: 620 SIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLS 679
S + + LL F ++A G +AFL S IHRD+ A +V L ++
Sbjct: 159 S--TLSTRDLL---HFSSQVAQG----MAFL---ASKNCIHRDVAARNVLLTNGHVAKIG 206
Query: 680 DFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT-GK 735
DFGLA+ N I +G+ +P ++ P+S F T +SDV+ YG++L E+ + G
Sbjct: 207 DFGLARDIMND-SNYIVKGN-ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGL 264
Query: 736 KPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLP 795
P YP G++ N+K + + + P + I C A P
Sbjct: 265 NP----YP------------GILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEP 308
Query: 796 LKRPSMQQIVGLLKD 810
RP+ QQI L++
Sbjct: 309 THRPTFQQICSFLQE 323
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 132/315 (41%), Gaps = 49/315 (15%)
Query: 508 SNFDRGTLLAEGKFGPVYRGFLPG------GIHVAVKVLVHGSTLTDQEA-ARELEYLGR 560
+N G L G FG V G + VAVK+L + ++EA EL+ +
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 561 I-KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXN 619
+ +H N+V L G C G + I +Y G+L N L + N
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL-------RRKSRVLETDPAFAIAN 158
Query: 620 SIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLS 679
S + LL F ++A G +AFL S IHRD+ A +V L ++
Sbjct: 159 S--TASTRDLL---HFSSQVAQG----MAFL---ASKNCIHRDVAARNVLLTNGHVAKIG 206
Query: 680 DFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT-GK 735
DFGLA+ N I +G+ +P ++ P+S F T +SDV+ YG++L E+ + G
Sbjct: 207 DFGLARDIMND-SNYIVKGN-ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGL 264
Query: 736 KPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLP 795
P YP G++ N+K + + + P + I C A P
Sbjct: 265 NP----YP------------GILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEP 308
Query: 796 LKRPSMQQIVGLLKD 810
RP+ QQI L++
Sbjct: 309 THRPTFQQICSFLQE 323
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 113/236 (47%), Gaps = 51/236 (21%)
Query: 513 GTLLAEGKFGPVYRGFLPGGIHVAVKVL-VHGSTLTDQEAAR-ELEYLGRIKHPNLVPLT 570
G + G FG VY+G G VAVK+L V T +A + E+ L + +H N++
Sbjct: 29 GQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 86
Query: 571 GYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLL 630
GY A Q + + E +L + LH SE
Sbjct: 87 GYSTA-PQLAIVTQWCEGSSLYHHLH----------------------------ASET-- 115
Query: 631 TTWRFRHK----IALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLA-- 684
+F K IA TAR + +LH + IIHRD+K+++++L + ++ DFGLA
Sbjct: 116 ---KFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATE 169
Query: 685 --KIFGNGLDEEIARGSPGYIPPEFAQ-PDSDFPTPKSDVYCYGVVLLELITGKKP 737
+ G+ E+++ GS ++ PE + DS+ + +SDVY +G+VL EL+TG+ P
Sbjct: 170 KSRWSGSHQFEQLS-GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 103/231 (44%), Gaps = 41/231 (17%)
Query: 513 GTLLAEGKFGPVYRGFLPGGIHVAVKVL-VHGSTLTDQEAAR-ELEYLGRIKHPNLVPLT 570
G + G FG VY+G G VAVK+L V T +A + E+ L + +H N++
Sbjct: 18 GQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 75
Query: 571 GYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLL 630
GY Q + + E +L + LH + +
Sbjct: 76 GYS-TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI---------------------- 112
Query: 631 TTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKI---F 687
IA TA+ + +LH + IIHRD+K+++++L +L ++ DFGLA + +
Sbjct: 113 -------DIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRW 162
Query: 688 GNGLDEEIARGSPGYIPPEFAQPDSDFPTP-KSDVYCYGVVLLELITGKKP 737
E GS ++ PE + P +SDVY +G+VL EL+TG+ P
Sbjct: 163 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 103/231 (44%), Gaps = 41/231 (17%)
Query: 513 GTLLAEGKFGPVYRGFLPGGIHVAVKVL-VHGSTLTDQEAAR-ELEYLGRIKHPNLVPLT 570
G + G FG VY+G G VAVK+L V T +A + E+ L + +H N++
Sbjct: 15 GQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 72
Query: 571 GYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLL 630
GY Q + + E +L + LH + +
Sbjct: 73 GYS-TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI---------------------- 109
Query: 631 TTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKI---F 687
IA TA+ + +LH + IIHRD+K+++++L +L ++ DFGLA + +
Sbjct: 110 -------DIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRW 159
Query: 688 GNGLDEEIARGSPGYIPPEFAQPDSDFPTP-KSDVYCYGVVLLELITGKKP 737
E GS ++ PE + P +SDVY +G+VL EL+TG+ P
Sbjct: 160 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 210
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 103/231 (44%), Gaps = 41/231 (17%)
Query: 513 GTLLAEGKFGPVYRGFLPGGIHVAVKVL-VHGSTLTDQEAAR-ELEYLGRIKHPNLVPLT 570
G + G FG VY+G G VAVK+L V T +A + E+ L + +H N++
Sbjct: 40 GQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 97
Query: 571 GYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLL 630
GY Q + + E +L + LH + +
Sbjct: 98 GYS-TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI---------------------- 134
Query: 631 TTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKI---F 687
IA TA+ + +LH + IIHRD+K+++++L +L ++ DFGLA + +
Sbjct: 135 -------DIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRW 184
Query: 688 GNGLDEEIARGSPGYIPPEFAQPDSDFPTP-KSDVYCYGVVLLELITGKKP 737
E GS ++ PE + P +SDVY +G+VL EL+TG+ P
Sbjct: 185 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 235
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 103/231 (44%), Gaps = 41/231 (17%)
Query: 513 GTLLAEGKFGPVYRGFLPGGIHVAVKVL-VHGSTLTDQEAAR-ELEYLGRIKHPNLVPLT 570
G + G FG VY+G G VAVK+L V T +A + E+ L + +H N++
Sbjct: 41 GQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 98
Query: 571 GYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLL 630
GY Q + + E +L + LH + +
Sbjct: 99 GYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI---------------------- 135
Query: 631 TTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKI---F 687
IA TA+ + +LH + IIHRD+K+++++L +L ++ DFGLA + +
Sbjct: 136 -------DIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRW 185
Query: 688 GNGLDEEIARGSPGYIPPEFAQPDSDFPTP-KSDVYCYGVVLLELITGKKP 737
E GS ++ PE + P +SDVY +G+VL EL+TG+ P
Sbjct: 186 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 103/231 (44%), Gaps = 41/231 (17%)
Query: 513 GTLLAEGKFGPVYRGFLPGGIHVAVKVL-VHGSTLTDQEAAR-ELEYLGRIKHPNLVPLT 570
G + G FG VY+G G VAVK+L V T +A + E+ L + +H N++
Sbjct: 18 GQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 75
Query: 571 GYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLL 630
GY Q + + E +L + LH + +
Sbjct: 76 GYS-TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI---------------------- 112
Query: 631 TTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKI---F 687
IA TA+ + +LH + IIHRD+K+++++L +L ++ DFGLA + +
Sbjct: 113 -------DIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRW 162
Query: 688 GNGLDEEIARGSPGYIPPEFAQPDSDFPTP-KSDVYCYGVVLLELITGKKP 737
E GS ++ PE + P +SDVY +G+VL EL+TG+ P
Sbjct: 163 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 103/231 (44%), Gaps = 41/231 (17%)
Query: 513 GTLLAEGKFGPVYRGFLPGGIHVAVKVL-VHGSTLTDQEAAR-ELEYLGRIKHPNLVPLT 570
G + G FG VY+G G VAVK+L V T +A + E+ L + +H N++
Sbjct: 13 GQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 70
Query: 571 GYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLL 630
GY Q + + E +L + LH + +
Sbjct: 71 GYS-TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI---------------------- 107
Query: 631 TTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKI---F 687
IA TA+ + +LH + IIHRD+K+++++L +L ++ DFGLA + +
Sbjct: 108 -------DIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRW 157
Query: 688 GNGLDEEIARGSPGYIPPEFAQPDSDFPTP-KSDVYCYGVVLLELITGKKP 737
E GS ++ PE + P +SDVY +G+VL EL+TG+ P
Sbjct: 158 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 108/237 (45%), Gaps = 44/237 (18%)
Query: 515 LLAEGKFGPVYRGFL--PGG--IHVAVKVLVHGSTLTDQ-EAARELEYLGRIKHPNLVPL 569
++ G+FG V G L PG I VA+K L G T + + E +G+ HPN++ L
Sbjct: 40 VIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHL 99
Query: 570 TGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGL 629
G + I ++MENG+L + L QN G +
Sbjct: 100 EGVVTKSTPVMIITEFMENGSLDSFLR-------------------------QNDGQFTV 134
Query: 630 LTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGN 689
+ IA G + LA +++ +HRD+ A ++ ++ NL ++SDFGL++ +
Sbjct: 135 IQLVGMLRGIAAGM-KYLADMNY------VHRDLAARNILVNSNLVCKVSDFGLSRFLED 187
Query: 690 GL-DEEIARGSPGYIPPEFAQPDS----DFPTPKSDVYCYGVVLLELIT-GKKPLGD 740
D G IP + P++ F T SDV+ YG+V+ E+++ G++P D
Sbjct: 188 DTSDPTYTSALGGKIPIRWTAPEAIQYRKF-TSASDVWSYGIVMWEVMSYGERPYWD 243
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 139/310 (44%), Gaps = 63/310 (20%)
Query: 513 GTLLAEGKFGPVYRGFLPGGIHVAVKVL-VHGSTLTDQEAAR-ELEYLGRIKHPNLVPLT 570
G + G FG VY+G G VAVK+L V T +A + E+ L + +H N++
Sbjct: 17 GQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 74
Query: 571 GYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLL 630
GY Q + + E +L + LH SE
Sbjct: 75 GYSTK-PQLAIVTQWCEGSSLYHHLH----------------------------ASET-- 103
Query: 631 TTWRFRHK----IALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKI 686
+F K IA TAR + +LH + IIHRD+K+++++L + ++ DFGLA +
Sbjct: 104 ---KFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATV 157
Query: 687 ---FGNGLDEEIARGSPGYIPPEFAQ-PDSDFPTPKSDVYCYGVVLLELITGKKPLGDDY 742
+ E GS ++ PE + DS+ + +SDVY +G+VL EL+TG+ P +
Sbjct: 158 KSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 217
Query: 743 PEEKEGNLVSWVRGLVRNNKGSRAID-PKIRDTGPEKQMEEALKIGYLCTADLPLKRPSM 801
++ +V +GS + D K+R P K+M+ + C +RPS
Sbjct: 218 NRDQIIEMV---------GRGSLSPDLSKVRSNCP-KRMKRLMA---ECLKKKRDERPSF 264
Query: 802 QQIVGLLKDI 811
+I+ ++++
Sbjct: 265 PRILAEIEEL 274
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 107/232 (46%), Gaps = 43/232 (18%)
Query: 513 GTLLAEGKFGPVYRGFLPGGIHVAVKVL-VHGSTLTDQEAAR-ELEYLGRIKHPNLVPLT 570
G + G FG VY+G G VAVK+L V T +A + E+ L + +H N++
Sbjct: 33 GQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 90
Query: 571 GYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLL 630
GY Q + + E +L + LH + +
Sbjct: 91 GYS-TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI---------------------- 127
Query: 631 TTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLA----KI 686
IA TA+ + +LH + IIHRD+K+++++L +L ++ DFGLA +
Sbjct: 128 -------DIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRW 177
Query: 687 FGNGLDEEIARGSPGYIPPEFAQPDSDFPTP-KSDVYCYGVVLLELITGKKP 737
G+ E+++ GS ++ PE + P +SDVY +G+VL EL+TG+ P
Sbjct: 178 SGSHQFEQLS-GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 228
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 107/232 (46%), Gaps = 43/232 (18%)
Query: 513 GTLLAEGKFGPVYRGFLPGGIHVAVKVL-VHGSTLTDQEAAR-ELEYLGRIKHPNLVPLT 570
G + G FG VY+G G VAVK+L V T +A + E+ L + +H N++
Sbjct: 41 GQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 98
Query: 571 GYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLL 630
GY Q + + E +L + LH + +
Sbjct: 99 GYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI---------------------- 135
Query: 631 TTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLA----KI 686
IA TA+ + +LH + IIHRD+K+++++L +L ++ DFGLA +
Sbjct: 136 -------DIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRW 185
Query: 687 FGNGLDEEIARGSPGYIPPEFAQPDSDFPTP-KSDVYCYGVVLLELITGKKP 737
G+ E+++ GS ++ PE + P +SDVY +G+VL EL+TG+ P
Sbjct: 186 SGSHQFEQLS-GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 107/232 (46%), Gaps = 43/232 (18%)
Query: 513 GTLLAEGKFGPVYRGFLPGGIHVAVKVL-VHGSTLTDQEAAR-ELEYLGRIKHPNLVPLT 570
G + G FG VY+G G VAVK+L V T +A + E+ L + +H N++
Sbjct: 13 GQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 70
Query: 571 GYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLL 630
GY Q + + E +L + LH + +
Sbjct: 71 GYS-TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI---------------------- 107
Query: 631 TTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLA----KI 686
IA TA+ + +LH + IIHRD+K+++++L +L ++ DFGLA +
Sbjct: 108 -------DIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRW 157
Query: 687 FGNGLDEEIARGSPGYIPPEFAQPDSDFPTP-KSDVYCYGVVLLELITGKKP 737
G+ E+++ GS ++ PE + P +SDVY +G+VL EL+TG+ P
Sbjct: 158 SGSHQFEQLS-GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 130/313 (41%), Gaps = 65/313 (20%)
Query: 515 LLAEGKFGPVYRGFLPGG----IHVAVKVLVHGSTLTDQEAARELEYLGRI----KHPNL 566
++ G FG VY G L IH AVK L + +TD + G I HPN+
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSL---NRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 567 VPLTGYCIAGD-QRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVG 625
+ L G C+ + + + YM++G+L+N + N N
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIR----------------------NETHNPT 131
Query: 626 SEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAK 685
+ L+ L A+ + FL S +HRD+ A + LD +++DFGLA+
Sbjct: 132 VKDLIG-------FGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 181
Query: 686 IFGNGLDEEIARGSPGYIPPEFAQPDS----DFPTPKSDVYCYGVVLLELITGKKPLGDD 741
+ + + + +P ++ +S F T KSDV+ +GV+L EL+T P
Sbjct: 182 DMYDKEFDSVHNKTGAKLPVKWMALESLQTQKF-TTKSDVWSFGVLLWELMTRGAP---P 237
Query: 742 YPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSM 801
YP+ ++ ++ +G R + P + P+ E LK C RPS
Sbjct: 238 YPDVNTFDITVYLL------QGRRLLQP---EYCPDPLYEVMLK----CWHPKAEMRPSF 284
Query: 802 QQIVGLLKDIEST 814
++V + I ST
Sbjct: 285 SELVSRISAIFST 297
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 130/313 (41%), Gaps = 65/313 (20%)
Query: 515 LLAEGKFGPVYRGFLPGG----IHVAVKVLVHGSTLTDQEAARELEYLGRI----KHPNL 566
++ G FG VY G L IH AVK L + +TD + G I HPN+
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSL---NRITDIGEVSQFLTEGIIMKDFSHPNV 91
Query: 567 VPLTGYCIAGD-QRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVG 625
+ L G C+ + + + YM++G+L+N + N N
Sbjct: 92 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIR----------------------NETHNPT 129
Query: 626 SEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAK 685
+ L+ L A+ + FL S +HRD+ A + LD +++DFGLA+
Sbjct: 130 VKDLI-------GFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 179
Query: 686 IFGNGLDEEIARGSPGYIPPEFAQPDS----DFPTPKSDVYCYGVVLLELITGKKPLGDD 741
+ + + + +P ++ +S F T KSDV+ +GV+L EL+T P
Sbjct: 180 DMYDKEFDSVHNKTGAKLPVKWMALESLQTQKF-TTKSDVWSFGVLLWELMTRGAP---P 235
Query: 742 YPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSM 801
YP+ ++ ++ +G R + P + P+ E LK C RPS
Sbjct: 236 YPDVNTFDITVYLL------QGRRLLQP---EYCPDPLYEVMLK----CWHPKAEMRPSF 282
Query: 802 QQIVGLLKDIEST 814
++V + I ST
Sbjct: 283 SELVSRISAIFST 295
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 112/236 (47%), Gaps = 51/236 (21%)
Query: 513 GTLLAEGKFGPVYRGFLPGGIHVAVKVL-VHGSTLTDQEAAR-ELEYLGRIKHPNLVPLT 570
G + G FG VY+G G VAVK+L V T +A + E+ L + +H N++
Sbjct: 29 GQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 86
Query: 571 GYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLL 630
GY Q + + E +L + LH SE
Sbjct: 87 GYSTK-PQLAIVTQWCEGSSLYHHLH----------------------------ASET-- 115
Query: 631 TTWRFRHK----IALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLA-- 684
+F K IA TAR + +LH + IIHRD+K+++++L + ++ DFGLA
Sbjct: 116 ---KFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATE 169
Query: 685 --KIFGNGLDEEIARGSPGYIPPEFAQ-PDSDFPTPKSDVYCYGVVLLELITGKKP 737
+ G+ E+++ GS ++ PE + DS+ + +SDVY +G+VL EL+TG+ P
Sbjct: 170 KSRWSGSHQFEQLS-GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 130/313 (41%), Gaps = 65/313 (20%)
Query: 515 LLAEGKFGPVYRGFLPGG----IHVAVKVLVHGSTLTDQEAARELEYLGRI----KHPNL 566
++ G FG VY G L IH AVK L + +TD + G I HPN+
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSL---NRITDIGEVSQFLTEGIIMKDFSHPNV 94
Query: 567 VPLTGYCIAGD-QRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVG 625
+ L G C+ + + + YM++G+L+N + N N
Sbjct: 95 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIR----------------------NETHNPT 132
Query: 626 SEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAK 685
+ L+ L A+ + FL S +HRD+ A + LD +++DFGLA+
Sbjct: 133 VKDLIG-------FGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 182
Query: 686 IFGNGLDEEIARGSPGYIPPEFAQPDS----DFPTPKSDVYCYGVVLLELITGKKPLGDD 741
+ + + + +P ++ +S F T KSDV+ +GV+L EL+T P
Sbjct: 183 DMYDKEFDSVHNKTGAKLPVKWMALESLQTQKF-TTKSDVWSFGVLLWELMTRGAP---P 238
Query: 742 YPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSM 801
YP+ ++ ++ +G R + P + P+ E LK C RPS
Sbjct: 239 YPDVNTFDITVYLL------QGRRLLQP---EYCPDPLYEVMLK----CWHPKAEMRPSF 285
Query: 802 QQIVGLLKDIEST 814
++V + I ST
Sbjct: 286 SELVSRISAIFST 298
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 130/313 (41%), Gaps = 65/313 (20%)
Query: 515 LLAEGKFGPVYRGFLPGG----IHVAVKVLVHGSTLTDQEAARELEYLGRI----KHPNL 566
++ G FG VY G L IH AVK L + +TD + G I HPN+
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSL---NRITDIGEVSQFLTEGIIMKDFSHPNV 94
Query: 567 VPLTGYCIAGD-QRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVG 625
+ L G C+ + + + YM++G+L+N + N N
Sbjct: 95 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIR----------------------NETHNPT 132
Query: 626 SEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAK 685
+ L+ L A+ + FL S +HRD+ A + LD +++DFGLA+
Sbjct: 133 VKDLIG-------FGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 182
Query: 686 IFGNGLDEEIARGSPGYIPPEFAQPDS----DFPTPKSDVYCYGVVLLELITGKKPLGDD 741
+ + + + +P ++ +S F T KSDV+ +GV+L EL+T P
Sbjct: 183 DMLDKEFDSVHNKTGAKLPVKWMALESLQTQKF-TTKSDVWSFGVLLWELMTRGAP---P 238
Query: 742 YPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSM 801
YP+ ++ ++ +G R + P + P+ E LK C RPS
Sbjct: 239 YPDVNTFDITVYLL------QGRRLLQP---EYCPDPLYEVMLK----CWHPKAEMRPSF 285
Query: 802 QQIVGLLKDIEST 814
++V + I ST
Sbjct: 286 SELVSRISAIFST 298
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 130/313 (41%), Gaps = 65/313 (20%)
Query: 515 LLAEGKFGPVYRGFLPGG----IHVAVKVLVHGSTLTDQEAARELEYLGRI----KHPNL 566
++ G FG VY G L IH AVK L + +TD + G I HPN+
Sbjct: 42 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSL---NRITDIGEVSQFLTEGIIMKDFSHPNV 98
Query: 567 VPLTGYCIAGD-QRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVG 625
+ L G C+ + + + YM++G+L+N + N N
Sbjct: 99 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIR----------------------NETHNPT 136
Query: 626 SEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAK 685
+ L+ L A+ + FL S +HRD+ A + LD +++DFGLA+
Sbjct: 137 VKDLIG-------FGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 186
Query: 686 IFGNGLDEEIARGSPGYIPPEFAQPDS----DFPTPKSDVYCYGVVLLELITGKKPLGDD 741
+ + + + +P ++ +S F T KSDV+ +GV+L EL+T P
Sbjct: 187 DMYDKEFDSVHNKTGAKLPVKWMALESLQTQKF-TTKSDVWSFGVLLWELMTRGAP---P 242
Query: 742 YPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSM 801
YP+ ++ ++ +G R + P + P+ E LK C RPS
Sbjct: 243 YPDVNTFDITVYLL------QGRRLLQP---EYCPDPLYEVMLK----CWHPKAEMRPSF 289
Query: 802 QQIVGLLKDIEST 814
++V + I ST
Sbjct: 290 SELVSRISAIFST 302
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 130/313 (41%), Gaps = 65/313 (20%)
Query: 515 LLAEGKFGPVYRGFLPGG----IHVAVKVLVHGSTLTDQEAARELEYLGRI----KHPNL 566
++ G FG VY G L IH AVK L + +TD + G I HPN+
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSL---NRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 567 VPLTGYCIAGD-QRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVG 625
+ L G C+ + + + YM++G+L+N + N N
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIR----------------------NETHNPT 131
Query: 626 SEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAK 685
+ L+ L A+ + FL S +HRD+ A + LD +++DFGLA+
Sbjct: 132 VKDLIG-------FGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 181
Query: 686 IFGNGLDEEIARGSPGYIPPEFAQPDS----DFPTPKSDVYCYGVVLLELITGKKPLGDD 741
+ + + + +P ++ +S F T KSDV+ +GV+L EL+T P
Sbjct: 182 DMYDKEFDSVHNKTGAKLPVKWMALESLQTQKF-TTKSDVWSFGVLLWELMTRGAP---P 237
Query: 742 YPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSM 801
YP+ ++ ++ +G R + P + P+ E LK C RPS
Sbjct: 238 YPDVNTFDITVYLL------QGRRLLQP---EYCPDPLYEVMLK----CWHPKAEMRPSF 284
Query: 802 QQIVGLLKDIEST 814
++V + I ST
Sbjct: 285 SELVSRISAIFST 297
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 131/315 (41%), Gaps = 40/315 (12%)
Query: 508 SNFDRGTLLAEGKFGPVYRGFLPG------GIHVAVKVLVHGSTLTDQEA-ARELEYLGR 560
+N G L G FG V G + VAVK+L + ++EA EL+ +
Sbjct: 31 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 90
Query: 561 I-KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXN 619
+ +H N+V L G C G + I +Y G+L N L +
Sbjct: 91 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKE 150
Query: 620 SIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLS 679
+ + LL F ++A G +AFL S IHRD+ A +V L ++
Sbjct: 151 DGRPLELRDLL---HFSSQVAQG----MAFL---ASKNCIHRDVAARNVLLTNGHVAKIG 200
Query: 680 DFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT-GK 735
DFGLA+ N I +G+ +P ++ P+S F T +SDV+ YG++L E+ + G
Sbjct: 201 DFGLARDIMND-SNYIVKGN-ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGL 258
Query: 736 KPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLP 795
P YP G++ N+K + + + P + I C A P
Sbjct: 259 NP----YP------------GILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEP 302
Query: 796 LKRPSMQQIVGLLKD 810
RP+ QQI L++
Sbjct: 303 THRPTFQQICSFLQE 317
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 130/313 (41%), Gaps = 65/313 (20%)
Query: 515 LLAEGKFGPVYRGFLPGG----IHVAVKVLVHGSTLTDQEAARELEYLGRI----KHPNL 566
++ G FG VY G L IH AVK L + +TD + G I HPN+
Sbjct: 96 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSL---NRITDIGEVSQFLTEGIIMKDFSHPNV 152
Query: 567 VPLTGYCIAGD-QRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVG 625
+ L G C+ + + + YM++G+L+N + N N
Sbjct: 153 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIR----------------------NETHNPT 190
Query: 626 SEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAK 685
+ L+ L A+ + FL S +HRD+ A + LD +++DFGLA+
Sbjct: 191 VKDLI-------GFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 240
Query: 686 IFGNGLDEEIARGSPGYIPPEFAQPDS----DFPTPKSDVYCYGVVLLELITGKKPLGDD 741
+ + + + +P ++ +S F T KSDV+ +GV+L EL+T P
Sbjct: 241 DMYDKEFDSVHNKTGAKLPVKWMALESLQTQKF-TTKSDVWSFGVLLWELMTRGAP---P 296
Query: 742 YPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSM 801
YP+ ++ ++ +G R + P + P+ E LK C RPS
Sbjct: 297 YPDVNTFDITVYLL------QGRRLLQP---EYCPDPLYEVMLK----CWHPKAEMRPSF 343
Query: 802 QQIVGLLKDIEST 814
++V + I ST
Sbjct: 344 SELVSRISAIFST 356
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 130/317 (41%), Gaps = 51/317 (16%)
Query: 516 LAEGKFGPVYRGFLPGGI------HVAVKVLVHGSTLTDQEA--ARELEYLGRIKHPNLV 567
+ EG FG V++ PG + VAVK+L ++ D +A RE + +PN+V
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS-ADMQADFQREAALMAEFDNPNIV 113
Query: 568 PLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSE 627
L G C G +++YM G+L L + + + G
Sbjct: 114 KLLGVCAVGKPMCLLFEYMAYGDLNEFLRSM----SPHTVCSLSHSDLSTRARVSSPGPP 169
Query: 628 GLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIF 687
L + IA A +A+L +HRD+ + + N+ +++DFGL++
Sbjct: 170 PLSCAEQL--CIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNI 224
Query: 688 GNGLDEEIARGSPGYIPPEFAQPDSDF---PTPKSDVYCYGVVLLELIT-GKKPLGDDYP 743
+ D A G+ IP + P+S F T +SDV+ YGVVL E+ + G +P
Sbjct: 225 YSA-DYYKADGNDA-IPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAH 282
Query: 744 EE-----KEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKR 798
EE ++GN+++ PE E + LC + LP R
Sbjct: 283 EEVIYYVRDGNILA----------------------CPENCPLELYNLMRLCWSKLPADR 320
Query: 799 PSMQQIVGLLKDIESTA 815
PS I +L+ + A
Sbjct: 321 PSFCSIHRILQRMCERA 337
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 107/237 (45%), Gaps = 44/237 (18%)
Query: 515 LLAEGKFGPVYRGFL--PGG--IHVAVKVLVHGSTLTDQ-EAARELEYLGRIKHPNLVPL 569
++ G+FG V G L PG I VA+K L G T + + E +G+ HPN++ L
Sbjct: 14 VIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHL 73
Query: 570 TGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGL 629
G + I ++MENG+L + L QN G +
Sbjct: 74 EGVVTKSTPVMIITEFMENGSLDSFLR-------------------------QNDGQFTV 108
Query: 630 LTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGN 689
+ IA G + LA +++ +HR + A ++ ++ NL ++SDFGL++ +
Sbjct: 109 IQLVGMLRGIAAGM-KYLADMNY------VHRALAARNILVNSNLVCKVSDFGLSRFLED 161
Query: 690 GL-DEEIARGSPGYIPPEFAQPDS----DFPTPKSDVYCYGVVLLELIT-GKKPLGD 740
D G IP + P++ F T SDV+ YG+V+ E+++ G++P D
Sbjct: 162 DTSDPTYTSALGGKIPIRWTAPEAIQYRKF-TSASDVWSYGIVMWEVMSYGERPYWD 217
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 128/312 (41%), Gaps = 62/312 (19%)
Query: 508 SNFDRGTLLAEGKFGPVYRGFLPGG-----IHVAVKVLVHGSTLTDQ-EAARELEYLGRI 561
S R ++ G+FG VY+G L + VA+K L G T + + E +G+
Sbjct: 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF 103
Query: 562 KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSI 621
H N++ L G + I +YMENG L L + + +
Sbjct: 104 SHHNIIRLEGVISKYKPMMIITEYMENGALDKFLRE----------------KDGEFSVL 147
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
Q VG + G A + +L + +HRD+ A ++ ++ NL ++SDF
Sbjct: 148 QLVG-------------MLRGIAAGMKYL---ANMNYVHRDLAARNILVNSNLVCKVSDF 191
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDS----DFPTPKSDVYCYGVVLLELIT-GKK 736
GL+++ + E S G IP + P++ F T SDV+ +G+V+ E++T G++
Sbjct: 192 GLSRVLEDD-PEATYTTSGGKIPIRWTAPEAISYRKF-TSASDVWSFGIVMWEVMTYGER 249
Query: 737 PLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPL 796
P + + N++ +AI+ R P ++ C
Sbjct: 250 PYWE-----------------LSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERA 292
Query: 797 KRPSMQQIVGLL 808
+RP IV +L
Sbjct: 293 RRPKFADIVSIL 304
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 130/315 (41%), Gaps = 53/315 (16%)
Query: 508 SNFDRGTLLAEGKFGPVYRGFLPG------GIHVAVKVLVHGSTLTDQEA-ARELEYLGR 560
+N G L G FG V G + VAVK+L + ++EA EL+ +
Sbjct: 38 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 97
Query: 561 I-KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXN 619
+ +H N+V L G C G + I +Y G+L N L
Sbjct: 98 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLR-------------RKAEADLDKE 144
Query: 620 SIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLS 679
+ + LL F ++A G +AFL S IHRD+ A +V L ++
Sbjct: 145 DGRPLELRDLL---HFSSQVAQG----MAFL---ASKNCIHRDVAARNVLLTNGHVAKIG 194
Query: 680 DFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT-GK 735
DFGLA+ N I +G+ +P ++ P+S F T +SDV+ YG++L E+ + G
Sbjct: 195 DFGLARDIMND-SNYIVKGN-ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGL 252
Query: 736 KPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLP 795
P YP G++ N+K + + + P + I C A P
Sbjct: 253 NP----YP------------GILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEP 296
Query: 796 LKRPSMQQIVGLLKD 810
RP+ QQI L++
Sbjct: 297 THRPTFQQICSFLQE 311
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 108/239 (45%), Gaps = 50/239 (20%)
Query: 515 LLAEGKFGPVYRGFL--PGG--IHVAVKVLVHGST-LTDQEAARELEYLGRIKHPNLVPL 569
++ G+FG V G L PG I VA+K L G T ++ E +G+ HPN++ L
Sbjct: 36 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHL 95
Query: 570 TGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGL 629
G + I +YMENG+L L IQ VG
Sbjct: 96 EGVVTKCKPVMIITEYMENGSLDAFLR----------------KNDGRFTVIQLVG---- 135
Query: 630 LTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGN 689
+ G + +L + +HRD+ A ++ ++ NL ++SDFG++++ +
Sbjct: 136 ---------MLRGIGSGMKYLSDMSA---VHRDLAARNILVNSNLVCKVSDFGMSRVLED 183
Query: 690 GLDEEIA---RGSPGYIPPEFAQPDS----DFPTPKSDVYCYGVVLLELIT-GKKPLGD 740
D E A RG G IP + P++ F T SDV+ YG+V+ E+++ G++P D
Sbjct: 184 --DPEAAYTTRG--GKIPIRWTAPEAIAYRKF-TSASDVWSYGIVMWEVMSYGERPYWD 237
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 129/313 (41%), Gaps = 65/313 (20%)
Query: 515 LLAEGKFGPVYRGFLPGG----IHVAVKVLVHGSTLTDQEAARELEYLGRI----KHPNL 566
++ G FG VY G L IH AVK L + +TD + G I HPN+
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSL---NRITDIGEVSQFLTEGIIMKDFSHPNV 92
Query: 567 VPLTGYCIAGD-QRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVG 625
+ L G C+ + + + YM++G+L+N + N N
Sbjct: 93 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIR----------------------NETHNPT 130
Query: 626 SEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAK 685
+ L+ L A+ + +L S +HRD+ A + LD +++DFGLA+
Sbjct: 131 VKDLIG-------FGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 180
Query: 686 IFGNGLDEEIARGSPGYIPPEFAQPDS----DFPTPKSDVYCYGVVLLELITGKKPLGDD 741
+ + + +P ++ +S F T KSDV+ +GV+L EL+T P
Sbjct: 181 DMYDKEXXSVHNKTGAKLPVKWMALESLQTQKF-TTKSDVWSFGVLLWELMTRGAP---P 236
Query: 742 YPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSM 801
YP+ ++ ++ +G R + P + P+ E LK C RPS
Sbjct: 237 YPDVNTFDITVYLL------QGRRLLQP---EYCPDPLYEVMLK----CWHPKAEMRPSF 283
Query: 802 QQIVGLLKDIEST 814
++V + I ST
Sbjct: 284 SELVSRISAIFST 296
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 123/301 (40%), Gaps = 59/301 (19%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIA 575
L G+FG V G G VA+K++ GS +++ E E + + + H LV L G C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 576 GDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWRF 635
I +YM NG L N L ++ Q ++ LL
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQ----------------------TQQLL----- 108
Query: 636 RHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEI 695
++ A+ +L S +HRD+ A + ++ ++SDFGL++ LD+E
Sbjct: 109 --EMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV---LDDEY 160
Query: 696 ARGSPGYIPPEFAQPD----SDFPTPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNL 750
P ++ P+ S F + KSD++ +GV++ E+ + GK P
Sbjct: 161 TSSRGSKFPVRWSPPEVLMYSKF-SSKSDIWAFGVLMWEIYSLGKMPYER---------- 209
Query: 751 VSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKD 810
N++ + I +R P E+ I Y C + +RP+ + ++ + D
Sbjct: 210 -------FTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILD 262
Query: 811 I 811
+
Sbjct: 263 V 263
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 107/239 (44%), Gaps = 50/239 (20%)
Query: 515 LLAEGKFGPVYRGFL--PGG--IHVAVKVLVHGST-LTDQEAARELEYLGRIKHPNLVPL 569
++ G+FG V G L PG I VA+K L G T ++ E +G+ HPN++ L
Sbjct: 15 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHL 74
Query: 570 TGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGL 629
G + I +YMENG+L L IQ VG
Sbjct: 75 EGVVTKCKPVMIITEYMENGSLDAFLR----------------KNDGRFTVIQLVG---- 114
Query: 630 LTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGN 689
+ G + +L +HRD+ A ++ ++ NL ++SDFG++++ +
Sbjct: 115 ---------MLRGIGSGMKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLED 162
Query: 690 GLDEEIA---RGSPGYIPPEFAQPDS----DFPTPKSDVYCYGVVLLELIT-GKKPLGD 740
D E A RG G IP + P++ F T SDV+ YG+V+ E+++ G++P D
Sbjct: 163 --DPEAAYTTRG--GKIPIRWTAPEAIAYRKF-TSASDVWSYGIVMWEVMSYGERPYWD 216
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 123/301 (40%), Gaps = 59/301 (19%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIA 575
L G+FG V G G VA+K++ GS +++ E E + + + H LV L G C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 576 GDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWRF 635
I +YM NG L N L ++ Q ++ LL
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQ----------------------TQQLL----- 108
Query: 636 RHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEI 695
++ A+ +L S +HRD+ A + ++ ++SDFGL++ LD+E
Sbjct: 109 --EMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV---LDDEY 160
Query: 696 ARGSPGYIPPEFAQPD----SDFPTPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNL 750
P ++ P+ S F + KSD++ +GV++ E+ + GK P
Sbjct: 161 TSSVGSKFPVRWSPPEVLMYSKF-SSKSDIWAFGVLMWEIYSLGKMPYER---------- 209
Query: 751 VSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKD 810
N++ + I +R P E+ I Y C + +RP+ + ++ + D
Sbjct: 210 -------FTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILD 262
Query: 811 I 811
+
Sbjct: 263 V 263
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 130/315 (41%), Gaps = 53/315 (16%)
Query: 508 SNFDRGTLLAEGKFGPVYRGFLPG------GIHVAVKVLVHGSTLTDQEA-ARELEYLGR 560
+N G L G FG V G + VAVK+L + ++EA EL+ +
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 561 I-KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXN 619
+ +H N+V L G C G + I +Y G+L N L
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLR-------------RKAEADLDKE 152
Query: 620 SIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLS 679
+ + LL F ++A G +AFL S IHRD+ A +V L ++
Sbjct: 153 DGRPLELRDLL---HFSSQVAQG----MAFL---ASKNCIHRDVAARNVLLTNGHVAKIG 202
Query: 680 DFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT-GK 735
DFGLA+ N I +G+ +P ++ P+S F T +SDV+ YG++L E+ + G
Sbjct: 203 DFGLARDIMND-SNYIVKGN-ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGL 260
Query: 736 KPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLP 795
P YP G++ N+K + + + P + I C A P
Sbjct: 261 NP----YP------------GILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEP 304
Query: 796 LKRPSMQQIVGLLKD 810
RP+ QQI L++
Sbjct: 305 THRPTFQQICSFLQE 319
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 107/239 (44%), Gaps = 50/239 (20%)
Query: 515 LLAEGKFGPVYRGFL--PGG--IHVAVKVLVHGST-LTDQEAARELEYLGRIKHPNLVPL 569
++ G+FG V G L PG I VA+K L G T ++ E +G+ HPN++ L
Sbjct: 21 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHL 80
Query: 570 TGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGL 629
G + I +YMENG+L L IQ VG
Sbjct: 81 EGVVTKCKPVMIITEYMENGSLDAFLR----------------KNDGRFTVIQLVG---- 120
Query: 630 LTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGN 689
+ G + +L +HRD+ A ++ ++ NL ++SDFG++++ +
Sbjct: 121 ---------MLRGIGSGMKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLED 168
Query: 690 GLDEEIA---RGSPGYIPPEFAQPDS----DFPTPKSDVYCYGVVLLELIT-GKKPLGD 740
D E A RG G IP + P++ F T SDV+ YG+V+ E+++ G++P D
Sbjct: 169 --DPEAAYTTRG--GKIPIRWTAPEAIAYRKF-TSASDVWSYGIVMWEVMSYGERPYWD 222
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 65.9 bits (159), Expect = 8e-11, Method: Composition-based stats.
Identities = 78/302 (25%), Positives = 133/302 (44%), Gaps = 59/302 (19%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIA 575
L G+FG V+ VAVK + GS + A E + ++H LV L +
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLA-EANVMKTLQHDKLVKLHA-VVT 80
Query: 576 GDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTW-R 634
+ I ++M G+L + L + GS+ L
Sbjct: 81 KEPIYIITEFMAKGSLLDFLK-------------------------SDEGSKQPLPKLID 115
Query: 635 FRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEE 694
F +IA G +AF+ IHRD++A+++ + +L +++DFGLA++ + +E
Sbjct: 116 FSAQIAEG----MAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIED--NEY 166
Query: 695 IARGSPGYIPPEFAQPDS-DFP--TPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNL 750
AR + P ++ P++ +F T KSDV+ +G++L+E++T G+ P YP
Sbjct: 167 TAREGAKF-PIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIP----YPG------ 215
Query: 751 VSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKD 810
+ N + RA++ R PE EE I C + P +RP+ + I +L D
Sbjct: 216 -------MSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 268
Query: 811 IE 812
E
Sbjct: 269 FE 270
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 105/237 (44%), Gaps = 44/237 (18%)
Query: 515 LLAEGKFGPVYRGFL--PGGIH--VAVKVLVHGSTLTDQ-EAARELEYLGRIKHPNLVPL 569
++ G+FG V RG L PG VA+K L G T + E E +G+ +HPN++ L
Sbjct: 21 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 80
Query: 570 TGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGL 629
G + + ++MENG L + L IQ VG
Sbjct: 81 EGVVTNSMPVMILTEFMENGALDSFLR----------------LNDGQFTVIQLVG---- 120
Query: 630 LTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIF-G 688
IA G R LA + + +HRD+ A ++ ++ NL ++SDFGL++
Sbjct: 121 -----MLRGIASGM-RYLAEMSY------VHRDLAARNILVNSNLVCKVSDFGLSRFLEE 168
Query: 689 NGLDEEIARGSPGYIPPEFAQPDS----DFPTPKSDVYCYGVVLLELIT-GKKPLGD 740
N D G IP + P++ F T SD + YG+V+ E+++ G++P D
Sbjct: 169 NSSDPTYTSSLGGKIPIRWTAPEAIAFRKF-TSASDAWSYGIVMWEVMSFGERPYWD 224
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 129/313 (41%), Gaps = 65/313 (20%)
Query: 515 LLAEGKFGPVYRGFLPGG----IHVAVKVLVHGSTLTDQEAARELEYLGRI----KHPNL 566
++ G FG VY G L IH AVK L + +TD + G I HPN+
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSL---NRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 567 VPLTGYCIAGD-QRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVG 625
+ L G C+ + + + YM++G+L+N + N N
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIR----------------------NETHNPT 131
Query: 626 SEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAK 685
+ L+ L A+ + +L S +HRD+ A + LD +++DFGLA+
Sbjct: 132 VKDLIG-------FGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 181
Query: 686 IFGNGLDEEIARGSPGYIPPEFAQPDS----DFPTPKSDVYCYGVVLLELITGKKPLGDD 741
+ + + +P ++ +S F T KSDV+ +GV+L EL+T P
Sbjct: 182 DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF-TTKSDVWSFGVLLWELMTRGAP---P 237
Query: 742 YPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSM 801
YP+ ++ ++ +G R + P + P+ E LK C RPS
Sbjct: 238 YPDVNTFDITVYLL------QGRRLLQP---EYCPDPLYEVMLK----CWHPKAEMRPSF 284
Query: 802 QQIVGLLKDIEST 814
++V + I ST
Sbjct: 285 SELVSRISAIFST 297
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 123/301 (40%), Gaps = 59/301 (19%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIA 575
L G+FG V G G VA+K++ GS +++ E E + + + H LV L G C
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 81
Query: 576 GDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWRF 635
I +YM NG L N L ++ Q ++ LL
Sbjct: 82 QRPIFIITEYMANGCLLNYLREMRHRFQ----------------------TQQLL----- 114
Query: 636 RHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEI 695
++ A+ +L S +HRD+ A + ++ ++SDFGL++ LD+E
Sbjct: 115 --EMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV---LDDEY 166
Query: 696 ARGSPGYIPPEFAQPD----SDFPTPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNL 750
P ++ P+ S F + KSD++ +GV++ E+ + GK P
Sbjct: 167 TSSVGSKFPVRWSPPEVLMYSKF-SSKSDIWAFGVLMWEIYSLGKMPYER---------- 215
Query: 751 VSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKD 810
N++ + I +R P E+ I Y C + +RP+ + ++ + D
Sbjct: 216 -------FTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILD 268
Query: 811 I 811
+
Sbjct: 269 V 269
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 129/313 (41%), Gaps = 65/313 (20%)
Query: 515 LLAEGKFGPVYRGFLPGG----IHVAVKVLVHGSTLTDQEAARELEYLGRI----KHPNL 566
++ G FG VY G L IH AVK L + +TD + G I HPN+
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSL---NRITDIGEVSQFLTEGIIMKDFSHPNV 92
Query: 567 VPLTGYCIAGD-QRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVG 625
+ L G C+ + + + YM++G+L+N + N N
Sbjct: 93 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIR----------------------NETHNPT 130
Query: 626 SEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAK 685
+ L+ L A+ + +L S +HRD+ A + LD +++DFGLA+
Sbjct: 131 VKDLIG-------FGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 180
Query: 686 IFGNGLDEEIARGSPGYIPPEFAQPDS----DFPTPKSDVYCYGVVLLELITGKKPLGDD 741
+ + + +P ++ +S F T KSDV+ +GV+L EL+T P
Sbjct: 181 DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF-TTKSDVWSFGVLLWELMTRGAP---P 236
Query: 742 YPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSM 801
YP+ ++ ++ +G R + P + P+ E LK C RPS
Sbjct: 237 YPDVNTFDITVYLL------QGRRLLQP---EYCPDPLYEVMLK----CWHPKAEMRPSF 283
Query: 802 QQIVGLLKDIEST 814
++V + I ST
Sbjct: 284 SELVSRISAIFST 296
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 129/313 (41%), Gaps = 65/313 (20%)
Query: 515 LLAEGKFGPVYRGFLPGG----IHVAVKVLVHGSTLTDQEAARELEYLGRI----KHPNL 566
++ G FG VY G L IH AVK L + +TD + G I HPN+
Sbjct: 56 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSL---NRITDIGEVSQFLTEGIIMKDFSHPNV 112
Query: 567 VPLTGYCIAGD-QRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVG 625
+ L G C+ + + + YM++G+L+N + N N
Sbjct: 113 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIR----------------------NETHNPT 150
Query: 626 SEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAK 685
+ L+ L A+ + +L S +HRD+ A + LD +++DFGLA+
Sbjct: 151 VKDLI-------GFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 200
Query: 686 IFGNGLDEEIARGSPGYIPPEFAQPDS----DFPTPKSDVYCYGVVLLELITGKKPLGDD 741
+ + + +P ++ +S F T KSDV+ +GV+L EL+T P
Sbjct: 201 DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF-TTKSDVWSFGVLLWELMTRGAP---P 256
Query: 742 YPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSM 801
YP+ ++ ++ +G R + P + P+ E LK C RPS
Sbjct: 257 YPDVNTFDITVYLL------QGRRLLQP---EYCPDPLYEVMLK----CWHPKAEMRPSF 303
Query: 802 QQIVGLLKDIEST 814
++V + I ST
Sbjct: 304 SELVSRISAIFST 316
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 129/313 (41%), Gaps = 65/313 (20%)
Query: 515 LLAEGKFGPVYRGFLPGG----IHVAVKVLVHGSTLTDQEAARELEYLGRI----KHPNL 566
++ G FG VY G L IH AVK L + +TD + G I HPN+
Sbjct: 55 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSL---NRITDIGEVSQFLTEGIIMKDFSHPNV 111
Query: 567 VPLTGYCIAGD-QRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVG 625
+ L G C+ + + + YM++G+L+N + N N
Sbjct: 112 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIR----------------------NETHNPT 149
Query: 626 SEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAK 685
+ L+ L A+ + +L S +HRD+ A + LD +++DFGLA+
Sbjct: 150 VKDLIG-------FGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 199
Query: 686 IFGNGLDEEIARGSPGYIPPEFAQPDS----DFPTPKSDVYCYGVVLLELITGKKPLGDD 741
+ + + +P ++ +S F T KSDV+ +GV+L EL+T P
Sbjct: 200 DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF-TTKSDVWSFGVLLWELMTRGAP---P 255
Query: 742 YPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSM 801
YP+ ++ ++ +G R + P + P+ E LK C RPS
Sbjct: 256 YPDVNTFDITVYLL------QGRRLLQP---EYCPDPLYEVMLK----CWHPKAEMRPSF 302
Query: 802 QQIVGLLKDIEST 814
++V + I ST
Sbjct: 303 SELVSRISAIFST 315
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 129/313 (41%), Gaps = 65/313 (20%)
Query: 515 LLAEGKFGPVYRGFLPGG----IHVAVKVLVHGSTLTDQEAARELEYLGRI----KHPNL 566
++ G FG VY G L IH AVK L + +TD + G I HPN+
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSL---NRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 567 VPLTGYCIAGD-QRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVG 625
+ L G C+ + + + YM++G+L+N + N N
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIR----------------------NETHNPT 131
Query: 626 SEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAK 685
+ L+ L A+ + +L S +HRD+ A + LD +++DFGLA+
Sbjct: 132 VKDLIG-------FGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 181
Query: 686 IFGNGLDEEIARGSPGYIPPEFAQPDS----DFPTPKSDVYCYGVVLLELITGKKPLGDD 741
+ + + +P ++ +S F T KSDV+ +GV+L EL+T P
Sbjct: 182 DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF-TTKSDVWSFGVLLWELMTRGAP---P 237
Query: 742 YPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSM 801
YP+ ++ ++ +G R + P + P+ E LK C RPS
Sbjct: 238 YPDVNTFDITVYLL------QGRRLLQP---EYCPDPLYEVMLK----CWHPKAEMRPSF 284
Query: 802 QQIVGLLKDIEST 814
++V + I ST
Sbjct: 285 SELVSRISAIFST 297
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 129/313 (41%), Gaps = 65/313 (20%)
Query: 515 LLAEGKFGPVYRGFLPGG----IHVAVKVLVHGSTLTDQEAARELEYLGRI----KHPNL 566
++ G FG VY G L IH AVK L + +TD + G I HPN+
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSL---NRITDIGEVSQFLTEGIIMKDFSHPNV 91
Query: 567 VPLTGYCIAGD-QRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVG 625
+ L G C+ + + + YM++G+L+N + N N
Sbjct: 92 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIR----------------------NETHNPT 129
Query: 626 SEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAK 685
+ L+ L A+ + +L S +HRD+ A + LD +++DFGLA+
Sbjct: 130 VKDLIG-------FGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 179
Query: 686 IFGNGLDEEIARGSPGYIPPEFAQPDS----DFPTPKSDVYCYGVVLLELITGKKPLGDD 741
+ + + +P ++ +S F T KSDV+ +GV+L EL+T P
Sbjct: 180 DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF-TTKSDVWSFGVLLWELMTRGAP---P 235
Query: 742 YPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSM 801
YP+ ++ ++ +G R + P + P+ E LK C RPS
Sbjct: 236 YPDVNTFDITVYLL------QGRRLLQP---EYCPDPLYEVMLK----CWHPKAEMRPSF 282
Query: 802 QQIVGLLKDIEST 814
++V + I ST
Sbjct: 283 SELVSRISAIFST 295
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 123/301 (40%), Gaps = 59/301 (19%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIA 575
L G+FG V G G VA+K++ GS +++ E E + + + H LV L G C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 576 GDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWRF 635
I +YM NG L N L ++ Q ++ LL
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQ----------------------TQQLL----- 123
Query: 636 RHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEI 695
++ A+ +L S +HRD+ A + ++ ++SDFGL++ LD+E
Sbjct: 124 --EMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV---LDDEY 175
Query: 696 ARGSPGYIPPEFAQPD----SDFPTPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNL 750
P ++ P+ S F + KSD++ +GV++ E+ + GK P
Sbjct: 176 TSSVGSKFPVRWSPPEVLMYSKF-SSKSDIWAFGVLMWEIYSLGKMPYER---------- 224
Query: 751 VSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKD 810
N++ + I +R P E+ I Y C + +RP+ + ++ + D
Sbjct: 225 -------FTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILD 277
Query: 811 I 811
+
Sbjct: 278 V 278
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 129/313 (41%), Gaps = 65/313 (20%)
Query: 515 LLAEGKFGPVYRGFLPGG----IHVAVKVLVHGSTLTDQEAARELEYLGRI----KHPNL 566
++ G FG VY G L IH AVK L + +TD + G I HPN+
Sbjct: 29 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSL---NRITDIGEVSQFLTEGIIMKDFSHPNV 85
Query: 567 VPLTGYCIAGD-QRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVG 625
+ L G C+ + + + YM++G+L+N + N N
Sbjct: 86 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIR----------------------NETHNPT 123
Query: 626 SEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAK 685
+ L+ L A+ + +L S +HRD+ A + LD +++DFGLA+
Sbjct: 124 VKDLIG-------FGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 173
Query: 686 IFGNGLDEEIARGSPGYIPPEFAQPDS----DFPTPKSDVYCYGVVLLELITGKKPLGDD 741
+ + + +P ++ +S F T KSDV+ +GV+L EL+T P
Sbjct: 174 DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF-TTKSDVWSFGVLLWELMTRGAP---P 229
Query: 742 YPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSM 801
YP+ ++ ++ +G R + P + P+ E LK C RPS
Sbjct: 230 YPDVNTFDITVYLL------QGRRLLQP---EYCPDPLYEVMLK----CWHPKAEMRPSF 276
Query: 802 QQIVGLLKDIEST 814
++V + I ST
Sbjct: 277 SELVSRISAIFST 289
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 129/313 (41%), Gaps = 65/313 (20%)
Query: 515 LLAEGKFGPVYRGFLPGG----IHVAVKVLVHGSTLTDQEAARELEYLGRI----KHPNL 566
++ G FG VY G L IH AVK L + +TD + G I HPN+
Sbjct: 32 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSL---NRITDIGEVSQFLTEGIIMKDFSHPNV 88
Query: 567 VPLTGYCIAGD-QRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVG 625
+ L G C+ + + + YM++G+L+N + N N
Sbjct: 89 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIR----------------------NETHNPT 126
Query: 626 SEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAK 685
+ L+ L A+ + +L S +HRD+ A + LD +++DFGLA+
Sbjct: 127 VKDLIG-------FGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 176
Query: 686 IFGNGLDEEIARGSPGYIPPEFAQPDS----DFPTPKSDVYCYGVVLLELITGKKPLGDD 741
+ + + +P ++ +S F T KSDV+ +GV+L EL+T P
Sbjct: 177 DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF-TTKSDVWSFGVLLWELMTRGAP---P 232
Query: 742 YPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSM 801
YP+ ++ ++ +G R + P + P+ E LK C RPS
Sbjct: 233 YPDVNTFDITVYLL------QGRRLLQP---EYCPDPLYEVMLK----CWHPKAEMRPSF 279
Query: 802 QQIVGLLKDIEST 814
++V + I ST
Sbjct: 280 SELVSRISAIFST 292
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 129/313 (41%), Gaps = 65/313 (20%)
Query: 515 LLAEGKFGPVYRGFLPGG----IHVAVKVLVHGSTLTDQEAARELEYLGRI----KHPNL 566
++ G FG VY G L IH AVK L + +TD + G I HPN+
Sbjct: 34 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSL---NRITDIGEVSQFLTEGIIMKDFSHPNV 90
Query: 567 VPLTGYCIAGD-QRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVG 625
+ L G C+ + + + YM++G+L+N + N N
Sbjct: 91 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIR----------------------NETHNPT 128
Query: 626 SEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAK 685
+ L+ L A+ + +L S +HRD+ A + LD +++DFGLA+
Sbjct: 129 VKDLIG-------FGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 178
Query: 686 IFGNGLDEEIARGSPGYIPPEFAQPDS----DFPTPKSDVYCYGVVLLELITGKKPLGDD 741
+ + + +P ++ +S F T KSDV+ +GV+L EL+T P
Sbjct: 179 DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF-TTKSDVWSFGVLLWELMTRGAP---P 234
Query: 742 YPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSM 801
YP+ ++ ++ +G R + P + P+ E LK C RPS
Sbjct: 235 YPDVNTFDITVYLL------QGRRLLQP---EYCPDPLYEVMLK----CWHPKAEMRPSF 281
Query: 802 QQIVGLLKDIEST 814
++V + I ST
Sbjct: 282 SELVSRISAIFST 294
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 130/300 (43%), Gaps = 59/300 (19%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIA 575
L +G FG V+ G G VA+K L G T++ + +E + + +++H LV L Y +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQL--YAVV 248
Query: 576 GDQRIAIY-DYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWR 634
++ I I +YM G+L + L G G
Sbjct: 249 SEEPIYIVTEYMSKGSLLDFLK----------------------------GETGKYLRLP 280
Query: 635 FRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEE 694
+A A +A++ +HRD++A+++ + NL +++DFGLA++ + +E
Sbjct: 281 QLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIED--NEY 335
Query: 695 IARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNL 750
AR + P ++ P++ T KSDV+ +G++L EL T G+ P YP
Sbjct: 336 TARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP----YP------- 383
Query: 751 VSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKD 810
G+V N + ++ R P + E + C P +RP+ + + L+D
Sbjct: 384 -----GMV-NREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 437
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 123/301 (40%), Gaps = 59/301 (19%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIA 575
L G+FG V G G VA+K++ GS +++ E E + + + H LV L G C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 576 GDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWRF 635
I +YM NG L N L ++ Q ++ LL
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQ----------------------TQQLL----- 123
Query: 636 RHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEI 695
++ A+ +L S +HRD+ A + ++ ++SDFGL++ LD+E
Sbjct: 124 --EMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV---LDDEE 175
Query: 696 ARGSPGYIPPEFAQPD----SDFPTPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNL 750
P ++ P+ S F + KSD++ +GV++ E+ + GK P
Sbjct: 176 TSSVGSKFPVRWSPPEVLMYSKF-SSKSDIWAFGVLMWEIYSLGKMPYER---------- 224
Query: 751 VSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKD 810
N++ + I +R P E+ I Y C + +RP+ + ++ + D
Sbjct: 225 -------FTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILD 277
Query: 811 I 811
+
Sbjct: 278 V 278
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 130/300 (43%), Gaps = 59/300 (19%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIA 575
L +G FG V+ G G VA+K L G T++ + +E + + +++H LV L Y +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQL--YAVV 248
Query: 576 GDQRIAIY-DYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWR 634
++ I I +YM G+L + L G G
Sbjct: 249 SEEPIYIVTEYMSKGSLLDFLK----------------------------GETGKYLRLP 280
Query: 635 FRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEE 694
+A A +A++ +HRD++A+++ + NL +++DFGLA++ + +E
Sbjct: 281 QLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIED--NEY 335
Query: 695 IARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNL 750
AR + P ++ P++ T KSDV+ +G++L EL T G+ P YP
Sbjct: 336 TARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP----YP------- 383
Query: 751 VSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKD 810
G+V N + ++ R P + E + C P +RP+ + + L+D
Sbjct: 384 -----GMV-NREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 437
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 130/300 (43%), Gaps = 59/300 (19%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIA 575
L +G FG V+ G G VA+K L G T++ + +E + + +++H LV L Y +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQL--YAVV 248
Query: 576 GDQRIAIY-DYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWR 634
++ I I +YM G+L + L G G
Sbjct: 249 SEEPIYIVGEYMSKGSLLDFLK----------------------------GETGKYLRLP 280
Query: 635 FRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEE 694
+A A +A++ +HRD++A+++ + NL +++DFGLA++ + +E
Sbjct: 281 QLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIED--NEY 335
Query: 695 IARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNL 750
AR + P ++ P++ T KSDV+ +G++L EL T G+ P YP
Sbjct: 336 TARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP----YP------- 383
Query: 751 VSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKD 810
G+V N + ++ R P + E + C P +RP+ + + L+D
Sbjct: 384 -----GMV-NREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 437
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 105/237 (44%), Gaps = 44/237 (18%)
Query: 515 LLAEGKFGPVYRGFL--PGGIH--VAVKVLVHGSTLTDQ-EAARELEYLGRIKHPNLVPL 569
++ G+FG V RG L PG VA+K L G T + E E +G+ +HPN++ L
Sbjct: 23 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 82
Query: 570 TGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGL 629
G + + ++MENG L + L IQ VG
Sbjct: 83 EGVVTNSMPVMILTEFMENGALDSFLR----------------LNDGQFTVIQLVG---- 122
Query: 630 LTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIF-G 688
IA G R LA + + +HRD+ A ++ ++ NL ++SDFGL++
Sbjct: 123 -----MLRGIASGM-RYLAEMSY------VHRDLAARNILVNSNLVCKVSDFGLSRFLEE 170
Query: 689 NGLDEEIARGSPGYIPPEFAQPDS----DFPTPKSDVYCYGVVLLELIT-GKKPLGD 740
N D G IP + P++ F T SD + YG+V+ E+++ G++P D
Sbjct: 171 NSSDPTETSSLGGKIPIRWTAPEAIAFRKF-TSASDAWSYGIVMWEVMSFGERPYWD 226
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 105/237 (44%), Gaps = 42/237 (17%)
Query: 516 LAEGKFGPVYRG----FLP--GGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPL 569
L EG FG V+ P I VAVK L S ++ RE E L ++H ++V
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 570 TGYCIAGDQRIAIYDYMENGNLQNLLH----DLPLGVQXXXXXXXXXXXXXXXNSIQNVG 625
G C+ GD I +++YM++G+L L D L + N
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEG------------------NPP 122
Query: 626 SEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAK 685
+E LT + H IA A + +L S +HRD+ + + NL ++ DFG+++
Sbjct: 123 TE--LTQSQMLH-IAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSR 176
Query: 686 IFGNGLDEEIAR-GSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT-GKKP 737
+ + R G +P + P+S T +SDV+ GVVL E+ T GK+P
Sbjct: 177 ---DVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP 230
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 99/237 (41%), Gaps = 39/237 (16%)
Query: 509 NFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVL---VHGSTLTDQEAARELEYLGRIKHP 564
N+ L EG FG V + G VA+K++ V + RE+ YL ++HP
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 73
Query: 565 NLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNV 624
+++ L + D+ I + +Y N ++ + Q
Sbjct: 74 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ--------------------- 112
Query: 625 GSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLA 684
RF +I A+ + H I+HRD+K ++ LD +L +++DFGL+
Sbjct: 113 ------EARRFFQQII----SAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLS 159
Query: 685 KIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDD 741
I +G + + GSP Y PE + P+ DV+ GV+L ++ + P D+
Sbjct: 160 NIMTDGNFLKTSCGSPNYAAPEVIS-GKLYAGPEVDVWSCGVILYVMLCRRLPFDDE 215
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 99/237 (41%), Gaps = 39/237 (16%)
Query: 509 NFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVL---VHGSTLTDQEAARELEYLGRIKHP 564
N+ L EG FG V + G VA+K++ V + RE+ YL ++HP
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 74
Query: 565 NLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNV 624
+++ L + D+ I + +Y N ++ + Q
Sbjct: 75 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ--------------------- 113
Query: 625 GSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLA 684
RF +I A+ + H I+HRD+K ++ LD +L +++DFGL+
Sbjct: 114 ------EARRFFQQII----SAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLS 160
Query: 685 KIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDD 741
I +G + + GSP Y PE + P+ DV+ GV+L ++ + P D+
Sbjct: 161 NIMTDGNFLKTSCGSPNYAAPEVIS-GKLYAGPEVDVWSCGVILYVMLCRRLPFDDE 216
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 103/235 (43%), Gaps = 34/235 (14%)
Query: 513 GTLLAEGKFGPVYRGFLPG--------GIHVAVKVLVHGSTLTD-QEAARELEYLGRI-K 562
G L EG FG V G + VAVK+L +T D + E+E + I K
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 563 HPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLH-DLPLGVQXXXXXXXXXXXXXXXNSI 621
H N++ L G C I +Y GNL+ L P G++ I
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY-------------DI 146
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
V E + T++ AR + +L S IHRD+ A +V + N R++DF
Sbjct: 147 NRVPEEQM--TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADF 201
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT 733
GLA+ N + + + G +P ++ P++ F T +SDV+ +GV++ E+ T
Sbjct: 202 GLARDINNI--DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 109/237 (45%), Gaps = 52/237 (21%)
Query: 515 LLAEGKFGPVYRGFL--PGG--IHVAVKVLVHGSTLTDQ-EAARELEYLGRIKHPNLVPL 569
++ G+FG V G L PG + VA+K L G T + + E +G+ HPN++ L
Sbjct: 29 VIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHL 88
Query: 570 TGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGL 629
G + + +YMENG+L L ++G
Sbjct: 89 EGVVTKSKPVMIVTEYMENGSLDTFLKK----------------------------NDGQ 120
Query: 630 LTTWRFRHKIALGTARAL-AFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFG 688
T + +G R + A + + +HRD+ A ++ ++ NL ++SDFGL+++
Sbjct: 121 FTVIQL-----VGMLRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE 175
Query: 689 NGLDEEIA---RGSPGYIPPEFAQPDS----DFPTPKSDVYCYGVVLLELIT-GKKP 737
+ D E A RG G IP + P++ F T SDV+ YG+V+ E+++ G++P
Sbjct: 176 D--DPEAAYTTRG--GKIPIRWTAPEAIAFRKF-TSASDVWSYGIVMWEVVSYGERP 227
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 108/240 (45%), Gaps = 45/240 (18%)
Query: 508 SNFDRGTLLAEGKFGPVYRG-FLPGG----IHVAVKVLVHGST-LTDQEAARELEYLGRI 561
+ F + +L+ G FG VY+G ++P G I VA+K L ++ ++E E + +
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 562 KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSI 621
+P++ L G C+ +Q ++ +P G
Sbjct: 82 DNPHVCRLLGICL-------------TSTVQLIMQLMPFGC----------LLDYVREHK 118
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
N+GS+ LL W + A+ + +L ++HRD+ A +V + +++DF
Sbjct: 119 DNIGSQYLLN-W------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDF 168
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT-GKKP 737
GLAK+ G E A G G +P ++ +S T +SDV+ YGV + EL+T G KP
Sbjct: 169 GLAKLLGAEEKEYHAEG--GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 104/235 (44%), Gaps = 34/235 (14%)
Query: 513 GTLLAEGKFGPVYRGFLPG--------GIHVAVKVLVHGSTLTD-QEAARELEYLGRI-K 562
G L EG FG V G + VAVK+L +T D + E+E + I K
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 563 HPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLH-DLPLGVQXXXXXXXXXXXXXXXNSI 621
H N++ L G C I +Y GNL+ L P G++ I
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSY-------------DI 146
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
V E + T++ AR + +L S IHRD+ A +V + N +++DF
Sbjct: 147 NRVPEEQM--TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADF 201
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT 733
GLA+ N + + + G +P ++ P++ F T +SDV+ +GV++ E+ T
Sbjct: 202 GLARDINNI--DXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 135/300 (45%), Gaps = 58/300 (19%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIA 575
L G+FG V+ G+ VAVK L G T++ Q E + ++H LV L
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPG-TMSVQAFLEEANLMKTLQHDKLVRLYAVVTR 79
Query: 576 GDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTW-R 634
+ I +YM G+L + L + G + LL
Sbjct: 80 EEPIYIITEYMAKGSLLDFLK-------------------------SDEGGKVLLPKLID 114
Query: 635 FRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEE 694
F +IA G +A++ IHRD++A++V + +L +++DFGLA++ + +E
Sbjct: 115 FSAQIAEG----MAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIED--NEY 165
Query: 695 IARGSPGYIPPEFAQPDS-DFP--TPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNL 750
AR + P ++ P++ +F T KSDV+ +G++L E++T GK P YP ++
Sbjct: 166 TAREGAKF-PIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIP----YPGRTNADV 220
Query: 751 VSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKD 810
++ + ++G R P++ + +E I +C + +RP+ + +L D
Sbjct: 221 MTAL------SQGYRM--PRVENCP-----DELYDIMKMCWKEKAEERPTFDYLQSVLDD 267
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 99/237 (41%), Gaps = 39/237 (16%)
Query: 509 NFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVL---VHGSTLTDQEAARELEYLGRIKHP 564
N+ L EG FG V + G VA+K++ V + RE+ YL ++HP
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 64
Query: 565 NLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNV 624
+++ L + D+ I + +Y N ++ + Q
Sbjct: 65 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ--------------------- 103
Query: 625 GSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLA 684
RF +I A+ + H I+HRD+K ++ LD +L +++DFGL+
Sbjct: 104 ------EARRFFQQII----SAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLS 150
Query: 685 KIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDD 741
I +G + + GSP Y PE + P+ DV+ GV+L ++ + P D+
Sbjct: 151 NIMTDGNFLKTSCGSPNYAAPEVIS-GKLYAGPEVDVWSCGVILYVMLCRRLPFDDE 206
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 103/235 (43%), Gaps = 34/235 (14%)
Query: 513 GTLLAEGKFGPVYRGFLPG--------GIHVAVKVLVHGSTLTD-QEAARELEYLGRI-K 562
G L EG FG V G + VAVK+L +T D + E+E + I K
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 563 HPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLH-DLPLGVQXXXXXXXXXXXXXXXNSI 621
H N++ L G C I +Y GNL+ L P G++ I
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY-------------DI 146
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
V E + T++ AR + +L S IHRD+ A +V + N +++DF
Sbjct: 147 NRVPEEQM--TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADF 201
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT 733
GLA+ N + + + G +P ++ P++ F T +SDV+ +GV++ E+ T
Sbjct: 202 GLARDINNI--DXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 130/300 (43%), Gaps = 59/300 (19%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIA 575
L +G FG V+ G G VA+K L G T++ + +E + + +++H LV L Y +
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQL--YAVV 72
Query: 576 GDQRIAIY-DYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWR 634
++ I I +YM G+L + L G G
Sbjct: 73 SEEPIXIVTEYMSKGSLLDFLK----------------------------GETGKYLRLP 104
Query: 635 FRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEE 694
+A A +A++ +HRD++A+++ + NL +++DFGLA++ + +E
Sbjct: 105 QLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIED--NEX 159
Query: 695 IARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNL 750
AR + P ++ P++ T KSDV+ +G++L EL T G+ P YP
Sbjct: 160 TARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP----YP------- 207
Query: 751 VSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKD 810
G+V N + ++ R P + E + C P +RP+ + + L+D
Sbjct: 208 -----GMV-NREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 261
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 105/227 (46%), Gaps = 42/227 (18%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIA 575
L G+FG V+ G G VA+K L G T++ + E + + ++KH LV L Y +
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPG-TMSPESFLEEAQIMKKLKHDKLVQL--YAVV 73
Query: 576 GDQRIAIY-DYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWR 634
++ I I +YM G+L + L D EG
Sbjct: 74 SEEPIYIVTEYMNKGSLLDFLKD----------------------------GEGRALKLP 105
Query: 635 FRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEE 694
+A A +A++ IHRD++++++ + L +++DFGLA++ + +E
Sbjct: 106 NLVDMAAQVAAGMAYIERMN---YIHRDLRSANILVGNGLICKIADFGLARLIED--NEX 160
Query: 695 IARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT-GKKP 737
AR + P ++ P++ T KSDV+ +G++L EL+T G+ P
Sbjct: 161 TARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVP 206
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 99/237 (41%), Gaps = 39/237 (16%)
Query: 509 NFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVL---VHGSTLTDQEAARELEYLGRIKHP 564
N+ L EG FG V + G VA+K++ V + RE+ YL ++HP
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 68
Query: 565 NLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNV 624
+++ L + D+ I + +Y N ++ + Q
Sbjct: 69 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ--------------------- 107
Query: 625 GSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLA 684
RF +I A+ + H I+HRD+K ++ LD +L +++DFGL+
Sbjct: 108 ------EARRFFQQII----SAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLS 154
Query: 685 KIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDD 741
I +G + + GSP Y PE + P+ DV+ GV+L ++ + P D+
Sbjct: 155 NIMTDGNFLKTSCGSPNYAAPEVIS-GKLYAGPEVDVWSCGVILYVMLCRRLPFDDE 210
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 132/301 (43%), Gaps = 59/301 (19%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIA 575
L G+FG V+ VAVK + GS + A E + ++H LV L +
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLA-EANVMKTLQHDKLVKLHA-VVT 253
Query: 576 GDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTW-R 634
+ I ++M G+L + L + GS+ L
Sbjct: 254 KEPIYIITEFMAKGSLLDFLK-------------------------SDEGSKQPLPKLID 288
Query: 635 FRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEE 694
F +IA G +AF+ IHRD++A+++ + +L +++DFGLA++ + +E
Sbjct: 289 FSAQIAEG----MAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIED--NEY 339
Query: 695 IARGSPGYIPPEFAQPDS-DFP--TPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNL 750
AR + P ++ P++ +F T KSDV+ +G++L+E++T G+ P YP
Sbjct: 340 TAREGAKF-PIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIP----YPG------ 388
Query: 751 VSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKD 810
+ N + RA++ R PE EE I C + P +RP+ + I +L D
Sbjct: 389 -------MSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 441
Query: 811 I 811
Sbjct: 442 F 442
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 107/240 (44%), Gaps = 45/240 (18%)
Query: 508 SNFDRGTLLAEGKFGPVYRG-FLPGG----IHVAVKVLVHGST-LTDQEAARELEYLGRI 561
+ F + +L G FG VY+G ++P G I VA+K L ++ ++E E + +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 562 KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSI 621
+P++ L G C+ +Q ++ +P G
Sbjct: 78 DNPHVCRLLGICL-------------TSTVQLIMQLMPFGC----------LLDYVREHK 114
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
N+GS+ LL W + A+ + +L ++HRD+ A +V + +++DF
Sbjct: 115 DNIGSQYLLN-W------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDF 164
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT-GKKP 737
GLAK+ G E A G G +P ++ +S T +SDV+ YGV + EL+T G KP
Sbjct: 165 GLAKLLGAEEKEYHAEG--GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 107/240 (44%), Gaps = 45/240 (18%)
Query: 508 SNFDRGTLLAEGKFGPVYRG-FLPGG----IHVAVKVLVHGST-LTDQEAARELEYLGRI 561
+ F + +L G FG VY+G ++P G I VA+K L ++ ++E E + +
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 562 KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSI 621
+P++ L G C+ +Q ++ +P G
Sbjct: 76 DNPHVCRLLGICL-------------TSTVQLIMQLMPFGC----------LLDYVREHK 112
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
N+GS+ LL W + A+ + +L ++HRD+ A +V + +++DF
Sbjct: 113 DNIGSQYLLN-W------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDF 162
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT-GKKP 737
GLAK+ G E A G G +P ++ +S T +SDV+ YGV + EL+T G KP
Sbjct: 163 GLAKLLGAEEKEYHAEG--GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 220
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 107/240 (44%), Gaps = 45/240 (18%)
Query: 508 SNFDRGTLLAEGKFGPVYRG-FLPGG----IHVAVKVLVHGST-LTDQEAARELEYLGRI 561
+ F + +L G FG VY+G ++P G I VA+K L ++ ++E E + +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 562 KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSI 621
+P++ L G C+ +Q ++ +P G
Sbjct: 75 DNPHVCRLLGICL-------------TSTVQLIMQLMPFGC----------LLDYVREHK 111
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
N+GS+ LL W + A+ + +L ++HRD+ A +V + +++DF
Sbjct: 112 DNIGSQYLLN-W------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDF 161
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT-GKKP 737
GLAK+ G E A G G +P ++ +S T +SDV+ YGV + EL+T G KP
Sbjct: 162 GLAKLLGAEEKEYHAEG--GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 107/240 (44%), Gaps = 45/240 (18%)
Query: 508 SNFDRGTLLAEGKFGPVYRG-FLPGG----IHVAVKVLVHGST-LTDQEAARELEYLGRI 561
+ F + +L G FG VY+G ++P G I VA+K L ++ ++E E + +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 562 KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSI 621
+P++ L G C+ +Q ++ +P G
Sbjct: 77 DNPHVCRLLGICL-------------TSTVQLIMQLMPFGC----------LLDYVREHK 113
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
N+GS+ LL W + A+ + +L ++HRD+ A +V + +++DF
Sbjct: 114 DNIGSQYLLN-W------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDF 163
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT-GKKP 737
GLAK+ G E A G G +P ++ +S T +SDV+ YGV + EL+T G KP
Sbjct: 164 GLAKLLGAEEKEYHAEG--GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 106/240 (44%), Gaps = 45/240 (18%)
Query: 508 SNFDRGTLLAEGKFGPVYRG-FLPGG----IHVAVKVLVHG-STLTDQEAARELEYLGRI 561
+ F + +L G FG VY+G ++P G I VA+K L S ++E E + +
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 562 KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSI 621
+P++ L G C+ +Q ++ +P G
Sbjct: 79 DNPHVCRLLGICL-------------TSTVQLIMQLMPFGC----------LLDYVREHK 115
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
N+GS+ LL W + A+ + +L ++HRD+ A +V + +++DF
Sbjct: 116 DNIGSQYLLN-W------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDF 165
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT-GKKP 737
GLAK+ G E A G G +P ++ +S T +SDV+ YGV + EL+T G KP
Sbjct: 166 GLAKLLGAEEKEYHAEG--GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 223
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 104/234 (44%), Gaps = 46/234 (19%)
Query: 515 LLAEGKFGPVYRGFL--PG--GIHVAVKVLVHGST-LTDQEAARELEYLGRIKHPNLVPL 569
++ G G V G L PG + VA+K L G T ++ E +G+ HPN++ L
Sbjct: 56 IIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRL 115
Query: 570 TGYCIAGDQRIAIYDYMENGNLQNLL--HDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSE 627
G G + + +YMENG+L L HD + +Q VG
Sbjct: 116 EGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTI------------------MQLVG-- 155
Query: 628 GLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIF 687
+ G + +L +HRD+ A +V +D NL ++SDFGL+++
Sbjct: 156 -----------MLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVL 201
Query: 688 GNGLDEEIARGSPGYIPPEFAQPDS-DFPT--PKSDVYCYGVVLLELIT-GKKP 737
+ D + G IP + P++ F T SDV+ +GVV+ E++ G++P
Sbjct: 202 EDDPDAAYT-TTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 103/235 (43%), Gaps = 34/235 (14%)
Query: 513 GTLLAEGKFGPVYRGFLPG--------GIHVAVKVLVHGSTLTD-QEAARELEYLGRI-K 562
G L EG FG V G + VAVK+L +T D + E+E + I K
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 563 HPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLH-DLPLGVQXXXXXXXXXXXXXXXNSI 621
H N++ L G C I +Y GNL+ L P G++ I
Sbjct: 100 HKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY-------------DI 146
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
V E + T++ AR + +L S IHRD+ A +V + N +++DF
Sbjct: 147 NRVPEEQM--TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADF 201
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT 733
GLA+ N + + + G +P ++ P++ F T +SDV+ +GV++ E+ T
Sbjct: 202 GLARDINNI--DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 130/300 (43%), Gaps = 59/300 (19%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIA 575
L +G FG V+ G G VA+K L G T++ + +E + + +++H LV L Y +
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQL--YAVV 331
Query: 576 GDQRIAIY-DYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWR 634
++ I I +YM G+L + L G G
Sbjct: 332 SEEPIYIVTEYMSKGSLLDFLK----------------------------GETGKYLRLP 363
Query: 635 FRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEE 694
+A A +A++ +HRD++A+++ + NL +++DFGLA++ + +E
Sbjct: 364 QLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIED--NEY 418
Query: 695 IARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNL 750
AR + P ++ P++ T KSDV+ +G++L EL T G+ P YP
Sbjct: 419 TARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP----YP------- 466
Query: 751 VSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKD 810
G+V N + ++ R P + E + C P +RP+ + + L+D
Sbjct: 467 -----GMV-NREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 520
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 104/234 (44%), Gaps = 46/234 (19%)
Query: 515 LLAEGKFGPVYRGFL--PG--GIHVAVKVLVHGST-LTDQEAARELEYLGRIKHPNLVPL 569
++ G G V G L PG + VA+K L G T ++ E +G+ HPN++ L
Sbjct: 56 IIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRL 115
Query: 570 TGYCIAGDQRIAIYDYMENGNLQNLL--HDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSE 627
G G + + +YMENG+L L HD + +Q VG
Sbjct: 116 EGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTI------------------MQLVG-- 155
Query: 628 GLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIF 687
+ G + +L +HRD+ A +V +D NL ++SDFGL+++
Sbjct: 156 -----------MLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVL 201
Query: 688 GNGLDEEIARGSPGYIPPEFAQPDS-DFPT--PKSDVYCYGVVLLELIT-GKKP 737
+ D + G IP + P++ F T SDV+ +GVV+ E++ G++P
Sbjct: 202 EDDPDAAXT-TTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 100/239 (41%), Gaps = 41/239 (17%)
Query: 509 NFDRGTLLAEGKFGPVYRG-FLPGGIHVAVKVLVHGSTLTD---QEAARELEYLGRIKHP 564
+F G LL +G F VYR + G+ VA+K++ + Q E++ ++KHP
Sbjct: 12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHP 71
Query: 565 NLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNV 624
+++ L Y + + + NG + L N ++
Sbjct: 72 SILELYNYFEDSNYVYLVLEMCHNGEMNRYL----------------------KNRVKPF 109
Query: 625 GSEGLLTTWRFRHKIALGTARALAFLH-HGCSPPIIHRDIKASSVYLDMNLEPRLSDFGL 683
F H+I G + +LH HG I+HRD+ S++ L N+ +++DFGL
Sbjct: 110 SEN---EARHFMHQIITG----MLYLHSHG----ILHRDLTLSNLLLTRNMNIKIADFGL 158
Query: 684 AKIFGNGLDEEIAR-GSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDD 741
A ++ G+P YI PE A + +SDV+ G + L+ G+ P D
Sbjct: 159 ATQLKMPHEKHYTLCGTPNYISPEIATRSAH--GLESDVWSLGCMFYTLLIGRPPFDTD 215
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 122/313 (38%), Gaps = 40/313 (12%)
Query: 508 SNFDRGTLLAEGKFGPVYRGFLPG------GIHVAVKVLVHGSTLTDQEA-ARELEYLGR 560
N + G +L G FG V G I VAVK+L + +++EA EL+ + +
Sbjct: 45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 104
Query: 561 I-KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXN 619
+ H N+V L G C I++Y G+L N L
Sbjct: 105 LGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEE 164
Query: 620 SIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLS 679
+ + E LL A A+ + FL +HRD+ A +V + ++
Sbjct: 165 DLNVLTFEDLLC-------FAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKIC 214
Query: 680 DFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT-GK 735
DFGLA+ + + RG+ +P ++ P+S F T KSDV+ YG++L E+ + G
Sbjct: 215 DFGLARDIMSD-SNYVVRGNAR-LPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGV 272
Query: 736 KPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLP 795
P YP G+ + + I + P EE I C A
Sbjct: 273 NP----YP------------GIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDS 316
Query: 796 LKRPSMQQIVGLL 808
KRPS + L
Sbjct: 317 RKRPSFPNLTSFL 329
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 121/294 (41%), Gaps = 57/294 (19%)
Query: 516 LAEGKFGPVYRGFLPG-GIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCI 574
L G+FG VY G + VAVK L T+ +E +E + IKHPNLV L G C
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 575 AGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWR 634
I ++M GNL + L + + Q V + LL
Sbjct: 78 REPPFYIITEFMTYGNLLDYLREC---------------------NRQEVSAVVLLY--- 113
Query: 635 FRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEE 694
+A + A+ +L IHRD+ A + + N +++DFGL+++ D
Sbjct: 114 ----MATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG--DTX 164
Query: 695 IARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNL 750
A + P ++ P+S + + KSDV+ +GV+L E+ T G P YP G
Sbjct: 165 TAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP----YP----GID 215
Query: 751 VSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQI 804
S V L+ + R PE E+ ++ C P RPS +I
Sbjct: 216 PSQVYELLEKD---------YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 107/240 (44%), Gaps = 45/240 (18%)
Query: 508 SNFDRGTLLAEGKFGPVYRG-FLPGG----IHVAVKVLVHGST-LTDQEAARELEYLGRI 561
+ F + +L G FG VY+G ++P G I VA+K L ++ ++E E + +
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 562 KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSI 621
+P++ L G C+ +Q ++ +P G
Sbjct: 76 DNPHVCRLLGICL-------------TSTVQLIMQLMPFGX----------LLDYVREHK 112
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
N+GS+ LL W + A+ + +L ++HRD+ A +V + +++DF
Sbjct: 113 DNIGSQYLLN-W------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDF 162
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT-GKKP 737
GLAK+ G E A G G +P ++ +S T +SDV+ YGV + EL+T G KP
Sbjct: 163 GLAKLLGAEEKEYHAEG--GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 220
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 103/235 (43%), Gaps = 34/235 (14%)
Query: 513 GTLLAEGKFGPVYRGFLPG--------GIHVAVKVLVHGSTLTD-QEAARELEYLGRI-K 562
G L EG FG V G + VAVK+L +T D + E+E + I K
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 563 HPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLH-DLPLGVQXXXXXXXXXXXXXXXNSI 621
H N++ L G C I +Y GNL+ L P G++ I
Sbjct: 100 HKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY-------------DI 146
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
V E + T++ AR + +L S IHRD+ A +V + N +++DF
Sbjct: 147 NRVPEEQM--TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADF 201
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT 733
GLA+ N + + + G +P ++ P++ F T +SDV+ +GV++ E+ T
Sbjct: 202 GLARDINNI--DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 122/294 (41%), Gaps = 57/294 (19%)
Query: 516 LAEGKFGPVYRGFLPG-GIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCI 574
L G++G VY G + VAVK L T+ +E +E + IKHPNLV L G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 575 AGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWR 634
I ++M GNL + L + + Q V + LL
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLREC---------------------NRQEVSAVVLLY--- 115
Query: 635 FRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEE 694
+A + A+ +L IHRD+ A + + N +++DFGL+++ D
Sbjct: 116 ----MATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG--DTY 166
Query: 695 IARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNL 750
A + P ++ P+S + + KSDV+ +GV+L E+ T G P YP G
Sbjct: 167 TAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP----YP----GID 217
Query: 751 VSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQI 804
+S V L+ + R PE E+ ++ C P RPS +I
Sbjct: 218 LSQVYELLEKD---------YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 122/294 (41%), Gaps = 57/294 (19%)
Query: 516 LAEGKFGPVYRGFLPG-GIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCI 574
L G++G VY G + VAVK L T+ +E +E + IKHPNLV L G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 575 AGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWR 634
I ++M GNL + L + + Q V + LL
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLREC---------------------NRQEVSAVVLLY--- 115
Query: 635 FRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEE 694
+A + A+ +L IHRD+ A + + N +++DFGL+++ D
Sbjct: 116 ----MATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG--DTY 166
Query: 695 IARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNL 750
A + P ++ P+S + + KSDV+ +GV+L E+ T G P YP G
Sbjct: 167 TAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP----YP----GID 217
Query: 751 VSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQI 804
+S V L+ + R PE E+ ++ C P RPS +I
Sbjct: 218 LSQVYELLEKD---------YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 122/294 (41%), Gaps = 57/294 (19%)
Query: 516 LAEGKFGPVYRGFLPG-GIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCI 574
L G++G VY G + VAVK L T+ +E +E + IKHPNLV L G C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 575 AGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWR 634
I ++M GNL + L + + Q V + LL
Sbjct: 81 REPPFYIIIEFMTYGNLLDYLREC---------------------NRQEVNAVVLLY--- 116
Query: 635 FRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEE 694
+A + A+ +L IHRD+ A + + N +++DFGL+++ D
Sbjct: 117 ----MATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG--DTX 167
Query: 695 IARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNL 750
A + P ++ P+S + + KSDV+ +GV+L E+ T G P YP G
Sbjct: 168 TAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP----YP----GID 218
Query: 751 VSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQI 804
+S V L+ + R PE E+ ++ C P RPS +I
Sbjct: 219 LSQVYELLEKD---------YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 263
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 103/235 (43%), Gaps = 34/235 (14%)
Query: 513 GTLLAEGKFGPVYRGFLPG--------GIHVAVKVLVHGSTLTD-QEAARELEYLGRI-K 562
G L EG FG V G + VAVK+L +T D + E+E + I K
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGK 99
Query: 563 HPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLH-DLPLGVQXXXXXXXXXXXXXXXNSI 621
H N++ L G C I +Y GNL+ L P G++ I
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY-------------DI 146
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
V E + T++ AR + +L S IHRD+ A +V + N +++DF
Sbjct: 147 NRVPEEQM--TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADF 201
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT 733
GLA+ N + + + G +P ++ P++ F T +SDV+ +GV++ E+ T
Sbjct: 202 GLARDINNI--DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 122/294 (41%), Gaps = 57/294 (19%)
Query: 516 LAEGKFGPVYRGFLPG-GIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCI 574
L G++G VY G + VAVK L T+ +E +E + IKHPNLV L G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 575 AGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWR 634
I ++M GNL + L + + Q V + LL
Sbjct: 85 REPPFYIITEFMTYGNLLDYLREC---------------------NRQEVNAVVLLY--- 120
Query: 635 FRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEE 694
+A + A+ +L IHRD+ A + + N +++DFGL+++ D
Sbjct: 121 ----MATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG--DTX 171
Query: 695 IARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNL 750
A + P ++ P+S + + KSDV+ +GV+L E+ T G P YP G
Sbjct: 172 TAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP----YP----GID 222
Query: 751 VSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQI 804
+S V L+ + R PE E+ ++ C P RPS +I
Sbjct: 223 LSQVYELLEKD---------YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 122/294 (41%), Gaps = 57/294 (19%)
Query: 516 LAEGKFGPVYRGFLPG-GIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCI 574
L G++G VY G + VAVK L T+ +E +E + IKHPNLV L G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 575 AGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWR 634
I ++M GNL + L + + Q V + LL
Sbjct: 80 REPPFYIITEFMTYGNLLDYLREC---------------------NRQEVNAVVLLY--- 115
Query: 635 FRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEE 694
+A + A+ +L IHRD+ A + + N +++DFGL+++ D
Sbjct: 116 ----MATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG--DTY 166
Query: 695 IARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNL 750
A + P ++ P+S + + KSDV+ +GV+L E+ T G P YP G
Sbjct: 167 TAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP----YP----GID 217
Query: 751 VSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQI 804
+S V L+ + R PE E+ ++ C P RPS +I
Sbjct: 218 LSQVYELLEKD---------YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 115/257 (44%), Gaps = 51/257 (19%)
Query: 554 ELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXX 613
EL L R+ HPN+V L G C+ + + +Y E G+L N+LH
Sbjct: 52 ELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLH----------------- 92
Query: 614 XXXXXNSIQNVGSEGL-LTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDM 672
G+E L T L ++ +A+LH +IHRD+K ++ L
Sbjct: 93 -----------GAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVA 141
Query: 673 N-LEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLEL 731
++ DFG A + +GS ++ PE + S++ + K DV+ +G++L E+
Sbjct: 142 GGTVLKICDFGTACDIQTHMTNN--KGSAAWMAPEVFE-GSNY-SEKCDVFSWGIILWEV 197
Query: 732 ITGKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCT 791
IT +KP ++ G + V N G+R P I++ K +E + C
Sbjct: 198 ITRRKPF------DEIGGPAFRIMWAVHN--GTRP--PLIKNL--PKPIESLMT---RCW 242
Query: 792 ADLPLKRPSMQQIVGLL 808
+ P +RPSM++IV ++
Sbjct: 243 SKDPSQRPSMEEIVKIM 259
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 122/294 (41%), Gaps = 57/294 (19%)
Query: 516 LAEGKFGPVYRGFLPG-GIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCI 574
L G++G VY G + VAVK L T+ +E +E + IKHPNLV L G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 575 AGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWR 634
I ++M GNL + L + + Q V + LL
Sbjct: 80 REPPFYIITEFMTYGNLLDYLREC---------------------NRQEVSAVVLLY--- 115
Query: 635 FRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEE 694
+A + A+ +L IHRD+ A + + N +++DFGL+++ D
Sbjct: 116 ----MATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG--DTY 166
Query: 695 IARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNL 750
A + P ++ P+S + + KSDV+ +GV+L E+ T G P YP G
Sbjct: 167 TAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP----YP----GID 217
Query: 751 VSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQI 804
+S V L+ + R PE E+ ++ C P RPS +I
Sbjct: 218 LSQVYELLEKD---------YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 103/235 (43%), Gaps = 34/235 (14%)
Query: 513 GTLLAEGKFGPVYRGFLPG--------GIHVAVKVLVHGSTLTD-QEAARELEYLGRI-K 562
G L EG FG V G + VAVK+L +T D + E+E + I K
Sbjct: 27 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 86
Query: 563 HPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLH-DLPLGVQXXXXXXXXXXXXXXXNSI 621
H N++ L G C I +Y GNL+ L P G++ I
Sbjct: 87 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY-------------DI 133
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
V E + T++ AR + +L S IHRD+ A +V + N +++DF
Sbjct: 134 NRVPEEQM--TFKDLVSCTYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADF 188
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT 733
GLA+ N + + + G +P ++ P++ F T +SDV+ +GV++ E+ T
Sbjct: 189 GLARDINNI--DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 122/294 (41%), Gaps = 57/294 (19%)
Query: 516 LAEGKFGPVYRGFLPG-GIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCI 574
L G++G VY G + VAVK L T+ +E +E + IKHPNLV L G C
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 92
Query: 575 AGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWR 634
I ++M GNL + L + + Q V + LL
Sbjct: 93 REPPFYIITEFMTYGNLLDYLREC---------------------NRQEVNAVVLLY--- 128
Query: 635 FRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEE 694
+A + A+ +L IHRD+ A + + N +++DFGL+++ D
Sbjct: 129 ----MATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG--DTY 179
Query: 695 IARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNL 750
A + P ++ P+S + + KSDV+ +GV+L E+ T G P YP G
Sbjct: 180 TAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP----YP----GID 230
Query: 751 VSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQI 804
+S V L+ + R PE E+ ++ C P RPS +I
Sbjct: 231 LSQVYELLEKD---------YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 275
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 107/240 (44%), Gaps = 45/240 (18%)
Query: 508 SNFDRGTLLAEGKFGPVYRG-FLPGG----IHVAVKVLVHGST-LTDQEAARELEYLGRI 561
+ F + +L+ G FG VY+G ++P G I VA+K L ++ ++E E + +
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 562 KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSI 621
+P++ L G C+ +Q + +P G
Sbjct: 82 DNPHVCRLLGICL-------------TSTVQLITQLMPFGC----------LLDYVREHK 118
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
N+GS+ LL W + A+ + +L ++HRD+ A +V + +++DF
Sbjct: 119 DNIGSQYLLN-W------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDF 168
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT-GKKP 737
GLAK+ G E A G G +P ++ +S T +SDV+ YGV + EL+T G KP
Sbjct: 169 GLAKLLGAEEKEYHAEG--GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 122/294 (41%), Gaps = 57/294 (19%)
Query: 516 LAEGKFGPVYRGFLPG-GIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCI 574
L G++G VY G + VAVK L T+ +E +E + IKHPNLV L G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 575 AGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWR 634
I ++M GNL + L + + Q V + LL
Sbjct: 80 REPPFYIITEFMTYGNLLDYLREC---------------------NRQEVSAVVLLY--- 115
Query: 635 FRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEE 694
+A + A+ +L IHRD+ A + + N +++DFGL+++ D
Sbjct: 116 ----MATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG--DTY 166
Query: 695 IARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNL 750
A + P ++ P+S + + KSDV+ +GV+L E+ T G P YP G
Sbjct: 167 TAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP----YP----GID 217
Query: 751 VSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQI 804
+S V L+ + R PE E+ ++ C P RPS +I
Sbjct: 218 LSQVYELLEKD---------YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 122/294 (41%), Gaps = 57/294 (19%)
Query: 516 LAEGKFGPVYRGFLPG-GIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCI 574
L G++G VY G + VAVK L T+ +E +E + IKHPNLV L G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 575 AGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWR 634
I ++M GNL + L + + Q V + LL
Sbjct: 85 REPPFYIITEFMTYGNLLDYLREC---------------------NRQEVSAVVLLY--- 120
Query: 635 FRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEE 694
+A + A+ +L IHRD+ A + + N +++DFGL+++ D
Sbjct: 121 ----MATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG--DTY 171
Query: 695 IARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNL 750
A + P ++ P+S + + KSDV+ +GV+L E+ T G P YP G
Sbjct: 172 TAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP----YP----GID 222
Query: 751 VSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQI 804
+S V L+ + R PE E+ ++ C P RPS +I
Sbjct: 223 LSQVYELLEKD---------YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 63/123 (51%), Gaps = 7/123 (5%)
Query: 629 LLTTWRFRHKIALGTARALAFLHHGCSPP-IIHRDIKASSVYLDMNLEPRLSDFGLAK-- 685
L+ R + K A R + C I+HRD+KA ++ LD ++ +++DFG +
Sbjct: 104 LVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEF 163
Query: 686 IFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL-GDDYPE 744
FGN LDE GSP Y PE Q + P+ DV+ GV+L L++G P G + E
Sbjct: 164 TFGNKLDEFC--GSPPYAAPELFQ-GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE 220
Query: 745 EKE 747
+E
Sbjct: 221 LRE 223
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 130/300 (43%), Gaps = 59/300 (19%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIA 575
L +G FG V+ G G VA+K L G T++ + +E + + +++H LV L Y +
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQL--YAVV 75
Query: 576 GDQRIAIY-DYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWR 634
++ I I +YM G+L + L G G
Sbjct: 76 SEEPIYIVTEYMSKGSLLDFLK----------------------------GETGKYLRLP 107
Query: 635 FRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEE 694
+A A +A++ +HRD++A+++ + NL +++DFGLA++ + +E
Sbjct: 108 QLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIED--NEY 162
Query: 695 IARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNL 750
AR + P ++ P++ T KSDV+ +G++L EL T G+ P YP
Sbjct: 163 TARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP----YP------- 210
Query: 751 VSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKD 810
G+V N + ++ R P + E + C P +RP+ + + L+D
Sbjct: 211 -----GMV-NREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 264
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 130/300 (43%), Gaps = 59/300 (19%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIA 575
L +G FG V+ G G VA+K L G T++ + +E + + +I+H LV L Y +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKIRHEKLVQL--YAVV 82
Query: 576 GDQRIAIY-DYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWR 634
++ I I +YM G+L + L G G
Sbjct: 83 SEEPIYIVTEYMSKGSLLDFLK----------------------------GEMGKYLRLP 114
Query: 635 FRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEE 694
+A A +A++ +HRD++A+++ + NL +++DFGLA++ + +E
Sbjct: 115 QLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIED--NEY 169
Query: 695 IARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNL 750
AR + P ++ P++ T KSDV+ +G++L EL T G+ P YP
Sbjct: 170 TARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP----YP------- 217
Query: 751 VSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKD 810
G+V N + ++ R P + E + C P +RP+ + + L+D
Sbjct: 218 -----GMV-NREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 122/294 (41%), Gaps = 57/294 (19%)
Query: 516 LAEGKFGPVYRGFLPG-GIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCI 574
L G++G VY G + VAVK L T+ +E +E + IKHPNLV L G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 575 AGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWR 634
I ++M GNL + L + + Q V + LL
Sbjct: 82 REPPFYIITEFMTYGNLLDYLREC---------------------NRQEVNAVVLLY--- 117
Query: 635 FRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEE 694
+A + A+ +L IHRD+ A + + N +++DFGL+++ D
Sbjct: 118 ----MATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG--DTY 168
Query: 695 IARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNL 750
A + P ++ P+S + + KSDV+ +GV+L E+ T G P YP G
Sbjct: 169 TAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP----YP----GID 219
Query: 751 VSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQI 804
+S V L+ + R PE E+ ++ C P RPS +I
Sbjct: 220 LSQVYELLEKD---------YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 109/240 (45%), Gaps = 45/240 (18%)
Query: 508 SNFDRGTLLAEGKFGPVYRG-FLPGG----IHVAVKVLVHG-STLTDQEAARELEYLGRI 561
+ F + +L+ G FG VY+G ++P G I VA+K L S ++E E + +
Sbjct: 15 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 562 KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSI 621
+P++ L G C+ ++ I M G L + + +
Sbjct: 75 DNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVRE----------------------HK 111
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
N+GS+ LL W + A+ + +L ++HRD+ A +V + +++DF
Sbjct: 112 DNIGSQYLLN-W------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDF 161
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT-GKKP 737
GLAK+ G E A G G +P ++ +S T +SDV+ YGV + EL+T G KP
Sbjct: 162 GLAKLLGAEEKEYHAEG--GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 122/294 (41%), Gaps = 57/294 (19%)
Query: 516 LAEGKFGPVYRGFLPG-GIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCI 574
L G++G VY G + VAVK L T+ +E +E + IKHPNLV L G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 575 AGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWR 634
I ++M GNL + L + + Q V + LL
Sbjct: 85 REPPFYIIIEFMTYGNLLDYLREC---------------------NRQEVNAVVLLY--- 120
Query: 635 FRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEE 694
+A + A+ +L IHRD+ A + + N +++DFGL+++ D
Sbjct: 121 ----MATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG--DTY 171
Query: 695 IARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNL 750
A + P ++ P+S + + KSDV+ +GV+L E+ T G P YP G
Sbjct: 172 TAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP----YP----GID 222
Query: 751 VSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQI 804
+S V L+ + R PE E+ ++ C P RPS +I
Sbjct: 223 LSQVYELLEKD---------YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 122/294 (41%), Gaps = 57/294 (19%)
Query: 516 LAEGKFGPVYRGFLPG-GIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCI 574
L G++G VY G + VAVK L T+ +E +E + IKHPNLV L G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 575 AGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWR 634
I ++M GNL + L + + Q V + LL
Sbjct: 82 REPPFYIITEFMTYGNLLDYLREC---------------------NRQEVNAVVLLY--- 117
Query: 635 FRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEE 694
+A + A+ +L IHRD+ A + + N +++DFGL+++ D
Sbjct: 118 ----MATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG--DTY 168
Query: 695 IARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNL 750
A + P ++ P+S + + KSDV+ +GV+L E+ T G P YP G
Sbjct: 169 TAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP----YP----GID 219
Query: 751 VSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQI 804
+S V L+ + R PE E+ ++ C P RPS +I
Sbjct: 220 LSQVYELLEKD---------YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 122/294 (41%), Gaps = 57/294 (19%)
Query: 516 LAEGKFGPVYRGFLPG-GIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCI 574
L G++G VY G + VAVK L T+ +E +E + IKHPNLV L G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 575 AGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWR 634
I ++M GNL + L + + Q V + LL
Sbjct: 85 REPPFYIITEFMTYGNLLDYLREC---------------------NRQEVNAVVLLY--- 120
Query: 635 FRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEE 694
+A + A+ +L IHRD+ A + + N +++DFGL+++ D
Sbjct: 121 ----MATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG--DTY 171
Query: 695 IARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNL 750
A + P ++ P+S + + KSDV+ +GV+L E+ T G P YP G
Sbjct: 172 TAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP----YP----GID 222
Query: 751 VSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQI 804
+S V L+ + R PE E+ ++ C P RPS +I
Sbjct: 223 LSQVYELLEKD---------YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 115/257 (44%), Gaps = 51/257 (19%)
Query: 554 ELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXX 613
EL L R+ HPN+V L G C+ + + +Y E G+L N+LH
Sbjct: 51 ELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLH----------------- 91
Query: 614 XXXXXNSIQNVGSEGL-LTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDM 672
G+E L T L ++ +A+LH +IHRD+K ++ L
Sbjct: 92 -----------GAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVA 140
Query: 673 N-LEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLEL 731
++ DFG A + +GS ++ PE + S++ + K DV+ +G++L E+
Sbjct: 141 GGTVLKICDFGTACDIQTHMTNN--KGSAAWMAPEVFE-GSNY-SEKCDVFSWGIILWEV 196
Query: 732 ITGKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCT 791
IT +KP ++ G + V N G+R P I++ K +E + C
Sbjct: 197 ITRRKPF------DEIGGPAFRIMWAVHN--GTRP--PLIKNL--PKPIESLMT---RCW 241
Query: 792 ADLPLKRPSMQQIVGLL 808
+ P +RPSM++IV ++
Sbjct: 242 SKDPSQRPSMEEIVKIM 258
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 103/235 (43%), Gaps = 34/235 (14%)
Query: 513 GTLLAEGKFGPVYRGFLPG--------GIHVAVKVLVHGSTLTD-QEAARELEYLGRI-K 562
G L EG FG V G + VAVK+L +T D + E+E + I K
Sbjct: 29 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 88
Query: 563 HPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLH-DLPLGVQXXXXXXXXXXXXXXXNSI 621
H N++ L G C I +Y GNL+ L P G++ I
Sbjct: 89 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY-------------DI 135
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
V E + T++ AR + +L S IHRD+ A +V + N +++DF
Sbjct: 136 NRVPEEQM--TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADF 190
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT 733
GLA+ N + + + G +P ++ P++ F T +SDV+ +GV++ E+ T
Sbjct: 191 GLARDINNI--DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 122/294 (41%), Gaps = 57/294 (19%)
Query: 516 LAEGKFGPVYRGFLPG-GIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCI 574
L G++G VY G + VAVK L T+ +E +E + IKHPNLV L G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 575 AGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWR 634
I ++M GNL + L + + Q V + LL
Sbjct: 85 REPPFYIITEFMTYGNLLDYLREC---------------------NRQEVNAVVLLY--- 120
Query: 635 FRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEE 694
+A + A+ +L IHRD+ A + + N +++DFGL+++ D
Sbjct: 121 ----MATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG--DTY 171
Query: 695 IARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNL 750
A + P ++ P+S + + KSDV+ +GV+L E+ T G P YP G
Sbjct: 172 TAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP----YP----GID 222
Query: 751 VSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQI 804
+S V L+ + R PE E+ ++ C P RPS +I
Sbjct: 223 LSQVYELLEKD---------YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 109/240 (45%), Gaps = 45/240 (18%)
Query: 508 SNFDRGTLLAEGKFGPVYRG-FLPGG----IHVAVKVLVHGST-LTDQEAARELEYLGRI 561
+ F + +L G FG VY+G ++P G I VA+K L ++ ++E E + +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 562 KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSI 621
+P++ L G C+ ++ I M G L + + +
Sbjct: 75 DNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVRE----------------------HK 111
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
N+GS+ LL W + A+ + +L ++HRD+ A +V + +++DF
Sbjct: 112 DNIGSQYLLN-W------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDF 161
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT-GKKP 737
GLAK+ G E A G G +P ++ +S T +SDV+ YGV + EL+T G KP
Sbjct: 162 GLAKLLGAEEKEYHAEG--GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 106/240 (44%), Gaps = 45/240 (18%)
Query: 508 SNFDRGTLLAEGKFGPVYRG-FLPGG----IHVAVKVLVHGST-LTDQEAARELEYLGRI 561
+ F + +L G FG VY+G ++P G I VA+K L ++ ++E E + +
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 68
Query: 562 KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSI 621
+P++ L G C+ +Q + +P G
Sbjct: 69 DNPHVCRLLGICL-------------TSTVQLITQLMPFGC----------LLDYVREHK 105
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
N+GS+ LL W + A+ + +L ++HRD+ A +V + +++DF
Sbjct: 106 DNIGSQYLLN-W------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDF 155
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT-GKKP 737
GLAK+ G E A G G +P ++ +S T +SDV+ YGV + EL+T G KP
Sbjct: 156 GLAKLLGAEEKEYHAEG--GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 213
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 106/240 (44%), Gaps = 45/240 (18%)
Query: 508 SNFDRGTLLAEGKFGPVYRG-FLPGG----IHVAVKVLVHGST-LTDQEAARELEYLGRI 561
+ F + +L G FG VY+G ++P G I VA+K L ++ ++E E + +
Sbjct: 25 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 84
Query: 562 KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSI 621
+P++ L G C+ +Q + +P G
Sbjct: 85 DNPHVCRLLGICL-------------TSTVQLITQLMPFGC----------LLDYVREHK 121
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
N+GS+ LL W + A+ + +L ++HRD+ A +V + +++DF
Sbjct: 122 DNIGSQYLLN-W------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDF 171
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT-GKKP 737
GLAK+ G E A G G +P ++ +S T +SDV+ YGV + EL+T G KP
Sbjct: 172 GLAKLLGAEEKEYHAEG--GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 229
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 122/294 (41%), Gaps = 57/294 (19%)
Query: 516 LAEGKFGPVYRGFLPG-GIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCI 574
L G++G VY G + VAVK L T+ +E +E + IKHPNLV L G C
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 83
Query: 575 AGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWR 634
I ++M GNL + L + + Q V + LL
Sbjct: 84 REPPFYIITEFMTYGNLLDYLREC---------------------NRQEVNAVVLLY--- 119
Query: 635 FRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEE 694
+A + A+ +L IHRD+ A + + N +++DFGL+++ D
Sbjct: 120 ----MATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG--DTY 170
Query: 695 IARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNL 750
A + P ++ P+S + + KSDV+ +GV+L E+ T G P YP G
Sbjct: 171 TAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP----YP----GID 221
Query: 751 VSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQI 804
+S V L+ + R PE E+ ++ C P RPS +I
Sbjct: 222 LSQVYELLEKD---------YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 266
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 108/240 (45%), Gaps = 45/240 (18%)
Query: 508 SNFDRGTLLAEGKFGPVYRG-FLPGG----IHVAVKVLVHG-STLTDQEAARELEYLGRI 561
+ F + +L G FG VY+G ++P G I VA+K L S ++E E + +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 562 KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSI 621
+P++ L G C+ ++ I M G L + + +
Sbjct: 75 DNPHVCRLLGICLTSTVQL-ITQLMPFGXLLDYVRE----------------------HK 111
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
N+GS+ LL W + A+ + +L ++HRD+ A +V + +++DF
Sbjct: 112 DNIGSQYLLN-W------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDF 161
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT-GKKP 737
GLAK+ G E A G G +P ++ +S T +SDV+ YGV + EL+T G KP
Sbjct: 162 GLAKLLGAEEKEYHAEG--GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 120/258 (46%), Gaps = 37/258 (14%)
Query: 504 LSATSNFDRGTLLAEGKFGPVYRGF-LPGGIHVAVK-VLVHGSTLTDQEAARELEYLGRI 561
+S++S F + L G + VY+G G++VA+K V + T A RE+ + +
Sbjct: 1 MSSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKEL 60
Query: 562 KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSI 621
KH N+V L ++ ++++M+N +L+ + +G N+
Sbjct: 61 KHENIVRLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVG-----------------NTP 102
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
+ G E L + F+ ++ G LAF H I+HRD+K ++ ++ + +L DF
Sbjct: 103 R--GLELNLVKY-FQWQLLQG----LAFCHEN---KILHRDLKPQNLLINKRGQLKLGDF 152
Query: 682 GLAKIFG---NGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
GLA+ FG N E+ + Y P+ + T D++ G +L E+ITG KPL
Sbjct: 153 GLARAFGIPVNTFSSEVV--TLWYRAPDVLMGSRTYST-SIDIWSCGCILAEMITG-KPL 208
Query: 739 GDDYPEEKEGNLVSWVRG 756
+E++ L+ + G
Sbjct: 209 FPGTNDEEQLKLIFDIMG 226
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 103/235 (43%), Gaps = 34/235 (14%)
Query: 513 GTLLAEGKFGPVYRGFLPG--------GIHVAVKVLVHGSTLTD-QEAARELEYLGRI-K 562
G L EG FG V G + VAVK+L +T D + E+E + I K
Sbjct: 32 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 91
Query: 563 HPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLH-DLPLGVQXXXXXXXXXXXXXXXNSI 621
H N++ L G C I +Y GNL+ L P G++ I
Sbjct: 92 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY-------------DI 138
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
V E + T++ AR + +L S IHRD+ A +V + N +++DF
Sbjct: 139 NRVPEEQM--TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADF 193
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT 733
GLA+ N + + + G +P ++ P++ F T +SDV+ +GV++ E+ T
Sbjct: 194 GLARDINNI--DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 130/300 (43%), Gaps = 59/300 (19%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIA 575
L +G FG V+ G G VA+K L G T++ + +E + + +++H LV L Y +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQL--YAVV 82
Query: 576 GDQRIAIY-DYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWR 634
++ I I +YM G+L + L G G
Sbjct: 83 SEEPIYIVIEYMSKGSLLDFLK----------------------------GEMGKYLRLP 114
Query: 635 FRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEE 694
+A A +A++ +HRD++A+++ + NL +++DFGLA++ + +E
Sbjct: 115 QLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIED--NEX 169
Query: 695 IARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNL 750
AR + P ++ P++ T KSDV+ +G++L EL T G+ P YP
Sbjct: 170 TARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP----YP------- 217
Query: 751 VSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKD 810
G+V N + ++ R P + E + C P +RP+ + + L+D
Sbjct: 218 -----GMV-NREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 103/235 (43%), Gaps = 34/235 (14%)
Query: 513 GTLLAEGKFGPVYRGFLPG--------GIHVAVKVLVHGSTLTD-QEAARELEYLGRI-K 562
G L EG FG V G + VAVK+L +T D + E+E + I K
Sbjct: 86 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 145
Query: 563 HPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLH-DLPLGVQXXXXXXXXXXXXXXXNSI 621
H N++ L G C I +Y GNL+ L P G++ I
Sbjct: 146 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY-------------DI 192
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
V E + T++ AR + +L S IHRD+ A +V + N +++DF
Sbjct: 193 NRVPEEQM--TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADF 247
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT 733
GLA+ N + + + G +P ++ P++ F T +SDV+ +GV++ E+ T
Sbjct: 248 GLARDINNI--DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 105/240 (43%), Gaps = 45/240 (18%)
Query: 508 SNFDRGTLLAEGKFGPVYRG-FLPGG----IHVAVKVLVHG-STLTDQEAARELEYLGRI 561
+ F + +L G FG VY+G ++P G I VA+K L S ++E E + +
Sbjct: 21 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 80
Query: 562 KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSI 621
+P++ L G C+ +Q + +P G
Sbjct: 81 DNPHVCRLLGICL-------------TSTVQLITQLMPFGC----------LLDYVREHK 117
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
N+GS+ LL W + A+ + +L ++HRD+ A +V + +++DF
Sbjct: 118 DNIGSQYLLN-W------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDF 167
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT-GKKP 737
GLAK+ G E A G G +P ++ +S T +SDV+ YGV + EL+T G KP
Sbjct: 168 GLAKLLGAEEKEYHAEG--GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 225
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 121/294 (41%), Gaps = 57/294 (19%)
Query: 516 LAEGKFGPVYRGFLPG-GIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCI 574
L G++G VY G + VAVK L T+ +E +E + IKHPNLV L G C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 575 AGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWR 634
I ++M GNL + L + + Q V + LL
Sbjct: 78 REPPFYIIIEFMTYGNLLDYLREC---------------------NRQEVSAVVLLY--- 113
Query: 635 FRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEE 694
+A + A+ +L IHRD+ A + + N +++DFGL+++ D
Sbjct: 114 ----MATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG--DTX 164
Query: 695 IARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNL 750
A + P ++ P+S + + KSDV+ +GV+L E+ T G P YP G
Sbjct: 165 TAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP----YP----GID 215
Query: 751 VSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQI 804
S V L+ + R PE E+ ++ C P RPS +I
Sbjct: 216 PSQVYELLEKD---------YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 109/240 (45%), Gaps = 45/240 (18%)
Query: 508 SNFDRGTLLAEGKFGPVYRG-FLPGG----IHVAVKVLVHGST-LTDQEAARELEYLGRI 561
+ F + +L G FG VY+G ++P G I VA+K L ++ ++E E + +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 562 KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSI 621
+P++ L G C+ ++ I M G L + + +
Sbjct: 77 DNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVRE----------------------HK 113
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
N+GS+ LL W + A+ + +L ++HRD+ A +V + +++DF
Sbjct: 114 DNIGSQYLLN-W------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDF 163
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT-GKKP 737
GLAK+ G E A G G +P ++ +S T +SDV+ YGV + EL+T G KP
Sbjct: 164 GLAKLLGAEEKEYHAEG--GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 106/240 (44%), Gaps = 45/240 (18%)
Query: 508 SNFDRGTLLAEGKFGPVYRG-FLPGG----IHVAVKVLVHGST-LTDQEAARELEYLGRI 561
+ F + +L G FG VY+G ++P G I VA+K L ++ ++E E + +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 562 KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSI 621
+P++ L G C+ +Q + +P G
Sbjct: 75 DNPHVCRLLGICL-------------TSTVQLITQLMPFGC----------LLDYVREHK 111
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
N+GS+ LL W + A+ + +L ++HRD+ A +V + +++DF
Sbjct: 112 DNIGSQYLLN-W------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDF 161
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT-GKKP 737
GLAK+ G E A G G +P ++ +S T +SDV+ YGV + EL+T G KP
Sbjct: 162 GLAKLLGAEEKEYHAEG--GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 135/357 (37%), Gaps = 73/357 (20%)
Query: 506 ATSNFDRGTLLAEGKFGPVYRGFL------PGGIHVAVKVLVHGSTLTDQEA-ARELEYL 558
A G L G FG V + P VAVK+L G+T ++ +A EL+ L
Sbjct: 25 ARERLKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTELKIL 84
Query: 559 GRI-KHPNLVPLTGYCIA-GDQRIAIYDYMENGNLQNLLH----------DLPLGVQXXX 606
I H N+V L G C G + I +Y + GNL N L D L ++
Sbjct: 85 THIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKRDLFFLNKDAALHMEPKK 144
Query: 607 XXXXXXXXXXXXNSIQNVGSEGLLTTWRFRHKIALG------------------------ 642
+ +V S + F+ +L
Sbjct: 145 EKMEPGLEQGKKPRLDSVTSSESFASSGFQEDKSLSDVEEEEDSDGFYKEPITMEDLISY 204
Query: 643 ---TARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAK-IFGNGLDEEIARG 698
AR + FL S IHRD+ A ++ L N ++ DFGLA+ I+ N + R
Sbjct: 205 SFQVARGMEFLS---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKN---PDYVRK 258
Query: 699 SPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNLVSWV 754
+P ++ P+S F + KSDV+ YGV+L E+ + G P YP
Sbjct: 259 GDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSP----YP----------- 303
Query: 755 RGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDI 811
G+ + + +R PE E +I C P +RP ++V L D+
Sbjct: 304 -GVQMDEDFCSRLREGMRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAELVEKLGDL 359
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 109/240 (45%), Gaps = 45/240 (18%)
Query: 508 SNFDRGTLLAEGKFGPVYRG-FLPGG----IHVAVKVLVHGST-LTDQEAARELEYLGRI 561
+ F + +L G FG VY+G ++P G I VA+K L ++ ++E E + +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 562 KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSI 621
+P++ L G C+ ++ I M G L + + +
Sbjct: 78 DNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVRE----------------------HK 114
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
N+GS+ LL W + A+ + +L ++HRD+ A +V + +++DF
Sbjct: 115 DNIGSQYLLN-W------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDF 164
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT-GKKP 737
GLAK+ G E A G G +P ++ +S T +SDV+ YGV + EL+T G KP
Sbjct: 165 GLAKLLGAEEKEYHAEG--GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 105/240 (43%), Gaps = 45/240 (18%)
Query: 508 SNFDRGTLLAEGKFGPVYRG-FLPGG----IHVAVKVLVHG-STLTDQEAARELEYLGRI 561
+ F + +L G FG VY+G ++P G I VA+K L S ++E E + +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 562 KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSI 621
+P++ L G C+ +Q + +P G
Sbjct: 78 DNPHVCRLLGICL-------------TSTVQLITQLMPFGC----------LLDYVREHK 114
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
N+GS+ LL W + A+ + +L ++HRD+ A +V + +++DF
Sbjct: 115 DNIGSQYLLN-W------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDF 164
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT-GKKP 737
GLAK+ G E A G G +P ++ +S T +SDV+ YGV + EL+T G KP
Sbjct: 165 GLAKLLGAEEKEYHAEG--GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 106/240 (44%), Gaps = 45/240 (18%)
Query: 508 SNFDRGTLLAEGKFGPVYRG-FLPGG----IHVAVKVLVHGST-LTDQEAARELEYLGRI 561
+ F + +L G FG VY+G ++P G I VA+K L ++ ++E E + +
Sbjct: 40 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 99
Query: 562 KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSI 621
+P++ L G C+ +Q + +P G
Sbjct: 100 DNPHVCRLLGICL-------------TSTVQLITQLMPFGC----------LLDYVREHK 136
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
N+GS+ LL W + A+ + +L ++HRD+ A +V + +++DF
Sbjct: 137 DNIGSQYLLN-W------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDF 186
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT-GKKP 737
GLAK+ G E A G G +P ++ +S T +SDV+ YGV + EL+T G KP
Sbjct: 187 GLAKLLGAEEKEYHAEG--GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 244
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 106/240 (44%), Gaps = 45/240 (18%)
Query: 508 SNFDRGTLLAEGKFGPVYRG-FLPGG----IHVAVKVLVHGST-LTDQEAARELEYLGRI 561
+ F + +L G FG VY+G ++P G I VA+K L ++ ++E E + +
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 562 KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSI 621
+P++ L G C+ +Q + +P G
Sbjct: 82 DNPHVCRLLGICL-------------TSTVQLITQLMPFGC----------LLDYVREHK 118
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
N+GS+ LL W + A+ + +L ++HRD+ A +V + +++DF
Sbjct: 119 DNIGSQYLLN-W------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDF 168
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT-GKKP 737
GLAK+ G E A G G +P ++ +S T +SDV+ YGV + EL+T G KP
Sbjct: 169 GLAKLLGAEEKEYHAEG--GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 62.0 bits (149), Expect = 1e-09, Method: Composition-based stats.
Identities = 70/300 (23%), Positives = 124/300 (41%), Gaps = 57/300 (19%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIA 575
L G+FG V G G VA+K++ GS +++ E E + + + H LV L G C
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 74
Query: 576 GDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWRF 635
I +YM NG L N L ++ Q ++ LL
Sbjct: 75 QRPIFIITEYMANGCLLNYLREMRHRFQ----------------------TQQLL----- 107
Query: 636 RHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEI 695
++ A+ +L S +HRD+ A + ++ ++SDFGL++ LD+E
Sbjct: 108 --EMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV---LDDEY 159
Query: 696 ARGSPGYIPPEFAQPD----SDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLV 751
P ++ P+ S F + KSD++ +GV++ E+ + K P E+
Sbjct: 160 TSSVGSKFPVRWSPPEVLMYSKF-SSKSDIWAFGVLMWEIYSLGK-----MPYER----- 208
Query: 752 SWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDI 811
N++ + I +R P E+ I Y C + +RP+ + ++ + D+
Sbjct: 209 ------FTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDV 262
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 62.0 bits (149), Expect = 1e-09, Method: Composition-based stats.
Identities = 70/300 (23%), Positives = 124/300 (41%), Gaps = 57/300 (19%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIA 575
L G+FG V G G VA+K++ GS +++ E E + + + H LV L G C
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 70
Query: 576 GDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWRF 635
I +YM NG L N L ++ Q ++ LL
Sbjct: 71 QRPIFIITEYMANGCLLNYLREMRHRFQ----------------------TQQLL----- 103
Query: 636 RHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEI 695
++ A+ +L S +HRD+ A + ++ ++SDFGL++ LD+E
Sbjct: 104 --EMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV---LDDEY 155
Query: 696 ARGSPGYIPPEFAQPD----SDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLV 751
P ++ P+ S F + KSD++ +GV++ E+ + K P E+
Sbjct: 156 TSSVGSKFPVRWSPPEVLMYSKF-SSKSDIWAFGVLMWEIYSLGK-----MPYER----- 204
Query: 752 SWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDI 811
N++ + I +R P E+ I Y C + +RP+ + ++ + D+
Sbjct: 205 ------FTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDV 258
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 109/240 (45%), Gaps = 45/240 (18%)
Query: 508 SNFDRGTLLAEGKFGPVYRG-FLPGG----IHVAVKVLVHGST-LTDQEAARELEYLGRI 561
+ F + +L G FG VY+G ++P G I VA+K L ++ ++E E + +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 562 KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSI 621
+P++ L G C+ ++ I M G L + + +
Sbjct: 78 DNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVRE----------------------HK 114
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
N+GS+ LL W + A+ + +L ++HRD+ A +V + +++DF
Sbjct: 115 DNIGSQYLLN-W------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDF 164
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT-GKKP 737
GLAK+ G E A G G +P ++ +S T +SDV+ YGV + EL+T G KP
Sbjct: 165 GLAKLLGAEEKEYHAEG--GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 130/300 (43%), Gaps = 59/300 (19%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIA 575
L +G FG V+ G G VA+K L G T++ + +E + + +++H LV L Y +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQL--YAVV 79
Query: 576 GDQRIAIY-DYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWR 634
++ I I +YM G+L + L G G
Sbjct: 80 SEEPIYIVTEYMNKGSLLDFLK----------------------------GETGKYLRLP 111
Query: 635 FRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEE 694
++ A +A++ +HRD++A+++ + NL +++DFGLA++ + +E
Sbjct: 112 QLVDMSAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIED--NEW 166
Query: 695 IARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNL 750
AR + P ++ P++ T KSDV+ +G++L EL T G+ P YP
Sbjct: 167 TARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP----YP------- 214
Query: 751 VSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKD 810
G+V N + ++ R P + E + C P +RP+ + + L+D
Sbjct: 215 -----GMV-NREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 268
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 102/235 (43%), Gaps = 34/235 (14%)
Query: 513 GTLLAEGKFGPVYRGFLPG--------GIHVAVKVLVHGSTLTD-QEAARELEYLGRI-K 562
G L EG FG V G + VAVK+L +T D + E+E + I K
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 563 HPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLH-DLPLGVQXXXXXXXXXXXXXXXNSI 621
H N++ L G C I +Y GNL+ L P G++ I
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY-------------DI 146
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
V E + T++ AR + +L S IHRD+ A +V + N +++DF
Sbjct: 147 NRVPEEQM--TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADF 201
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT 733
GLA+ N + + G +P ++ P++ F T +SDV+ +GV++ E+ T
Sbjct: 202 GLARDINNI--DYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 130/300 (43%), Gaps = 59/300 (19%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIA 575
L +G FG V+ G G VA+K L G T++ + +E + + +++H LV L Y +
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQL--YAVV 73
Query: 576 GDQRIAIY-DYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWR 634
++ I I +YM G+L + L G G
Sbjct: 74 SEEPIYIVTEYMSKGSLLDFLK----------------------------GEMGKYLRLP 105
Query: 635 FRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEE 694
+A A +A++ +HRD++A+++ + NL +++DFGLA++ + +E
Sbjct: 106 QLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIED--NEY 160
Query: 695 IARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNL 750
AR + P ++ P++ T KSDV+ +G++L EL T G+ P YP
Sbjct: 161 TARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP----YP------- 208
Query: 751 VSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKD 810
G+V N + ++ R P + E + C P +RP+ + + L+D
Sbjct: 209 -----GMV-NREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLED 262
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 130/300 (43%), Gaps = 59/300 (19%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIA 575
L +G FG V+ G G VA+K L G T++ + +E + + +++H LV L Y +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQL--YAVV 82
Query: 576 GDQRIAIY-DYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWR 634
++ I I +YM G+L + L G G
Sbjct: 83 SEEPIYIVTEYMSKGSLLDFLK----------------------------GEMGKYLRLP 114
Query: 635 FRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEE 694
+A A +A++ +HRD++A+++ + NL +++DFGLA++ + +E
Sbjct: 115 QLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIED--NEY 169
Query: 695 IARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNL 750
AR + P ++ P++ T KSDV+ +G++L EL T G+ P YP
Sbjct: 170 TARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP----YP------- 217
Query: 751 VSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKD 810
G+V N + ++ R P + E + C P +RP+ + + L+D
Sbjct: 218 -----GMV-NREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 130/300 (43%), Gaps = 59/300 (19%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIA 575
L +G FG V+ G G VA+K L G T++ + +E + + +++H LV L Y +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQL--YAVV 82
Query: 576 GDQRIAIY-DYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWR 634
++ I I +YM G+L + L G G
Sbjct: 83 SEEPIYIVCEYMSKGSLLDFLK----------------------------GEMGKYLRLP 114
Query: 635 FRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEE 694
+A A +A++ +HRD++A+++ + NL +++DFGLA++ + +E
Sbjct: 115 QLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIED--NEY 169
Query: 695 IARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNL 750
AR + P ++ P++ T KSDV+ +G++L EL T G+ P YP
Sbjct: 170 TARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP----YP------- 217
Query: 751 VSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKD 810
G+V N + ++ R P + E + C P +RP+ + + L+D
Sbjct: 218 -----GMV-NREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 130/300 (43%), Gaps = 59/300 (19%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIA 575
L +G FG V+ G G VA+K L G T++ + +E + + +++H LV L Y +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQL--YAVV 82
Query: 576 GDQRIAIY-DYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWR 634
++ I I +YM G+L + L G G
Sbjct: 83 SEEPIYIVIEYMSKGSLLDFLK----------------------------GEMGKYLRLP 114
Query: 635 FRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEE 694
+A A +A++ +HRD++A+++ + NL +++DFGLA++ + +E
Sbjct: 115 QLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIED--NEY 169
Query: 695 IARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNL 750
AR + P ++ P++ T KSDV+ +G++L EL T G+ P YP
Sbjct: 170 TARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP----YP------- 217
Query: 751 VSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKD 810
G+V N + ++ R P + E + C P +RP+ + + L+D
Sbjct: 218 -----GMV-NREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 102/235 (43%), Gaps = 34/235 (14%)
Query: 513 GTLLAEGKFGPVYRGFLPG--------GIHVAVKVLVHGSTLTD-QEAARELEYLGRI-K 562
G L EG FG V G + VAVK+L +T D + E+E + I K
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 563 HPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLH-DLPLGVQXXXXXXXXXXXXXXXNSI 621
H N++ L G C I Y GNL+ L P G++ I
Sbjct: 100 HKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSY-------------DI 146
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
V E + T++ AR + +L S IHRD+ A +V + N +++DF
Sbjct: 147 NRVPEEQM--TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADF 201
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT 733
GLA+ N + + + G +P ++ P++ F T +SDV+ +GV++ E+ T
Sbjct: 202 GLARDINNI--DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 130/300 (43%), Gaps = 59/300 (19%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIA 575
L +G FG V+ G G VA+K L G T++ + +E + + +++H LV L Y +
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQL--YAVV 71
Query: 576 GDQRIAIY-DYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWR 634
++ I I +YM G+L + L G G
Sbjct: 72 SEEPIYIVTEYMSKGSLLDFLK----------------------------GEMGKYLRLP 103
Query: 635 FRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEE 694
+A A +A++ +HRD++A+++ + NL +++DFGLA++ + +E
Sbjct: 104 QLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIED--NEY 158
Query: 695 IARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNL 750
AR + P ++ P++ T KSDV+ +G++L EL T G+ P YP
Sbjct: 159 TARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP----YP------- 206
Query: 751 VSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKD 810
G+V N + ++ R P + E + C P +RP+ + + L+D
Sbjct: 207 -----GMV-NREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLED 260
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 102/235 (43%), Gaps = 34/235 (14%)
Query: 513 GTLLAEGKFGPVYRGFLPG--------GIHVAVKVLVHGSTLTD-QEAARELEYLGRI-K 562
G L EG FG V G + VAVK+L +T D + E+E + I K
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 563 HPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLH-DLPLGVQXXXXXXXXXXXXXXXNSI 621
H N++ L G C I Y GNL+ L P G++ I
Sbjct: 100 HKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSY-------------DI 146
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
V E + T++ AR + +L S IHRD+ A +V + N +++DF
Sbjct: 147 NRVPEEQM--TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADF 201
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT 733
GLA+ N + + + G +P ++ P++ F T +SDV+ +GV++ E+ T
Sbjct: 202 GLARDINNI--DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 130/300 (43%), Gaps = 59/300 (19%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIA 575
L +G FG V+ G G VA+K L G T++ + +E + + +++H LV L Y +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQL--YAVV 79
Query: 576 GDQRIAIY-DYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWR 634
++ I I +YM G+L + L G G
Sbjct: 80 SEEPIYIVTEYMNKGSLLDFLK----------------------------GETGKYLRLP 111
Query: 635 FRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEE 694
++ A +A++ +HRD++A+++ + NL +++DFGLA++ + +E
Sbjct: 112 QLVDMSAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIED--NEY 166
Query: 695 IARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNL 750
AR + P ++ P++ T KSDV+ +G++L EL T G+ P YP
Sbjct: 167 TARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP----YP------- 214
Query: 751 VSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKD 810
G+V N + ++ R P + E + C P +RP+ + + L+D
Sbjct: 215 -----GMV-NREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 268
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 122/294 (41%), Gaps = 57/294 (19%)
Query: 516 LAEGKFGPVYRGFLPG-GIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCI 574
L G++G VY G + VAVK L T+ +E +E + IKHPNLV L G C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 575 AGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWR 634
I ++M GNL + L + + Q V + LL
Sbjct: 81 REPPFYIITEFMTYGNLLDYLREC---------------------NRQEVNAVVLLY--- 116
Query: 635 FRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEE 694
+A + A+ +L IHRD+ A + + N +++DFGL+++ D
Sbjct: 117 ----MATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG--DTY 167
Query: 695 IARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNL 750
A + P ++ P+S + + KSDV+ +GV+L E+ T G P YP G
Sbjct: 168 TAPAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP----YP----GID 218
Query: 751 VSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQI 804
+S V L+ + R PE E+ ++ C P RPS +I
Sbjct: 219 LSQVYELLEKD---------YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 263
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 122/294 (41%), Gaps = 57/294 (19%)
Query: 516 LAEGKFGPVYRGFLPG-GIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCI 574
L G++G VY G + VAVK L T+ +E +E + IKHPNLV L G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 575 AGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWR 634
I ++M GNL + L + + Q V + LL
Sbjct: 82 REPPFYIITEFMTYGNLLDYLREC---------------------NRQEVNAVVLLY--- 117
Query: 635 FRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEE 694
+A + A+ +L IHRD+ A + + N +++DFGL+++ D
Sbjct: 118 ----MATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG--DTY 168
Query: 695 IARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNL 750
A + P ++ P+S + + KSDV+ +GV+L E+ T G P YP G
Sbjct: 169 TAPAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP----YP----GID 219
Query: 751 VSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQI 804
+S V L+ + R PE E+ ++ C P RPS +I
Sbjct: 220 LSQVYELLEKD---------YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 99/233 (42%), Gaps = 31/233 (13%)
Query: 516 LAEGKFGPVYRGFL------PGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPL 569
L EG FG V+ + VAVK L + ++ RE E L ++H ++V
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 570 TGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGL 629
G C GD I +++YM++G+L L Q G GL
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLR----------AHGPDAMILVDGQPRQAKGELGL 132
Query: 630 LTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGN 689
+IA G + +L S +HRD+ + + NL ++ DFG+++ +
Sbjct: 133 SQMLHIASQIASG----MVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSR---D 182
Query: 690 GLDEEIAR-GSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT-GKKP 737
+ R G +P + P+S T +SDV+ +GV+L E+ T GK+P
Sbjct: 183 VYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 235
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 98/233 (42%), Gaps = 32/233 (13%)
Query: 516 LAEGKFGPVY----RGFLP--GGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPL 569
L EG FG V+ LP + VAVK L S Q+ RE E L ++H ++V
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 570 TGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGL 629
G C G + +++YM +G+L L + + V S+
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ-- 143
Query: 630 LTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAK-IFG 688
+A G LA LH +HRD+ + + L ++ DFG+++ I+
Sbjct: 144 ---------VAAGMV-YLAGLH------FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYS 187
Query: 689 NGLDEEIARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT-GKKP 737
+ G +P + P+S T +SDV+ +GVVL E+ T GK+P
Sbjct: 188 T---DYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 237
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 98/233 (42%), Gaps = 32/233 (13%)
Query: 516 LAEGKFGPVY----RGFLP--GGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPL 569
L EG FG V+ LP + VAVK L S Q+ RE E L ++H ++V
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 570 TGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGL 629
G C G + +++YM +G+L L + + V S+
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ-- 166
Query: 630 LTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAK-IFG 688
+A G LA LH +HRD+ + + L ++ DFG+++ I+
Sbjct: 167 ---------VAAGMV-YLAGLH------FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYS 210
Query: 689 NGLDEEIARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT-GKKP 737
+ G +P + P+S T +SDV+ +GVVL E+ T GK+P
Sbjct: 211 T---DYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 260
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 105/240 (43%), Gaps = 45/240 (18%)
Query: 508 SNFDRGTLLAEGKFGPVYRG-FLPGG----IHVAVKVLVHGST-LTDQEAARELEYLGRI 561
+ F + +L G FG VY+G ++P G I VA+K L ++ ++E E + +
Sbjct: 12 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 71
Query: 562 KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSI 621
+P++ L G C+ +Q + +P G
Sbjct: 72 DNPHVCRLLGICL-------------TSTVQLITQLMPFGC----------LLDYVREHK 108
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
N+GS+ LL W + A + +L ++HRD+ A +V + +++DF
Sbjct: 109 DNIGSQYLLN-W------CVQIAEGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDF 158
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT-GKKP 737
GLAK+ G E A G G +P ++ +S T +SDV+ YGV + EL+T G KP
Sbjct: 159 GLAKLLGAEEKEYHAEG--GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 216
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 105/240 (43%), Gaps = 45/240 (18%)
Query: 508 SNFDRGTLLAEGKFGPVYRG-FLPGG----IHVAVKVLVHG-STLTDQEAARELEYLGRI 561
+ F + +L G FG VY+G ++P G I VA+K L S ++E E + +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 562 KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSI 621
+P++ L G C+ +Q ++ +P G
Sbjct: 77 DNPHVCRLLGICL-------------TSTVQLIMQLMPFGC----------LLDYVREHK 113
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
N+GS+ LL W + A+ + +L ++HRD+ A +V + +++DF
Sbjct: 114 DNIGSQYLLN-W------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDF 163
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT-GKKP 737
G AK+ G E A G G +P ++ +S T +SDV+ YGV + EL+T G KP
Sbjct: 164 GRAKLLGAEEKEYHAEG--GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 105/240 (43%), Gaps = 45/240 (18%)
Query: 508 SNFDRGTLLAEGKFGPVYRG-FLPGG----IHVAVKVLVHG-STLTDQEAARELEYLGRI 561
+ F + +L G FG VY+G ++P G I VA+K L S ++E E + +
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 562 KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSI 621
+P++ L G C+ +Q ++ +P G
Sbjct: 79 DNPHVCRLLGICL-------------TSTVQLIMQLMPFGC----------LLDYVREHK 115
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
N+GS+ LL W + A+ + +L ++HRD+ A +V + +++DF
Sbjct: 116 DNIGSQYLLN-W------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDF 165
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT-GKKP 737
G AK+ G E A G G +P ++ +S T +SDV+ YGV + EL+T G KP
Sbjct: 166 GRAKLLGAEEKEYHAEG--GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 223
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 98/233 (42%), Gaps = 32/233 (13%)
Query: 516 LAEGKFGPVY----RGFLP--GGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPL 569
L EG FG V+ LP + VAVK L S Q+ RE E L ++H ++V
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 570 TGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGL 629
G C G + +++YM +G+L L + + V S+
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ-- 137
Query: 630 LTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAK-IFG 688
+A G LA LH +HRD+ + + L ++ DFG+++ I+
Sbjct: 138 ---------VAAGMV-YLAGLH------FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYS 181
Query: 689 NGLDEEIARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT-GKKP 737
+ G +P + P+S T +SDV+ +GVVL E+ T GK+P
Sbjct: 182 T---DYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 231
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 106/240 (44%), Gaps = 45/240 (18%)
Query: 508 SNFDRGTLLAEGKFGPVYRG-FLPGG----IHVAVKVLVHGST-LTDQEAARELEYLGRI 561
+ F + +L G FG VY+G ++P G I VA+K L ++ ++E E + +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 562 KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSI 621
+P++ L G C+ +Q ++ +P G
Sbjct: 77 DNPHVCRLLGICL-------------TSTVQLIMQLMPFGC----------LLDYVREHK 113
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
N+GS+ LL W + A+ + +L ++HRD+ A +V + +++DF
Sbjct: 114 DNIGSQYLLN-W------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDF 163
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT-GKKP 737
G AK+ G E A G G +P ++ +S T +SDV+ YGV + EL+T G KP
Sbjct: 164 GRAKLLGAEEKEYHAEG--GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 106/240 (44%), Gaps = 45/240 (18%)
Query: 508 SNFDRGTLLAEGKFGPVYRG-FLPGGIHVAVKVLVH-----GSTLTDQEAARELEYLGRI 561
+ F + +L G FG VY+G ++P G V + V + S ++E E + +
Sbjct: 49 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASV 108
Query: 562 KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSI 621
+P++ L G C+ ++ I M G L + + +
Sbjct: 109 DNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVRE----------------------HK 145
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
N+GS+ LL W + A+ + +L ++HRD+ A +V + +++DF
Sbjct: 146 DNIGSQYLLN-W------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDF 195
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT-GKKP 737
GLAK+ G E A G G +P ++ +S T +SDV+ YGV + EL+T G KP
Sbjct: 196 GLAKLLGAEEKEYHAEG--GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 253
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 135/300 (45%), Gaps = 58/300 (19%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIA 575
L G+FG V+ G+ VAVK L G T++ Q E + ++H LV L
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPG-TMSVQAFLEEANLMKTLQHDKLVRLYAVVTK 78
Query: 576 GDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTW-R 634
+ I ++M G+L + L + G + LL
Sbjct: 79 EEPIYIITEFMAKGSLLDFLKS-------------------------DEGGKVLLPKLID 113
Query: 635 FRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEE 694
F +IA G +A++ IHRD++A++V + +L +++DFGLA++ + +E
Sbjct: 114 FSAQIAEG----MAYIER---KNYIHRDLRAANVLVSESLMCKIADFGLARVIED--NEY 164
Query: 695 IARGSPGYIPPEFAQPDS-DFP--TPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNL 750
AR + P ++ P++ +F T KS+V+ +G++L E++T GK P YP ++
Sbjct: 165 TAREGAKF-PIKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIP----YPGRTNADV 219
Query: 751 VSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKD 810
+S + ++G R P++ + +E I +C + +RP+ + +L D
Sbjct: 220 MSAL------SQGYRM--PRMENCP-----DELYDIMKMCWKEKAEERPTFDYLQSVLDD 266
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 105/259 (40%), Gaps = 50/259 (19%)
Query: 499 TFADLLSATSNFDRGTLLAEGKFGPVY--RGFLPGGIHVAVKVL----VHGSTLTDQEAA 552
T AD N+ + +G F V R L G VAVK++ ++ S+L Q+
Sbjct: 5 TSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGK-EVAVKIIDKTQLNSSSL--QKLF 61
Query: 553 RELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXX 612
RE+ + + HPN+V L + +Y G + + L
Sbjct: 62 REVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL----------------- 104
Query: 613 XXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPP-IIHRDIKASSVYLD 671
+ R + K A R + C I+HRD+KA ++ LD
Sbjct: 105 -----------------VAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLD 147
Query: 672 MNLEPRLSDFGLAK--IFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLL 729
++ +++DFG + FGN LD GSP Y PE Q + P+ DV+ GV+L
Sbjct: 148 ADMNIKIADFGFSNEFTFGNKLDTFC--GSPPYAAPELFQ-GKKYDGPEVDVWSLGVILY 204
Query: 730 ELITGKKPL-GDDYPEEKE 747
L++G P G + E +E
Sbjct: 205 TLVSGSLPFDGQNLKELRE 223
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 105/259 (40%), Gaps = 50/259 (19%)
Query: 499 TFADLLSATSNFDRGTLLAEGKFGPVY--RGFLPGGIHVAVKVL----VHGSTLTDQEAA 552
T AD N+ + +G F V R L G VAVK++ ++ S+L Q+
Sbjct: 5 TSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGK-EVAVKIIDKTQLNSSSL--QKLF 61
Query: 553 RELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXX 612
RE+ + + HPN+V L + +Y G + + L
Sbjct: 62 REVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL----------------- 104
Query: 613 XXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPP-IIHRDIKASSVYLD 671
+ R + K A R + C I+HRD+KA ++ LD
Sbjct: 105 -----------------VAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLD 147
Query: 672 MNLEPRLSDFGLAK--IFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLL 729
++ +++DFG + FGN LD GSP Y PE Q + P+ DV+ GV+L
Sbjct: 148 ADMNIKIADFGFSNEFTFGNKLDTFC--GSPPYAAPELFQ-GKKYDGPEVDVWSLGVILY 204
Query: 730 ELITGKKPL-GDDYPEEKE 747
L++G P G + E +E
Sbjct: 205 TLVSGSLPFDGQNLKELRE 223
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 121/294 (41%), Gaps = 57/294 (19%)
Query: 516 LAEGKFGPVYRGFLPG-GIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCI 574
L G++G VY G + VAVK L T+ +E +E + IKHPNLV L G C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 575 AGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWR 634
I ++M GNL + L + + Q V + LL
Sbjct: 78 REPPFYIITEFMTYGNLLDYLREC---------------------NRQEVSAVVLLY--- 113
Query: 635 FRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEE 694
+A + A+ +L IHRD+ A + + N +++DFGL+++ D
Sbjct: 114 ----MATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG--DTF 164
Query: 695 IARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNL 750
A + P ++ P+S + + KSDV+ +GV+L E+ T G P YP G
Sbjct: 165 TAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP----YP----GID 215
Query: 751 VSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQI 804
S V L+ + R PE E+ ++ C P RPS +I
Sbjct: 216 PSQVYELLEKD---------YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 60.8 bits (146), Expect = 3e-09, Method: Composition-based stats.
Identities = 79/294 (26%), Positives = 122/294 (41%), Gaps = 57/294 (19%)
Query: 516 LAEGKFGPVYRGFLPG-GIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCI 574
L G++G VY G + VAVK L T+ +E +E + IKHPNLV L G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 575 AGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWR 634
I ++M GNL + L + + Q V + LL
Sbjct: 80 REPPFYIITEFMTYGNLLDYLREC---------------------NRQEVNAVVLLY--- 115
Query: 635 FRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEE 694
+A + A+ +L IHRD+ A + + N +++DFGL+++ D
Sbjct: 116 ----MATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG--DTY 166
Query: 695 IARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNL 750
A + P ++ P+S + + KSDV+ +GV+L E+ T G P YP G
Sbjct: 167 TAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP----YP----GID 217
Query: 751 VSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQI 804
+S V L+ + R PE E+ ++ C P RPS +I
Sbjct: 218 LSQVYELLEKD---------YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 129/300 (43%), Gaps = 59/300 (19%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIA 575
L +G FG V+ G G VA+K L G T++ + +E + + +++H LV L Y +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQL--YAVV 82
Query: 576 GDQRIAIY-DYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWR 634
++ I I +YM G L + L G G
Sbjct: 83 SEEPIYIVTEYMSKGCLLDFLK----------------------------GEMGKYLRLP 114
Query: 635 FRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEE 694
+A A +A++ +HRD++A+++ + NL +++DFGLA++ + +E
Sbjct: 115 QLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIED--NEY 169
Query: 695 IARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNL 750
AR + P ++ P++ T KSDV+ +G++L EL T G+ P YP
Sbjct: 170 TARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP----YP------- 217
Query: 751 VSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKD 810
G+V N + ++ R P + E + C P +RP+ + + L+D
Sbjct: 218 -----GMV-NREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 122/294 (41%), Gaps = 57/294 (19%)
Query: 516 LAEGKFGPVYRGFLPG-GIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCI 574
L G++G VY G + VAVK L T+ +E +E + IKHPNLV L G C
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 283
Query: 575 AGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWR 634
I ++M GNL + L + + Q V + LL
Sbjct: 284 REPPFYIITEFMTYGNLLDYLREC---------------------NRQEVNAVVLLY--- 319
Query: 635 FRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEE 694
+A + A+ +L IHR++ A + + N +++DFGL+++ D
Sbjct: 320 ----MATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTG--DTY 370
Query: 695 IARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNL 750
A + P ++ P+S + + KSDV+ +GV+L E+ T G P YP G
Sbjct: 371 TAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP----YP----GID 421
Query: 751 VSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQI 804
+S V L+ + R PE E+ ++ C P RPS +I
Sbjct: 422 LSQVYELLEKD---------YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 466
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 129/300 (43%), Gaps = 59/300 (19%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIA 575
L +G FG V+ G G VA+K L G T++ + +E + + +++H LV L Y +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQL--YAVV 82
Query: 576 GDQRIAI-YDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWR 634
++ I I +YM G L + L G G
Sbjct: 83 SEEPIYIVMEYMSKGCLLDFLK----------------------------GEMGKYLRLP 114
Query: 635 FRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEE 694
+A A +A++ +HRD++A+++ + NL +++DFGLA++ + +E
Sbjct: 115 QLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIED--NEY 169
Query: 695 IARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNL 750
AR + P ++ P++ T KSDV+ +G++L EL T G+ P YP
Sbjct: 170 TARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP----YP------- 217
Query: 751 VSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKD 810
G+V N + ++ R P + E + C P +RP+ + + L+D
Sbjct: 218 -----GMV-NREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 122/294 (41%), Gaps = 57/294 (19%)
Query: 516 LAEGKFGPVYRGFLPG-GIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCI 574
L G++G VY G + VAVK L T+ +E +E + IKHPNLV L G C
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 286
Query: 575 AGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWR 634
I ++M GNL + L + + Q V + LL
Sbjct: 287 REPPFYIITEFMTYGNLLDYLREC---------------------NRQEVSAVVLLY--- 322
Query: 635 FRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEE 694
+A + A+ +L IHR++ A + + N +++DFGL+++ D
Sbjct: 323 ----MATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTG--DTY 373
Query: 695 IARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNL 750
A + P ++ P+S + + KSDV+ +GV+L E+ T G P YP G
Sbjct: 374 TAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP----YP----GID 424
Query: 751 VSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQI 804
+S V L+ + R PE E+ ++ C P RPS +I
Sbjct: 425 LSQVYELLEKD---------YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 469
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 108/256 (42%), Gaps = 41/256 (16%)
Query: 490 IFEKPLLNITFADLLSATSNFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHGSTLTD 548
I EK ++ D + F++ + +G G VY + G VA++ +
Sbjct: 5 ILEKLRSIVSVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK 61
Query: 549 QEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXX 608
+ E+ + K+PN+V + GD+ + +Y+ G+L +++ + +
Sbjct: 62 ELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMD------- 114
Query: 609 XXXXXXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSV 668
I V E L +AL FLH S +IHRDIK+ ++
Sbjct: 115 ---------EGQIAAVCRECL---------------QALEFLH---SNQVIHRDIKSDNI 147
Query: 669 YLDMNLEPRLSDFGL-AKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVV 727
L M+ +L+DFG A+I G+P ++ PE + PK D++ G++
Sbjct: 148 LLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKA--YGPKVDIWSLGIM 205
Query: 728 LLELITGKKPLGDDYP 743
+E+I G+ P ++ P
Sbjct: 206 AIEMIEGEPPYLNENP 221
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 129/300 (43%), Gaps = 59/300 (19%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIA 575
L +G FG V+ G G VA+K L G T++ + +E + + +++H LV L Y +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQL--YAVV 82
Query: 576 GDQRIAIY-DYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWR 634
++ I I +YM G+L + L G G
Sbjct: 83 SEEPIYIVTEYMSKGSLLDFLK----------------------------GEMGKYLRLP 114
Query: 635 FRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEE 694
+A A +A++ +HRD+ A+++ + NL +++DFGLA++ + +E
Sbjct: 115 QLVDMAAQIASGMAYVERM---NYVHRDLAAANILVGENLVCKVADFGLARLIED--NEY 169
Query: 695 IARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNL 750
AR + P ++ P++ T KSDV+ +G++L EL T G+ P YP
Sbjct: 170 TARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP----YP------- 217
Query: 751 VSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKD 810
G+V N + ++ R P + E + C P +RP+ + + L+D
Sbjct: 218 -----GMV-NREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 122/294 (41%), Gaps = 57/294 (19%)
Query: 516 LAEGKFGPVYRGFLPG-GIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCI 574
L G++G VY G + VAVK L T+ +E +E + IKHPNLV L G C
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 325
Query: 575 AGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWR 634
I ++M GNL + L + + Q V + LL
Sbjct: 326 REPPFYIITEFMTYGNLLDYLREC---------------------NRQEVNAVVLLY--- 361
Query: 635 FRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEE 694
+A + A+ +L IHR++ A + + N +++DFGL+++ D
Sbjct: 362 ----MATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTG--DTY 412
Query: 695 IARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNL 750
A + P ++ P+S + + KSDV+ +GV+L E+ T G P YP G
Sbjct: 413 TAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP----YP----GID 463
Query: 751 VSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQI 804
+S V L+ + R PE E+ ++ C P RPS +I
Sbjct: 464 LSQVYELLEKD---------YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 508
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 109/256 (42%), Gaps = 41/256 (16%)
Query: 490 IFEKPLLNITFADLLSATSNFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHGSTLTD 548
I EK + ++ D + F++ + +G G VY + G VA++ +
Sbjct: 6 ILEKLRIIVSVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK 62
Query: 549 QEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXX 608
+ E+ + K+PN+V + GD+ + +Y+ G+L +++ + +
Sbjct: 63 ELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMD------- 115
Query: 609 XXXXXXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSV 668
I V E L +AL FLH S +IHR+IK+ ++
Sbjct: 116 ---------EGQIAAVCRECL---------------QALEFLH---SNQVIHRNIKSDNI 148
Query: 669 YLDMNLEPRLSDFGL-AKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVV 727
L M+ +L+DFG A+I G+P ++ PE + PK D++ G++
Sbjct: 149 LLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAY--GPKVDIWSLGIM 206
Query: 728 LLELITGKKPLGDDYP 743
+E+I G+ P ++ P
Sbjct: 207 AIEMIEGEPPYLNENP 222
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 129/300 (43%), Gaps = 59/300 (19%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIA 575
L +G FG V+ G G VA+K L G+ ++ + +E + + +++H LV L Y +
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGN-MSPEAFLQEAQVMKKLRHEKLVQL--YAVV 249
Query: 576 GDQRIAIY-DYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWR 634
++ I I +YM G+L + L G G
Sbjct: 250 SEEPIYIVTEYMSKGSLLDFLK----------------------------GEMGKYLRLP 281
Query: 635 FRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEE 694
+A A +A++ +HRD++A+++ + NL +++DFGL ++ + +E
Sbjct: 282 QLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLGRLIED--NEY 336
Query: 695 IARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNL 750
AR + P ++ P++ T KSDV+ +G++L EL T G+ P YP
Sbjct: 337 TARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP----YP------- 384
Query: 751 VSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKD 810
G+V N + ++ R P + E + C P +RP+ + + L+D
Sbjct: 385 -----GMV-NREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLED 438
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 108/256 (42%), Gaps = 41/256 (16%)
Query: 490 IFEKPLLNITFADLLSATSNFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHGSTLTD 548
I EK ++ D + F++ + +G G VY + G VA++ +
Sbjct: 6 ILEKLRSIVSVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK 62
Query: 549 QEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXX 608
+ E+ + K+PN+V + GD+ + +Y+ G+L +++ + +
Sbjct: 63 ELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMD------- 115
Query: 609 XXXXXXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSV 668
I V E L +AL FLH S +IHRDIK+ ++
Sbjct: 116 ---------EGQIAAVCRECL---------------QALEFLH---SNQVIHRDIKSDNI 148
Query: 669 YLDMNLEPRLSDFGL-AKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVV 727
L M+ +L+DFG A+I G+P ++ PE + PK D++ G++
Sbjct: 149 LLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKA--YGPKVDIWSLGIM 206
Query: 728 LLELITGKKPLGDDYP 743
+E+I G+ P ++ P
Sbjct: 207 AIEMIEGEPPYLNENP 222
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 108/256 (42%), Gaps = 41/256 (16%)
Query: 490 IFEKPLLNITFADLLSATSNFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHGSTLTD 548
I EK ++ D + F++ + +G G VY + G VA++ +
Sbjct: 5 ILEKLRSIVSVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK 61
Query: 549 QEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXX 608
+ E+ + K+PN+V + GD+ + +Y+ G+L +++ + +
Sbjct: 62 ELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMD------- 114
Query: 609 XXXXXXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSV 668
I V E L +AL FLH S +IHRDIK+ ++
Sbjct: 115 ---------EGQIAAVCRECL---------------QALEFLH---SNQVIHRDIKSDNI 147
Query: 669 YLDMNLEPRLSDFGL-AKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVV 727
L M+ +L+DFG A+I G+P ++ PE + PK D++ G++
Sbjct: 148 LLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKA--YGPKVDIWSLGIM 205
Query: 728 LLELITGKKPLGDDYP 743
+E+I G+ P ++ P
Sbjct: 206 AIEMIEGEPPYLNENP 221
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 62/123 (50%), Gaps = 7/123 (5%)
Query: 629 LLTTWRFRHKIALGTARALAFLHHGCSPP-IIHRDIKASSVYLDMNLEPRLSDFGLAK-- 685
L+ R + K A R + C I+HRD+KA ++ LD ++ +++DFG +
Sbjct: 104 LVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEF 163
Query: 686 IFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL-GDDYPE 744
FGN LD GSP Y PE Q + P+ DV+ GV+L L++G P G + E
Sbjct: 164 TFGNKLDTFC--GSPPYAAPELFQ-GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE 220
Query: 745 EKE 747
+E
Sbjct: 221 LRE 223
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 120/275 (43%), Gaps = 57/275 (20%)
Query: 508 SNFDRGTLLAEGKFGPVYRG-FLPGG----IHVAVKVLVHGS-TLTDQEAARELEYLGRI 561
+ R +L G FG VY+G ++P G I VA+K+L + + E E + +
Sbjct: 38 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASM 97
Query: 562 KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSI 621
HP+LV L G C++ ++ + M +G L +H+
Sbjct: 98 DHPHLVRLLGVCLSPTIQL-VTQLMPHGCLLEYVHE----------------------HK 134
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
N+GS+ LL W + A+ + +L ++HRD+ A +V + +++DF
Sbjct: 135 DNIGSQ-LLLNW------CVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDF 184
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDS----DFPTPKSDVYCYGVVLLELIT-GKK 736
GLA++ DE+ G +P ++ + F T +SDV+ YGV + EL+T G K
Sbjct: 185 GLARLLEG--DEKEYNADGGKMPIKWMALECIHYRKF-THQSDVWSYGVTIWELMTFGGK 241
Query: 737 PLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKI 771
P D P + +L+ KG R P I
Sbjct: 242 PY-DGIPTREIPDLL---------EKGERLPQPPI 266
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 131/314 (41%), Gaps = 52/314 (16%)
Query: 513 GTLLAEGKFGPVYRGFLPG--------GIHVAVKVLVHGSTLTD-QEAARELEYLGRI-K 562
G L EG FG V G VAVK+L +T D + E+E + I K
Sbjct: 33 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 563 HPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLH-DLPLGVQXXXXXXXXXXXXXXXNSI 621
H N++ L G C I +Y GNL+ L P G++ N
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLE--------FSFNPSHNPE 144
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
+ + S+ L++ A AR + +L S IHRD+ A +V + + +++DF
Sbjct: 145 EQLSSKDLVSC-------AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADF 194
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT-GKKP 737
GLA+ + + + + G +P ++ P++ F T +SDV+ +GV+L E+ T G P
Sbjct: 195 GLARDIHHI--DXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 252
Query: 738 LGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLK 797
YP L ++ R +K S + E + C +P +
Sbjct: 253 ----YPGVPVEELFKLLKEGHRMDKPSNCTN-------------ELYMMMRDCWHAVPSQ 295
Query: 798 RPSMQQIVGLLKDI 811
RP+ +Q+V L I
Sbjct: 296 RPTFKQLVEDLDRI 309
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 66/125 (52%), Gaps = 10/125 (8%)
Query: 624 VGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGL 683
V +EG +T R IA +AL F H IIHRD+K +++ + ++ DFG+
Sbjct: 107 VHTEGPMTPKRAIEVIA-DACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGI 162
Query: 684 AKIF---GNGLDEEIAR-GSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLG 739
A+ GN + + A G+ Y+ PE A+ DS +SDVY G VL E++TG+ P
Sbjct: 163 ARAIADSGNSVTQTAAVIGTAQYLSPEQARGDS--VDARSDVYSLGCVLYEVLTGEPPFT 220
Query: 740 DDYPE 744
D P+
Sbjct: 221 GDSPD 225
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 109/241 (45%), Gaps = 47/241 (19%)
Query: 508 SNFDRGTLLAEGKFGPVYRG-FLPGG----IHVAVKVLVHGS-TLTDQEAARELEYLGRI 561
+ R +L G FG VY+G ++P G I VA+K+L + + E E + +
Sbjct: 15 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASM 74
Query: 562 KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSI 621
HP+LV L G C++ ++ + M +G L +H+
Sbjct: 75 DHPHLVRLLGVCLSPTIQL-VTQLMPHGCLLEYVHE----------------------HK 111
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
N+GS+ LL W + A+ + +L ++HRD+ A +V + +++DF
Sbjct: 112 DNIGSQ-LLLNW------CVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDF 161
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDS----DFPTPKSDVYCYGVVLLELIT-GKK 736
GLA++ DE+ G +P ++ + F T +SDV+ YGV + EL+T G K
Sbjct: 162 GLARLLEG--DEKEYNADGGKMPIKWMALECIHYRKF-THQSDVWSYGVTIWELMTFGGK 218
Query: 737 P 737
P
Sbjct: 219 P 219
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 104/240 (43%), Gaps = 45/240 (18%)
Query: 508 SNFDRGTLLAEGKFGPVYRG-FLPGG----IHVAVKVLVHG-STLTDQEAARELEYLGRI 561
+ F + +L G FG VY+G ++P G I VA+K L S ++E E + +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 562 KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSI 621
+P++ L G C+ +Q + +P G
Sbjct: 77 DNPHVCRLLGICL-------------TSTVQLITQLMPFGC----------LLDYVREHK 113
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
N+GS+ LL W + A+ + +L ++HRD+ A +V + +++DF
Sbjct: 114 DNIGSQYLLN-W------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDF 163
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT-GKKP 737
G AK+ G E A G G +P ++ +S T +SDV+ YGV + EL+T G KP
Sbjct: 164 GRAKLLGAEEKEYHAEG--GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 140/344 (40%), Gaps = 65/344 (18%)
Query: 497 NITFADLLSATSNF------------DR---GTLLAEGKFGPVYRGFLPG--------GI 533
N+ F +L+ S + DR G L EG FG V G
Sbjct: 43 NLYFQGMLAGVSEYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVT 102
Query: 534 HVAVKVLVHGSTLTD-QEAARELEYLGRI-KHPNLVPLTGYCIAGDQRIAIYDYMENGNL 591
VAVK+L +T D + E+E + I KH N++ L G C I +Y GNL
Sbjct: 103 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 162
Query: 592 QNLLH-DLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFL 650
+ L P G++ N + + S+ L++ A AR + +L
Sbjct: 163 REYLQARRPPGLE--------YSYNPSHNPEEQLSSKDLVSC-------AYQVARGMEYL 207
Query: 651 HHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQP 710
S IHRD+ A +V + + +++DFGLA+ + + + + G +P ++ P
Sbjct: 208 ---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHH--IDYYKKTTNGRLPVKWMAP 262
Query: 711 DSDFP---TPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAI 767
++ F T +SDV+ +GV+L E+ T G YP L ++ R +K S
Sbjct: 263 EALFDRIYTHQSDVWSFGVLLWEIFTLG---GSPYPGVPVEELFKLLKEGHRMDKPSNCT 319
Query: 768 DPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDI 811
+ E + C +P +RP+ +Q+V L I
Sbjct: 320 N-------------ELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 350
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 105/259 (40%), Gaps = 50/259 (19%)
Query: 499 TFADLLSATSNFDRGTLLAEGKFGPVY--RGFLPGGIHVAVKVL----VHGSTLTDQEAA 552
T AD N+ + +G F V R L G VAVK++ ++ S+L Q+
Sbjct: 5 TSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGK-EVAVKIIDKTQLNSSSL--QKLF 61
Query: 553 RELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXX 612
RE+ + + HPN+V L + +Y G + + L
Sbjct: 62 REVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL----------------- 104
Query: 613 XXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPP-IIHRDIKASSVYLD 671
+ R + K A R + C I+HRD+KA ++ LD
Sbjct: 105 -----------------VAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLD 147
Query: 672 MNLEPRLSDFGLAK--IFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLL 729
++ +++DFG + FGN LD G+P Y PE Q + P+ DV+ GV+L
Sbjct: 148 ADMNIKIADFGFSNEFTFGNKLDAFC--GAPPYAAPELFQ-GKKYDGPEVDVWSLGVILY 204
Query: 730 ELITGKKPL-GDDYPEEKE 747
L++G P G + E +E
Sbjct: 205 TLVSGSLPFDGQNLKELRE 223
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 124/293 (42%), Gaps = 57/293 (19%)
Query: 516 LAEGKFGPVYRGFLPG-GIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCI 574
L G++G VY G + VAVK L T+ +E +E + IKHPNLV L G C
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 98
Query: 575 AGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWR 634
+ +YM GNL + L + + + V + LL
Sbjct: 99 LEPPFYIVTEYMPYGNLLDYLREC---------------------NREEVTAVVLLY--- 134
Query: 635 FRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEE 694
+A + A+ +L IHRD+ A + + N +++DFGL+++ D
Sbjct: 135 ----MATQISSAMEYLE---KKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTG--DTY 185
Query: 695 IARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNL 750
A + P ++ P+S + + KSDV+ +GV+L E+ T G P YP G
Sbjct: 186 TAHAGAKF-PIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSP----YP----GID 236
Query: 751 VSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQ 803
+S V L+ KG R P+ G ++ E ++ C P RPS +
Sbjct: 237 LSQVYDLL--EKGYRMEQPE----GCPPKVYELMRA---CWKWSPADRPSFAE 280
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 105/240 (43%), Gaps = 45/240 (18%)
Query: 508 SNFDRGTLLAEGKFGPVYRG-FLPGG----IHVAVKVLVHGST-LTDQEAARELEYLGRI 561
+ F + +L G FG VY+G ++P G I VA+K L ++ ++E E + +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 562 KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSI 621
+P++ L G C+ +Q + +P G
Sbjct: 75 DNPHVCRLLGICL-------------TSTVQLITQLMPFGC----------LLDYVREHK 111
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
N+GS+ LL W + A+ + +L ++HRD+ A +V + +++DF
Sbjct: 112 DNIGSQYLLN-W------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDF 161
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT-GKKP 737
G AK+ G E A G G +P ++ +S T +SDV+ YGV + EL+T G KP
Sbjct: 162 GRAKLLGAEEKEYHAEG--GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 105/240 (43%), Gaps = 45/240 (18%)
Query: 508 SNFDRGTLLAEGKFGPVYRG-FLPGG----IHVAVKVLVHGST-LTDQEAARELEYLGRI 561
+ F + +L G FG VY+G ++P G I VA+K L ++ ++E E + +
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 562 KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSI 621
+P++ L G C+ +Q + +P G
Sbjct: 82 DNPHVCRLLGICL-------------TSTVQLITQLMPFGC----------LLDYVREHK 118
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
N+GS+ LL W + A+ + +L ++HRD+ A +V + +++DF
Sbjct: 119 DNIGSQYLLN-W------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDF 168
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT-GKKP 737
G AK+ G E A G G +P ++ +S T +SDV+ YGV + EL+T G KP
Sbjct: 169 GRAKLLGAEEKEYHAEG--GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 108/256 (42%), Gaps = 41/256 (16%)
Query: 490 IFEKPLLNITFADLLSATSNFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHGSTLTD 548
I EK ++ D + F++ + +G G VY + G VA++ +
Sbjct: 5 ILEKLRSIVSVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK 61
Query: 549 QEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXX 608
+ E+ + K+PN+V + GD+ + +Y+ G+L +++ + +
Sbjct: 62 ELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMD------- 114
Query: 609 XXXXXXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSV 668
I V E L +AL FLH S +IHRDIK+ ++
Sbjct: 115 ---------EGQIAAVCRECL---------------QALEFLH---SNQVIHRDIKSDNI 147
Query: 669 YLDMNLEPRLSDFGL-AKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVV 727
L M+ +L+DFG A+I G+P ++ PE + PK D++ G++
Sbjct: 148 LLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKA--YGPKVDIWSLGIM 205
Query: 728 LLELITGKKPLGDDYP 743
+E+I G+ P ++ P
Sbjct: 206 AIEMIEGEPPYLNENP 221
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 130/313 (41%), Gaps = 50/313 (15%)
Query: 513 GTLLAEGKFGPVYRGFLPG--------GIHVAVKVLVHGSTLTD-QEAARELEYLGRI-K 562
G L EG FG V G VAVK+L +T D + E+E + I K
Sbjct: 22 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 81
Query: 563 HPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLH-DLPLGVQXXXXXXXXXXXXXXXNSI 621
H N++ L G C I +Y GNL+ L P G++ N
Sbjct: 82 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLE--------YSYNPSHNPE 133
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
+ + S+ L++ A AR + +L S IHRD+ A +V + + +++DF
Sbjct: 134 EQLSSKDLVSC-------AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADF 183
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELITGKKPL 738
GLA+ + + + + G +P ++ P++ F T +SDV+ +GV+L E+ T
Sbjct: 184 GLARDIHHI--DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG--- 238
Query: 739 GDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKR 798
G YP L ++ R +K S + E + C +P +R
Sbjct: 239 GSPYPGVPVEELFKLLKEGHRMDKPSNCTN-------------ELYMMMRDCWHAVPSQR 285
Query: 799 PSMQQIVGLLKDI 811
P+ +Q+V L I
Sbjct: 286 PTFKQLVEDLDRI 298
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 65/124 (52%), Gaps = 10/124 (8%)
Query: 624 VGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGL 683
V +EG +T R IA +AL F H IIHRD+K +++ + ++ DFG+
Sbjct: 107 VHTEGPMTPKRAIEVIA-DACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGI 162
Query: 684 AKIF---GNGLDEEIAR-GSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLG 739
A+ GN + + A G+ Y+ PE A+ DS +SDVY G VL E++TG+ P
Sbjct: 163 ARAIADSGNSVTQTAAVIGTAQYLSPEQARGDS--VDARSDVYSLGCVLYEVLTGEPPFT 220
Query: 740 DDYP 743
D P
Sbjct: 221 GDSP 224
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 130/313 (41%), Gaps = 50/313 (15%)
Query: 513 GTLLAEGKFGPVYRGFLPG--------GIHVAVKVLVHGSTLTD-QEAARELEYLGRI-K 562
G L EG FG V G VAVK+L +T D + E+E + I K
Sbjct: 26 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 85
Query: 563 HPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLH-DLPLGVQXXXXXXXXXXXXXXXNSI 621
H N++ L G C I +Y GNL+ L P G++ N
Sbjct: 86 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLE--------YSYNPSHNPE 137
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
+ + S+ L++ A AR + +L S IHRD+ A +V + + +++DF
Sbjct: 138 EQLSSKDLVSC-------AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADF 187
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELITGKKPL 738
GLA+ + + + + G +P ++ P++ F T +SDV+ +GV+L E+ T
Sbjct: 188 GLARDIHHI--DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG--- 242
Query: 739 GDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKR 798
G YP L ++ R +K S + E + C +P +R
Sbjct: 243 GSPYPGVPVEELFKLLKEGHRMDKPSNCTN-------------ELYMMMRDCWHAVPSQR 289
Query: 799 PSMQQIVGLLKDI 811
P+ +Q+V L I
Sbjct: 290 PTFKQLVEDLDRI 302
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 131/314 (41%), Gaps = 52/314 (16%)
Query: 513 GTLLAEGKFGPVYRGFLPG--------GIHVAVKVLVHGSTLTD-QEAARELEYLGRI-K 562
G L EG FG V G VAVK+L +T D + E+E + I K
Sbjct: 25 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 84
Query: 563 HPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLH-DLPLGVQXXXXXXXXXXXXXXXNSI 621
H N++ L G C I +Y GNL+ L P G++ N
Sbjct: 85 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLE--------YSYNPSHNPE 136
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
+ + S+ L++ A AR + +L S IHRD+ A +V + + +++DF
Sbjct: 137 EQLSSKDLVSC-------AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADF 186
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT-GKKP 737
GLA+ + + + + G +P ++ P++ F T +SDV+ +GV+L E+ T G P
Sbjct: 187 GLARDIHH--IDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 244
Query: 738 LGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLK 797
YP L ++ R +K S + E + C +P +
Sbjct: 245 ----YPGVPVEELFKLLKEGHRMDKPSNCTN-------------ELYMMMRDCWHAVPSQ 287
Query: 798 RPSMQQIVGLLKDI 811
RP+ +Q+V L I
Sbjct: 288 RPTFKQLVEDLDRI 301
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 65/124 (52%), Gaps = 10/124 (8%)
Query: 624 VGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGL 683
V +EG +T R IA +AL F H IIHRD+K +++ + ++ DFG+
Sbjct: 107 VHTEGPMTPKRAIEVIA-DACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGI 162
Query: 684 AKIF---GNGLDEEIAR-GSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLG 739
A+ GN + + A G+ Y+ PE A+ DS +SDVY G VL E++TG+ P
Sbjct: 163 ARAIADSGNSVTQTAAVIGTAQYLSPEQARGDS--VDARSDVYSLGCVLYEVLTGEPPFT 220
Query: 740 DDYP 743
D P
Sbjct: 221 GDSP 224
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 130/313 (41%), Gaps = 50/313 (15%)
Query: 513 GTLLAEGKFGPVYRGFLPG--------GIHVAVKVLVHGSTLTD-QEAARELEYLGRI-K 562
G L EG FG V G VAVK+L +T D + E+E + I K
Sbjct: 33 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 563 HPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLH-DLPLGVQXXXXXXXXXXXXXXXNSI 621
H N++ L G C I +Y GNL+ L P G++ N
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLE--------YSYNPSHNPE 144
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
+ + S+ L++ A AR + +L S IHRD+ A +V + + +++DF
Sbjct: 145 EQLSSKDLVSC-------AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADF 194
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELITGKKPL 738
GLA+ + + + + G +P ++ P++ F T +SDV+ +GV+L E+ T
Sbjct: 195 GLARDIHH--IDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG--- 249
Query: 739 GDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKR 798
G YP L ++ R +K S + E + C +P +R
Sbjct: 250 GSPYPGVPVEELFKLLKEGHRMDKPSNCTN-------------ELYMMMRDCWHAVPSQR 296
Query: 799 PSMQQIVGLLKDI 811
P+ +Q+V L I
Sbjct: 297 PTFKQLVEDLDRI 309
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 108/269 (40%), Gaps = 56/269 (20%)
Query: 493 KPLLNITFADLLSATSNFDRGTLLAEGKFGPVYRG-FLPGGIHVAVKVL-VHGSTLTDQE 550
+ L I + L F+ L+ G +G VY+G + G A+KV+ V G ++E
Sbjct: 9 RSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE--EEE 66
Query: 551 AARELEYLGRI-KHPNLVPLTGYCIA------GDQRIAIYDYMENGNLQNLLHDLPLGVQ 603
+E+ L + H N+ G I DQ + ++ G++ +L
Sbjct: 67 IKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDL--------- 117
Query: 604 XXXXXXXXXXXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDI 663
I+N L W IA L L H +IHRDI
Sbjct: 118 -----------------IKNTKGNTLKEEW-----IAYICREILRGLSHLHQHKVIHRDI 155
Query: 664 KASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIAR-----GSPGYIPPEF----AQPDSDF 714
K +V L N E +L DFG++ LD + R G+P ++ PE PD+ +
Sbjct: 156 KGQNVLLTENAEVKLVDFGVSA----QLDRTVGRRNTFIGTPYWMAPEVIACDENPDATY 211
Query: 715 PTPKSDVYCYGVVLLELITGKKPLGDDYP 743
KSD++ G+ +E+ G PL D +P
Sbjct: 212 DF-KSDLWSLGITAIEMAEGAPPLCDMHP 239
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 137/332 (41%), Gaps = 62/332 (18%)
Query: 496 LNITFADLLSATSNFDRGTLLAEGKFGPVYRGFLP----GGIHVAVKVLVHGSTLTD--Q 549
L D+L F G +L +G+FG V L + VAVK+L + +
Sbjct: 11 LKEKLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIE 70
Query: 550 EAARELEYLGRIKHPNLVPLTGYCIAGDQR------IAIYDYMENGNLQNLLHDLPLGVQ 603
E RE + HP++ L G + + + I +M++G+L L +G
Sbjct: 71 EFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIG-- 128
Query: 604 XXXXXXXXXXXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDI 663
+N + L T RF IA G + + S IHRD+
Sbjct: 129 ------------------ENPFNLPLQTLVRFMVDIACG-------MEYLSSRNFIHRDL 163
Query: 664 KASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDS---DFPTPKSD 720
A + L ++ ++DFGL++ +G + +G +P ++ +S + T SD
Sbjct: 164 AARNCMLAEDMTVCVADFGLSRKIYSG--DYYRQGCASKLPVKWLALESLADNLYTVHSD 221
Query: 721 VYCYGVVLLELIT-GKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQ 779
V+ +GV + E++T G+ P Y + + +++ G G+R P PE
Sbjct: 222 VWAFGVTMWEIMTRGQTP----YAGIENAEIYNYLIG------GNRLKQP------PE-C 264
Query: 780 MEEALKIGYLCTADLPLKRPSMQQIVGLLKDI 811
MEE + Y C + P +RPS + L++I
Sbjct: 265 MEEVYDLMYQCWSADPKQRPSFTCLRMELENI 296
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 96/232 (41%), Gaps = 41/232 (17%)
Query: 516 LAEGKFGPV-----YRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLT 570
L EG FG V Y+ + + L+ S + RE+ YL ++HP+++ L
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDM-HMRVEREISYLKLLRHPHIIKLY 75
Query: 571 GYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLL 630
+ + +Y G L + + + EG
Sbjct: 76 DVITTPTDIVMVIEYA-GGELFDYI----------------------VEKKRMTEDEG-- 110
Query: 631 TTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNG 690
RF +I A+ + H I+HRD+K ++ LD NL +++DFGL+ I +G
Sbjct: 111 --RRFFQQIIC----AIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG 161
Query: 691 LDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDY 742
+ + GSP Y PE + P+ DV+ G+VL ++ G+ P D++
Sbjct: 162 NFLKTSCGSPNYAAPEVINGKL-YAGPEVDVWSCGIVLYVMLVGRLPFDDEF 212
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 65/124 (52%), Gaps = 10/124 (8%)
Query: 624 VGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGL 683
V +EG +T R IA +AL F H IIHRD+K +++ + ++ DFG+
Sbjct: 107 VHTEGPMTPKRAIEVIA-DACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGI 162
Query: 684 AKIF---GNGLDEEIAR-GSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLG 739
A+ GN + + A G+ Y+ PE A+ DS +SDVY G VL E++TG+ P
Sbjct: 163 ARAIADSGNSVTQTAAVIGTAQYLSPEQARGDS--VDARSDVYSLGCVLYEVLTGEPPFT 220
Query: 740 DDYP 743
D P
Sbjct: 221 GDSP 224
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 65/124 (52%), Gaps = 10/124 (8%)
Query: 624 VGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGL 683
V +EG +T R IA +AL F H IIHRD+K +++ + ++ DFG+
Sbjct: 124 VHTEGPMTPKRAIEVIA-DACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGI 179
Query: 684 AKIF---GNGLDEEIAR-GSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLG 739
A+ GN + + A G+ Y+ PE A+ DS +SDVY G VL E++TG+ P
Sbjct: 180 ARAIADSGNSVTQTAAVIGTAQYLSPEQARGDS--VDARSDVYSLGCVLYEVLTGEPPFT 237
Query: 740 DDYP 743
D P
Sbjct: 238 GDSP 241
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 131/314 (41%), Gaps = 52/314 (16%)
Query: 513 GTLLAEGKFGPVYRGFLPG--------GIHVAVKVLVHGSTLTD-QEAARELEYLGRI-K 562
G L EG FG V G VAVK+L +T D + E+E + I K
Sbjct: 33 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 563 HPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDL-PLGVQXXXXXXXXXXXXXXXNSI 621
H N++ L G C I +Y GNL+ L P G++ N
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLE--------YSYNPSHNPE 144
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
+ + S+ L++ A AR + +L S IHRD+ A +V + + +++DF
Sbjct: 145 EQLSSKDLVSC-------AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADF 194
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT-GKKP 737
GLA+ + + + + G +P ++ P++ F T +SDV+ +GV+L E+ T G P
Sbjct: 195 GLARDIHH--IDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 252
Query: 738 LGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLK 797
YP L ++ R +K S + E + C +P +
Sbjct: 253 ----YPGVPVEELFKLLKEGHRMDKPSNCTN-------------ELYMMMRDCWHAVPSQ 295
Query: 798 RPSMQQIVGLLKDI 811
RP+ +Q+V L I
Sbjct: 296 RPTFKQLVEDLDRI 309
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 130/313 (41%), Gaps = 50/313 (15%)
Query: 513 GTLLAEGKFGPVYRGFLPG--------GIHVAVKVLVHGSTLTD-QEAARELEYLGRI-K 562
G L EG FG V G VAVK+L +T D + E+E + I K
Sbjct: 18 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 77
Query: 563 HPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLH-DLPLGVQXXXXXXXXXXXXXXXNSI 621
H N++ L G C I +Y GNL+ L P G++ N
Sbjct: 78 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLE--------YCYNPSHNPE 129
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
+ + S+ L++ A AR + +L S IHRD+ A +V + + +++DF
Sbjct: 130 EQLSSKDLVSC-------AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADF 179
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELITGKKPL 738
GLA+ + + + + G +P ++ P++ F T +SDV+ +GV+L E+ T
Sbjct: 180 GLARDIHHI--DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG--- 234
Query: 739 GDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKR 798
G YP L ++ R +K S + E + C +P +R
Sbjct: 235 GSPYPGVPVEELFKLLKEGHRMDKPSNCTN-------------ELYMMMRDCWHAVPSQR 281
Query: 799 PSMQQIVGLLKDI 811
P+ +Q+V L I
Sbjct: 282 PTFKQLVEDLDRI 294
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 65/124 (52%), Gaps = 10/124 (8%)
Query: 624 VGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGL 683
V +EG +T R IA +AL F H IIHRD+K +++ + ++ DFG+
Sbjct: 107 VHTEGPMTPKRAIEVIA-DACQALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGI 162
Query: 684 AKIF---GNGLDEEIAR-GSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLG 739
A+ GN + + A G+ Y+ PE A+ DS +SDVY G VL E++TG+ P
Sbjct: 163 ARAIADSGNSVXQTAAVIGTAQYLSPEQARGDS--VDARSDVYSLGCVLYEVLTGEPPFT 220
Query: 740 DDYP 743
D P
Sbjct: 221 GDSP 224
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 140/319 (43%), Gaps = 61/319 (19%)
Query: 506 ATSNFDRGTLLAEGKFGPVYRGFLPGGIHV-AVKVLVHGSTLTD-------QEAARELEY 557
A + + + +G FG V++G L V A+K L+ G + + QE RE+
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 558 LGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXX 617
+ + HPN+V L Y + + + +++ G+L + L D ++
Sbjct: 77 MSNLNHPNIVKL--YGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIK-------------- 120
Query: 618 XNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYL---DMN- 673
W + ++ L A + ++ + +PPI+HRD+++ +++L D N
Sbjct: 121 ---------------WSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENA 164
Query: 674 -LEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELI 732
+ +++DFGL++ + + + G+ ++ PE + + T K+D Y + ++L ++
Sbjct: 165 PVCAKVADFGLSQQSVHSVSGLL--GNFQWMAPETIGAEEESYTEKADTYSFAMILYTIL 222
Query: 733 TGKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTA 792
TG+ P D+Y K ++ +R + +R T PE + LC +
Sbjct: 223 TGEGPF-DEYSYGK-IKFINMIR------------EEGLRPTIPEDCPPRLRNVIELCWS 268
Query: 793 DLPLKRPSMQQIVGLLKDI 811
P KRP IV L ++
Sbjct: 269 GDPKKRPHFSYIVKELSEL 287
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 131/314 (41%), Gaps = 52/314 (16%)
Query: 513 GTLLAEGKFGPVYRGFLPG--------GIHVAVKVLVHGSTLTD-QEAARELEYLGRI-K 562
G L EG FG V G VAVK+L +T D + E+E + I K
Sbjct: 33 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 563 HPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLH-DLPLGVQXXXXXXXXXXXXXXXNSI 621
H N++ L G C I +Y GNL+ L P G++ N
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLE--------YCYNPSHNPE 144
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
+ + S+ L++ A AR + +L S IHRD+ A +V + + +++DF
Sbjct: 145 EQLSSKDLVSC-------AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADF 194
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT-GKKP 737
GLA+ + + + + G +P ++ P++ F T +SDV+ +GV+L E+ T G P
Sbjct: 195 GLARDIHHI--DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 252
Query: 738 LGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLK 797
YP L ++ R +K S + E + C +P +
Sbjct: 253 ----YPGVPVEELFKLLKEGHRMDKPSNCTN-------------ELYMMMRDCWHAVPSQ 295
Query: 798 RPSMQQIVGLLKDI 811
RP+ +Q+V L I
Sbjct: 296 RPTFKQLVEDLDRI 309
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 3/121 (2%)
Query: 629 LLTTWRFRHKIALGTARALAFLHHGC-SPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIF 687
L+ R + K A R + C I+HRD+KA ++ LD ++ +++DFG + F
Sbjct: 102 LVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEF 161
Query: 688 GNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL-GDDYPEEK 746
G + GSP Y PE Q + P+ DV+ GV+L L++G P G + E +
Sbjct: 162 TVGGKLDTFCGSPPYAAPELFQ-GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELR 220
Query: 747 E 747
E
Sbjct: 221 E 221
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 126/301 (41%), Gaps = 69/301 (22%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIA 575
L G+FG V+ VAVK + GS + A E + ++H LV L +
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLA-EANVMKTLQHDKLVKLHA-VVT 247
Query: 576 GDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTW-R 634
+ I ++M G+L + L + GS+ L
Sbjct: 248 KEPIYIITEFMAKGSLLDFLKS-------------------------DEGSKQPLPKLID 282
Query: 635 FRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEE 694
F +IA G +AF+ IHRD++A+++ + +L +++DFGLA++
Sbjct: 283 FSAQIAEG----MAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVGAK----- 330
Query: 695 IARGSPGYIPPEFAQPDS-DFP--TPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNL 750
P ++ P++ +F T KSDV+ +G++L+E++T G+ P YP
Sbjct: 331 --------FPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIP----YPG------ 372
Query: 751 VSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKD 810
+ N + RA++ R PE EE I C + P +RP+ + I +L D
Sbjct: 373 -------MSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 425
Query: 811 I 811
Sbjct: 426 F 426
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 125/304 (41%), Gaps = 63/304 (20%)
Query: 513 GTLLAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELE-------YLGRIKHPN 565
G +L EG+FG V G L ++KV V L D + RE+E + HPN
Sbjct: 39 GKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKL-DNSSQREIEEFLSEAACMKDFSHPN 97
Query: 566 LVPLTGYCIAGDQR-----IAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNS 620
++ L G CI + + I +M+ G+L L
Sbjct: 98 VIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYL-----------------LYSRLETG 140
Query: 621 IQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSD 680
+++ + LL +F IALG + + + +HRD+ A + L ++ ++D
Sbjct: 141 PKHIPLQTLL---KFMVDIALG-------MEYLSNRNFLHRDLAARNCMLRDDMTVCVAD 190
Query: 681 FGLAKIFGNGLDEEIARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT-GKK 736
FGL+K +G + +G +P ++ +S T KSDV+ +GV + E+ T G
Sbjct: 191 FGLSKKIYSG--DYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMT 248
Query: 737 PLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPL 796
P YP V+N++ + R PE ++E +I Y C PL
Sbjct: 249 P----YPG-------------VQNHEMYDYLLHGHRLKQPEDCLDELYEIMYSCWRTDPL 291
Query: 797 KRPS 800
RP+
Sbjct: 292 DRPT 295
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 93/237 (39%), Gaps = 40/237 (16%)
Query: 506 ATSNFDRGTLLAEGKFGPVYRGFLPGGIHV-AVKVLVHG---STLTDQEAARELEYLGRI 561
A +F+ G L +GKFG VY + A+KVL + + RE+E +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 562 KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSI 621
+HPN++ L GY + I +Y G + L L +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKL--------------------SKF 110
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
+ +T A AL++ H S +IHRDIK ++ L E +++DF
Sbjct: 111 DEQRTATYITE----------LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADF 157
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
G + + G+ Y+PPE + K D++ GV+ E + GK P
Sbjct: 158 GWS-VHAPSSRRXXLXGTLDYLPPEMI--EGRMHDEKVDLWSLGVLCYEFLVGKPPF 211
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 53/93 (56%), Gaps = 6/93 (6%)
Query: 658 IIHRDIKASSVYLDMNLEPRLSDFGLAK--IFGNGLDEEIARGSPGYIPPEFAQPDSDFP 715
I+HRD+KA ++ LD ++ +++DFG + FGN LD GSP Y PE Q +
Sbjct: 127 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC--GSPPYAAPELFQ-GKKYD 183
Query: 716 TPKSDVYCYGVVLLELITGKKPL-GDDYPEEKE 747
P+ DV+ GV+L L++G P G + E +E
Sbjct: 184 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRE 216
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 646 ALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPP 705
A++FLH + I+HRD+K ++ LD N++ RLSDFG + G G+PGY+ P
Sbjct: 212 AVSFLH---ANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAP 268
Query: 706 EFAQPDSDFPTP----KSDVYCYGVVLLELITGKKPL 738
E + D P + D++ GV+L L+ G P
Sbjct: 269 EILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPF 305
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 118/305 (38%), Gaps = 57/305 (18%)
Query: 514 TLLAEGKFGPVYRGFLPGGIHVAVKVLV--HGSTLTDQEAARELEYLGRIKHPNLVPLTG 571
T L E G +++G G + VKVL ST ++ E L HPN++P+ G
Sbjct: 16 TKLNENHSGELWKGRWQGN-DIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLG 74
Query: 572 YCIA--GDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGL 629
C + I +M G+L N+LH+ + Q V
Sbjct: 75 ACQSPPAPHPTLITHWMPYGSLYNVLHE---------------GTNFVVDQSQAV----- 114
Query: 630 LTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGN 689
K AL AR +AFLH P I + + SV +D ++ R+S + F
Sbjct: 115 --------KFALDMARGMAFLH-TLEPLIPRHALNSRSVMIDEDMTARISMADVKFSF-- 163
Query: 690 GLDEEIARG-SPGYIPPEFAQPDSDFPTPKS-DVYCYGVVLLELITGKKPLGDDYPEEKE 747
+ R +P ++ PE Q + +S D++ + V+L EL+T + P D
Sbjct: 164 ---QSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFAD------- 213
Query: 748 GNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGL 807
L G + +R T P K+ +C + P KRP IV +
Sbjct: 214 ---------LSNMEIGMKVALEGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPI 264
Query: 808 LKDIE 812
L+ ++
Sbjct: 265 LEKMQ 269
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 57/113 (50%), Gaps = 6/113 (5%)
Query: 629 LLTTWRFRHKIALGTARALAFLHHGCSPP-IIHRDIKASSVYLDMNLEPRLSDFGLAKIF 687
L+ R + K A R + C I+HRD+KA ++ LD ++ +++DFG + F
Sbjct: 105 LVAHGRMKEKEARAKFRQIVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEF 164
Query: 688 --GNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
GN LD GSP Y PE Q + P+ DV+ GV+L L++G P
Sbjct: 165 TVGNKLDTFC--GSPPYAAPELFQ-GKKYDGPEVDVWSLGVILYTLVSGSLPF 214
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 132/317 (41%), Gaps = 42/317 (13%)
Query: 508 SNFDRGTLLAEGKFGPVYRGFL------PGGIHVAVKVLVHGSTLTD-QEAARELEYLGR 560
N G L EG+FG V + G VAVK+L ++ ++ ++ E L +
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 561 IKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNS 620
+ HP+++ L G C + I +Y + G+L+ L + +
Sbjct: 83 VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHP 142
Query: 621 IQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSD 680
+ + G L + F +I+ G + + ++HRD+ A ++ + + ++SD
Sbjct: 143 DERALTMGDLIS--FAWQISQG-------MQYLAEMKLVHRDLAARNILVAEGRKMKISD 193
Query: 681 FGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT-GKK 736
FGL++ ++ + S G IP ++ +S F T +SDV+ +GV+L E++T G
Sbjct: 194 FGLSRDVYE--EDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGN 251
Query: 737 PLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPL 796
P P E+ NL+ G R P+ EE ++ C P
Sbjct: 252 PY-PGIPPERLFNLL---------KTGHRM-------ERPDNCSEEMYRLMLQCWKQEPD 294
Query: 797 KRPSMQQIVGLLKDIES 813
KRP I KD+E
Sbjct: 295 KRPVFADIS---KDLEK 308
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 132/317 (41%), Gaps = 42/317 (13%)
Query: 508 SNFDRGTLLAEGKFGPVYRGFL------PGGIHVAVKVLVHGSTLTD-QEAARELEYLGR 560
N G L EG+FG V + G VAVK+L ++ ++ ++ E L +
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 561 IKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNS 620
+ HP+++ L G C + I +Y + G+L+ L + +
Sbjct: 83 VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHP 142
Query: 621 IQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSD 680
+ + G L + F +I+ G + + ++HRD+ A ++ + + ++SD
Sbjct: 143 DERALTMGDLIS--FAWQISQG-------MQYLAEMSLVHRDLAARNILVAEGRKMKISD 193
Query: 681 FGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT-GKK 736
FGL++ ++ + S G IP ++ +S F T +SDV+ +GV+L E++T G
Sbjct: 194 FGLSRDVYE--EDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGN 251
Query: 737 PLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPL 796
P P E+ NL+ G R P+ EE ++ C P
Sbjct: 252 PY-PGIPPERLFNLL---------KTGHRM-------ERPDNCSEEMYRLMLQCWKQEPD 294
Query: 797 KRPSMQQIVGLLKDIES 813
KRP I KD+E
Sbjct: 295 KRPVFADIS---KDLEK 308
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 132/317 (41%), Gaps = 42/317 (13%)
Query: 508 SNFDRGTLLAEGKFGPVYRGFL------PGGIHVAVKVLVHGSTLTD-QEAARELEYLGR 560
N G L EG+FG V + G VAVK+L ++ ++ ++ E L +
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 561 IKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNS 620
+ HP+++ L G C + I +Y + G+L+ L + +
Sbjct: 83 VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHP 142
Query: 621 IQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSD 680
+ + G L + F +I+ G + + ++HRD+ A ++ + + ++SD
Sbjct: 143 DERALTMGDLIS--FAWQISQG-------MQYLAEMKLVHRDLAARNILVAEGRKMKISD 193
Query: 681 FGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT-GKK 736
FGL++ ++ + S G IP ++ +S F T +SDV+ +GV+L E++T G
Sbjct: 194 FGLSRDVYE--EDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGN 251
Query: 737 PLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPL 796
P P E+ NL+ G R P+ EE ++ C P
Sbjct: 252 PY-PGIPPERLFNLL---------KTGHRM-------ERPDNCSEEMYRLMLQCWKQEPD 294
Query: 797 KRPSMQQIVGLLKDIES 813
KRP I KD+E
Sbjct: 295 KRPVFADIS---KDLEK 308
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 658 IIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTP 717
++HRD+K +V LD ++ +++DFGL+ + +G + GSP Y PE + P
Sbjct: 137 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVIS-GRLYAGP 195
Query: 718 KSDVYCYGVVLLELITGKKPLGDDY 742
+ D++ GV+L L+ G P DD+
Sbjct: 196 EVDIWSSGVILYALLCGTLPFDDDH 220
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 93/237 (39%), Gaps = 40/237 (16%)
Query: 506 ATSNFDRGTLLAEGKFGPVYRGFLPGGIHV-AVKVLVHG---STLTDQEAARELEYLGRI 561
A +F+ G L +GKFG VY + A+KVL + + RE+E +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 562 KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSI 621
+HPN++ L GY + I +Y G + L L +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKL--------------------SKF 110
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
+ +T A AL++ H S +IHRDIK ++ L E +++DF
Sbjct: 111 DEQRTATYITE----------LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADF 157
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
G + + G+ Y+PPE + K D++ GV+ E + GK P
Sbjct: 158 GWS-VHAPSSRRTTLCGTLDYLPPEMI--EGRMHDEKVDLWSLGVLCYEFLVGKPPF 211
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 60/121 (49%), Gaps = 3/121 (2%)
Query: 629 LLTTWRFRHKIALGTARALAFLHHGC-SPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIF 687
L+ R + K A R + C I+HRD+KA ++ LD ++ +++DFG + F
Sbjct: 105 LVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEF 164
Query: 688 GNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL-GDDYPEEK 746
G + G+P Y PE Q + P+ DV+ GV+L L++G P G + E +
Sbjct: 165 TVGGKLDAFCGAPPYAAPELFQ-GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELR 223
Query: 747 E 747
E
Sbjct: 224 E 224
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 96/227 (42%), Gaps = 37/227 (16%)
Query: 516 LAEGKFGPVYRGF-LPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCI 574
L +G FG VY+ G A KV+ S ++ E+E L HP +V L G
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 575 AGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWR 634
+ + ++ G + ++ +L G+ IQ V + L
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLELDRGL--------------TEPQIQVVCRQML----- 127
Query: 635 FRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGL-AKIFGNGLDE 693
AL FLH S IIHRD+KA +V + + + RL+DFG+ AK
Sbjct: 128 ----------EALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKR 174
Query: 694 EIARGSPGYIPPEFAQPDSDFPTP---KSDVYCYGVVLLELITGKKP 737
+ G+P ++ PE ++ TP K+D++ G+ L+E+ + P
Sbjct: 175 DSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP 221
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 96/227 (42%), Gaps = 37/227 (16%)
Query: 516 LAEGKFGPVYRGF-LPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCI 574
L +G FG VY+ G A KV+ S ++ E+E L HP +V L G
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 575 AGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWR 634
+ + ++ G + ++ +L G+ IQ V + L
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDRGL--------------TEPQIQVVCRQML----- 119
Query: 635 FRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGL-AKIFGNGLDE 693
AL FLH S IIHRD+KA +V + + + RL+DFG+ AK
Sbjct: 120 ----------EALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKR 166
Query: 694 EIARGSPGYIPPEFAQPDSDFPTP---KSDVYCYGVVLLELITGKKP 737
+ G+P ++ PE ++ TP K+D++ G+ L+E+ + P
Sbjct: 167 DSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP 213
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 100/245 (40%), Gaps = 46/245 (18%)
Query: 508 SNFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHGSTLTDQEA---ARELEYLGRIKH 563
+F G +L EG F V L A+K+L + + + RE + + R+ H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 564 PNLVPLTGYCIAGDQRIAI-YDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQ 622
P V L +C D+++ Y +NG L I+
Sbjct: 97 PFFVKLY-FCFQDDEKLYFGLSYAKNGEL--------------------------LKYIR 129
Query: 623 NVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFG 682
+GS T + +I AL +LH IIHRD+K ++ L+ ++ +++DFG
Sbjct: 130 KIGSFDETCTRFYTAEIV----SALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG 182
Query: 683 LAKIFGNGLDEEIAR---GSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL- 738
AK+ + A G+ Y+ PE S SD++ G ++ +L+ G P
Sbjct: 183 TAKVLSPESKQARANXFVGTAQYVSPELLTEKS--ACKSSDLWALGCIIYQLVAGLPPFR 240
Query: 739 -GDDY 742
G++Y
Sbjct: 241 AGNEY 245
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 95/237 (40%), Gaps = 40/237 (16%)
Query: 506 ATSNFDRGTLLAEGKFGPVYRGFLPGGIHV-AVKVLVHG---STLTDQEAARELEYLGRI 561
A +F+ G L +GKFG VY + A+KVL + + RE+E +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 562 KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSI 621
+HPN++ L GY + I +Y G + L L +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--------------------SKF 105
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
+ +T A AL++ H S +IHRDIK ++ L E +++DF
Sbjct: 106 DEQRTATYITE----------LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADF 152
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
G + + E+ G+ Y+PPE + K D++ GV+ E + GK P
Sbjct: 153 GWSVHAPSSRRTELC-GTLDYLPPEMI--EGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 139/319 (43%), Gaps = 61/319 (19%)
Query: 506 ATSNFDRGTLLAEGKFGPVYRGFLPGGIHV-AVKVLVHGSTLTD-------QEAARELEY 557
A + + + +G FG V++G L V A+K L+ G + + QE RE+
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 558 LGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXX 617
+ + HPN+V L Y + + + +++ G+L + L D ++
Sbjct: 77 MSNLNHPNIVKL--YGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIK-------------- 120
Query: 618 XNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYL---DMN- 673
W + ++ L A + ++ + +PPI+HRD+++ +++L D N
Sbjct: 121 ---------------WSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENA 164
Query: 674 -LEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELI 732
+ +++DFG ++ + + + G+ ++ PE + + T K+D Y + ++L ++
Sbjct: 165 PVCAKVADFGTSQQSVHSVSGLL--GNFQWMAPETIGAEEESYTEKADTYSFAMILYTIL 222
Query: 733 TGKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTA 792
TG+ P D+Y K ++ +R + +R T PE + LC +
Sbjct: 223 TGEGPF-DEYSYGK-IKFINMIR------------EEGLRPTIPEDCPPRLRNVIELCWS 268
Query: 793 DLPLKRPSMQQIVGLLKDI 811
P KRP IV L ++
Sbjct: 269 GDPKKRPHFSYIVKELSEL 287
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 94/237 (39%), Gaps = 40/237 (16%)
Query: 506 ATSNFDRGTLLAEGKFGPVYRGFLPGGIHV-AVKVLVHG---STLTDQEAARELEYLGRI 561
A +F+ G L +GKFG VY + A+KVL + + RE+E +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 562 KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSI 621
+HPN++ L GY + I +Y G + L L +
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--------------------SKF 106
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
+ +T A AL++ H S +IHRDIK ++ L E +++DF
Sbjct: 107 DEQRTATYITE----------LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADF 153
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
G + + + G+ Y+PPE + K D++ GV+ E + GK P
Sbjct: 154 GWS-VHAPSSRRDTLCGTLDYLPPEMI--EGRMHDEKVDLWSLGVLCYEFLVGKPPF 207
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 96/242 (39%), Gaps = 50/242 (20%)
Query: 506 ATSNFDRGTLLAEGKFGPVY------RGFLPGGIHVAVKVLVHG---STLTDQEAARELE 556
A +F+ G L +GKFG VY R F+ +A+KVL + + RE+E
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFI-----LALKVLFKAQLEKAGVEHQLRREVE 57
Query: 557 YLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXX 616
++HPN++ L GY + I +Y G + L L
Sbjct: 58 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL------------------ 99
Query: 617 XXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEP 676
+ + +T A AL++ H S +IHRDIK ++ L E
Sbjct: 100 --SKFDEQRTATYITE----------LANALSYCH---SKRVIHRDIKPENLLLGSAGEL 144
Query: 677 RLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKK 736
+++DFG + + G+ Y+PPE + K D++ GV+ E + GK
Sbjct: 145 KIADFGWS-VHAPSSRRTTLCGTLDYLPPEMI--EGRMHDEKVDLWSLGVLCYEFLVGKP 201
Query: 737 PL 738
P
Sbjct: 202 PF 203
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 658 IIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTP 717
++HRD+K +V LD ++ +++DFGL+ + +G + GSP Y PE + P
Sbjct: 132 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVIS-GRLYAGP 190
Query: 718 KSDVYCYGVVLLELITGKKPLGDDY 742
+ D++ GV+L L+ G P D++
Sbjct: 191 EVDIWSCGVILYALLCGTLPFDDEH 215
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 56/113 (49%), Gaps = 6/113 (5%)
Query: 629 LLTTWRFRHKIALGTARALAFLHHGCSPP-IIHRDIKASSVYLDMNLEPRLSDFGLAK-- 685
L+ R + K A R + C I+HRD+KA ++ LD + +++DFG +
Sbjct: 104 LVAHGRXKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADXNIKIADFGFSNEF 163
Query: 686 IFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
FGN LD G+P Y PE Q + P+ DV+ GV+L L++G P
Sbjct: 164 TFGNKLDAFC--GAPPYAAPELFQ-GKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 139/319 (43%), Gaps = 61/319 (19%)
Query: 506 ATSNFDRGTLLAEGKFGPVYRGFLPGGIHV-AVKVLVHGSTLTD-------QEAARELEY 557
A + + + +G FG V++G L V A+K L+ G + + QE RE+
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 558 LGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXX 617
+ + HPN+V L Y + + + +++ G+L + L D ++
Sbjct: 77 MSNLNHPNIVKL--YGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIK-------------- 120
Query: 618 XNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYL---DMN- 673
W + ++ L A + ++ + +PPI+HRD+++ +++L D N
Sbjct: 121 ---------------WSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENA 164
Query: 674 -LEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELI 732
+ +++DF L++ + + + G+ ++ PE + + T K+D Y + ++L ++
Sbjct: 165 PVCAKVADFSLSQQSVHSVSGLL--GNFQWMAPETIGAEEESYTEKADTYSFAMILYTIL 222
Query: 733 TGKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTA 792
TG+ P D+Y K ++ +R + +R T PE + LC +
Sbjct: 223 TGEGPF-DEYSYGK-IKFINMIR------------EEGLRPTIPEDCPPRLRNVIELCWS 268
Query: 793 DLPLKRPSMQQIVGLLKDI 811
P KRP IV L ++
Sbjct: 269 GDPKKRPHFSYIVKELSEL 287
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 103/240 (42%), Gaps = 45/240 (18%)
Query: 504 LSATSNFDRGTLLAEGKFGP--VYRGFLPGGIHVAVKV-LVHGSTLTDQEAARELEYLGR 560
+ + R + EG FG + + G +V ++ + S+ +E+ RE+ L
Sbjct: 20 FQSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLAN 79
Query: 561 IKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNS 620
+KHPN+V + DY E G+L + + GV
Sbjct: 80 MKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRI-NAQKGV------------------ 120
Query: 621 IQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSD 680
+ E + W + +AL H I+HRDIK+ +++L + +L D
Sbjct: 121 ---LFQEDQILDWFVQICLAL---------KHVHDRKILHRDIKSQNIFLTKDGTVQLGD 168
Query: 681 FGLAKIFGNGLDEEIAR---GSPGYIPPEFAQ--PDSDFPTPKSDVYCYGVVLLELITGK 735
FG+A++ + + E+AR G+P Y+ PE + P ++ KSD++ G VL EL T K
Sbjct: 169 FGIARVLNSTV--ELARACIGTPYYLSPEICENKPYNN----KSDIWALGCVLYELCTLK 222
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 55/117 (47%), Gaps = 13/117 (11%)
Query: 630 LTTWRFRHKIALGTARALAFLHH-------GCSPPIIHRDIKASSVYLDMNLEPRLSDFG 682
+ +W IA AR LA+LH G P I HRDIK+ +V L NL ++DFG
Sbjct: 117 VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFG 176
Query: 683 LAKIFGNGLDEEIARGSPG---YIPPEFAQPDSDFPTP---KSDVYCYGVVLLELIT 733
LA F G G G Y+ PE + +F + D+Y G+VL EL +
Sbjct: 177 LALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 96/237 (40%), Gaps = 40/237 (16%)
Query: 506 ATSNFDRGTLLAEGKFGPVYRGFLPGGIHV-AVKVLVHG---STLTDQEAARELEYLGRI 561
A +F+ G L +GKFG VY + A+KVL + + RE+E +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 562 KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSI 621
+HPN++ L GY + I +Y G + L L +
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--------------------SKF 131
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
+ +T A AL++ H S +IHRDIK ++ L E +++DF
Sbjct: 132 DEQRTATYITE----------LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADF 178
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
G + + +++ G+ Y+PPE + K D++ GV+ E + GK P
Sbjct: 179 GWSVHAPSSRRDDLC-GTLDYLPPEMI--EGRMHDEKVDLWSLGVLCYEFLVGKPPF 232
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 93/237 (39%), Gaps = 40/237 (16%)
Query: 506 ATSNFDRGTLLAEGKFGPVYRGFLPGGIHV-AVKVLVHG---STLTDQEAARELEYLGRI 561
A +F+ G L +GKFG VY + A+KVL + + RE+E +
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 562 KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSI 621
+HPN++ L GY + I +Y G + L L +
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--------------------SKF 122
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
+ +T A AL++ H S +IHRDIK ++ L E +++DF
Sbjct: 123 DEQRTATYITE----------LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADF 169
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
G + + G+ Y+PPE + K D++ GV+ E + GK P
Sbjct: 170 GWS-VHAPSSRRTTLCGTLDYLPPEMI--EGRMHDEKVDLWSLGVLCYEFLVGKPPF 223
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 93/237 (39%), Gaps = 40/237 (16%)
Query: 506 ATSNFDRGTLLAEGKFGPVYRGFLPGGIHV-AVKVLVHG---STLTDQEAARELEYLGRI 561
A +F+ G L +GKFG VY + A+KVL + + RE+E +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 562 KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSI 621
+HPN++ L GY + I +Y G + L L +
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--------------------SKF 107
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
+ +T A AL++ H S +IHRDIK ++ L E +++DF
Sbjct: 108 DEQRTATYITE----------LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADF 154
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
G + + G+ Y+PPE + K D++ GV+ E + GK P
Sbjct: 155 GWS-VHAPSSRRXXLCGTLDYLPPEMI--EGRMHDEKVDLWSLGVLCYEFLVGKPPF 208
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 93/237 (39%), Gaps = 40/237 (16%)
Query: 506 ATSNFDRGTLLAEGKFGPVYRGFLPGGIHV-AVKVLVHG---STLTDQEAARELEYLGRI 561
A +F+ G L +GKFG VY + A+KVL + + RE+E +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 562 KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSI 621
+HPN++ L GY + I +Y G + L L +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--------------------SKF 108
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
+ +T A AL++ H S +IHRDIK ++ L E +++DF
Sbjct: 109 DEQRTATYITE----------LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADF 155
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
G + + G+ Y+PPE + K D++ GV+ E + GK P
Sbjct: 156 GWS-VHAPSSRRTTLCGTLDYLPPEMI--EGRMHDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 95/237 (40%), Gaps = 40/237 (16%)
Query: 506 ATSNFDRGTLLAEGKFGPVYRGFLPGGIHV-AVKVLVHG---STLTDQEAARELEYLGRI 561
A +F+ G L +GKFG VY + A+KVL + + RE+E +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 562 KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSI 621
+HPN++ L GY + I +Y G + L L +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--------------------SKF 110
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
+ +T A AL++ H S +IHRDIK ++ L E +++DF
Sbjct: 111 DEQRTATYITE----------LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADF 157
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
G + + ++ G+ Y+PPE + K D++ GV+ E + GK P
Sbjct: 158 GWSVHAPSSRRTDLC-GTLDYLPPEMI--EGRMHDEKVDLWSLGVLCYEFLVGKPPF 211
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 93/237 (39%), Gaps = 40/237 (16%)
Query: 506 ATSNFDRGTLLAEGKFGPVYRGFLPGGIHV-AVKVLVHG---STLTDQEAARELEYLGRI 561
A +F+ G L +GKFG VY + A+KVL + + RE+E +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 562 KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSI 621
+HPN++ L GY + I +Y G + L L +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--------------------SKF 110
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
+ +T A AL++ H S +IHRDIK ++ L E +++DF
Sbjct: 111 DEQRTATYITE----------LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADF 157
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
G + + G+ Y+PPE + K D++ GV+ E + GK P
Sbjct: 158 GWS-VHAPSSRRTTLCGTLDYLPPEMI--EGRMHDEKVDLWSLGVLCYEFLVGKPPF 211
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 95/237 (40%), Gaps = 40/237 (16%)
Query: 506 ATSNFDRGTLLAEGKFGPVYRGFLPGGIHV-AVKVLVHG---STLTDQEAARELEYLGRI 561
A +F+ G L +GKFG VY + A+KVL + + RE+E +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 562 KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSI 621
+HPN++ L GY + I +Y G + L L +
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--------------------SKF 106
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
+ +T A AL++ H S +IHRDIK ++ L E +++DF
Sbjct: 107 DEQRTATYITE----------LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADF 153
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
G + + ++ G+ Y+PPE + K D++ GV+ E + GK P
Sbjct: 154 GWSVHAPSSRRTDLC-GTLDYLPPEMI--EGRMHDEKVDLWSLGVLCYEFLVGKPPF 207
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 96/237 (40%), Gaps = 40/237 (16%)
Query: 506 ATSNFDRGTLLAEGKFGPVYRGFLPGGIHV-AVKVLVHG---STLTDQEAARELEYLGRI 561
A +F+ G L +GKFG VY + A+KVL + + RE+E +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 562 KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSI 621
+HPN++ L GY + I +Y G + L L +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--------------------SKF 108
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
+ +T A AL++ H S +IHRDIK ++ L E +++DF
Sbjct: 109 DEQRTATYITE----------LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADF 155
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
G + + +++ G+ Y+PPE + K D++ GV+ E + GK P
Sbjct: 156 GWSVHAPSSRRDDLC-GTLDYLPPEMIE--GRMHDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 93/235 (39%), Gaps = 40/235 (17%)
Query: 508 SNFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHG---STLTDQEAARELEYLGRIKH 563
+FD G L +GKFG VY +A+KVL + + RE+E ++H
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 564 PNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQN 623
PN++ L GY + I +Y G + L L +
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--------------------SRFDE 111
Query: 624 VGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGL 683
+ +T A AL++ H S +IHRDIK ++ L N E +++DFG
Sbjct: 112 QRTATYITE----------LANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGW 158
Query: 684 AKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
+ + + G+ Y+PPE + K D++ GV+ E + G P
Sbjct: 159 S-VHAPSSRRDTLCGTLDYLPPEMI--EGRMHDEKVDLWSLGVLCYEFLVGMPPF 210
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 95/237 (40%), Gaps = 40/237 (16%)
Query: 506 ATSNFDRGTLLAEGKFGPVYRGFLPGGIHV-AVKVLVHG---STLTDQEAARELEYLGRI 561
A +F+ G L +GKFG VY + A+KVL + + RE+E +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 562 KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSI 621
+HPN++ L GY + I +Y G + L L +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--------------------SKF 105
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
+ +T A AL++ H S +IHRDIK ++ L E +++DF
Sbjct: 106 DEQRTATYITE----------LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADF 152
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
G + + ++ G+ Y+PPE + K D++ GV+ E + GK P
Sbjct: 153 GWSVHAPSSRRTDLC-GTLDYLPPEMI--EGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 95/237 (40%), Gaps = 40/237 (16%)
Query: 506 ATSNFDRGTLLAEGKFGPVYRGFLPGGIHV-AVKVLVHG---STLTDQEAARELEYLGRI 561
A +F+ G L +GKFG VY + A+KVL + + RE+E +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 562 KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSI 621
+HPN++ L GY + I +Y G + L L +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--------------------SKF 105
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
+ +T A AL++ H S +IHRDIK ++ L E +++DF
Sbjct: 106 DEQRTATYITE----------LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADF 152
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
G + + ++ G+ Y+PPE + K D++ GV+ E + GK P
Sbjct: 153 GWSVHAPSSRRTDLC-GTLDYLPPEMI--EGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 658 IIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTP 717
++HRD+K +V LD ++ +++DFGL+ + +G + GSP Y PE + P
Sbjct: 132 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVIS-GRLYAGP 190
Query: 718 KSDVYCYGVVLLELITGKKPLGDDY 742
+ D++ GV+L L+ G P D++
Sbjct: 191 EVDIWSCGVILYALLCGTLPFDDEH 215
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 93/237 (39%), Gaps = 40/237 (16%)
Query: 506 ATSNFDRGTLLAEGKFGPVYRGFLPGGIHV-AVKVLVHG---STLTDQEAARELEYLGRI 561
A +F+ G L +GKFG VY + A+KVL + + RE+E +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 562 KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSI 621
+HPN++ L GY + I +Y G + L L +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--------------------SKF 105
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
+ +T A AL++ H S +IHRDIK ++ L E +++DF
Sbjct: 106 DEQRTATYITE----------LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADF 152
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
G + + G+ Y+PPE + K D++ GV+ E + GK P
Sbjct: 153 GWS-VHAPSSRRTTLCGTLDYLPPEMI--EGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 93/237 (39%), Gaps = 40/237 (16%)
Query: 506 ATSNFDRGTLLAEGKFGPVYRGFLPGGIHV-AVKVLVHG---STLTDQEAARELEYLGRI 561
A +F+ G L +GKFG VY + A+KVL + + RE+E +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 562 KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSI 621
+HPN++ L GY + I +Y G + L L +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--------------------SKF 108
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
+ +T A AL++ H S +IHRDIK ++ L E +++DF
Sbjct: 109 DEQRTATYITE----------LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADF 155
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
G + + G+ Y+PPE + K D++ GV+ E + GK P
Sbjct: 156 GWS-VHAPSSRRAALCGTLDYLPPEMI--EGRMHDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 93/237 (39%), Gaps = 40/237 (16%)
Query: 506 ATSNFDRGTLLAEGKFGPVYRGFLPGGIHV-AVKVLVHG---STLTDQEAARELEYLGRI 561
A +F+ G L +GKFG VY + A+KVL + + RE+E +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 562 KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSI 621
+HPN++ L GY + I +Y G + L L +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--------------------SKF 108
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
+ +T A AL++ H S +IHRDIK ++ L E +++DF
Sbjct: 109 DEQRTATYITE----------LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADF 155
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
G + + G+ Y+PPE + K D++ GV+ E + GK P
Sbjct: 156 GWS-VHAPSSRRXXLCGTLDYLPPEMI--EGRMHDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 60/112 (53%), Gaps = 15/112 (13%)
Query: 634 RFRHKIALGTARALAFLH--HGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGL 691
R K+ + +AL +L HG +IHRD+K S++ LD + +L DFG++ +
Sbjct: 124 RILGKMTVAIVKALYYLKEKHG----VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK 179
Query: 692 DEEIARGSPGYI------PPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKP 737
++ + G Y+ PP+ +PD D ++DV+ G+ L+EL TG+ P
Sbjct: 180 AKDRSAGCAAYMAPERIDPPDPTKPDYDI---RADVWSLGISLVELATGQFP 228
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 93/237 (39%), Gaps = 40/237 (16%)
Query: 506 ATSNFDRGTLLAEGKFGPVYRGFLPGGIHV-AVKVLVHG---STLTDQEAARELEYLGRI 561
A +F+ G L +GKFG VY + A+KVL + + RE+E +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 562 KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSI 621
+HPN++ L GY + I +Y G + L L +
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKL--------------------SKF 105
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
+ +T A AL++ H S +IHRDIK ++ L E +++DF
Sbjct: 106 DEQRTATYITE----------LANALSYCH---SKKVIHRDIKPENLLLGSAGELKIADF 152
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
G + + G+ Y+PPE + K D++ GV+ E + GK P
Sbjct: 153 GWS-VHAPSSRRAALCGTLDYLPPEMI--EGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 93/237 (39%), Gaps = 40/237 (16%)
Query: 506 ATSNFDRGTLLAEGKFGPVYRGFLPGGIHV-AVKVLVHG---STLTDQEAARELEYLGRI 561
A +F+ G L +GKFG VY + A+KVL + + RE+E +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 562 KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSI 621
+HPN++ L GY + I +Y G + L L +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--------------------SKF 108
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
+ +T A AL++ H S +IHRDIK ++ L E +++DF
Sbjct: 109 DEQRTATYITE----------LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADF 155
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
G + + G+ Y+PPE + K D++ GV+ E + GK P
Sbjct: 156 GWS-VHAPSSRRTTLCGTLDYLPPEMI--EGRMHDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 92/237 (38%), Gaps = 40/237 (16%)
Query: 506 ATSNFDRGTLLAEGKFGPVYRGFLPGGIHV-AVKVLVHG---STLTDQEAARELEYLGRI 561
A +F+ G L +GKFG VY + A+KVL + + RE+E +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 562 KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSI 621
+HPN++ L GY + I +Y G + L L +
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--------------------SKF 106
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
+ +T A AL++ H S +IHRDIK ++ L E +++DF
Sbjct: 107 DEQRTATYITE----------LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADF 153
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
G + G+ Y+PPE + K D++ GV+ E + GK P
Sbjct: 154 GWS-CHAPSSRRTTLSGTLDYLPPEMI--EGRMHDEKVDLWSLGVLCYEFLVGKPPF 207
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 93/237 (39%), Gaps = 40/237 (16%)
Query: 506 ATSNFDRGTLLAEGKFGPVYRGFLPGGIHV-AVKVLVHG---STLTDQEAARELEYLGRI 561
A +F+ G L +GKFG VY + A+KVL + + RE+E +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 562 KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSI 621
+HPN++ L GY + I +Y G + L L +
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--------------------SKF 131
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
+ +T A AL++ H S +IHRDIK ++ L E +++DF
Sbjct: 132 DEQRTATYITE----------LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADF 178
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
G + + G+ Y+PPE + K D++ GV+ E + GK P
Sbjct: 179 GWS-VHAPSSRRTTLCGTLDYLPPEMI--EGRMHDEKVDLWSLGVLCYEFLVGKPPF 232
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 93/237 (39%), Gaps = 40/237 (16%)
Query: 506 ATSNFDRGTLLAEGKFGPVYRGFLPGGIHV-AVKVLVHG---STLTDQEAARELEYLGRI 561
A +F+ G L +GKFG VY + A+KVL + + RE+E +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 562 KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSI 621
+HPN++ L GY + I +Y G + L L +
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--------------------SKF 104
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
+ +T A AL++ H S +IHRDIK ++ L E +++DF
Sbjct: 105 DEQRTATYITE----------LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADF 151
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
G + + G+ Y+PPE + K D++ GV+ E + GK P
Sbjct: 152 GWS-VHAPSSRRTTLCGTLDYLPPEMI--EGRMHDEKVDLWSLGVLCYEFLVGKPPF 205
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 93/237 (39%), Gaps = 40/237 (16%)
Query: 506 ATSNFDRGTLLAEGKFGPVYRGFLPGGIHV-AVKVLVHG---STLTDQEAARELEYLGRI 561
A +F+ G L +GKFG VY + A+KVL + + RE+E +
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 562 KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSI 621
+HPN++ L GY + I +Y G + L L +
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--------------------SKF 109
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
+ +T A AL++ H S +IHRDIK ++ L E +++DF
Sbjct: 110 DEQRTATYITE----------LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADF 156
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
G + + G+ Y+PPE + K D++ GV+ E + GK P
Sbjct: 157 GWS-VHAPSSRRTTLCGTLDYLPPEMI--EGRMHDEKVDLWSLGVLCYEFLVGKPPF 210
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 93/237 (39%), Gaps = 40/237 (16%)
Query: 506 ATSNFDRGTLLAEGKFGPVYRGFLPGGIHV-AVKVLVHG---STLTDQEAARELEYLGRI 561
A +F+ G L +GKFG VY + A+KVL + + RE+E +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 562 KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSI 621
+HPN++ L GY + I +Y G + L L +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--------------------SKF 105
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
+ +T A AL++ H S +IHRDIK ++ L E +++DF
Sbjct: 106 DEQRTATYITE----------LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADF 152
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
G + + G+ Y+PPE + K D++ GV+ E + GK P
Sbjct: 153 GWS-VHAPSSRRXXLCGTLDYLPPEMI--EGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 103/241 (42%), Gaps = 47/241 (19%)
Query: 510 FDRGTLLAEGKFGPVYRGFLPGGIHV-AVKVL-VHGSTLTDQEAARELEYLGRIKHPNLV 567
F + + +G FG VY+G V A+K++ + + ++ +E+ L + P +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 568 PLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSE 627
G + + I +Y+ G+ +LL PL E
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPL-------------------------EE 115
Query: 628 GLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIF 687
+ T I + L +LH S IHRDIKA++V L + +L+DFG+A
Sbjct: 116 TYIAT------ILREILKGLDYLH---SERKIHRDIKAANVLLSEQGDVKLADFGVA--- 163
Query: 688 GNGLDEEIAR----GSPGYIPPE-FAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDY 742
G D +I R G+P ++ PE Q DF K+D++ G+ +EL G+ P D +
Sbjct: 164 GQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDF---KADIWSLGITAIELAKGEPPNSDLH 220
Query: 743 P 743
P
Sbjct: 221 P 221
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 93/237 (39%), Gaps = 40/237 (16%)
Query: 506 ATSNFDRGTLLAEGKFGPVYRGFLPGGIHV-AVKVLVHG---STLTDQEAARELEYLGRI 561
A +F+ G L +GKFG VY + A+KVL + + RE+E +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 562 KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSI 621
+HPN++ L GY + I +Y G + L L +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--------------------SKF 105
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
+ +T A AL++ H S +IHRDIK ++ L E +++DF
Sbjct: 106 DEQRTATYITE----------LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADF 152
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
G + + G+ Y+PPE + K D++ GV+ E + GK P
Sbjct: 153 GWS-VHAPSSRRAALCGTLDYLPPEMI--EGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 92/235 (39%), Gaps = 40/235 (17%)
Query: 508 SNFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHG---STLTDQEAARELEYLGRIKH 563
+FD G L +GKFG VY +A+KVL + + RE+E ++H
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 564 PNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQN 623
PN++ L GY + I +Y G + L L +
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--------------------SRFDE 111
Query: 624 VGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGL 683
+ +T A AL++ H S +IHRDIK ++ L N E +++DFG
Sbjct: 112 QRTATYITE----------LANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGW 158
Query: 684 AKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
+ + G+ Y+PPE + K D++ GV+ E + G P
Sbjct: 159 S-VHAPSSRRTTLCGTLDYLPPEMI--EGRMHDEKVDLWSLGVLCYEFLVGMPPF 210
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 93/237 (39%), Gaps = 40/237 (16%)
Query: 506 ATSNFDRGTLLAEGKFGPVYRGFLPGGIHV-AVKVLVHG---STLTDQEAARELEYLGRI 561
A +F+ G L +GKFG VY + A+KVL + + RE+E +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 562 KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSI 621
+HPN++ L GY + I +Y G + L L +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--------------------SKF 105
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
+ +T A AL++ H S +IHRDIK ++ L E +++DF
Sbjct: 106 DEQRTATYITE----------LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADF 152
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
G + + G+ Y+PPE + K D++ GV+ E + GK P
Sbjct: 153 GWS-VHAPSSRRTXLCGTLDYLPPEMI--EGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 103/235 (43%), Gaps = 46/235 (19%)
Query: 508 SNFDRGTLLAEGKFGPVY--RGFLPGGIHVAVKVLVHGST--LTDQEAARELEYLGRIKH 563
+++ + EG +G V+ R G I VA+K + + + A RE+ L ++KH
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQI-VAIKKFLESEDDPVIKKIALREIRMLKQLKH 61
Query: 564 PNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQN 623
PNLV L + +++Y ++ +LH+L + Q
Sbjct: 62 PNLVNLLEVFRRKRRLHLVFEYCDH----TVLHEL--------------------DRYQR 97
Query: 624 VGSEGLLTTWRFRHKIALGTARALAFLH-HGCSPPIIHRDIKASSVYLDMNLEPRLSDFG 682
E L+ + I T +A+ F H H C IHRD+K ++ + + +L DFG
Sbjct: 98 GVPEHLVKS------ITWQTLQAVNFCHKHNC----IHRDVKPENILITKHSVIKLCDFG 147
Query: 683 LAKIF---GNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITG 734
A++ + D+E+A + Y PE D+ + P DV+ G V EL++G
Sbjct: 148 FARLLTGPSDYYDDEVA--TRWYRSPELLVGDTQY-GPPVDVWAIGCVFAELLSG 199
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 102/230 (44%), Gaps = 42/230 (18%)
Query: 516 LAEGKFGPVYRGFL---PGGIHVAVKVLVHGSTLTD-QEAARELEYLGRIKHPNLVPLTG 571
L G FG V +G I VA+KVL G+ D +E RE + + ++ +P +V L G
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 572 YCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLT 631
C A + + + M G LH +G + + NV
Sbjct: 78 VCQA--EALMLVMEMAGGGP---LHKFLVGKREEI-------------PVSNVAE----- 114
Query: 632 TWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGL 691
H++++G + +L +HRD+ A +V L ++SDFGL+K G
Sbjct: 115 ---LLHQVSMG----MKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADD 164
Query: 692 DEEIARGSPGYIPPEFAQPDS-DFP--TPKSDVYCYGVVLLELIT-GKKP 737
AR S G P ++ P+ +F + +SDV+ YGV + E ++ G+KP
Sbjct: 165 SYYTAR-SAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKP 213
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 56/103 (54%), Gaps = 12/103 (11%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIAR----GSP 700
+ L +LH S IHRDIKA++V L + +L+DFG+A G D +I R G+P
Sbjct: 131 KGLDYLH---SEKKIHRDIKAANVLLSEQGDVKLADFGVA---GQLTDTQIKRNTFVGTP 184
Query: 701 GYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYP 743
++ PE Q + K+D++ G+ +EL G+ P D +P
Sbjct: 185 FWMAPEVIQQSA--YDSKADIWSLGITAIELAKGEPPNSDMHP 225
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 8/109 (7%)
Query: 638 KIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIAR 697
KI L T +AL L IIHRDIK S++ LD + +L DFG++ + + +
Sbjct: 129 KITLATVKALNHLKENLK--IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDA 186
Query: 698 GSPGYIPPEFAQPDSDFP--TPKSDVYCYGVVLLELITGKKPLGDDYPE 744
G Y+ PE P + +SDV+ G+ L EL TG+ P YP+
Sbjct: 187 GCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFP----YPK 231
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 93/237 (39%), Gaps = 40/237 (16%)
Query: 506 ATSNFDRGTLLAEGKFGPVYRGFLPGGIHV-AVKVLVHG---STLTDQEAARELEYLGRI 561
A +F+ G L +GKFG VY + A+KVL + + RE+E +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 562 KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSI 621
+HPN++ L GY + I +Y G + L L +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--------------------SKF 110
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
+ +T A AL++ H S +IHRDIK ++ L E +++DF
Sbjct: 111 DEQRTATYITE----------LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADF 157
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
G + + G+ Y+PPE + K D++ GV+ E + GK P
Sbjct: 158 GWS-VHAPSSRRTTLCGTLDYLPPEXIEGRXH--DEKVDLWSLGVLCYEFLVGKPPF 211
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 92/236 (38%), Gaps = 42/236 (17%)
Query: 508 SNFDRGTLLAEGKFGPVYRGFLPGGIHV-AVKVLVHGSTL---TDQEAARELEYLGRIKH 563
+FD G L +GKFG VY + A+KVL + + RE+E ++H
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 564 PNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQN 623
PN++ + Y + + ++ G L +Q
Sbjct: 75 PNILRMYNYFHDRKRIYLMLEFAPRGEL--------------------------YKELQK 108
Query: 624 VGSEGLLTTWRFRHKIALGTARALA-FLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFG 682
G RF + + LA LH+ +IHRDIK ++ + E +++DFG
Sbjct: 109 HG--------RFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFG 160
Query: 683 LAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
+ + L G+ Y+PPE + + K D++C GV+ E + G P
Sbjct: 161 WS-VHAPSLRRRXMCGTLDYLPPEMIEGKTH--DEKVDLWCAGVLCYEFLVGMPPF 213
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 99/245 (40%), Gaps = 46/245 (18%)
Query: 508 SNFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHGSTLTDQEA---ARELEYLGRIKH 563
+F G +L EG F V L A+K+L + + + RE + + R+ H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 564 PNLVPLTGYCIAGDQRIAI-YDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQ 622
P V L + D+++ Y +NG L I+
Sbjct: 89 PFFVKLY-FTFQDDEKLYFGLSYAKNGEL--------------------------LKYIR 121
Query: 623 NVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFG 682
+GS T + +I AL +LH IIHRD+K ++ L+ ++ +++DFG
Sbjct: 122 KIGSFDETCTRFYTAEIV----SALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG 174
Query: 683 LAKIFGNGLDEEIAR---GSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL- 738
AK+ + A G+ Y+ PE S SD++ G ++ +L+ G P
Sbjct: 175 TAKVLSPESKQARANSFVGTAQYVSPELLTEKS--ACKSSDLWALGCIIYQLVAGLPPFR 232
Query: 739 -GDDY 742
G++Y
Sbjct: 233 AGNEY 237
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 93/237 (39%), Gaps = 40/237 (16%)
Query: 506 ATSNFDRGTLLAEGKFGPVYRGFLPGGIHV-AVKVLVHG---STLTDQEAARELEYLGRI 561
A +F+ G L +GKFG VY + A+KVL + + RE+E +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 562 KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSI 621
+HPN++ L GY + I +Y G + L L +
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--------------------SKF 107
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
+ +T A AL++ H S +IHRDIK ++ L E ++++F
Sbjct: 108 DEQRTATYITE----------LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANF 154
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
G + + G+ Y+PPE + K D++ GV+ E + GK P
Sbjct: 155 GWS-VHAPSSRRTTLCGTLDYLPPEMI--EGRMHDEKVDLWSLGVLCYEFLVGKPPF 208
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 99/245 (40%), Gaps = 46/245 (18%)
Query: 508 SNFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHGSTLTDQEA---ARELEYLGRIKH 563
+F G +L EG F V L A+K+L + + + RE + + R+ H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 564 PNLVPLTGYCIAGDQRIAI-YDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQ 622
P V L + D+++ Y +NG L I+
Sbjct: 89 PFFVKLY-FTFQDDEKLYFGLSYAKNGEL--------------------------LKYIR 121
Query: 623 NVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFG 682
+GS T + +I AL +LH IIHRD+K ++ L+ ++ +++DFG
Sbjct: 122 KIGSFDETCTRFYTAEIV----SALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG 174
Query: 683 LAKIFGNGLDEEIAR---GSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL- 738
AK+ + A G+ Y+ PE S SD++ G ++ +L+ G P
Sbjct: 175 TAKVLSPESKQARANXFVGTAQYVSPELLTEKS--ACKSSDLWALGCIIYQLVAGLPPFR 232
Query: 739 -GDDY 742
G++Y
Sbjct: 233 AGNEY 237
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 92/236 (38%), Gaps = 42/236 (17%)
Query: 508 SNFDRGTLLAEGKFGPVYRGFLPGGIHV-AVKVLVHGSTL---TDQEAARELEYLGRIKH 563
+FD G L +GKFG VY + A+KVL + + RE+E ++H
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 564 PNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQN 623
PN++ + Y + + ++ G L +Q
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGEL--------------------------YKELQK 107
Query: 624 VGSEGLLTTWRFRHKIALGTARALA-FLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFG 682
G RF + + LA LH+ +IHRDIK ++ + E +++DFG
Sbjct: 108 HG--------RFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFG 159
Query: 683 LAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
+ + L G+ Y+PPE + + K D++C GV+ E + G P
Sbjct: 160 WS-VHAPSLRRRXMCGTLDYLPPEMIEGKTH--DEKVDLWCAGVLCYEFLVGMPPF 212
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 85/210 (40%), Gaps = 50/210 (23%)
Query: 535 VAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNL 594
VAVK L H + ++ RE+E L ++H N+V G C + +R NL+ +
Sbjct: 49 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR----------NLKLI 98
Query: 595 LHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGC 654
+ LP G L + +HK + + L + C
Sbjct: 99 MEYLPYGS---------------------------LRDYLQKHKERIDHIKLLQYTSQIC 131
Query: 655 -------SPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIAR-GSPGYIPPE 706
+ IHRD+ ++ ++ ++ DFGL K+ D+E + PG P
Sbjct: 132 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ--DKEXXKVKEPGESPIF 189
Query: 707 FAQPDSDFPTP---KSDVYCYGVVLLELIT 733
+ P+S + SDV+ +GVVL EL T
Sbjct: 190 WYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 85/210 (40%), Gaps = 50/210 (23%)
Query: 535 VAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNL 594
VAVK L H + ++ RE+E L ++H N+V G C + +R NL+ +
Sbjct: 47 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR----------NLKLI 96
Query: 595 LHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGC 654
+ LP G L + +HK + + L + C
Sbjct: 97 MEYLPYGS---------------------------LRDYLQKHKERIDHIKLLQYTSQIC 129
Query: 655 -------SPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIAR-GSPGYIPPE 706
+ IHRD+ ++ ++ ++ DFGL K+ D+E + PG P
Sbjct: 130 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ--DKEXXKVKEPGESPIF 187
Query: 707 FAQPDSDFPTP---KSDVYCYGVVLLELIT 733
+ P+S + SDV+ +GVVL EL T
Sbjct: 188 WYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 85/210 (40%), Gaps = 50/210 (23%)
Query: 535 VAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNL 594
VAVK L H + ++ RE+E L ++H N+V G C + +R NL+ +
Sbjct: 73 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR----------NLKLI 122
Query: 595 LHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGC 654
+ LP G L + +HK + + L + C
Sbjct: 123 MEYLPYGS---------------------------LRDYLQKHKERIDHIKLLQYTSQIC 155
Query: 655 -------SPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIAR-GSPGYIPPE 706
+ IHRD+ ++ ++ ++ DFGL K+ D+E + PG P
Sbjct: 156 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ--DKEXXKVKEPGESPIF 213
Query: 707 FAQPDSDFPTP---KSDVYCYGVVLLELIT 733
+ P+S + SDV+ +GVVL EL T
Sbjct: 214 WYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 85/210 (40%), Gaps = 50/210 (23%)
Query: 535 VAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNL 594
VAVK L H + ++ RE+E L ++H N+V G C + +R NL+ +
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR----------NLKLI 91
Query: 595 LHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGC 654
+ LP G L + +HK + + L + C
Sbjct: 92 MEYLPYGS---------------------------LRDYLQKHKERIDHIKLLQYTSQIC 124
Query: 655 -------SPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIAR-GSPGYIPPE 706
+ IHRD+ ++ ++ ++ DFGL K+ D+E + PG P
Sbjct: 125 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ--DKEXXKVKEPGESPIF 182
Query: 707 FAQPDSDFPTP---KSDVYCYGVVLLELIT 733
+ P+S + SDV+ +GVVL EL T
Sbjct: 183 WYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 85/210 (40%), Gaps = 50/210 (23%)
Query: 535 VAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNL 594
VAVK L H + ++ RE+E L ++H N+V G C + +R NL+ +
Sbjct: 48 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR----------NLKLI 97
Query: 595 LHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGC 654
+ LP G L + +HK + + L + C
Sbjct: 98 MEYLPYGS---------------------------LRDYLQKHKERIDHIKLLQYTSQIC 130
Query: 655 -------SPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIAR-GSPGYIPPE 706
+ IHRD+ ++ ++ ++ DFGL K+ D+E + PG P
Sbjct: 131 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ--DKEXXKVKEPGESPIF 188
Query: 707 FAQPDSDFPTP---KSDVYCYGVVLLELIT 733
+ P+S + SDV+ +GVVL EL T
Sbjct: 189 WYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 85/210 (40%), Gaps = 50/210 (23%)
Query: 535 VAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNL 594
VAVK L H + ++ RE+E L ++H N+V G C + +R NL+ +
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR----------NLKLI 91
Query: 595 LHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGC 654
+ LP G L + +HK + + L + C
Sbjct: 92 MEYLPYGS---------------------------LRDYLQKHKERIDHIKLLQYTSQIC 124
Query: 655 -------SPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIAR-GSPGYIPPE 706
+ IHRD+ ++ ++ ++ DFGL K+ D+E + PG P
Sbjct: 125 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ--DKEXXKVKEPGESPIF 182
Query: 707 FAQPDSDFPTP---KSDVYCYGVVLLELIT 733
+ P+S + SDV+ +GVVL EL T
Sbjct: 183 WYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 85/210 (40%), Gaps = 50/210 (23%)
Query: 535 VAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNL 594
VAVK L H + ++ RE+E L ++H N+V G C + +R NL+ +
Sbjct: 60 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR----------NLKLI 109
Query: 595 LHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGC 654
+ LP G L + +HK + + L + C
Sbjct: 110 MEYLPYGS---------------------------LRDYLQKHKERIDHIKLLQYTSQIC 142
Query: 655 -------SPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIAR-GSPGYIPPE 706
+ IHRD+ ++ ++ ++ DFGL K+ D+E + PG P
Sbjct: 143 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ--DKEXXKVKEPGESPIF 200
Query: 707 FAQPDSDFPTP---KSDVYCYGVVLLELIT 733
+ P+S + SDV+ +GVVL EL T
Sbjct: 201 WYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 101/245 (41%), Gaps = 65/245 (26%)
Query: 517 AEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEA---ARELEYLGRIKHPNLVPLTGYC 573
A G+FG V++ L VAVK+ L D+++ RE+ +KH NL+
Sbjct: 24 ARGRFGCVWKAQLMNDF-VAVKIF----PLQDKQSWQSEREIFSTPGMKHENLLQF---- 74
Query: 574 IAGDQRIA--------IYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVG 625
IA ++R + I + + G+L + L
Sbjct: 75 IAAEKRGSNLEVELWLITAFHDKGSLTDYL------------------------------ 104
Query: 626 SEGLLTTWRFRHKIALGTARALAFLHH--------GCSPPIIHRDIKASSVYLDMNLEPR 677
+G + TW +A +R L++LH G P I HRD K+ +V L +L
Sbjct: 105 -KGNIITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAV 163
Query: 678 LSDFGLAKIFGNGL---DEEIARGSPGYIPPEFAQPDSDFPTP---KSDVYCYGVVLLEL 731
L+DFGLA F G D G+ Y+ PE + +F + D+Y G+VL EL
Sbjct: 164 LADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWEL 223
Query: 732 ITGKK 736
++ K
Sbjct: 224 VSRCK 228
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 69/141 (48%), Gaps = 19/141 (13%)
Query: 639 IALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGL-AKIFGNGLDEEIAR 697
+ +ALA+LH + +IHRDIK+ S+ L ++ +LSDFG A+I + +
Sbjct: 146 VCEAVLQALAYLH---AQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLV 202
Query: 698 GSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWVRGL 757
G+P ++ PE + D++ G++++E++ G+ P D P + L
Sbjct: 203 GTPYWMAPEVI--SRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRL------- 253
Query: 758 VRNN-----KGSRAIDPKIRD 773
R++ K S + P +RD
Sbjct: 254 -RDSPPPKLKNSHKVSPVLRD 273
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 85/210 (40%), Gaps = 50/210 (23%)
Query: 535 VAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNL 594
VAVK L H + ++ RE+E L ++H N+V G C + +R NL+ +
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR----------NLKLI 94
Query: 595 LHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGC 654
+ LP G L + +HK + + L + C
Sbjct: 95 MEYLPYGS---------------------------LRDYLQKHKERIDHIKLLQYTSQIC 127
Query: 655 -------SPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIAR-GSPGYIPPE 706
+ IHRD+ ++ ++ ++ DFGL K+ D+E + PG P
Sbjct: 128 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ--DKEXXKVKEPGESPIF 185
Query: 707 FAQPDSDFPTP---KSDVYCYGVVLLELIT 733
+ P+S + SDV+ +GVVL EL T
Sbjct: 186 WYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
Query: 659 IHRDIKASSVYLDMNLEPRLSDFG-LAKIFGNG-LDEEIARGSPGYIPPEFAQPDSD--- 713
+HRDIK +V LD+N RL+DFG K+ +G + +A G+P YI PE Q D
Sbjct: 213 VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMG 272
Query: 714 FPTPKSDVYCYGVVLLELITGKKPL 738
P+ D + GV + E++ G+ P
Sbjct: 273 KYGPECDWWSLGVCMYEMLYGETPF 297
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 85/210 (40%), Gaps = 50/210 (23%)
Query: 535 VAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNL 594
VAVK L H + ++ RE+E L ++H N+V G C + +R NL+ +
Sbjct: 60 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR----------NLKLI 109
Query: 595 LHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGC 654
+ LP G L + +HK + + L + C
Sbjct: 110 MEYLPYGS---------------------------LRDYLQKHKERIDHIKLLQYTSQIC 142
Query: 655 -------SPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIAR-GSPGYIPPE 706
+ IHRD+ ++ ++ ++ DFGL K+ D+E + PG P
Sbjct: 143 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ--DKEXXKVKEPGESPIF 200
Query: 707 FAQPDSDFPTP---KSDVYCYGVVLLELIT 733
+ P+S + SDV+ +GVVL EL T
Sbjct: 201 WYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 85/210 (40%), Gaps = 50/210 (23%)
Query: 535 VAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNL 594
VAVK L H + ++ RE+E L ++H N+V G C + +R NL+ +
Sbjct: 40 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR----------NLKLI 89
Query: 595 LHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGC 654
+ LP G L + +HK + + L + C
Sbjct: 90 MEYLPYGS---------------------------LRDYLQKHKERIDHIKLLQYTSQIC 122
Query: 655 -------SPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIAR-GSPGYIPPE 706
+ IHRD+ ++ ++ ++ DFGL K+ D+E + PG P
Sbjct: 123 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ--DKEXXKVKEPGESPIF 180
Query: 707 FAQPDSDFPTP---KSDVYCYGVVLLELIT 733
+ P+S + SDV+ +GVVL EL T
Sbjct: 181 WYAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 85/210 (40%), Gaps = 50/210 (23%)
Query: 535 VAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNL 594
VAVK L H + ++ RE+E L ++H N+V G C + +R NL+ +
Sbjct: 41 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR----------NLKLI 90
Query: 595 LHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGC 654
+ LP G L + +HK + + L + C
Sbjct: 91 MEYLPYGS---------------------------LRDYLQKHKERIDHIKLLQYTSQIC 123
Query: 655 -------SPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIAR-GSPGYIPPE 706
+ IHRD+ ++ ++ ++ DFGL K+ D+E + PG P
Sbjct: 124 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ--DKEXXKVKEPGESPIF 181
Query: 707 FAQPDSDFPTP---KSDVYCYGVVLLELIT 733
+ P+S + SDV+ +GVVL EL T
Sbjct: 182 WYAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 85/210 (40%), Gaps = 50/210 (23%)
Query: 535 VAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNL 594
VAVK L H + ++ RE+E L ++H N+V G C + +R NL+ +
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR----------NLKLI 91
Query: 595 LHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGC 654
+ LP G L + +HK + + L + C
Sbjct: 92 MEYLPYGS---------------------------LRDYLQKHKERIDHIKLLQYTSQIC 124
Query: 655 -------SPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIAR-GSPGYIPPE 706
+ IHRD+ ++ ++ ++ DFGL K+ D+E + PG P
Sbjct: 125 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ--DKEFFKVKEPGESPIF 182
Query: 707 FAQPDSDFPTP---KSDVYCYGVVLLELIT 733
+ P+S + SDV+ +GVVL EL T
Sbjct: 183 WYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
Query: 659 IHRDIKASSVYLDMNLEPRLSDFG-LAKIFGNG-LDEEIARGSPGYIPPEFAQPDSD--- 713
+HRDIK +V LD+N RL+DFG K+ +G + +A G+P YI PE Q D
Sbjct: 197 VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMG 256
Query: 714 FPTPKSDVYCYGVVLLELITGKKPL 738
P+ D + GV + E++ G+ P
Sbjct: 257 KYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 85/210 (40%), Gaps = 50/210 (23%)
Query: 535 VAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNL 594
VAVK L H + ++ RE+E L ++H N+V G C + +R NL+ +
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR----------NLKLI 94
Query: 595 LHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGC 654
+ LP G L + +HK + + L + C
Sbjct: 95 MEFLPYGS---------------------------LREYLQKHKERIDHIKLLQYTSQIC 127
Query: 655 -------SPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIAR-GSPGYIPPE 706
+ IHRD+ ++ ++ ++ DFGL K+ D+E + PG P
Sbjct: 128 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ--DKEXXKVKEPGESPIF 185
Query: 707 FAQPDSDFPTP---KSDVYCYGVVLLELIT 733
+ P+S + SDV+ +GVVL EL T
Sbjct: 186 WYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 99/245 (40%), Gaps = 46/245 (18%)
Query: 508 SNFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHGSTLTDQEA---ARELEYLGRIKH 563
+F G +L EG F V L A+K+L + + + RE + + R+ H
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 564 PNLVPLTGYCIAGDQRIAI-YDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQ 622
P V L + D+++ Y +NG L I+
Sbjct: 74 PFFVKLY-FTFQDDEKLYFGLSYAKNGEL--------------------------LKYIR 106
Query: 623 NVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFG 682
+GS T + +I AL +LH IIHRD+K ++ L+ ++ +++DFG
Sbjct: 107 KIGSFDETCTRFYTAEIV----SALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG 159
Query: 683 LAKIFGNGLDEEIAR---GSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL- 738
AK+ + A G+ Y+ PE S SD++ G ++ +L+ G P
Sbjct: 160 TAKVLSPESKQARANXFVGTAQYVSPELLTEKS--ACKSSDLWALGCIIYQLVAGLPPFR 217
Query: 739 -GDDY 742
G++Y
Sbjct: 218 AGNEY 222
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 85/210 (40%), Gaps = 50/210 (23%)
Query: 535 VAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNL 594
VAVK L H + ++ RE+E L ++H N+V G C + +R NL+ +
Sbjct: 46 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR----------NLKLI 95
Query: 595 LHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGC 654
+ LP G L + +HK + + L + C
Sbjct: 96 MEYLPYGS---------------------------LRDYLQKHKERIDHIKLLQYTSQIC 128
Query: 655 -------SPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIAR-GSPGYIPPE 706
+ IHRD+ ++ ++ ++ DFGL K+ D+E + PG P
Sbjct: 129 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ--DKEXXKVKEPGESPIF 186
Query: 707 FAQPDSDFPTP---KSDVYCYGVVLLELIT 733
+ P+S + SDV+ +GVVL EL T
Sbjct: 187 WYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 93/237 (39%), Gaps = 40/237 (16%)
Query: 506 ATSNFDRGTLLAEGKFGPVYRGFLPGGIHV-AVKVLVHG---STLTDQEAARELEYLGRI 561
A +F+ G L +GKFG VY + A+KVL + + RE+E +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 562 KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSI 621
+HPN++ L GY + I +Y G + L L +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--------------------SKF 108
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
+ +T A AL++ H S +IHRDIK ++ L E ++++F
Sbjct: 109 DEQRTATYITE----------LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANF 155
Query: 682 GLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
G + + G+ Y+PPE + K D++ GV+ E + GK P
Sbjct: 156 GWS-VHAPSSRRTTLCGTLDYLPPEMI--EGRMHDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 126/324 (38%), Gaps = 64/324 (19%)
Query: 507 TSNFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHG--STLTDQEAARELEYLGRIKH 563
+ N+D L +G F V R G+ A K++ S Q+ RE +++H
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 87
Query: 564 PNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQN 623
PN+V L +D ++ + L+ DL G + ++
Sbjct: 88 PNIVRL-------------HDSIQEESFHYLVFDLVTGGEL----------------FED 118
Query: 624 VGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLE---PRLSD 680
+ + + H I ++A+ H S I+HR++K ++ L + +L+D
Sbjct: 119 IVAREFYSEADASHCIQ-QILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLAD 174
Query: 681 FGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGD 740
FGLA + G+PGY+ PE + D + P D++ GV+L L+ G P D
Sbjct: 175 FGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDP-YSKP-VDIWACGVILYILLVGYPPFWD 232
Query: 741 ---------------DYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALK 785
DYP + + + L+ ++PK R T ++ALK
Sbjct: 233 EDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLI---DSMLTVNPKKRITA-----DQALK 284
Query: 786 IGYLCTADLPLKRPSMQQIVGLLK 809
+ ++C + Q V LK
Sbjct: 285 VPWICNRERVASAIHRQDTVDCLK 308
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 113/281 (40%), Gaps = 50/281 (17%)
Query: 535 VAVKVLVHGSTLTDQEA-ARELEYLGRI-KHPNLVPLTGYCIA-GDQRIAIYDYMENGNL 591
VAVK+L G+T ++ A EL+ L I H N+V L G C G + I ++ + GNL
Sbjct: 62 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 121
Query: 592 QNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTW-RFRHKI--ALGTARALA 648
L N E L + H I + A+ +
Sbjct: 122 STYLR-------------------SKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGME 162
Query: 649 FLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFA 708
FL S IHRD+ A ++ L ++ DFGLA+ D + R +P ++
Sbjct: 163 FL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXK--DPDXVRKGDARLPLKWM 217
Query: 709 QPDSDFP---TPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNLVSWVRGLVRNNKGS 764
P++ F T +SDV+ +GV+L E+ + G P YP G+ + +
Sbjct: 218 APETIFDRVYTIQSDVWSFGVLLWEIFSLGASP----YP------------GVKIDEEFC 261
Query: 765 RAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIV 805
R + R P+ E + C P +RP+ ++V
Sbjct: 262 RRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 302
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 99/245 (40%), Gaps = 46/245 (18%)
Query: 508 SNFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHGSTLTDQEA---ARELEYLGRIKH 563
+F G +L EG F V L A+K+L + + + RE + + R+ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 564 PNLVPLTGYCIAGDQRIAI-YDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQ 622
P V L + D+++ Y +NG L I+
Sbjct: 92 PFFVKLY-FTFQDDEKLYFGLSYAKNGEL--------------------------LKYIR 124
Query: 623 NVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFG 682
+GS T + +I AL +LH IIHRD+K ++ L+ ++ +++DFG
Sbjct: 125 KIGSFDETCTRFYTAEIV----SALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG 177
Query: 683 LAKIFGNGLDEEIAR---GSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL- 738
AK+ + A G+ Y+ PE S SD++ G ++ +L+ G P
Sbjct: 178 TAKVLSPESKQARANXFVGTAQYVSPELLTEKS--ACKSSDLWALGCIIYQLVAGLPPFR 235
Query: 739 -GDDY 742
G++Y
Sbjct: 236 AGNEY 240
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 112/302 (37%), Gaps = 57/302 (18%)
Query: 514 TLLAEGKFGPVYRGFLPGGIHVAVKVLV--HGSTLTDQEAARELEYLGRIKHPNLVPLTG 571
T L E G +++G G + VKVL ST ++ E L HPN++P+ G
Sbjct: 16 TKLNENHSGELWKGRWQGN-DIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLG 74
Query: 572 YCIA--GDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGL 629
C + I + G+L N+LH+ + Q V
Sbjct: 75 ACQSPPAPHPTLITHWXPYGSLYNVLHE---------------GTNFVVDQSQAV----- 114
Query: 630 LTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGN 689
K AL AR AFLH P I + + SV +D + R+S + F
Sbjct: 115 --------KFALDXARGXAFLH-TLEPLIPRHALNSRSVXIDEDXTARISXADVKFSF-- 163
Query: 690 GLDEEIARG-SPGYIPPEFAQPDSDFPTPKS-DVYCYGVVLLELITGKKPLGDDYPEEKE 747
+ R +P ++ PE Q + +S D + + V+L EL+T + P D
Sbjct: 164 ---QSPGRXYAPAWVAPEALQKKPEDTNRRSADXWSFAVLLWELVTREVPFAD------- 213
Query: 748 GNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGL 807
L G + +R T P K+ +C + P KRP IV +
Sbjct: 214 ---------LSNXEIGXKVALEGLRPTIPPGISPHVSKLXKICXNEDPAKRPKFDXIVPI 264
Query: 808 LK 809
L+
Sbjct: 265 LE 266
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 99/245 (40%), Gaps = 46/245 (18%)
Query: 508 SNFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHGSTLTDQEA---ARELEYLGRIKH 563
+F G +L EG F V L A+K+L + + + RE + + R+ H
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 66
Query: 564 PNLVPLTGYCIAGDQRIAI-YDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQ 622
P V L + D+++ Y +NG L I+
Sbjct: 67 PFFVKLY-FTFQDDEKLYFGLSYAKNGEL--------------------------LKYIR 99
Query: 623 NVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFG 682
+GS T + +I AL +LH IIHRD+K ++ L+ ++ +++DFG
Sbjct: 100 KIGSFDETCTRFYTAEIV----SALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG 152
Query: 683 LAKIFGNGLDEEIAR---GSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL- 738
AK+ + A G+ Y+ PE S SD++ G ++ +L+ G P
Sbjct: 153 TAKVLSPESKQARANXFVGTAQYVSPELLTEKS--ACKSSDLWALGCIIYQLVAGLPPFR 210
Query: 739 -GDDY 742
G++Y
Sbjct: 211 AGNEY 215
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 99/245 (40%), Gaps = 46/245 (18%)
Query: 508 SNFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHGSTLTDQEA---ARELEYLGRIKH 563
+F G +L EG F V L A+K+L + + + RE + + R+ H
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 67
Query: 564 PNLVPLTGYCIAGDQRIAI-YDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQ 622
P V L + D+++ Y +NG L I+
Sbjct: 68 PFFVKLY-FTFQDDEKLYFGLSYAKNGEL--------------------------LKYIR 100
Query: 623 NVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFG 682
+GS T + +I AL +LH IIHRD+K ++ L+ ++ +++DFG
Sbjct: 101 KIGSFDETCTRFYTAEIV----SALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG 153
Query: 683 LAKIFGNGLDEEIAR---GSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL- 738
AK+ + A G+ Y+ PE S SD++ G ++ +L+ G P
Sbjct: 154 TAKVLSPESKQARANXFVGTAQYVSPELLTEKS--ACKSSDLWALGCIIYQLVAGLPPFR 211
Query: 739 -GDDY 742
G++Y
Sbjct: 212 AGNEY 216
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 61/111 (54%), Gaps = 16/111 (14%)
Query: 639 IALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIAR- 697
+ L +AL+ LH + +IHRDIK+ S+ L + +LSDFG F + +E+ R
Sbjct: 125 VCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFG----FCAQVSKEVPRR 177
Query: 698 ----GSPGYIPPEFAQPDSDFPT-PKSDVYCYGVVLLELITGKKPLGDDYP 743
G+P ++ PE S P P+ D++ G++++E++ G+ P ++ P
Sbjct: 178 KXLVGTPYWMAPELI---SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP 225
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 61/111 (54%), Gaps = 16/111 (14%)
Query: 639 IALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIAR- 697
+ L +AL+ LH + +IHRDIK+ S+ L + +LSDFG F + +E+ R
Sbjct: 121 VCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFG----FCAQVSKEVPRR 173
Query: 698 ----GSPGYIPPEFAQPDSDFPT-PKSDVYCYGVVLLELITGKKPLGDDYP 743
G+P ++ PE S P P+ D++ G++++E++ G+ P ++ P
Sbjct: 174 KXLVGTPYWMAPELI---SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP 221
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 99/245 (40%), Gaps = 46/245 (18%)
Query: 508 SNFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHGSTLTDQEA---ARELEYLGRIKH 563
+F G +L EG F V L A+K+L + + + RE + + R+ H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 564 PNLVPLTGYCIAGDQRIAI-YDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQ 622
P V L + D+++ Y +NG L I+
Sbjct: 90 PFFVKLY-FTFQDDEKLYFGLSYAKNGEL--------------------------LKYIR 122
Query: 623 NVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFG 682
+GS T + +I AL +LH IIHRD+K ++ L+ ++ +++DFG
Sbjct: 123 KIGSFDETCTRFYTAEIV----SALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG 175
Query: 683 LAKIFGNGLDEEIAR---GSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL- 738
AK+ + A G+ Y+ PE S SD++ G ++ +L+ G P
Sbjct: 176 TAKVLSPESKQARANAFVGTAQYVSPELLTEKS--ACKSSDLWALGCIIYQLVAGLPPFR 233
Query: 739 -GDDY 742
G++Y
Sbjct: 234 AGNEY 238
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 99/245 (40%), Gaps = 46/245 (18%)
Query: 508 SNFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHGSTLTDQEA---ARELEYLGRIKH 563
+F G +L EG F V L A+K+L + + + RE + + R+ H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 564 PNLVPLTGYCIAGDQRIAI-YDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQ 622
P V L + D+++ Y +NG L I+
Sbjct: 90 PFFVKLY-FTFQDDEKLYFGLSYAKNGEL--------------------------LKYIR 122
Query: 623 NVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFG 682
+GS T + +I AL +LH IIHRD+K ++ L+ ++ +++DFG
Sbjct: 123 KIGSFDETCTRFYTAEIV----SALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG 175
Query: 683 LAKIFGNGLDEEIAR---GSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL- 738
AK+ + A G+ Y+ PE S SD++ G ++ +L+ G P
Sbjct: 176 TAKVLSPESKQARANXFVGTAQYVSPELLTEKS--ACKSSDLWALGCIIYQLVAGLPPFR 233
Query: 739 -GDDY 742
G++Y
Sbjct: 234 AGNEY 238
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 99/245 (40%), Gaps = 46/245 (18%)
Query: 508 SNFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHGSTLTDQEA---ARELEYLGRIKH 563
+F G +L EG F V L A+K+L + + + RE + + R+ H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 564 PNLVPLTGYCIAGDQRIAI-YDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQ 622
P V L + D+++ Y +NG L I+
Sbjct: 90 PFFVKLY-FTFQDDEKLYFGLSYAKNGEL--------------------------LKYIR 122
Query: 623 NVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFG 682
+GS T + +I AL +LH IIHRD+K ++ L+ ++ +++DFG
Sbjct: 123 KIGSFDETCTRFYTAEIV----SALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG 175
Query: 683 LAKIFGNGLDEEIAR---GSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL- 738
AK+ + A G+ Y+ PE S SD++ G ++ +L+ G P
Sbjct: 176 TAKVLSPESKQARANXFVGTAQYVSPELLTEKS--ACKSSDLWALGCIIYQLVAGLPPFR 233
Query: 739 -GDDY 742
G++Y
Sbjct: 234 AGNEY 238
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 99/245 (40%), Gaps = 46/245 (18%)
Query: 508 SNFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHGSTLTDQEA---ARELEYLGRIKH 563
+F G +L EG F V L A+K+L + + + RE + + R+ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 564 PNLVPLTGYCIAGDQRIAI-YDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQ 622
P V L + D+++ Y +NG L I+
Sbjct: 92 PFFVKLY-FTFQDDEKLYFGLSYAKNGEL--------------------------LKYIR 124
Query: 623 NVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFG 682
+GS T + +I AL +LH IIHRD+K ++ L+ ++ +++DFG
Sbjct: 125 KIGSFDETCTRFYTAEIV----SALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG 177
Query: 683 LAKIFGNGLDEEIAR---GSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL- 738
AK+ + A G+ Y+ PE S SD++ G ++ +L+ G P
Sbjct: 178 TAKVLSPESKQARANXFVGTAQYVSPELLTEKS--ACKSSDLWALGCIIYQLVAGLPPFR 235
Query: 739 -GDDY 742
G++Y
Sbjct: 236 AGNEY 240
>pdb|3V47|A Chain A, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
pdb|3V47|B Chain B, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
Length = 455
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 150/358 (41%), Gaps = 39/358 (10%)
Query: 46 DTTIGKLSKLQSLDLSENN--ITALPSDLWSLGSLKSLNLSYNRISGSLPSNIGNFGLLE 103
+T+ +L LQ L + + + + L SL L L YN+ LE
Sbjct: 47 ETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLE 106
Query: 104 VFDLSNNNFSGEIPAA--ISSLVSLRVLKL-DGNMFQWSIPPGLLNCQSLVTVDLSMNQL 160
V L+ N G + + L SL +L L D N+ + LN + +DL+ N++
Sbjct: 107 VLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKV 166
Query: 161 NGSLPDGF----GAAFPKLKSLNLAGNEIKGRDTHFAGLK---------SITNLNISGNL 207
+ G F L+ L+ ++ + ++ G + SIT L++SGN
Sbjct: 167 KSICEEDLLNFQGKHFTLLR---LSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNG 223
Query: 208 FQGSVMGVFLESLEVIDLR----SNQFQ--GHISQVQFNSSYNW-------SRLVYVDLS 254
F+ S+ F +++ ++ SN + F N+ S + DLS
Sbjct: 224 FKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLS 283
Query: 255 ENQLSGEIFHNFSQAQNLKHLSLAYNRFTRQEFPQIGTLLGLEHLNLSRTSLIGDIPSEI 314
++++ + FS +L+ L+LA N + + L L LNLS+ + +G I S +
Sbjct: 284 KSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQ-NFLGSIDSRM 342
Query: 315 LQ-LSSLHTLDLSMNHLT--GQIPTVSAKNLGIIDMSHNNLSGEIPASLLEKLPQMER 369
+ L L LDLS NH+ G + NL + + N L +P + ++L +++
Sbjct: 343 FENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKS-VPDGIFDRLTSLQK 399
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 65/147 (44%), Gaps = 16/147 (10%)
Query: 22 VCDSNKQHVTDFLASNSGLSGSVPDTTIGKLSKLQSLDLSENNITALPSD-LWSLGSLKS 80
CD +K + L S + L+ L L++N I + + W L L
Sbjct: 279 TCDLSKSKIFALLKS-----------VFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLK 327
Query: 81 LNLSYNRISGSLPSNI-GNFGLLEVFDLSNNNFSGEIPAAISSLVSLRVLKLDGNMFQWS 139
LNLS N + GS+ S + N LEV DLS N+ + L +L+ L LD N + S
Sbjct: 328 LNLSQNFL-GSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLK-S 385
Query: 140 IPPGLLN-CQSLVTVDLSMNQLNGSLP 165
+P G+ + SL + L N + S P
Sbjct: 386 VPDGIFDRLTSLQKIWLHTNPWDCSCP 412
Score = 30.0 bits (66), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 118/303 (38%), Gaps = 33/303 (10%)
Query: 52 LSKLQSLDLSENNITAL-PSDLW-SLGSLKSLNLSYNRISGSLPSNIGNFGLLEVFDLSN 109
L+ L+ L L +NNI + P+ + ++ L+L++N++ ++ NF
Sbjct: 128 LTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNF--------QG 179
Query: 110 NNFSGEIPAAISSLVSLRVLKLDGNMFQWSIPPGLLNCQSLVTVDLSMNQLNGSLPDGFG 169
+F+ + L S+ + ++ W S+ T+DLS N S+ F
Sbjct: 180 KHFT------LLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFF 233
Query: 170 AAFP--KLKSLNLAGNEIKGRDTHFAGLKSITNLNISGNLFQGSVMGVFLESLEVIDLRS 227
A K++SL L+ + G K N G L V L ++ L
Sbjct: 234 DAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKG-LEASGVKTCDLSKSKIFALLK 292
Query: 228 NQF------------QGHISQVQFNSSYNWSRLVYVDLSENQLSGEIFHNFSQAQNLKHL 275
+ F Q I+++ N+ + + L+ ++LS+N L F L+ L
Sbjct: 293 SVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVL 352
Query: 276 SLAYNRFTRQEFPQIGTLLGLEHLNLSRTSLIGDIPSEIL-QLSSLHTLDLSMNHLTGQI 334
L+YN L L+ L L T+ + +P I +L+SL + L N
Sbjct: 353 DLSYNHIRALGDQSFLGLPNLKELALD-TNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 411
Query: 335 PTV 337
P +
Sbjct: 412 PRI 414
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 61/111 (54%), Gaps = 16/111 (14%)
Query: 639 IALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIAR- 697
+ L +AL+ LH + +IHRDIK+ S+ L + +LSDFG F + +E+ R
Sbjct: 132 VCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFG----FCAQVSKEVPRR 184
Query: 698 ----GSPGYIPPEFAQPDSDFPT-PKSDVYCYGVVLLELITGKKPLGDDYP 743
G+P ++ PE S P P+ D++ G++++E++ G+ P ++ P
Sbjct: 185 KXLVGTPYWMAPELI---SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP 232
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 90/234 (38%), Gaps = 40/234 (17%)
Query: 509 NFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHGSTL---TDQEAARELEYLGRIKHP 564
+F+ G L +GKFG VY VA+KVL + + RE+E + HP
Sbjct: 24 DFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHP 83
Query: 565 NLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNV 624
N++ L Y + I +Y G L L
Sbjct: 84 NILRLYNYFYDRRRIYLILEYAPRGELYKELQK------------------------SCT 119
Query: 625 GSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLA 684
E T I A AL + H +IHRDIK ++ L + E +++DFG +
Sbjct: 120 FDEQRTAT------IMEELADALMYCH---GKKVIHRDIKPENLLLGLKGELKIADFGWS 170
Query: 685 KIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
+ L + G+ Y+PPE + K D++C GV+ EL+ G P
Sbjct: 171 -VHAPSLRRKTMCGTLDYLPPEMI--EGRMHNEKVDLWCIGVLCYELLVGNPPF 221
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 99/245 (40%), Gaps = 46/245 (18%)
Query: 508 SNFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHGSTLTDQEA---ARELEYLGRIKH 563
+F G +L EG F V L A+K+L + + + RE + + R+ H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 564 PNLVPLTGYCIAGDQRIAI-YDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQ 622
P V L + D+++ Y +NG L I+
Sbjct: 93 PFFVKLY-FTFQDDEKLYFGLSYAKNGEL--------------------------LKYIR 125
Query: 623 NVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFG 682
+GS T + +I AL +LH IIHRD+K ++ L+ ++ +++DFG
Sbjct: 126 KIGSFDETCTRFYTAEIV----SALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG 178
Query: 683 LAKIFGNGLDEEIAR---GSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL- 738
AK+ + A G+ Y+ PE S SD++ G ++ +L+ G P
Sbjct: 179 TAKVLSPESKQARANSFVGTAQYVSPELLTEKS--ACKSSDLWALGCIIYQLVAGLPPFR 236
Query: 739 -GDDY 742
G++Y
Sbjct: 237 AGNEY 241
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 51/83 (61%), Gaps = 5/83 (6%)
Query: 658 IIHRDIKASSVYLDMNLEPRLSDFGLA-KIFGNGLDEEIARGSPGYIPPE-FAQPDSDFP 715
+IHRD+K +++L+ +LE ++ DFGLA K+ +G +++ G+P YI PE ++ F
Sbjct: 136 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSF- 194
Query: 716 TPKSDVYCYGVVLLELITGKKPL 738
+ DV+ G ++ L+ GK P
Sbjct: 195 --EVDVWSIGCIMYTLLVGKPPF 215
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 61/111 (54%), Gaps = 16/111 (14%)
Query: 639 IALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIAR- 697
+ L +AL+ LH + +IHRDIK+ S+ L + +LSDFG F + +E+ R
Sbjct: 130 VCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFG----FCAQVSKEVPRR 182
Query: 698 ----GSPGYIPPEFAQPDSDFPT-PKSDVYCYGVVLLELITGKKPLGDDYP 743
G+P ++ PE S P P+ D++ G++++E++ G+ P ++ P
Sbjct: 183 KXLVGTPYWMAPELI---SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP 230
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 57/102 (55%), Gaps = 4/102 (3%)
Query: 638 KIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIAR 697
KIA+ +AL LH S +IHRD+K S+V ++ + ++ DFG++ + + ++I
Sbjct: 113 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA 170
Query: 698 GSPGYIPPEFAQPDSDFP--TPKSDVYCYGVVLLELITGKKP 737
G Y+ PE P+ + + KSD++ G+ ++EL + P
Sbjct: 171 GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFP 212
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 99/245 (40%), Gaps = 46/245 (18%)
Query: 508 SNFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHGSTLTDQEA---ARELEYLGRIKH 563
+F G +L EG F V L A+K+L + + + RE + + R+ H
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 68
Query: 564 PNLVPLTGYCIAGDQRIAI-YDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQ 622
P V L + D+++ Y +NG L I+
Sbjct: 69 PFFVKLY-FTFQDDEKLYFGLSYAKNGEL--------------------------LKYIR 101
Query: 623 NVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFG 682
+GS T + +I AL +LH IIHRD+K ++ L+ ++ +++DFG
Sbjct: 102 KIGSFDETCTRFYTAEIV----SALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG 154
Query: 683 LAKIFGNGLDEEIAR---GSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL- 738
AK+ + A G+ Y+ PE S SD++ G ++ +L+ G P
Sbjct: 155 TAKVLSPESKQARANXFVGTAQYVSPELLTEKS--ACKSSDLWALGCIIYQLVAGLPPFR 212
Query: 739 -GDDY 742
G++Y
Sbjct: 213 AGNEY 217
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 100/240 (41%), Gaps = 63/240 (26%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRI--KHPNLVPLTGYC 573
+ +G+FG V+RG G VAVK+ S+ ++ RE E + +H N++
Sbjct: 17 IGKGRFGEVWRGKWRGE-EVAVKIF---SSREERSWFREAEIYQTVMLRHENILGF---- 68
Query: 574 IAGD--------QRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVG 625
IA D Q + DY E+G+L + L+ + V
Sbjct: 69 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV----------------------- 105
Query: 626 SEGLLTTWRFRHKIALGTARALAFLHHGC-----SPPIIHRDIKASSVYLDMNLEPRLSD 680
EG++ K+AL TA LA LH P I HRD+K+ ++ + N ++D
Sbjct: 106 -EGMI-------KLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 157
Query: 681 FGLAKIFGNGLDE-EIA----RGSPGYIPPEFAQPDSDFPT----PKSDVYCYGVVLLEL 731
GLA + D +IA G+ Y+ PE + ++D+Y G+V E+
Sbjct: 158 LGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 100/240 (41%), Gaps = 63/240 (26%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRI--KHPNLVPLTGYC 573
+ +G+FG V+RG G VAVK+ S+ ++ RE E + +H N++
Sbjct: 11 IGKGRFGEVWRGKWRGE-EVAVKIF---SSREERSWFREAEIYQTVMLRHENILGF---- 62
Query: 574 IAGD--------QRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVG 625
IA D Q + DY E+G+L + L+ + V
Sbjct: 63 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV----------------------- 99
Query: 626 SEGLLTTWRFRHKIALGTARALAFLHHGC-----SPPIIHRDIKASSVYLDMNLEPRLSD 680
EG++ K+AL TA LA LH P I HRD+K+ ++ + N ++D
Sbjct: 100 -EGMI-------KLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 151
Query: 681 FGLAKIFGNGLDE-EIA----RGSPGYIPPEFAQPDSDFPT----PKSDVYCYGVVLLEL 731
GLA + D +IA G+ Y+ PE + ++D+Y G+V E+
Sbjct: 152 LGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 659 IHRDIKASSVYLDMNLEPRLSDFG-LAKIFGNG-LDEEIARGSPGYIPPEFAQP---DSD 713
+HRDIK ++ +DMN RL+DFG K+ +G + +A G+P YI PE Q
Sbjct: 197 VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKG 256
Query: 714 FPTPKSDVYCYGVVLLELITGKKPL 738
P+ D + GV + E++ G+ P
Sbjct: 257 RYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 99/245 (40%), Gaps = 46/245 (18%)
Query: 508 SNFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHGSTLTDQEA---ARELEYLGRIKH 563
+F G +L EG F V L A+K+L + + + RE + + R+ H
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 564 PNLVPLTGYCIAGDQRIAI-YDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQ 622
P V L + D+++ Y +NG L I+
Sbjct: 95 PFFVKLY-FTFQDDEKLYFGLSYAKNGEL--------------------------LKYIR 127
Query: 623 NVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFG 682
+GS T + +I AL +LH IIHRD+K ++ L+ ++ +++DFG
Sbjct: 128 KIGSFDETCTRFYTAEIV----SALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG 180
Query: 683 LAKIFGNGLDEEIAR---GSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL- 738
AK+ + A G+ Y+ PE S SD++ G ++ +L+ G P
Sbjct: 181 TAKVLSPESKQARANXFVGTAQYVSPELLTEKS--ACKSSDLWALGCIIYQLVAGLPPFR 238
Query: 739 -GDDY 742
G++Y
Sbjct: 239 AGNEY 243
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 100/245 (40%), Gaps = 46/245 (18%)
Query: 508 SNFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHGSTLTDQEA---ARELEYLGRIKH 563
+F G +L EG F V L A+K+L + + + RE + + R+ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 564 PNLVPLTGYCIAGDQRIAI-YDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQ 622
P V L + D+++ Y +NG L I+
Sbjct: 92 PFFVKLY-FTFQDDEKLYFGLSYAKNGCL--------------------------LKYIR 124
Query: 623 NVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFG 682
+GS T + +I AL +LH IIHRD+K ++ L+ ++ +++DFG
Sbjct: 125 KIGSFDETCTRFYTAEIV----SALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG 177
Query: 683 LAKIFGNGLDEEIAR---GSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL- 738
AK+ + A G+ Y+ PE S + SD++ G ++ +L+ G P
Sbjct: 178 TAKVLSPESKQARANSFVGTAQYVSPELLTEKS--ASKSSDLWALGCIIYQLVAGLPPFR 235
Query: 739 -GDDY 742
G++Y
Sbjct: 236 AGNEY 240
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 100/240 (41%), Gaps = 63/240 (26%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRI--KHPNLVPLTGYC 573
+ +G+FG V+RG G VAVK+ S+ ++ RE E + +H N++
Sbjct: 12 IGKGRFGEVWRGKWRGE-EVAVKIF---SSREERSWFREAEIYQTVMLRHENILGF---- 63
Query: 574 IAGD--------QRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVG 625
IA D Q + DY E+G+L + L+ + V
Sbjct: 64 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV----------------------- 100
Query: 626 SEGLLTTWRFRHKIALGTARALAFLHHGC-----SPPIIHRDIKASSVYLDMNLEPRLSD 680
EG++ K+AL TA LA LH P I HRD+K+ ++ + N ++D
Sbjct: 101 -EGMI-------KLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 152
Query: 681 FGLAKIFGNGLDE-EIA----RGSPGYIPPEFAQPDSDFPT----PKSDVYCYGVVLLEL 731
GLA + D +IA G+ Y+ PE + ++D+Y G+V E+
Sbjct: 153 LGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Query: 646 ALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKI-FGNGLDEEIARGSPGYIP 704
AL FLH II+RD+K +V LD +L+DFG+ K NG+ G+P YI
Sbjct: 136 ALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIA 192
Query: 705 PEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
PE Q P D + GV+L E++ G P
Sbjct: 193 PEILQ--EMLYGPAVDWWAMGVLLYEMLCGHAPF 224
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 99/245 (40%), Gaps = 46/245 (18%)
Query: 508 SNFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHGSTLTDQEA---ARELEYLGRIKH 563
+F G +L EG F V L A+K+L + + + RE + + R+ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 564 PNLVPLTGYCIAGDQRIAI-YDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQ 622
P V L + D+++ Y +NG L I+
Sbjct: 92 PFFVKLY-FTFQDDEKLYFGLSYAKNGEL--------------------------LKYIR 124
Query: 623 NVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFG 682
+GS T + +I AL +LH IIHRD+K ++ L+ ++ +++DFG
Sbjct: 125 KIGSFDETCTRFYTAEIV----SALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG 177
Query: 683 LAKIFGNGLDEEIAR---GSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL- 738
AK+ + A G+ Y+ PE S SD++ G ++ +L+ G P
Sbjct: 178 TAKVLSPESKQARANXFVGTAQYVSPELLTEKS--ACKSSDLWALGCIIYQLVAGLPPFR 235
Query: 739 -GDDY 742
G++Y
Sbjct: 236 AGNEY 240
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 51/83 (61%), Gaps = 5/83 (6%)
Query: 658 IIHRDIKASSVYLDMNLEPRLSDFGLA-KIFGNGLDEEIARGSPGYIPPE-FAQPDSDFP 715
+IHRD+K +++L+ +LE ++ DFGLA K+ +G +++ G+P YI PE ++ F
Sbjct: 160 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSF- 218
Query: 716 TPKSDVYCYGVVLLELITGKKPL 738
+ DV+ G ++ L+ GK P
Sbjct: 219 --EVDVWSIGCIMYTLLVGKPPF 239
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 100/240 (41%), Gaps = 63/240 (26%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRI--KHPNLVPLTGYC 573
+ +G+FG V+RG G VAVK+ S+ ++ RE E + +H N++
Sbjct: 37 IGKGRFGEVWRGKWRGE-EVAVKIF---SSREERSWFREAEIYQTVMLRHENILGF---- 88
Query: 574 IAGD--------QRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVG 625
IA D Q + DY E+G+L + L+ + V
Sbjct: 89 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV----------------------- 125
Query: 626 SEGLLTTWRFRHKIALGTARALAFLHHGC-----SPPIIHRDIKASSVYLDMNLEPRLSD 680
EG++ K+AL TA LA LH P I HRD+K+ ++ + N ++D
Sbjct: 126 -EGMI-------KLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 177
Query: 681 FGLAKIFGNGLDE-EIA----RGSPGYIPPEFAQPDSDFPT----PKSDVYCYGVVLLEL 731
GLA + D +IA G+ Y+ PE + ++D+Y G+V E+
Sbjct: 178 LGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 99/245 (40%), Gaps = 46/245 (18%)
Query: 508 SNFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHGSTLTDQEA---ARELEYLGRIKH 563
+F G +L EG F V L A+K+L + + + RE + + R+ H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 564 PNLVPLTGYCIAGDQRIAI-YDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQ 622
P V L + D+++ Y +NG L I+
Sbjct: 93 PFFVKLY-FTFQDDEKLYFGLSYAKNGEL--------------------------LKYIR 125
Query: 623 NVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFG 682
+GS T + +I AL +LH IIHRD+K ++ L+ ++ +++DFG
Sbjct: 126 KIGSFDETCTRFYTAEIV----SALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG 178
Query: 683 LAKIFGNGLDEEIAR---GSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL- 738
AK+ + A G+ Y+ PE S SD++ G ++ +L+ G P
Sbjct: 179 TAKVLSPESKQARANXFVGTAQYVSPELLTEKS--ACKSSDLWALGCIIYQLVAGLPPFR 236
Query: 739 -GDDY 742
G++Y
Sbjct: 237 AGNEY 241
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 99/245 (40%), Gaps = 46/245 (18%)
Query: 508 SNFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHGSTLTDQEA---ARELEYLGRIKH 563
+F G +L EG F V L A+K+L + + + RE + + R+ H
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 69
Query: 564 PNLVPLTGYCIAGDQRIAI-YDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQ 622
P V L + D+++ Y +NG L I+
Sbjct: 70 PFFVKLY-FTFQDDEKLYFGLSYAKNGEL--------------------------LKYIR 102
Query: 623 NVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFG 682
+GS T + +I AL +LH IIHRD+K ++ L+ ++ +++DFG
Sbjct: 103 KIGSFDETCTRFYTAEIV----SALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG 155
Query: 683 LAKIFGNGLDEEIAR---GSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL- 738
AK+ + A G+ Y+ PE S SD++ G ++ +L+ G P
Sbjct: 156 TAKVLSPESKQARANXFVGTAQYVSPELLTEKS--ACKSSDLWALGCIIYQLVAGLPPFR 213
Query: 739 -GDDY 742
G++Y
Sbjct: 214 AGNEY 218
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 114/283 (40%), Gaps = 52/283 (18%)
Query: 535 VAVKVLVHGSTLTDQEA-ARELEYLGRI-KHPNLVPLTGYCIA-GDQRIAIYDYMENGNL 591
VAVK+L G+T ++ A EL+ L I H N+V L G C G + I ++ + GNL
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 110
Query: 592 QNLLHDLPLGVQXXXXXXXXXXXXXXXNSI--QNVGSEGLLTTW-RFRHKI--ALGTARA 646
L N V E L + H I + A+
Sbjct: 111 STYLRS-------------------KRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKG 151
Query: 647 LAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPE 706
+ FL S IHRD+ A ++ L ++ DFGLA+ D + R +P +
Sbjct: 152 MEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXK--DPDXVRKGDARLPLK 206
Query: 707 FAQPDSDFP---TPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNLVSWVRGLVRNNK 762
+ P++ F T +SDV+ +GV+L E+ + G P YP G+ + +
Sbjct: 207 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP----YP------------GVKIDEE 250
Query: 763 GSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIV 805
R + R P+ E + C P +RP+ ++V
Sbjct: 251 FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 293
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 51/83 (61%), Gaps = 5/83 (6%)
Query: 658 IIHRDIKASSVYLDMNLEPRLSDFGLA-KIFGNGLDEEIARGSPGYIPPE-FAQPDSDFP 715
+IHRD+K +++L+ +LE ++ DFGLA K+ +G +++ G+P YI PE ++ F
Sbjct: 162 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSF- 220
Query: 716 TPKSDVYCYGVVLLELITGKKPL 738
+ DV+ G ++ L+ GK P
Sbjct: 221 --EVDVWSIGCIMYTLLVGKPPF 241
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 100/240 (41%), Gaps = 63/240 (26%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRI--KHPNLVPLTGYC 573
+ +G+FG V+RG G VAVK+ S+ ++ RE E + +H N++
Sbjct: 14 IGKGRFGEVWRGKWRGE-EVAVKIF---SSREERSWFREAEIYQTVMLRHENILGF---- 65
Query: 574 IAGD--------QRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVG 625
IA D Q + DY E+G+L + L+ + V
Sbjct: 66 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV----------------------- 102
Query: 626 SEGLLTTWRFRHKIALGTARALAFLHHGC-----SPPIIHRDIKASSVYLDMNLEPRLSD 680
EG++ K+AL TA LA LH P I HRD+K+ ++ + N ++D
Sbjct: 103 -EGMI-------KLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 154
Query: 681 FGLAKIFGNGLDE-EIA----RGSPGYIPPEFAQPDSDFPT----PKSDVYCYGVVLLEL 731
GLA + D +IA G+ Y+ PE + ++D+Y G+V E+
Sbjct: 155 LGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|3CIG|A Chain A, Crystal Structure Of Mouse Tlr3 Ectodomain
pdb|3CIY|A Chain A, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
pdb|3CIY|B Chain B, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
Length = 697
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 157/359 (43%), Gaps = 46/359 (12%)
Query: 48 TIGKLSKLQSLDLSENNITALPSDLWSLG--SLKSLNLSYNRISGSLPSNIGNFGL--LE 103
TIGKL L L+ ++ N W L S+++L+L+ N++ + S L
Sbjct: 193 TIGKLFALL-LNNAQLNPHLTEKLCWELSNTSIQNLSLANNQLLATSESTFSGLKWTNLT 251
Query: 104 VFDLSNNNFSGEIPAAISSLVSLRVLKLDGNMFQWSIPPGLLNCQSLVTVDLSMNQLNGS 163
DLS NN + S L SLR L L+ N Q P +L + L S
Sbjct: 252 QLDLSYNNLHDVGNGSFSYLPSLRYLSLEYNNIQRLSPRSFYGLSNLRYLSLKRAFTKQS 311
Query: 164 LP-------DGFGAAFPK-LKSLNLAGNEIKGRDTH-FAGLKSITNLNISGNL--FQGSV 212
+ D F + K L+ LN+ N I ++ F GL S+ L++S Q
Sbjct: 312 VSLASHPNIDDFSFQWLKYLEYLNMDDNNIPSTKSNTFTGLVSLKYLSLSKTFTSLQTLT 371
Query: 213 MGVFLESLEVIDLRSNQFQGHISQVQFNSSYNW-SRLVYVDLS----ENQLSGEIFHNFS 267
F+ L N + HIS++ N +++W +L +DL E +LSG+ +
Sbjct: 372 NETFVSLAHSPLLTLNLTKNHISKIA-NGTFSWLGQLRILDLGLNEIEQKLSGQEWRGL- 429
Query: 268 QAQNLKHLSLAYNRFTRQEFPQIGTLLGLEHLNLSRTSLIGDIPSEILQLSSLHTLDLSM 327
+N+ + L+YN++ + L+ S +L+ + +L+ +L +D+S
Sbjct: 430 --RNIFEIYLSYNKYLQ--------------LSTSSFALVPSLQRLMLRRVALKNVDISP 473
Query: 328 NHLTGQIPTVSAKNLGIIDMSHNNLSGEIPASLLEKLPQMERFNFSYNNLTLCASELSP 386
+ P +NL I+D+S+NN++ I LLE L +E +F +NNL +P
Sbjct: 474 S------PFRPLRNLTILDLSNNNIAN-INEDLLEGLENLEILDFQHNNLARLWKRANP 525
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 117/300 (39%), Gaps = 59/300 (19%)
Query: 59 DLSENNITALPSDLWSLGSLKSLNLSYNRISGSLPSNIGNFGLLEVFDLSNNNFSGEIPA 118
D S +T +P DL S ++ LNL++N++ P+N + L + D N+ S P
Sbjct: 10 DCSHLKLTHIPDDLPS--NITVLNLTHNQLRRLPPTNFTRYSQLAILDAGFNSISKLEPE 67
Query: 119 AISSLVSLRVLKLDGNMFQWSIPPGLLNCQSLVTVDLSMNQL------------------ 160
L L+VL L N + C +L +DL N +
Sbjct: 68 LCQILPLLKVLNLQHNELSQISDQTFVFCTNLTELDLMSNSIHKIKSNPFKNQKNLIKLD 127
Query: 161 ---NG--SLPDGFGAAFPKLKSLNLAGNEI---KGRDTHFAGLKSITNLNISGN------ 206
NG S G G L+ L LA N+I + + F G S+ L++S N
Sbjct: 128 LSHNGLSSTKLGTGVQLENLQELLLAKNKILALRSEELEFLGNSSLRKLDLSSNPLKEFS 187
Query: 207 --LFQ--GSVMGVFLE-------------------SLEVIDLRSNQFQGHISQVQFNSSY 243
FQ G + + L S++ + L +NQ S+ F S
Sbjct: 188 PGCFQTIGKLFALLLNNAQLNPHLTEKLCWELSNTSIQNLSLANNQLLA-TSESTF-SGL 245
Query: 244 NWSRLVYVDLSENQLSGEIFHNFSQAQNLKHLSLAYNRFTRQEFPQIGTLLGLEHLNLSR 303
W+ L +DLS N L +FS +L++LSL YN R L L +L+L R
Sbjct: 246 KWTNLTQLDLSYNNLHDVGNGSFSYLPSLRYLSLEYNNIQRLSPRSFYGLSNLRYLSLKR 305
Score = 33.5 bits (75), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 53/112 (47%), Gaps = 4/112 (3%)
Query: 246 SRLVYVDLSENQLSGEIFHNFSQAQNLKHLSLAYNRFTRQEFPQIGTLLGL-EHLNLSRT 304
S + ++L+ NQL NF++ L L +N ++ E P++ +L L + LNL
Sbjct: 25 SNITVLNLTHNQLRRLPPTNFTRYSQLAILDAGFNSISKLE-PELCQILPLLKVLNLQHN 83
Query: 305 SLIGDIPSEILQLSSLHTLDLSMN--HLTGQIPTVSAKNLGIIDMSHNNLSG 354
L + ++L LDL N H P + KNL +D+SHN LS
Sbjct: 84 ELSQISDQTFVFCTNLTELDLMSNSIHKIKSNPFKNQKNLIKLDLSHNGLSS 135
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 99/245 (40%), Gaps = 46/245 (18%)
Query: 508 SNFDRGTLLAEGKFGP-VYRGFLPGGIHVAVKVLVHGSTLTDQEA---ARELEYLGRIKH 563
+F G +L EG F V L A+K+L + + + RE + + R+ H
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 564 PNLVPLTGYCIAGDQRIAI-YDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQ 622
P V L + D+++ Y +NG L I+
Sbjct: 90 PFFVKLY-FTFQDDEKLYFGLSYAKNGEL--------------------------LKYIR 122
Query: 623 NVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFG 682
+GS T + +I AL +LH IIHRD+K ++ L+ ++ +++DFG
Sbjct: 123 KIGSFDETCTRFYTAEIV----SALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG 175
Query: 683 LAKIFGNGLDEEIAR---GSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL- 738
AK+ + A G+ Y+ PE S SD++ G ++ +L+ G P
Sbjct: 176 TAKVLSPESKQARANXFVGTAQYVSPELLTEKS--ACKSSDLWALGCIIYQLVAGLPPFR 233
Query: 739 -GDDY 742
G++Y
Sbjct: 234 AGNEY 238
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 75/163 (46%), Gaps = 29/163 (17%)
Query: 621 IQNVGSEGLLTTWRFRHKIALGTARALAF-LHHGCSPPIIHRDIKASSVYLDMNLEPRLS 679
IQ VG RF+ A+ A +A L S II+RD+K +V LD +++
Sbjct: 112 IQQVG--------RFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIA 163
Query: 680 DFGLAKI-FGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKS-DVYCYGVVLLELITGKKP 737
DFG+ K +G+ + G+P YI PE P KS D + +GV+L E++ G+ P
Sbjct: 164 DFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQ---PYGKSVDWWAFGVLLYEMLAGQAP 220
Query: 738 L-GDD--------------YPEEKEGNLVSWVRGLVRNNKGSR 765
G+D YP+ V+ +GL+ + G R
Sbjct: 221 FEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMTKHPGKR 263
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 114/283 (40%), Gaps = 52/283 (18%)
Query: 535 VAVKVLVHGSTLTDQEA-ARELEYLGRI-KHPNLVPLTGYCIA-GDQRIAIYDYMENGNL 591
VAVK+L G+T ++ A EL+ L I H N+V L G C G + I ++ + GNL
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNL 110
Query: 592 QNLLHDLPLGVQXXXXXXXXXXXXXXXNSI--QNVGSEGLLTTW-RFRHKI--ALGTARA 646
L N V E L + H I + A+
Sbjct: 111 STYLR-------------------SKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKG 151
Query: 647 LAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPE 706
+ FL S IHRD+ A ++ L ++ DFGLA+ D + R +P +
Sbjct: 152 MEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXK--DPDXVRKGDARLPLK 206
Query: 707 FAQPDSDFP---TPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNLVSWVRGLVRNNK 762
+ P++ F T +SDV+ +GV+L E+ + G P YP G+ + +
Sbjct: 207 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP----YP------------GVKIDEE 250
Query: 763 GSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIV 805
R + R P+ E + C P +RP+ ++V
Sbjct: 251 FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 293
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 59/103 (57%), Gaps = 12/103 (11%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIAR----GSP 700
+ L +LH S IHRDIKA++V L + E +L+DFG+A G D +I R G+P
Sbjct: 115 KGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVA---GQLTDTQIKRNTFVGTP 168
Query: 701 GYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYP 743
++ PE + S + + K+D++ G+ +EL G+ P + +P
Sbjct: 169 FWMAPEVIK-QSAYDS-KADIWSLGITAIELARGEPPHSELHP 209
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 61/111 (54%), Gaps = 16/111 (14%)
Query: 639 IALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIAR- 697
+ L +AL+ LH + +IHRDIK+ S+ L + +LSDFG F + +E+ R
Sbjct: 175 VCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFG----FCAQVSKEVPRR 227
Query: 698 ----GSPGYIPPEFAQPDSDFPT-PKSDVYCYGVVLLELITGKKPLGDDYP 743
G+P ++ PE S P P+ D++ G++++E++ G+ P ++ P
Sbjct: 228 KXLVGTPYWMAPELI---SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP 275
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 128/314 (40%), Gaps = 66/314 (21%)
Query: 513 GTLLAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAA--RELEYLGRIKHPNLVPLT 570
G L+ +G+FG VY G G VA++++ DQ A RE+ + +H N+V
Sbjct: 38 GELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFM 95
Query: 571 GYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLL 630
G C++ I + L +++ D + + N + + E
Sbjct: 96 GACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDV--------------NKTRQIAQE--- 138
Query: 631 TTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFG-- 688
+ + +LH + I+H+D+K+ +V+ D N + ++DFGL I G
Sbjct: 139 ------------IVKGMGYLH---AKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVL 182
Query: 689 -NGLDEEIARGSPGY---IPPEFAQ---PDSD---FPTPK-SDVYCYGVVLLELITGKKP 737
G E+ R G+ + PE + PD++ P K SDV+ G + EL + P
Sbjct: 183 QAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWP 242
Query: 738 LGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLK 797
+ + + W G + P + G K++ + L C A +
Sbjct: 243 F-----KTQPAEAIIWQMGT--------GMKPNLSQIGMGKEISDIL---LFCWAFEQEE 286
Query: 798 RPSMQQIVGLLKDI 811
RP+ +++ +L+ +
Sbjct: 287 RPTFTKLMDMLEKL 300
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 53/117 (45%), Gaps = 15/117 (12%)
Query: 638 KIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNG------- 690
KI T RA+ +H PPIIHRD+K ++ L +L DFG A +
Sbjct: 140 KIFYQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSA 198
Query: 691 -----LDEEIARG-SPGYIPPEFAQPDSDFPT-PKSDVYCYGVVLLELITGKKPLGD 740
++EEI R +P Y PE S+FP K D++ G +L L + P D
Sbjct: 199 QRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFED 255
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 88/217 (40%), Gaps = 50/217 (23%)
Query: 532 GIHVAVKVLVHGSTLTDQEAAR---ELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMEN 588
G + A+KVL + ++ E L + HP ++ + G Q I DY+E
Sbjct: 31 GRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEG 90
Query: 589 GNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWRFRHKIALGTAR--- 645
G L +LL + RF + +A A
Sbjct: 91 GELFSLLR----------------------------------KSQRFPNPVAKFYAAEVC 116
Query: 646 -ALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIP 704
AL +LH S II+RD+K ++ LD N +++DFG AK + G+P YI
Sbjct: 117 LALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV--TYXLCGTPDYIA 171
Query: 705 PEFAQPDSDFPTPKS-DVYCYGVVLLELITGKKPLGD 740
PE S P KS D + +G+++ E++ G P D
Sbjct: 172 PEVV---STKPYNKSIDWWSFGILIYEMLAGYTPFYD 205
>pdb|3B2D|A Chain A, Crystal Structure Of Human Rp105MD-1 Complex
pdb|3B2D|B Chain B, Crystal Structure Of Human Rp105MD-1 Complex
Length = 603
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 113/270 (41%), Gaps = 38/270 (14%)
Query: 44 VPDTTIGKLSKLQSLDLSENNITALPSDLWSLGSLKSLNLSYNRISGSLPSNIGNF---- 99
+ TT ++LQ LDL+ ++ LPS + L LK L LS N + NF
Sbjct: 266 ISSTTFQCFTQLQELDLTATHLKGLPSGMKGLNLLKKLVLSVNHFDQLCQISAANFPSLT 325
Query: 100 ---------------------GLLEVFDLSNNNFSGEIPAA--ISSLVSLRVLKLDGNMF 136
G L+ DLS+N+ + + +L L+ L L N
Sbjct: 326 HLYIRGNVKKLHLGVGCLEKLGNLQTLDLSHNDIEASDCCSLQLKNLSHLQTLNLSHNEP 385
Query: 137 QWSIPPGLLNCQSLVTVDLSMNQLNGSLPDGFGAAFPKLKSLNLAGNEIKGRDTH-FAGL 195
C L +DL+ +L+ + P L+ LNL + + H AGL
Sbjct: 386 LGLQSQAFKECPQLELLDLAFTRLHINAPQSPFQNLHFLQVLNLTYCFLDTSNQHLLAGL 445
Query: 196 KSITNLNISGNLFQ-GSVMGVFL----ESLEVIDLRSNQFQGHISQVQFNSSYNWSRLVY 250
+ +LN+ GN FQ G++ L SLEV+ L S I Q F+S ++ +
Sbjct: 446 PVLRHLNLKGNHFQDGTITKTNLLQTVGSLEVLILSSCGLLS-IDQQAFHS---LGKMSH 501
Query: 251 VDLSENQLSGEIFHNFSQAQNLKHLSLAYN 280
VDLS N L+ + + S + + +L+LA N
Sbjct: 502 VDLSHNSLTCDSIDSLSHLKGI-YLNLAAN 530
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 136/317 (42%), Gaps = 14/317 (4%)
Query: 77 SLKSLNLSYNRISGSLPSNIGNFGLLEVFDLSNNNFSGEIPAAISSLVSLRVLKLDGNMF 136
S++SLNL +R S + F L+ DL+ + G +P+ + L L+ L L N F
Sbjct: 252 SVESLNLQEHRFSDISSTTFQCFTQLQELDLTATHLKG-LPSGMKGLNLLKKLVLSVNHF 310
Query: 137 QWSIPPGLLNCQSLVTVDLSMNQLNGSLPDGFGAAFPKLKSLNLAGNEIKGRDTHFAGLK 196
N SL + + N L G L++L+L+ N+I+ D LK
Sbjct: 311 DQLCQISAANFPSLTHLYIRGNVKKLHLGVGCLEKLGNLQTLDLSHNDIEASDCCSLQLK 370
Query: 197 SITN---LNISGNLFQGSVMGVFLES--LEVIDLRSNQFQGHISQVQFNSSYNWSRLVYV 251
++++ LN+S N G F E LE++DL + + Q F N L +
Sbjct: 371 NLSHLQTLNLSHNEPLGLQSQAFKECPQLELLDLAFTRLHINAPQSPFQ---NLHFLQVL 427
Query: 252 DLSENQLSGEIFHNFSQAQNLKHLSLAYNRF---TRQEFPQIGTLLGLEHLNLSRTSLIG 308
+L+ L H + L+HL+L N F T + + T+ LE L LS L+
Sbjct: 428 NLTYCFLDTSNQHLLAGLPVLRHLNLKGNHFQDGTITKTNLLQTVGSLEVLILSSCGLLS 487
Query: 309 DIPSEILQLSSLHTLDLSMNHLT-GQIPTVSAKNLGIIDMSHNNLSGEIPASLLEKLPQM 367
L + +DLS N LT I ++S ++++ N+++ I LL L Q
Sbjct: 488 IDQQAFHSLGKMSHVDLSHNSLTCDSIDSLSHLKGIYLNLAANSINI-ISPRLLPILSQQ 546
Query: 368 ERFNFSYNNLTLCASEL 384
N S+N L S +
Sbjct: 547 STINLSHNPLDCTCSNI 563
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 59/103 (57%), Gaps = 12/103 (11%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIAR----GSP 700
+ L +LH S IHRDIKA++V L + E +L+DFG+A G D +I R G+P
Sbjct: 115 KGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVA---GQLTDTQIKRNXFVGTP 168
Query: 701 GYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYP 743
++ PE + S + + K+D++ G+ +EL G+ P + +P
Sbjct: 169 FWMAPEVIK-QSAYDS-KADIWSLGITAIELARGEPPHSELHP 209
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 60/111 (54%), Gaps = 16/111 (14%)
Query: 639 IALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIAR- 697
+ L +AL+ LH +IHRDIK+ S+ L + +LSDFG F + +E+ R
Sbjct: 252 VCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFG----FCAQVSKEVPRR 304
Query: 698 ----GSPGYIPPEFAQPDSDFPT-PKSDVYCYGVVLLELITGKKPLGDDYP 743
G+P ++ PE S P P+ D++ G++++E++ G+ P ++ P
Sbjct: 305 KXLVGTPYWMAPELI---SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP 352
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 126/314 (40%), Gaps = 54/314 (17%)
Query: 508 SNFDRGTLLAEGKFGPVYRG-FLPGGIHVAVKVLVHGSTLTDQEAA----RELEYLGRIK 562
+NF + G+F VYR L G+ VA+K V L D +A +E++ L ++
Sbjct: 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKK-VQIFDLMDAKARADCIKEIDLLKQLN 90
Query: 563 HPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQ 622
HPN++ I ++ + + + G+L + I+
Sbjct: 91 HPNVIKYYASFIEDNELNIVLELADAGDLSRM--------------------------IK 124
Query: 623 NVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFG 682
+ + L R K + AL +H S ++HRDIK ++V++ +L D G
Sbjct: 125 HFKKQKRLIPERTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLG 181
Query: 683 LAKIFGNGLDEEIA-RGSPGYIPPEFAQPDS-DFPTPKSDVYCYGVVLLELITGKKPLGD 740
L + F + + G+P Y+ PE + +F KSD++ G +L E+ + P
Sbjct: 182 LGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNF---KSDIWSLGCLLYEMAALQSPFYG 238
Query: 741 DYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPS 800
D + NL S + + + + D EE ++ +C P KRP
Sbjct: 239 D-----KMNLYSLCKKIEQCDYPPLPSD---------HYSEELRQLVNMCINPDPEKRPD 284
Query: 801 MQQIVGLLKDIEST 814
+ + + K + +
Sbjct: 285 VTYVYDVAKRMHAC 298
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 114/278 (41%), Gaps = 43/278 (15%)
Query: 535 VAVKVLVHGSTLTDQEA-ARELEYLGRI-KHPNLVPLTGYCIA-GDQRIAIYDYMENGNL 591
VAVK+L G+T ++ A EL+ L I H N+V L G C G + I ++ + GNL
Sbjct: 61 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 120
Query: 592 QNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLH 651
L + ++ + L + F+ A+ + FL
Sbjct: 121 STYLR---------SKRNEFVPYKTPEDLYKDFLTLEHLICYSFQ------VAKGMEFL- 164
Query: 652 HGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPD 711
S IHRD+ A ++ L ++ DFGLA+ D + R +P ++ P+
Sbjct: 165 --ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXK--DPDXVRKGDARLPLKWMAPE 220
Query: 712 SDFP---TPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAI 767
+ F T +SDV+ +GV+L E+ + G P YP G+ + + R +
Sbjct: 221 TIFDRVYTIQSDVWSFGVLLWEIFSLGASP----YP------------GVKIDEEFCRRL 264
Query: 768 DPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIV 805
R P+ E + C P +RP+ ++V
Sbjct: 265 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 302
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 114/283 (40%), Gaps = 52/283 (18%)
Query: 535 VAVKVLVHGSTLTDQEA-ARELEYLGRI-KHPNLVPLTGYCIA-GDQRIAIYDYMENGNL 591
VAVK+L G+T ++ A EL+ L I H N+V L G C G + I ++ + GNL
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 592 QNLLHDLPLGVQXXXXXXXXXXXXXXXNSI--QNVGSEGLLTTW-RFRHKI--ALGTARA 646
L N V E L + H I + A+
Sbjct: 120 STYLR-------------------SKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKG 160
Query: 647 LAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPE 706
+ FL S IHRD+ A ++ L ++ DFGLA+ D + R +P +
Sbjct: 161 MEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXK--DPDXVRKGDARLPLK 215
Query: 707 FAQPDSDFP---TPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNLVSWVRGLVRNNK 762
+ P++ F T +SDV+ +GV+L E+ + G P YP G+ + +
Sbjct: 216 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP----YP------------GVKIDEE 259
Query: 763 GSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIV 805
R + R P+ E + C P +RP+ ++V
Sbjct: 260 FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 302
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 100/240 (41%), Gaps = 63/240 (26%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRI--KHPNLVPLTGYC 573
+ +G+FG V+RG G VAVK+ S+ ++ RE E + +H N++
Sbjct: 50 IGKGRFGEVWRGKWRGE-EVAVKIF---SSREERSWFREAEIYQTVMLRHENILGF---- 101
Query: 574 IAGD--------QRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVG 625
IA D Q + DY E+G+L + L+ + V
Sbjct: 102 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV----------------------- 138
Query: 626 SEGLLTTWRFRHKIALGTARALAFLHHGC-----SPPIIHRDIKASSVYLDMNLEPRLSD 680
EG++ K+AL TA LA LH P I HRD+K+ ++ + N ++D
Sbjct: 139 -EGMI-------KLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 190
Query: 681 FGLAKIFGNGLDE-EIA----RGSPGYIPPEFAQPDSDFPT----PKSDVYCYGVVLLEL 731
GLA + D +IA G+ Y+ PE + ++D+Y G+V E+
Sbjct: 191 LGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Query: 638 KIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIAR 697
KIA+ +AL LH S +IHRD+K S+V ++ + ++ DFG++ + + + I
Sbjct: 157 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDA 214
Query: 698 GSPGYIPPEFAQPDSDFP--TPKSDVYCYGVVLLEL 731
G Y+ PE P+ + + KSD++ G+ ++EL
Sbjct: 215 GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIEL 250
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 75/162 (46%), Gaps = 27/162 (16%)
Query: 621 IQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSD 680
IQ VG + +IA+G L FL S II+RD+K +V LD +++D
Sbjct: 433 IQQVGRFKEPHAVFYAAEIAIG----LFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIAD 485
Query: 681 FGLAKI-FGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKS-DVYCYGVVLLELITGKKPL 738
FG+ K +G+ + G+P YI PE P KS D + +GV+L E++ G+ P
Sbjct: 486 FGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQ---PYGKSVDWWAFGVLLYEMLAGQAPF 542
Query: 739 -GDD--------------YPEEKEGNLVSWVRGLVRNNKGSR 765
G+D YP+ V+ +GL+ + G R
Sbjct: 543 EGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMTKHPGKR 584
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 95/239 (39%), Gaps = 44/239 (18%)
Query: 508 SNFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHGSTLTDQEA---ARELEYLGRIKH 563
+F G +L EG F V L A+K+L + + + RE + + R+ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 564 PNLVPLTGYCIAGDQRIAI-YDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQ 622
P V L + D+++ Y +NG L I+
Sbjct: 92 PFFVKLY-FTFQDDEKLYFGLSYAKNGEL--------------------------LKYIR 124
Query: 623 NVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFG 682
+GS T + +I AL +LH IIHRD+K ++ L+ ++ +++DFG
Sbjct: 125 KIGSFDETCTRFYTAEIV----SALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG 177
Query: 683 LAKIFGNGLDEEIAR---GSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
AK+ + A G+ Y+ PE S SD++ G ++ +L+ G P
Sbjct: 178 TAKVLSPESKQARANXFVGTAQYVSPELLTEKS--ACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 102/230 (44%), Gaps = 36/230 (15%)
Query: 515 LLAEGKFGPVYRGFLPGG---IHVAVKVLVHGSTLTD-QEAARELEYLGRI-KHPNLVPL 569
++ EG FG V + + + A+K + ++ D ++ A ELE L ++ HPN++ L
Sbjct: 32 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 91
Query: 570 TGYCIAGDQRIAIY---DYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGS 626
G C + R +Y +Y +GNL + L + ++ + S
Sbjct: 92 LGAC---EHRGYLYLAIEYAPHGNLLDFL-------RKSRVLETDPAFAIANSTASTLSS 141
Query: 627 EGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKI 686
+ LL A AR + +L IHRD+ A ++ + N +++DFGL++
Sbjct: 142 QQLL-------HFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSRG 191
Query: 687 FGNGLDEEIARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT 733
E + + G +P + +S T SDV+ YGV+L E+++
Sbjct: 192 -----QEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 96/236 (40%), Gaps = 40/236 (16%)
Query: 508 SNFDRGTLLAEGKFGPVYRGFLPG-GIHVAVKVLVHGSTLTDQEAAR---ELEYLGRIKH 563
++FD LL +G FG V G + A+K+L + E A E L +H
Sbjct: 8 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 67
Query: 564 PNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQN 623
P L L D+ + +Y G L H
Sbjct: 68 PFLTALKYAFQTHDRLCFVMEYANGGEL--FFH--------------------------- 98
Query: 624 VGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGL 683
+ E + T R R A AL +LH S +++RDIK ++ LD + +++DFGL
Sbjct: 99 LSRERVFTEERARFYGA-EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGL 154
Query: 684 AKI-FGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
K +G + G+P Y+ PE + D+D+ D + GVV+ E++ G+ P
Sbjct: 155 CKEGISDGATMKTFCGTPEYLAPEVLE-DNDYGRA-VDWWGLGVVMYEMMCGRLPF 208
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 59/103 (57%), Gaps = 12/103 (11%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIAR----GSP 700
+ L +LH S IHRDIKA++V L + E +L+DFG+A G D +I R G+P
Sbjct: 130 KGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVA---GQLTDTQIKRNXFVGTP 183
Query: 701 GYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYP 743
++ PE + S + + K+D++ G+ +EL G+ P + +P
Sbjct: 184 FWMAPEVIK-QSAYDS-KADIWSLGITAIELARGEPPHSELHP 224
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 59/103 (57%), Gaps = 12/103 (11%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIAR----GSP 700
+ L +LH S IHRDIKA++V L + E +L+DFG+A G D +I R G+P
Sbjct: 135 KGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVA---GQLTDTQIKRNTFVGTP 188
Query: 701 GYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYP 743
++ PE + S + + K+D++ G+ +EL G+ P + +P
Sbjct: 189 FWMAPEVIK-QSAYDS-KADIWSLGITAIELARGEPPHSELHP 229
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 98/240 (40%), Gaps = 46/240 (19%)
Query: 510 FDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVP 568
FD L EG +G VY+ G VA+K + S L QE +E+ + + P++V
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDL--QEIIKEISIMQQCDSPHVVK 88
Query: 569 LTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVG-SE 627
G + +Y G++ +++ ++N +E
Sbjct: 89 YYGSYFKNTDLWIVMEYCGAGSVSDIIR------------------------LRNKTLTE 124
Query: 628 GLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIF 687
+ T I T + L +LH IHRDIKA ++ L+ +L+DFG+A
Sbjct: 125 DEIAT------ILQSTLKGLEYLHFMRK---IHRDIKAGNILLNTEGHAKLADFGVA--- 172
Query: 688 GNGLDEEIAR----GSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYP 743
G D R G+P ++ PE Q +D++ G+ +E+ GK P D +P
Sbjct: 173 GQLTDXMAKRNXVIGTPFWMAPEVIQEIGY--NCVADIWSLGITAIEMAEGKPPYADIHP 230
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 96/236 (40%), Gaps = 40/236 (16%)
Query: 508 SNFDRGTLLAEGKFGPVYRGFLPG-GIHVAVKVLVHGSTLTDQEAAR---ELEYLGRIKH 563
++FD LL +G FG V G + A+K+L + E A E L +H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 564 PNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQN 623
P L L D+ + +Y G L H
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGEL--FFH--------------------------- 95
Query: 624 VGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGL 683
+ E + T R R A AL +LH S +++RDIK ++ LD + +++DFGL
Sbjct: 96 LSRERVFTEERARFYGA-EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGL 151
Query: 684 AKI-FGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
K +G + G+P Y+ PE + D+D+ D + GVV+ E++ G+ P
Sbjct: 152 CKEGISDGATMKTFCGTPEYLAPEVLE-DNDYGRA-VDWWGLGVVMYEMMCGRLPF 205
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 102/230 (44%), Gaps = 36/230 (15%)
Query: 515 LLAEGKFGPVYRGFLPGG---IHVAVKVLVHGSTLTD-QEAARELEYLGRI-KHPNLVPL 569
++ EG FG V + + + A+K + ++ D ++ A ELE L ++ HPN++ L
Sbjct: 22 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 81
Query: 570 TGYCIAGDQRIAIY---DYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGS 626
G C + R +Y +Y +GNL + L + ++ + S
Sbjct: 82 LGAC---EHRGYLYLAIEYAPHGNLLDFL-------RKSRVLETDPAFAIANSTASTLSS 131
Query: 627 EGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKI 686
+ LL A AR + +L IHRD+ A ++ + N +++DFGL++
Sbjct: 132 QQLL-------HFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSRG 181
Query: 687 FGNGLDEEIARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT 733
E + + G +P + +S T SDV+ YGV+L E+++
Sbjct: 182 -----QEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 95/217 (43%), Gaps = 45/217 (20%)
Query: 534 HVAVKVLVHGSTLTDQEAARELEY-----LGRIKHPNLVPLTGYCIAGDQRIAIYDYMEN 588
H +V V L Q+ REL + + H N+V + + GD+ + +++E
Sbjct: 68 HTGKQVAVKKMDLRKQQR-RELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEG 126
Query: 589 GNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALA 648
G L +++ + + E + T + L RAL+
Sbjct: 127 GALTDIV------------------------THTRMNEEQIAT-------VCLSVLRALS 155
Query: 649 FLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGL-AKIFGNGLDEEIARGSPGYIPPEF 707
+LH+ +IHRDIK+ S+ L + +LSDFG A++ + G+P ++ PE
Sbjct: 156 YLHNQG---VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEV 212
Query: 708 AQPDSDFPT-PKSDVYCYGVVLLELITGKKPLGDDYP 743
S P + D++ G++++E+I G+ P ++ P
Sbjct: 213 I---SRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPP 246
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 80/188 (42%), Gaps = 29/188 (15%)
Query: 554 ELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXX 613
EL+ + IK+ + G D+ IY+YMEN ++ L D V
Sbjct: 93 ELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSI--LKFDEYFFVLDKNYTCFI-- 148
Query: 614 XXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMN 673
IQ + I + +++H+ I HRD+K S++ +D N
Sbjct: 149 ------PIQVIKC------------IIKSVLNSFSYIHN--EKNICHRDVKPSNILMDKN 188
Query: 674 LEPRLSDFGLAKIFGNGLDEEI--ARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLEL 731
+LSDFG ++ +D++I +RG+ ++PPEF +S + K D++ G+ L +
Sbjct: 189 GRVKLSDFGESEYM---VDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVM 245
Query: 732 ITGKKPLG 739
P
Sbjct: 246 FYNVVPFS 253
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 96/236 (40%), Gaps = 40/236 (16%)
Query: 508 SNFDRGTLLAEGKFGPVYRGFLPG-GIHVAVKVLVHGSTLTDQEAAR---ELEYLGRIKH 563
++FD LL +G FG V G + A+K+L + E A E L +H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 564 PNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQN 623
P L L D+ + +Y G L H
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGEL--FFH--------------------------- 95
Query: 624 VGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGL 683
+ E + T R R A AL +LH S +++RDIK ++ LD + +++DFGL
Sbjct: 96 LSRERVFTEERARFYGA-EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGL 151
Query: 684 AKI-FGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
K +G + G+P Y+ PE + D+D+ D + GVV+ E++ G+ P
Sbjct: 152 CKEGISDGATMKXFCGTPEYLAPEVLE-DNDYGRA-VDWWGLGVVMYEMMCGRLPF 205
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 114/283 (40%), Gaps = 52/283 (18%)
Query: 535 VAVKVLVHGSTLTDQEA-ARELEYLGRI-KHPNLVPLTGYCIA-GDQRIAIYDYMENGNL 591
VAVK+L G+T ++ A EL+ L I H N+V L G C G + I ++ + GNL
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNL 110
Query: 592 QNLLHDLPLGVQXXXXXXXXXXXXXXXNSI--QNVGSEGLLTTW-RFRHKI--ALGTARA 646
L N V E L + H I + A+
Sbjct: 111 STYLRS-------------------KRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKG 151
Query: 647 LAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPE 706
+ FL S IHRD+ A ++ L ++ DFGLA+ D + R +P +
Sbjct: 152 MEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK--DPDYVRKGDARLPLK 206
Query: 707 FAQPDSDFP---TPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNLVSWVRGLVRNNK 762
+ P++ F T +SDV+ +GV+L E+ + G P YP G+ + +
Sbjct: 207 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP----YP------------GVKIDEE 250
Query: 763 GSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIV 805
R + R P+ E + C P +RP+ ++V
Sbjct: 251 FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 293
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 114/283 (40%), Gaps = 52/283 (18%)
Query: 535 VAVKVLVHGSTLTDQEA-ARELEYLGRI-KHPNLVPLTGYCIA-GDQRIAIYDYMENGNL 591
VAVK+L G+T ++ A EL+ L I H N+V L G C G + I ++ + GNL
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNL 110
Query: 592 QNLLHDLPLGVQXXXXXXXXXXXXXXXNSI--QNVGSEGLLTTW-RFRHKI--ALGTARA 646
L N V E L + H I + A+
Sbjct: 111 STYLRS-------------------KRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKG 151
Query: 647 LAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPE 706
+ FL S IHRD+ A ++ L ++ DFGLA+ D + R +P +
Sbjct: 152 MEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK--DPDYVRKGDARLPLK 206
Query: 707 FAQPDSDFP---TPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNLVSWVRGLVRNNK 762
+ P++ F T +SDV+ +GV+L E+ + G P YP G+ + +
Sbjct: 207 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP----YP------------GVKIDEE 250
Query: 763 GSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIV 805
R + R P+ E + C P +RP+ ++V
Sbjct: 251 FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 293
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 96/239 (40%), Gaps = 44/239 (18%)
Query: 508 SNFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHGSTLTDQEA---ARELEYLGRIKH 563
+F G +L EG F V L A+K+L + + + RE + + R+ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 564 PNLVPLTGYCIAGDQRIAI-YDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQ 622
P V L + D+++ Y +NG L I+
Sbjct: 92 PFFVKLY-FTFQDDEKLYFGLSYAKNGEL--------------------------LKYIR 124
Query: 623 NVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFG 682
+GS T + +I AL +LH IIHRD+K ++ L+ ++ +++DFG
Sbjct: 125 KIGSFDETCTRFYTAEIV----SALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG 177
Query: 683 LAKIFGNGLDEEIAR---GSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
AK+ + A G+ Y+ PE S + SD++ G ++ +L+ G P
Sbjct: 178 TAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXKS--SDLWALGCIIYQLVAGLPPF 234
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 85/210 (40%), Gaps = 50/210 (23%)
Query: 535 VAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNL 594
VAVK L H + ++ RE+E L ++H N+V G C + +R NL+ +
Sbjct: 43 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR----------NLKLI 92
Query: 595 LHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGC 654
+ LP G L + +HK + + L + C
Sbjct: 93 MEYLPYGS---------------------------LRDYLQKHKERIDHIKLLQYTSQIC 125
Query: 655 -------SPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIAR-GSPGYIPPE 706
+ IHR++ ++ ++ ++ DFGL K+ D+E + PG P
Sbjct: 126 KGMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQ--DKEYYKVKEPGESPIF 183
Query: 707 FAQPDSDFPTP---KSDVYCYGVVLLELIT 733
+ P+S + SDV+ +GVVL EL T
Sbjct: 184 WYAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 114/283 (40%), Gaps = 52/283 (18%)
Query: 535 VAVKVLVHGSTLTDQEA-ARELEYLGRI-KHPNLVPLTGYCIA-GDQRIAIYDYMENGNL 591
VAVK+L G+T ++ A EL+ L I H N+V L G C G + I ++ + GNL
Sbjct: 97 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 156
Query: 592 QNLLHDLPLGVQXXXXXXXXXXXXXXXNSI--QNVGSEGLLTTW-RFRHKI--ALGTARA 646
L N V E L + H I + A+
Sbjct: 157 STYLR-------------------SKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKG 197
Query: 647 LAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPE 706
+ FL S IHRD+ A ++ L ++ DFGLA+ D + R +P +
Sbjct: 198 MEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK--DPDYVRKGDARLPLK 252
Query: 707 FAQPDSDFP---TPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNLVSWVRGLVRNNK 762
+ P++ F T +SDV+ +GV+L E+ + G P YP G+ + +
Sbjct: 253 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP----YP------------GVKIDEE 296
Query: 763 GSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIV 805
R + R P+ E + C P +RP+ ++V
Sbjct: 297 FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 339
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 96/236 (40%), Gaps = 40/236 (16%)
Query: 508 SNFDRGTLLAEGKFGPVYRGFLPG-GIHVAVKVLVHGSTLTDQEAAR---ELEYLGRIKH 563
++FD LL +G FG V G + A+K+L + E A E L +H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 564 PNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQN 623
P L L D+ + +Y G L H
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGEL--FFH--------------------------- 95
Query: 624 VGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGL 683
+ E + T R R A AL +LH S +++RDIK ++ LD + +++DFGL
Sbjct: 96 LSRERVFTEERARFYGA-EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGL 151
Query: 684 AKI-FGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
K +G + G+P Y+ PE + D+D+ D + GVV+ E++ G+ P
Sbjct: 152 CKEGISDGATMKTFCGTPEYLAPEVLE-DNDYGRA-VDWWGLGVVMYEMMCGRLPF 205
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 96/236 (40%), Gaps = 40/236 (16%)
Query: 508 SNFDRGTLLAEGKFGPVYRGFLPG-GIHVAVKVLVHGSTLTDQEAAR---ELEYLGRIKH 563
++FD LL +G FG V G + A+K+L + E A E L +H
Sbjct: 10 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 69
Query: 564 PNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQN 623
P L L D+ + +Y G L H
Sbjct: 70 PFLTALKYAFQTHDRLCFVMEYANGGEL--FFH--------------------------- 100
Query: 624 VGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGL 683
+ E + T R R A AL +LH S +++RDIK ++ LD + +++DFGL
Sbjct: 101 LSRERVFTEERARFYGA-EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGL 156
Query: 684 AKI-FGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
K +G + G+P Y+ PE + D+D+ D + GVV+ E++ G+ P
Sbjct: 157 CKEGISDGATMKXFCGTPEYLAPEVLE-DNDYGRA-VDWWGLGVVMYEMMCGRLPF 210
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 96/236 (40%), Gaps = 40/236 (16%)
Query: 508 SNFDRGTLLAEGKFGPVYRGFLPG-GIHVAVKVLVHGSTLTDQEAAR---ELEYLGRIKH 563
++FD LL +G FG V G + A+K+L + E A E L +H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 564 PNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQN 623
P L L D+ + +Y G L H
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGEL--FFH--------------------------- 95
Query: 624 VGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGL 683
+ E + T R R A AL +LH S +++RDIK ++ LD + +++DFGL
Sbjct: 96 LSRERVFTEERARFYGA-EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGL 151
Query: 684 AKI-FGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
K +G + G+P Y+ PE + D+D+ D + GVV+ E++ G+ P
Sbjct: 152 CKEGISDGATMKXFCGTPEYLAPEVLE-DNDYGRA-VDWWGLGVVMYEMMCGRLPF 205
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 96/236 (40%), Gaps = 40/236 (16%)
Query: 508 SNFDRGTLLAEGKFGPVYRGFLPG-GIHVAVKVLVHGSTLTDQEAAR---ELEYLGRIKH 563
++FD LL +G FG V G + A+K+L + E A E L +H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 564 PNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQN 623
P L L D+ + +Y G L H
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGEL--FFH--------------------------- 95
Query: 624 VGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGL 683
+ E + T R R A AL +LH S +++RDIK ++ LD + +++DFGL
Sbjct: 96 LSRERVFTEERARFYGA-EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGL 151
Query: 684 AKI-FGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
K +G + G+P Y+ PE + D+D+ D + GVV+ E++ G+ P
Sbjct: 152 CKEGISDGATMKXFCGTPEYLAPEVLE-DNDYGRA-VDWWGLGVVMYEMMCGRLPF 205
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 50/83 (60%), Gaps = 5/83 (6%)
Query: 658 IIHRDIKASSVYLDMNLEPRLSDFGLA-KIFGNGLDEEIARGSPGYIPPE-FAQPDSDFP 715
+IHRD+K +++L+ +LE ++ DFGLA K+ +G ++ G+P YI PE ++ F
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSF- 196
Query: 716 TPKSDVYCYGVVLLELITGKKPL 738
+ DV+ G ++ L+ GK P
Sbjct: 197 --EVDVWSIGCIMYTLLVGKPPF 217
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 50/83 (60%), Gaps = 5/83 (6%)
Query: 658 IIHRDIKASSVYLDMNLEPRLSDFGLA-KIFGNGLDEEIARGSPGYIPPE-FAQPDSDFP 715
+IHRD+K +++L+ +LE ++ DFGLA K+ +G ++ G+P YI PE ++ F
Sbjct: 142 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSF- 200
Query: 716 TPKSDVYCYGVVLLELITGKKPL 738
+ DV+ G ++ L+ GK P
Sbjct: 201 --EVDVWSIGCIMYTLLVGKPPF 221
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 50/83 (60%), Gaps = 5/83 (6%)
Query: 658 IIHRDIKASSVYLDMNLEPRLSDFGLA-KIFGNGLDEEIARGSPGYIPPE-FAQPDSDFP 715
+IHRD+K +++L+ +LE ++ DFGLA K+ +G ++ G+P YI PE ++ F
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSF- 196
Query: 716 TPKSDVYCYGVVLLELITGKKPL 738
+ DV+ G ++ L+ GK P
Sbjct: 197 --EVDVWSIGCIMYTLLVGKPPF 217
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 114/283 (40%), Gaps = 52/283 (18%)
Query: 535 VAVKVLVHGSTLTDQEA-ARELEYLGRI-KHPNLVPLTGYCIA-GDQRIAIYDYMENGNL 591
VAVK+L G+T ++ A EL+ L I H N+V L G C G + I ++ + GNL
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 592 QNLLHDLPLGVQXXXXXXXXXXXXXXXNSI--QNVGSEGLLTTW-RFRHKI--ALGTARA 646
L N V E L + H I + A+
Sbjct: 120 STYLR-------------------SKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKG 160
Query: 647 LAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPE 706
+ FL S IHRD+ A ++ L ++ DFGLA+ D + R +P +
Sbjct: 161 MEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK--DPDXVRKGDARLPLK 215
Query: 707 FAQPDSDFP---TPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNLVSWVRGLVRNNK 762
+ P++ F T +SDV+ +GV+L E+ + G P YP G+ + +
Sbjct: 216 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP----YP------------GVKIDEE 259
Query: 763 GSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIV 805
R + R P+ E + C P +RP+ ++V
Sbjct: 260 FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 302
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 114/283 (40%), Gaps = 52/283 (18%)
Query: 535 VAVKVLVHGSTLTDQEA-ARELEYLGRI-KHPNLVPLTGYCIA-GDQRIAIYDYMENGNL 591
VAVK+L G+T ++ A EL+ L I H N+V L G C G + I ++ + GNL
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 592 QNLLHDLPLGVQXXXXXXXXXXXXXXXNSI--QNVGSEGLLTTW-RFRHKI--ALGTARA 646
L N V E L + H I + A+
Sbjct: 120 STYLR-------------------SKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKG 160
Query: 647 LAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPE 706
+ FL S IHRD+ A ++ L ++ DFGLA+ D + R +P +
Sbjct: 161 MEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK--DPDYVRKGDARLPLK 215
Query: 707 FAQPDSDFP---TPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNLVSWVRGLVRNNK 762
+ P++ F T +SDV+ +GV+L E+ + G P YP G+ + +
Sbjct: 216 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP----YP------------GVKIDEE 259
Query: 763 GSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIV 805
R + R P+ E + C P +RP+ ++V
Sbjct: 260 FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 302
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 115/267 (43%), Gaps = 55/267 (20%)
Query: 515 LLAEGKFGPVYRG-FLPGG----IHVAVKVLVHG-STLTDQEAARELEYLGRIKHPNLVP 568
+L G FG VY+G ++P G I VA+KVL S ++E E + + P +
Sbjct: 24 VLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSR 83
Query: 569 LTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEG 628
L G C+ ++ + M G L + + + + +GS+
Sbjct: 84 LLGICLTSTVQL-VTQLMPYGCLLDHVRE----------------------NRGRLGSQD 120
Query: 629 LLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFG 688
LL W + A+ +++L ++HRD+ A +V + +++DFGLA++
Sbjct: 121 LLN-W------CMQIAKGMSYLE---DVRLVHRDLAARNVLVKSPNHVKITDFGLARLL- 169
Query: 689 NGLDEEIARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT-GKKPLGDDYPE 744
+DE G +P ++ +S T +SDV+ YGV + EL+T G KP D P
Sbjct: 170 -DIDETEYHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPY-DGIPA 227
Query: 745 EKEGNLVSWVRGLVRNNKGSRAIDPKI 771
+ +L+ KG R P I
Sbjct: 228 REIPDLL---------EKGERLPQPPI 245
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 114/278 (41%), Gaps = 46/278 (16%)
Query: 535 VAVKVLVHGSTLTDQEA-ARELEYLGRI-KHPNLVPLTGYCIA-GDQRIAIYDYMENGNL 591
VAVK+L G+T ++ A EL+ L I H N+V L G C G + I ++ + GNL
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 592 QNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLH 651
L + ++ + L + F+ A+ + FL
Sbjct: 120 STYLR------------SKRNEFVPYKDLYKDFLTLEHLICYSFQ------VAKGMEFL- 160
Query: 652 HGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPD 711
S IHRD+ A ++ L ++ DFGLA+ D + R +P ++ P+
Sbjct: 161 --ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYK--DPDYVRKGDARLPLKWMAPE 216
Query: 712 SDFP---TPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAI 767
+ F T +SDV+ +GV+L E+ + G P YP G+ + + R +
Sbjct: 217 TIFDRVYTIQSDVWSFGVLLWEIFSLGASP----YP------------GVKIDEEFCRRL 260
Query: 768 DPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIV 805
R P+ E + C P +RP+ ++V
Sbjct: 261 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 298
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 38/204 (18%)
Query: 535 VAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNL 594
VAVK L H + ++ RE+E L ++H N+V G C + +R NL+ +
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR----------NLKLI 94
Query: 595 LHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWRFRH-KIALGTARALAFLHHG 653
+ LP G + +Q R H K+ T++ + +
Sbjct: 95 MEYLPYG--------------SLRDYLQAHAE-------RIDHIKLLQYTSQICKGMEYL 133
Query: 654 CSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIAR-GSPGYIPPEFAQPDS 712
+ IHRD+ ++ ++ ++ DFGL K+ D+E + PG P + P+S
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ--DKEXXKVKEPGESPIFWYAPES 191
Query: 713 DFPTP---KSDVYCYGVVLLELIT 733
+ SDV+ +GVVL EL T
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFT 215
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 107/246 (43%), Gaps = 57/246 (23%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIA 575
+ +G+FG V G G VAVK + + +T Q E + +++H NLV L G +
Sbjct: 29 IGKGEFGDVMLGDYRGN-KVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIV- 84
Query: 576 GDQRIAIY---DYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTT 632
+++ +Y +YM G+L + L V +G + LL
Sbjct: 85 -EEKGGLYIVTEYMAKGSLVDYLRSRGRSV---------------------LGGDCLL-- 120
Query: 633 WRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLD 692
K +L A+ +L +HRD+ A +V + + ++SDFGL K
Sbjct: 121 -----KFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTK------- 165
Query: 693 EEIARGSPGYIPPEFAQPDS----DFPTPKSDVYCYGVVLLELITGKK------PLGDDY 742
E + G +P ++ P++ F T KSDV+ +G++L E+ + + PL D
Sbjct: 166 EASSTQDTGKLPVKWTAPEALREKKFST-KSDVWSFGILLWEIYSFGRVPYPRIPLKDVV 224
Query: 743 PEEKEG 748
P ++G
Sbjct: 225 PRVEKG 230
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 114/278 (41%), Gaps = 46/278 (16%)
Query: 535 VAVKVLVHGSTLTDQEA-ARELEYLGRI-KHPNLVPLTGYCIA-GDQRIAIYDYMENGNL 591
VAVK+L G+T ++ A EL+ L I H N+V L G C G + I ++ + GNL
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 592 QNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLH 651
L + ++ + L + F+ A+ + FL
Sbjct: 120 STYLR------------SKRNEFVPYKDLYKDFLTLEHLIXYSFQ------VAKGMEFL- 160
Query: 652 HGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPD 711
S IHRD+ A ++ L ++ DFGLA+ D + R +P ++ P+
Sbjct: 161 --ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYK--DPDYVRKGDARLPLKWMAPE 216
Query: 712 SDFP---TPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAI 767
+ F T +SDV+ +GV+L E+ + G P YP G+ + + R +
Sbjct: 217 TIFDRVYTIQSDVWSFGVLLWEIFSLGASP----YP------------GVKIDEEFXRRL 260
Query: 768 DPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIV 805
R P+ E + C P +RP+ ++V
Sbjct: 261 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 298
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 100/233 (42%), Gaps = 45/233 (19%)
Query: 515 LLAEGKFGPVYRGFLPG----GIHVAVKVLVHGSTLTDQEA-ARELEYLGRIKHPNLVPL 569
+L EG FG VY G I+VAVK TL ++E E + + HP++V L
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 78
Query: 570 TGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGL 629
G I + I + G L + L +N S +
Sbjct: 79 IGI-IEEEPTWIIMELYPYGELGHYLE-------------------------RNKNSLKV 112
Query: 630 LTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGN 689
LT + +L +A+A+L S +HRDI ++ + +L DFGL++
Sbjct: 113 LTLVLY----SLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIE- 164
Query: 690 GLDEEIARGSPGYIPPEFAQPDS-DFP--TPKSDVYCYGVVLLELIT-GKKPL 738
DE+ + S +P ++ P+S +F T SDV+ + V + E+++ GK+P
Sbjct: 165 --DEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPF 215
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 114/278 (41%), Gaps = 42/278 (15%)
Query: 535 VAVKVLVHGSTLTDQEA-ARELEYLGRI-KHPNLVPLTGYCIA-GDQRIAIYDYMENGNL 591
VAVK+L G+T ++ A EL+ L I H N+V L G C G + I ++ + GNL
Sbjct: 62 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 121
Query: 592 QNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLH 651
L + ++ + L + F+ A+ + FL
Sbjct: 122 STYLR--------SKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQ------VAKGMEFL- 166
Query: 652 HGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPD 711
S IHRD+ A ++ L ++ DFGLA+ D + R +P ++ P+
Sbjct: 167 --ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK--DPDYVRKGDARLPLKWMAPE 222
Query: 712 SDFP---TPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAI 767
+ F T +SDV+ +GV+L E+ + G P YP G+ + + R +
Sbjct: 223 TIFDRVYTIQSDVWSFGVLLWEIFSLGASP----YP------------GVKIDEEFCRRL 266
Query: 768 DPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIV 805
R P+ E + C P +RP+ ++V
Sbjct: 267 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 304
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 121/305 (39%), Gaps = 64/305 (20%)
Query: 507 TSNFDRGTLLAEGKFGPVYRGFLPG-GIHVAVKVLVHG--STLTDQEAARELEYLGRIKH 563
+ N+D L +G F V R G+ A K++ S Q+ RE +++H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 564 PNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQN 623
PN+V L +D ++ + L+ DL G + ++
Sbjct: 65 PNIVRL-------------HDSIQEESFHYLVFDLVTGGEL----------------FED 95
Query: 624 VGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLE---PRLSD 680
+ + + H I ++A+ H S I+HR++K ++ L + +L+D
Sbjct: 96 IVAREFYSEADASHCIQ-QILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLAD 151
Query: 681 FGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGD 740
FGLA + G+PGY+ PE + D + P D++ GV+L L+ G P D
Sbjct: 152 FGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDP-YSKP-VDIWACGVILYILLVGYPPFWD 209
Query: 741 ---------------DYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALK 785
DYP + + + L+ ++PK R T ++ALK
Sbjct: 210 EDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLI---DSMLTVNPKKRITA-----DQALK 261
Query: 786 IGYLC 790
+ ++C
Sbjct: 262 VPWIC 266
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 100/233 (42%), Gaps = 45/233 (19%)
Query: 515 LLAEGKFGPVYRGFLPG----GIHVAVKVLVHGSTLTDQEA-ARELEYLGRIKHPNLVPL 569
+L EG FG VY G I+VAVK TL ++E E + + HP++V L
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 90
Query: 570 TGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGL 629
G I + I + G L + L +N S +
Sbjct: 91 IGI-IEEEPTWIIMELYPYGELGHYLE-------------------------RNKNSLKV 124
Query: 630 LTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGN 689
LT + +L +A+A+L S +HRDI ++ + +L DFGL++
Sbjct: 125 LTLVLY----SLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIE- 176
Query: 690 GLDEEIARGSPGYIPPEFAQPDS-DFP--TPKSDVYCYGVVLLELIT-GKKPL 738
DE+ + S +P ++ P+S +F T SDV+ + V + E+++ GK+P
Sbjct: 177 --DEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPF 227
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 100/233 (42%), Gaps = 45/233 (19%)
Query: 515 LLAEGKFGPVYRGFLPG----GIHVAVKVLVHGSTLTDQEA-ARELEYLGRIKHPNLVPL 569
+L EG FG VY G I+VAVK TL ++E E + + HP++V L
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 74
Query: 570 TGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGL 629
G I + I + G L + L +N S +
Sbjct: 75 IGI-IEEEPTWIIMELYPYGELGHYLE-------------------------RNKNSLKV 108
Query: 630 LTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGN 689
LT + +L +A+A+L S +HRDI ++ + +L DFGL++
Sbjct: 109 LTLVLY----SLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIE- 160
Query: 690 GLDEEIARGSPGYIPPEFAQPDS-DFP--TPKSDVYCYGVVLLELIT-GKKPL 738
DE+ + S +P ++ P+S +F T SDV+ + V + E+++ GK+P
Sbjct: 161 --DEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPF 211
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 11/116 (9%)
Query: 628 GLLTTWRFRHKIALGTARALAFLHHGC-------SPPIIHRDIKASSVYLDMNLEPRLSD 680
G L + RH+ L +R L + C S +HRD+ A ++ ++ +++D
Sbjct: 95 GCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIAD 154
Query: 681 FGLAKIFGNGLDEEIARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT 733
FGLAK+ D + R PG P + P+S + + +SDV+ +GVVL EL T
Sbjct: 155 FGLAKLLPLDKDXXVVR-EPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 121/305 (39%), Gaps = 64/305 (20%)
Query: 507 TSNFDRGTLLAEGKFGPVYRGFLPG-GIHVAVKVLVHG--STLTDQEAARELEYLGRIKH 563
+ N+D L +G F V R G+ A K++ S Q+ RE +++H
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 564 PNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQN 623
PN+V L +D ++ + L+ DL G + ++
Sbjct: 64 PNIVRL-------------HDSIQEESFHYLVFDLVTGGEL----------------FED 94
Query: 624 VGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLE---PRLSD 680
+ + + H I ++A+ H S I+HR++K ++ L + +L+D
Sbjct: 95 IVAREFYSEADASHCIQ-QILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLAD 150
Query: 681 FGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGD 740
FGLA + G+PGY+ PE + D + P D++ GV+L L+ G P D
Sbjct: 151 FGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDP-YSKP-VDIWACGVILYILLVGYPPFWD 208
Query: 741 ---------------DYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALK 785
DYP + + + L+ ++PK R T ++ALK
Sbjct: 209 EDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLI---DSMLTVNPKKRITA-----DQALK 260
Query: 786 IGYLC 790
+ ++C
Sbjct: 261 VPWIC 265
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 7/84 (8%)
Query: 658 IIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIAR---GSPGYIPPEFAQPDSDF 714
++HRD+K ++V+LD +L DFGLA+I + DE+ A+ G+P Y+ PE Q +
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNH--DEDFAKEFVGTPYYMSPE--QMNRMS 192
Query: 715 PTPKSDVYCYGVVLLELITGKKPL 738
KSD++ G +L EL P
Sbjct: 193 YNEKSDIWSLGCLLYELCALMPPF 216
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 73/162 (45%), Gaps = 27/162 (16%)
Query: 621 IQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSD 680
IQ VG + +I++G L FLH II+RD+K +V LD +++D
Sbjct: 111 IQQVGKFKEPQAVFYAAEISIG----LFFLH---KRGIIYRDLKLDNVMLDSEGHIKIAD 163
Query: 681 FGLAKI-FGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKS-DVYCYGVVLLELITGKKPL 738
FG+ K +G+ G+P YI PE P KS D + YGV+L E++ G+ P
Sbjct: 164 FGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQ---PYGKSVDWWAYGVLLYEMLAGQPPF 220
Query: 739 -GDD--------------YPEEKEGNLVSWVRGLVRNNKGSR 765
G+D YP+ VS +GL+ + R
Sbjct: 221 DGEDEDELFQSIMEHNVSYPKSLSKEAVSICKGLMTKHPAKR 262
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 107/246 (43%), Gaps = 57/246 (23%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIA 575
+ +G+FG V G G VAVK + + +T Q E + +++H NLV L G +
Sbjct: 14 IGKGEFGDVMLGDYRGN-KVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIV- 69
Query: 576 GDQRIAIY---DYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTT 632
+++ +Y +YM G+L + L V +G + LL
Sbjct: 70 -EEKGGLYIVTEYMAKGSLVDYLRSRGRSV---------------------LGGDCLL-- 105
Query: 633 WRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLD 692
K +L A+ +L +HRD+ A +V + + ++SDFGL K
Sbjct: 106 -----KFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTK------- 150
Query: 693 EEIARGSPGYIPPEFAQPDS----DFPTPKSDVYCYGVVLLELITGKK------PLGDDY 742
E + G +P ++ P++ F T KSDV+ +G++L E+ + + PL D
Sbjct: 151 EASSTQDTGKLPVKWTAPEALREKKFST-KSDVWSFGILLWEIYSFGRVPYPRIPLKDVV 209
Query: 743 PEEKEG 748
P ++G
Sbjct: 210 PRVEKG 215
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 121/305 (39%), Gaps = 64/305 (20%)
Query: 507 TSNFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHG--STLTDQEAARELEYLGRIKH 563
+ N+D L +G F V R G+ A K++ S Q+ RE +++H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 564 PNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQN 623
PN+V L +D ++ + L+ DL G + ++
Sbjct: 65 PNIVRL-------------HDSIQEESFHYLVFDLVTGGEL----------------FED 95
Query: 624 VGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLE---PRLSD 680
+ + + H I ++A+ H S I+HR++K ++ L + +L+D
Sbjct: 96 IVAREFYSEADASHCIQ-QILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLAD 151
Query: 681 FGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGD 740
FGLA + G+PGY+ PE + D + P D++ GV+L L+ G P D
Sbjct: 152 FGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDP-YSKP-VDIWACGVILYILLVGYPPFWD 209
Query: 741 ---------------DYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALK 785
DYP + + + L+ ++PK R T ++ALK
Sbjct: 210 EDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLI---DSMLTVNPKKRITA-----DQALK 261
Query: 786 IGYLC 790
+ ++C
Sbjct: 262 VPWIC 266
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 91/236 (38%), Gaps = 42/236 (17%)
Query: 508 SNFDRGTLLAEGKFGPVYRGFLPGGIHV-AVKVLVHGSTL---TDQEAARELEYLGRIKH 563
+FD L +GKFG VY + A+KVL + + RE+E ++H
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 564 PNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQN 623
PN++ + Y + + ++ G L +Q
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGEL--------------------------YKELQK 107
Query: 624 VGSEGLLTTWRFRHKIALGTARALA-FLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFG 682
G RF + + LA LH+ +IHRDIK ++ + E +++DFG
Sbjct: 108 HG--------RFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFG 159
Query: 683 LAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
+ + L G+ Y+PPE + + K D++C GV+ E + G P
Sbjct: 160 WS-VHAPSLRRRXMCGTLDYLPPEMIEGKTH--DEKVDLWCAGVLCYEFLVGMPPF 212
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 11/116 (9%)
Query: 628 GLLTTWRFRHKIALGTARALAFLHHGC-------SPPIIHRDIKASSVYLDMNLEPRLSD 680
G L + RH+ L +R L + C S +HRD+ A ++ ++ +++D
Sbjct: 98 GCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIAD 157
Query: 681 FGLAKIFGNGLDEEIARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT 733
FGLAK+ D + R PG P + P+S + + +SDV+ +GVVL EL T
Sbjct: 158 FGLAKLLPLDKDYYVVR-EPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 11/116 (9%)
Query: 628 GLLTTWRFRHKIALGTARALAFLHHGC-------SPPIIHRDIKASSVYLDMNLEPRLSD 680
G L + RH+ L +R L + C S +HRD+ A ++ ++ +++D
Sbjct: 111 GCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIAD 170
Query: 681 FGLAKIFGNGLDEEIARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT 733
FGLAK+ D + R PG P + P+S + + +SDV+ +GVVL EL T
Sbjct: 171 FGLAKLLPLDKDYYVVR-EPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 11/116 (9%)
Query: 628 GLLTTWRFRHKIALGTARALAFLHHGC-------SPPIIHRDIKASSVYLDMNLEPRLSD 680
G L + RH+ L +R L + C S +HRD+ A ++ ++ +++D
Sbjct: 99 GCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIAD 158
Query: 681 FGLAKIFGNGLDEEIARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT 733
FGLAK+ D + R PG P + P+S + + +SDV+ +GVVL EL T
Sbjct: 159 FGLAKLLPLDKDYYVVR-EPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 102/230 (44%), Gaps = 36/230 (15%)
Query: 515 LLAEGKFGPVYRGFLPGG---IHVAVKVLVHGSTLTD-QEAARELEYLGRI-KHPNLVPL 569
++ EG FG V + + + A+K + ++ D ++ A ELE L ++ HPN++ L
Sbjct: 29 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 88
Query: 570 TGYCIAGDQRIAIY---DYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGS 626
G C + R +Y +Y +GNL + L + ++ + S
Sbjct: 89 LGAC---EHRGYLYLAIEYAPHGNLLDFL-------RKSRVLETDPAFAIANSTASTLSS 138
Query: 627 EGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKI 686
+ LL A AR + +L IHR++ A ++ + N +++DFGL++
Sbjct: 139 QQLL-------HFAADVARGMDYLSQ---KQFIHRNLAARNILVGENYVAKIADFGLSRG 188
Query: 687 FGNGLDEEIARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT 733
E + + G +P + +S T SDV+ YGV+L E+++
Sbjct: 189 -----QEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 107/246 (43%), Gaps = 57/246 (23%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIA 575
+ +G+FG V G G VAVK + + +T Q E + +++H NLV L G +
Sbjct: 201 IGKGEFGDVMLGDYRGN-KVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIV- 256
Query: 576 GDQRIAIY---DYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTT 632
+++ +Y +YM G+L + L V +G + LL
Sbjct: 257 -EEKGGLYIVTEYMAKGSLVDYLRSRGRSV---------------------LGGDCLL-- 292
Query: 633 WRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLD 692
K +L A+ +L +HRD+ A +V + + ++SDFGL K
Sbjct: 293 -----KFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTK------- 337
Query: 693 EEIARGSPGYIPPEFAQPDS----DFPTPKSDVYCYGVVLLELITGKK------PLGDDY 742
E + G +P ++ P++ F T KSDV+ +G++L E+ + + PL D
Sbjct: 338 EASSTQDTGKLPVKWTAPEALREKKFST-KSDVWSFGILLWEIYSFGRVPYPRIPLKDVV 396
Query: 743 PEEKEG 748
P ++G
Sbjct: 397 PRVEKG 402
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 88/194 (45%), Gaps = 39/194 (20%)
Query: 502 DLLSATSNFDRGTLLAEGKFGPVYRGFLPGGIH-VAVKV--LVHGSTLTD---QEAAREL 555
D+ S +++ L EG+F VY+ VA+K L H S D + A RE+
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREI 63
Query: 556 EYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXX 615
+ L + HPN++ L ++D+ME +L+ ++ D
Sbjct: 64 KLLQELSHPNIIGLLDAFGHKSNISLVFDFMET-DLEVIIKD------------------ 104
Query: 616 XXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLE 675
NS+ +LT + + L T + L +LH I+HRD+K +++ LD N
Sbjct: 105 ---NSL-------VLTPSHIKAYM-LMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGV 150
Query: 676 PRLSDFGLAKIFGN 689
+L+DFGLAK FG+
Sbjct: 151 LKLADFGLAKSFGS 164
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 107/246 (43%), Gaps = 57/246 (23%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIA 575
+ +G+FG V G G VAVK + + +T Q E + +++H NLV L G +
Sbjct: 20 IGKGEFGDVMLGDYRGN-KVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIV- 75
Query: 576 GDQRIAIY---DYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTT 632
+++ +Y +YM G+L + L V +G + LL
Sbjct: 76 -EEKGGLYIVTEYMAKGSLVDYLRSRGRSV---------------------LGGDCLL-- 111
Query: 633 WRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLD 692
K +L A+ +L +HRD+ A +V + + ++SDFGL K
Sbjct: 112 -----KFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTK------- 156
Query: 693 EEIARGSPGYIPPEFAQP----DSDFPTPKSDVYCYGVVLLELITGKK------PLGDDY 742
E + G +P ++ P ++ F T KSDV+ +G++L E+ + + PL D
Sbjct: 157 EASSTQDTGKLPVKWTAPEALREAAFST-KSDVWSFGILLWEIYSFGRVPYPRIPLKDVV 215
Query: 743 PEEKEG 748
P ++G
Sbjct: 216 PRVEKG 221
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 56/98 (57%), Gaps = 8/98 (8%)
Query: 643 TARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLA-KIFGNGLDEEIARGSPG 701
T + + +LH+ +IHRD+K +++L+ +++ ++ DFGLA KI +G ++ G+P
Sbjct: 151 TIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPN 207
Query: 702 YIPPE-FAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
YI PE + F + D++ G +L L+ GK P
Sbjct: 208 YIAPEVLCKKGHSF---EVDIWSLGCILYTLLVGKPPF 242
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 102/230 (44%), Gaps = 42/230 (18%)
Query: 516 LAEGKFGPVYRGFL---PGGIHVAVKVLVHGSTLTD-QEAARELEYLGRIKHPNLVPLTG 571
L G FG V +G I VA+KVL G+ D +E RE + + ++ +P +V L G
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 572 YCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLT 631
C A + + + M G LH +G + + NV
Sbjct: 404 VCQA--EALMLVMEMAGGGP---LHKFLVGKREEI-------------PVSNVAE----- 440
Query: 632 TWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGL 691
H++++G + +L +HR++ A +V L ++SDFGL+K G
Sbjct: 441 ---LLHQVSMG----MKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADD 490
Query: 692 DEEIARGSPGYIPPEFAQPDS-DFP--TPKSDVYCYGVVLLELIT-GKKP 737
AR S G P ++ P+ +F + +SDV+ YGV + E ++ G+KP
Sbjct: 491 SYYTAR-SAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKP 539
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 99/244 (40%), Gaps = 44/244 (18%)
Query: 497 NITFADLLSATSNFDRGTLLAEGKFGPVYRGFLPGGIHVAVKVLVHGSTL--TDQEAARE 554
N+ F L+ ++ + EG +G VY+ G VA+K + + A RE
Sbjct: 13 NLYFQGLMEKYQKLEK---VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIRE 69
Query: 555 LEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXX 614
+ L + HPN+V L + ++++ME +L+ +L + G+Q
Sbjct: 70 ISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDS--------- 119
Query: 615 XXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNL 674
+I + + L + H I+HRD+K ++ ++ +
Sbjct: 120 -----------------------QIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDG 156
Query: 675 EPRLSDFGLAKIFG---NGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLEL 731
+L+DFGLA+ FG E+ + Y P+ + T D++ G + E+
Sbjct: 157 ALKLADFGLARAFGIPVRSYTHEVV--TLWYRAPDVLMGSKKYST-SVDIWSIGCIFAEM 213
Query: 732 ITGK 735
ITGK
Sbjct: 214 ITGK 217
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 49.7 bits (117), Expect = 7e-06, Method: Composition-based stats.
Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 13/123 (10%)
Query: 634 RFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDE 693
RF H++ G + +LH I HRDIK ++ LD ++SDFGLA +F E
Sbjct: 108 RFFHQLMAG----VVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 694 EIAR---GSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNL 750
+ G+ Y+ PE + +F DV+ G+VL ++ G+ P D P +
Sbjct: 161 RLLNKMXGTLPYVAPELLK-RREFHAEPVDVWSCGIVLTAMLAGELPW--DQPSDSCQEY 217
Query: 751 VSW 753
W
Sbjct: 218 SDW 220
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 49.7 bits (117), Expect = 7e-06, Method: Composition-based stats.
Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 13/123 (10%)
Query: 634 RFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDE 693
RF H++ G + +LH I HRDIK ++ LD ++SDFGLA +F E
Sbjct: 108 RFFHQLMAG----VVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 694 EIAR---GSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNL 750
+ G+ Y+ PE + +F DV+ G+VL ++ G+ P D P +
Sbjct: 161 RLLNKMCGTLPYVAPELLK-RREFHAEPVDVWSCGIVLTAMLAGELPW--DQPSDSCQEY 217
Query: 751 VSW 753
W
Sbjct: 218 SDW 220
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 49.7 bits (117), Expect = 7e-06, Method: Composition-based stats.
Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 13/123 (10%)
Query: 634 RFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDE 693
RF H++ G + +LH I HRDIK ++ LD ++SDFGLA +F E
Sbjct: 108 RFFHQLMAG----VVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 694 EIAR---GSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNL 750
+ G+ Y+ PE + +F DV+ G+VL ++ G+ P D P +
Sbjct: 161 RLLNKMCGTLPYVAPELLK-RREFHAEPVDVWSCGIVLTAMLAGELPW--DQPSDSCQEY 217
Query: 751 VSW 753
W
Sbjct: 218 SDW 220
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 99/244 (40%), Gaps = 44/244 (18%)
Query: 497 NITFADLLSATSNFDRGTLLAEGKFGPVYRGFLPGGIHVAVKVLVHGSTL--TDQEAARE 554
N+ F L+ ++ + EG +G VY+ G VA+K + + A RE
Sbjct: 13 NLYFQGLMEKYQKLEK---VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIRE 69
Query: 555 LEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXX 614
+ L + HPN+V L + ++++ME +L+ +L + G+Q
Sbjct: 70 ISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDS--------- 119
Query: 615 XXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNL 674
+I + + L + H I+HRD+K ++ ++ +
Sbjct: 120 -----------------------QIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDG 156
Query: 675 EPRLSDFGLAKIFG---NGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLEL 731
+L+DFGLA+ FG E+ + Y P+ + T D++ G + E+
Sbjct: 157 ALKLADFGLARAFGIPVRSYTHEVV--TLWYRAPDVLMGSKKYST-SVDIWSIGCIFAEM 213
Query: 732 ITGK 735
ITGK
Sbjct: 214 ITGK 217
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 49.7 bits (117), Expect = 7e-06, Method: Composition-based stats.
Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 13/123 (10%)
Query: 634 RFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDE 693
RF H++ G + +LH I HRDIK ++ LD ++SDFGLA +F E
Sbjct: 108 RFFHQLMAG----VVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 694 EIAR---GSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNL 750
+ G+ Y+ PE + +F DV+ G+VL ++ G+ P D P +
Sbjct: 161 RLLNKMCGTLPYVAPELLK-RREFHAEPVDVWSCGIVLTAMLAGELPW--DQPSDSCQEY 217
Query: 751 VSW 753
W
Sbjct: 218 SDW 220
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 49.7 bits (117), Expect = 7e-06, Method: Composition-based stats.
Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 13/123 (10%)
Query: 634 RFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDE 693
RF H++ G + +LH I HRDIK ++ LD ++SDFGLA +F E
Sbjct: 109 RFFHQLMAG----VVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161
Query: 694 EIAR---GSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNL 750
+ G+ Y+ PE + +F DV+ G+VL ++ G+ P D P +
Sbjct: 162 RLLNKMCGTLPYVAPELLK-RREFHAEPVDVWSCGIVLTAMLAGELPW--DQPSDSCQEY 218
Query: 751 VSW 753
W
Sbjct: 219 SDW 221
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 56/98 (57%), Gaps = 8/98 (8%)
Query: 643 TARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLA-KIFGNGLDEEIARGSPG 701
T + + +LH+ +IHRD+K +++L+ +++ ++ DFGLA KI +G ++ G+P
Sbjct: 151 TIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPN 207
Query: 702 YIPPE-FAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
YI PE + F + D++ G +L L+ GK P
Sbjct: 208 YIAPEVLCKKGHSF---EVDIWSLGCILYTLLVGKPPF 242
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 110/273 (40%), Gaps = 62/273 (22%)
Query: 550 EAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLL-HDLPLGVQXXXXX 608
E +E++ + + HPN+V + D+ + + G++ +++ H + G
Sbjct: 59 ELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKS--- 115
Query: 609 XXXXXXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSV 668
V E + T I L +LH IHRD+KA ++
Sbjct: 116 --------------GVLDESTIAT------ILREVLEGLEYLHKNGQ---IHRDVKAGNI 152
Query: 669 YLDMNLEPRLSDFGLAKIFGNGLDEEIAR--------GSPGYIPPEFAQP--DSDFPTPK 718
L + +++DFG++ G D I R G+P ++ PE + DF K
Sbjct: 153 LLGEDGSVQIADFGVSAFLATGGD--ITRNKVRKTFVGTPCWMAPEVMEQVRGYDF---K 207
Query: 719 SDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTG-PE 777
+D++ +G+ +EL TG P YP K V L N DP +TG +
Sbjct: 208 ADIWSFGITAIELATGAAPY-HKYPPMK-------VLMLTLQN------DPPSLETGVQD 253
Query: 778 KQMEEAL-----KIGYLCTADLPLKRPSMQQIV 805
K+M + K+ LC P KRP+ +++
Sbjct: 254 KEMLKKYGKSFRKMISLCLQKDPEKRPTAAELL 286
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 95/229 (41%), Gaps = 41/229 (17%)
Query: 516 LAEGKFGPVYRGF-LPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCI 574
L +G FG VY+ + A KV+ S ++ E++ L HPN+V L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 575 AGDQRIAIYDYMENGNLQNLLHDL--PLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTT 632
+ + ++ G + ++ +L PL + IQ V +
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPL----------------TESQIQVVCKQ----- 143
Query: 633 WRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGL-AKIFGNGL 691
T AL +LH IIHRD+KA ++ ++ + +L+DFG+ AK
Sbjct: 144 ----------TLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQ 190
Query: 692 DEEIARGSPGYIPPEFAQPDSDFPTP---KSDVYCYGVVLLELITGKKP 737
+ G+P ++ PE ++ P K+DV+ G+ L+E+ + P
Sbjct: 191 RRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 54/101 (53%), Gaps = 12/101 (11%)
Query: 646 ALAFLHHGCSPPIIHRDIKASSV-YLDMNLEPRL--SDFGLAKIFGNGLDEEIARGSPGY 702
A+ +LH I+HRD+K ++ Y + E ++ SDFGL+K+ G G A G+PGY
Sbjct: 132 AVYYLHR---MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGY 188
Query: 703 IPPE-FAQPDSDFPTPKS-DVYCYGVVLLELITGKKPLGDD 741
+ PE AQ P K+ D + GV+ L+ G P D+
Sbjct: 189 VAPEVLAQK----PYSKAVDCWSIGVIAYILLCGYPPFYDE 225
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 101/239 (42%), Gaps = 42/239 (17%)
Query: 512 RGTLLAEGKFGPVYRGFLPG-GIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLT 570
+ +L G+FG V++ G+ +A K++ +E E+ + ++ H NL+ L
Sbjct: 93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLY 152
Query: 571 GYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLL 630
+ + + + +Y++ G L + + D + L
Sbjct: 153 DAFESKNDIVLVMEYVDGGELFDRIIDESYNLTE-------------------------L 187
Query: 631 TTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPR---LSDFGLAKIF 687
T F +I G + H I+H D+K ++ L +N + + + DFGLA+ +
Sbjct: 188 DTILFMKQICEG-------IRHMHQMYILHLDLKPENI-LCVNRDAKQIKIIDFGLARRY 239
Query: 688 GNGLDEEIARGSPGYIPPEFAQPD-SDFPTPKSDVYCYGVVLLELITGKKP-LGDDYPE 744
++ G+P ++ PE D FPT D++ GV+ L++G P LGD+ E
Sbjct: 240 KPREKLKVNFGTPEFLAPEVVNYDFVSFPT---DMWSVGVIAYMLLSGLSPFLGDNDAE 295
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 79/175 (45%), Gaps = 38/175 (21%)
Query: 647 LAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIAR--------G 698
L +LH IHRD+KA ++ L + +++DFG++ G D I R G
Sbjct: 129 LEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGD--ITRNKVRKTFVG 183
Query: 699 SPGYIPPEFAQP--DSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWVRG 756
+P ++ PE + DF K+D++ +G+ +EL TG P YP K V
Sbjct: 184 TPCWMAPEVMEQVRGYDF---KADIWSFGITAIELATGAAPY-HKYPPMK-------VLM 232
Query: 757 LVRNNKGSRAIDPKIRDTG-PEKQMEEAL-----KIGYLCTADLPLKRPSMQQIV 805
L N DP +TG +K+M + K+ LC P KRP+ +++
Sbjct: 233 LTLQN------DPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELL 281
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 60/137 (43%), Gaps = 16/137 (11%)
Query: 646 ALAFLHHGCSPPIIHRDIKASSVYLDMN--LEPRLSDFGLAKIF-----GNGLDEEIARG 698
AL +LH + I HRDIK + N E +L DFGL+K F G G
Sbjct: 180 ALHYLH---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAG 236
Query: 699 SPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWV--RG 756
+P ++ PE ++ PK D + GV+L L+ G P +P + + +S V +
Sbjct: 237 TPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVP----FPGVNDADTISQVLNKK 292
Query: 757 LVRNNKGSRAIDPKIRD 773
L N + P RD
Sbjct: 293 LCFENPNYNVLSPLARD 309
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 95/229 (41%), Gaps = 41/229 (17%)
Query: 516 LAEGKFGPVYRGF-LPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCI 574
L +G FG VY+ + A KV+ S ++ E++ L HPN+V L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 575 AGDQRIAIYDYMENGNLQNLLHDL--PLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTT 632
+ + ++ G + ++ +L PL + IQ V +
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPL----------------TESQIQVVCKQ----- 143
Query: 633 WRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGL-AKIFGNGL 691
T AL +LH IIHRD+KA ++ ++ + +L+DFG+ AK
Sbjct: 144 ----------TLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQ 190
Query: 692 DEEIARGSPGYIPPEFAQPDSDFPTP---KSDVYCYGVVLLELITGKKP 737
+ G+P ++ PE ++ P K+DV+ G+ L+E+ + P
Sbjct: 191 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 92/242 (38%), Gaps = 45/242 (18%)
Query: 505 SATSNFDRGTLLAEGKFGPVYRGFLPGG-IHVAVKVLVHGSTLTDQEAARELE----YLG 559
+ S+F ++ +G FG V + AVKVL + L +E + L
Sbjct: 35 AKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLK 94
Query: 560 RIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXN 619
+KHP LV L D+ + DY+ G L
Sbjct: 95 NVKHPFLVGLHFSFQTADKLYFVLDYINGGEL---------------------------- 126
Query: 620 SIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLS 679
++ E R R A A AL +LH S I++RD+K ++ LD L+
Sbjct: 127 -FYHLQRERCFLEPRARF-YAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLT 181
Query: 680 DFGLAK--IFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKS-DVYCYGVVLLELITGKK 736
DFGL K I N G+P Y+ PE P ++ D +C G VL E++ G
Sbjct: 182 DFGLCKENIEHNSTTSTFC-GTPEYLAPEVLHKQ---PYDRTVDWWCLGAVLYEMLYGLP 237
Query: 737 PL 738
P
Sbjct: 238 PF 239
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Query: 638 KIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIAR 697
KIA+ +AL LH S +IHRD+K S+V ++ + + DFG++ + + ++I
Sbjct: 140 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDA 197
Query: 698 GSPGYIPPEFAQPDSDFP--TPKSDVYCYGVVLLELITGKKP 737
G Y PE P+ + + KSD++ G+ +EL + P
Sbjct: 198 GCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFP 239
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 102/262 (38%), Gaps = 50/262 (19%)
Query: 492 EKPLLNITFADLLSATSNFDRGTLLAEGKFGPVYRG-FLPGGIHVAVKVLVHGSTLTDQE 550
E+P L I +F+ +L +G FG V+ F A+K L L D +
Sbjct: 7 ERPSLQIKLK-----IEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDD 61
Query: 551 AARELEYLGRI-----KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXX 605
+ R+ +HP L + + + +Y+ G+L + H
Sbjct: 62 VECTM-VEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL--MYH--------- 109
Query: 606 XXXXXXXXXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKA 665
IQ+ L + +I LG L FLH S I++RD+K
Sbjct: 110 ---------------IQSCHKFDLSRATFYAAEIILG----LQFLH---SKGIVYRDLKL 147
Query: 666 SSVYLDMNLEPRLSDFGLAK--IFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYC 723
++ LD + +++DFG+ K + G+ E G+P YI PE D +
Sbjct: 148 DNILLDKDGHIKIADFGMCKENMLGDAKTNEFC-GTPDYIAPEILLGQK--YNHSVDWWS 204
Query: 724 YGVVLLELITGKKPLGDDYPEE 745
+GV+L E++ G+ P EE
Sbjct: 205 FGVLLYEMLIGQSPFHGQDEEE 226
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 56/98 (57%), Gaps = 8/98 (8%)
Query: 643 TARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLA-KIFGNGLDEEIARGSPG 701
T + + +LH+ +IHRD+K +++L+ +++ ++ DFGLA KI +G ++ G+P
Sbjct: 135 TIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPN 191
Query: 702 YIPPE-FAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
YI PE + F + D++ G +L L+ GK P
Sbjct: 192 YIAPEVLCKKGHSF---EVDIWSLGCILYTLLVGKPPF 226
>pdb|2ID5|A Chain A, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|B Chain B, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|C Chain C, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|D Chain D, Crystal Structure Of The Lingo-1 Ectodomain
Length = 477
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 149/369 (40%), Gaps = 39/369 (10%)
Query: 79 KSLNLSYNRISGSLPSNIGNFGLLEVFDLSNNNFSGEIPAAISSLVSLRVLKLDGNMFQW 138
+ L+L NRI +F LE +L+ N S P A ++L +LR L L N +
Sbjct: 35 RLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKL 94
Query: 139 SIPPGLLNCQS-LVTVDLSMNQLNGSLPDGFGAAFPKLKSLNLAGNE-IKGRDTHFAGLK 196
IP G+ S L +D+S N++ L F + LKSL + N+ + F+GL
Sbjct: 95 -IPLGVFTGLSNLTKLDISENKIVILLDYMFQDLY-NLKSLEVGDNDLVYISHRAFSGLN 152
Query: 197 SITNLNISG-NLFQGSVMGV-FLESLEVIDLRSNQFQGHISQVQFNSSYNW-----SRLV 249
S+ L + NL + L L V+ LR I F Y S
Sbjct: 153 SLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINA-IRDYSFKRLYRLKVLEISHWP 211
Query: 250 YVD-LSENQLSG------EIFH-NFSQAQNLKHLSLAYNRFTRQEFPQIGTLLG---LEH 298
Y+D ++ N L G I H N + L L Y RF + I T+ G E
Sbjct: 212 YLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHEL 271
Query: 299 LNLSRTSLIGDI-----PSEILQLSSLHTLDLSMNHLTGQIPTV--SAKNLGIIDMSHNN 351
L L L+G P L+ L L++S N LT +V S NL + + N
Sbjct: 272 LRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNP 331
Query: 352 LSGEIPASLLEKLPQMERFNFSYNNLTLCASELSPETLQTAFFGSSNDCPIAANPSFFKR 411
L+ + LL + R NF+ T CA +PE +Q F D P P++F
Sbjct: 332 LACD--CRLLWVFRRRWRLNFNRQQPT-CA---TPEFVQGKEF---KDFPDVLLPNYFTC 382
Query: 412 KAANHKGLK 420
+ A + K
Sbjct: 383 RRARIRDRK 391
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 55 LQSLDLSENNITALPS-DLWSLGSLKSLNLSYNRISGSLPSNIGNFGLLEVFDLSNNNFS 113
L SL ++ N+TA+P + L L+ LNLSYN IS S + L+ L +
Sbjct: 226 LTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLA 285
Query: 114 GEIPAAISSLVSLRVLKLDGN 134
P A L LRVL + GN
Sbjct: 286 VVEPYAFRGLNYLRVLNVSGN 306
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 95/229 (41%), Gaps = 41/229 (17%)
Query: 516 LAEGKFGPVYRGF-LPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCI 574
L +G FG VY+ + A KV+ S ++ E++ L HPN+V L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 575 AGDQRIAIYDYMENGNLQNLLHDL--PLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTT 632
+ + ++ G + ++ +L PL + IQ V +
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPL----------------TESQIQVVCKQ----- 143
Query: 633 WRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLD 692
T AL +LH IIHRD+KA ++ ++ + +L+DFG++ +
Sbjct: 144 ----------TLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQ 190
Query: 693 EEIA-RGSPGYIPPEFAQPDSDFPTP---KSDVYCYGVVLLELITGKKP 737
+ G+P ++ PE ++ P K+DV+ G+ L+E+ + P
Sbjct: 191 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 56/98 (57%), Gaps = 8/98 (8%)
Query: 643 TARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLA-KIFGNGLDEEIARGSPG 701
T + + +LH+ +IHRD+K +++L+ +++ ++ DFGLA KI +G ++ G+P
Sbjct: 151 TIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPN 207
Query: 702 YIPPE-FAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
YI PE + F + D++ G +L L+ GK P
Sbjct: 208 YIAPEVLCKKGHSF---EVDIWSLGCILYTLLVGKPPF 242
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 90/228 (39%), Gaps = 35/228 (15%)
Query: 516 LAEGKFGPVYRGFLPGGI------HVAVKVLVHGSTLTDQ-EAARELEYLGRIKHPNLVP 568
L +G FG VY G G + VA+K + +++ ++ E E + ++V
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 77
Query: 569 LTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEG 628
L G G + I + M G+L++ L L + IQ G
Sbjct: 78 LLGVVSQGQPTLVIMELMTRGDLKSYLRSL----RPEMENNPVLAPPSLSKMIQMAGE-- 131
Query: 629 LLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFG 688
A +A+L+ + +HRD+ A + + + ++ DFG+ +
Sbjct: 132 --------------IADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIX 174
Query: 689 NGLDEEIARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT 733
+ +G G +P + P+S T SDV+ +GVVL E+ T
Sbjct: 175 E--TDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 102/240 (42%), Gaps = 63/240 (26%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRI--KHPNLVPLTGYC 573
+ +G++G V+RG L G VAVK+ S+ +Q RE E + +H N++ G+
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIF---SSRDEQSWFRETEIYNTVLLRHDNIL---GF- 67
Query: 574 IAGD--------QRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVG 625
IA D Q I Y E+G+L + L L
Sbjct: 68 IASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLAL------------------- 108
Query: 626 SEGLLTTWRFRHKIALGTARALAFLHHGC-----SPPIIHRDIKASSVYLDMNLEPRLSD 680
++A+ A LA LH P I HRD K+ +V + NL+ ++D
Sbjct: 109 ------------RLAVSAACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIAD 156
Query: 681 FGLAKIFGNGLDE-EIAR----GSPGYIPPEF--AQPDSD-FPTPK-SDVYCYGVVLLEL 731
GLA + G D +I G+ Y+ PE Q +D F + K +D++ +G+VL E+
Sbjct: 157 LGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 109/253 (43%), Gaps = 51/253 (20%)
Query: 507 TSNFDRGTLLAEGKFGPVYRG-FLPGGIHVAVK-VLVHGSTLTDQEAARELEYLGRIKHP 564
+S+F +LL EG +G V P G VA+K + L RE++ L KH
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 565 NLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNV 624
N++ I QR D EN N ++ +L + V
Sbjct: 70 NII-----TIFNIQRP---DSFENFNEVYIIQEL------------------MQTDLHRV 103
Query: 625 GSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLA 684
S +L+ ++ I T RA+ LH G + +IHRD+K S++ ++ N + ++ DFGLA
Sbjct: 104 ISTQMLSDDHIQYFI-YQTLRAVKVLH-GSN--VIHRDLKPSNLLINSNCDLKVCDFGLA 159
Query: 685 KIFG-------------NGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLEL 731
+I +G+ E +A + Y PE + + + DV+ G +L EL
Sbjct: 160 RIIDESAADNSEPTGQQSGMTEXVA--TRWYRAPEVMLTSAKY-SRAMDVWSCGCILAEL 216
Query: 732 ITGKKPL--GDDY 742
++P+ G DY
Sbjct: 217 FL-RRPIFPGRDY 228
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Query: 643 TARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIAR--GSP 700
T + L + H I+HRDIK ++ +D N ++ DFG+AK + G+
Sbjct: 117 TNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTV 176
Query: 701 GYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
Y PE A+ ++ +D+Y G+VL E++ G+ P
Sbjct: 177 QYFSPEQAKGEA--TDECTDIYSIGIVLYEMLVGEPPF 212
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 90/228 (39%), Gaps = 35/228 (15%)
Query: 516 LAEGKFGPVYRGFLPGGI------HVAVKVLVHGSTLTDQ-EAARELEYLGRIKHPNLVP 568
L +G FG VY G G + VA+K + +++ ++ E E + ++V
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 569 LTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEG 628
L G G + I + M G+L++ L L + IQ G
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSL----RPEMENNPVLAPPSLSKMIQMAGE-- 140
Query: 629 LLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFG 688
A +A+L+ + +HRD+ A + + + ++ DFG+ +
Sbjct: 141 --------------IADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIX 183
Query: 689 NGLDEEIARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT 733
+ +G G +P + P+S T SDV+ +GVVL E+ T
Sbjct: 184 E--TDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 100/235 (42%), Gaps = 45/235 (19%)
Query: 513 GTLLAEGKFGPVYRGFL--PGGIHVAVKVLVHGSTLTD---QEAARELEYLGRIKHPNLV 567
G + EG+FG V++G P +AV + + +D ++ +E + + HP++V
Sbjct: 15 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 74
Query: 568 PLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSE 627
L G I + I + G L++ L + ++ S
Sbjct: 75 KLIGV-ITENPVWIIMELCTLGELRSFLQVRKFSL--------------------DLASL 113
Query: 628 GLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIF 687
L A + ALA+L S +HRDI A +V + N +L DFGL++
Sbjct: 114 ILY---------AYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 161
Query: 688 GNGLDEEIARGSPGYIPPEFAQPDS-DFP--TPKSDVYCYGVVLLE-LITGKKPL 738
D + S G +P ++ P+S +F T SDV+ +GV + E L+ G KP
Sbjct: 162 E---DSTXXKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 213
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 54/114 (47%), Gaps = 9/114 (7%)
Query: 634 RF-RHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLD 692
RF H++ + + L H II+RDIK ++ LD N L+DFGL+K F +
Sbjct: 155 RFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEF---VA 211
Query: 693 EEIAR-----GSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDD 741
+E R G+ Y+ P+ + D + GV++ EL+TG P D
Sbjct: 212 DETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVD 265
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 58/123 (47%), Gaps = 13/123 (10%)
Query: 634 RFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDE 693
RF H++ G + +LH G I HRDIK ++ LD ++SDFGLA +F E
Sbjct: 108 RFFHQLMAG----VVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 694 EI---ARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNL 750
+ G+ Y+ PE + +F DV+ G+VL ++ G+ P D P +
Sbjct: 161 RLLNKMXGTLPYVAPELLK-RREFHAEPVDVWSCGIVLTAMLAGELPW--DQPSDSXQEY 217
Query: 751 VSW 753
W
Sbjct: 218 SDW 220
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 104/241 (43%), Gaps = 41/241 (17%)
Query: 509 NFDRGTLLAEGKFGPVYRG--FLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNL 566
+F L+ G FG V++ + G +V +V +++A RE++ L ++ H N+
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRV-----KYNNEKAEREVKALAKLDHVNI 67
Query: 567 VPLTGYCIAGDQRIAIYDY---MENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQ- 622
V G C G +DY + +L++ +D P + IQ
Sbjct: 68 VHYNG-CWDG------FDYDPETSDDSLESSDYD-PENSKNSSRSKTKCLF------IQM 113
Query: 623 NVGSEGLLTTWRFRHK-------IAL----GTARALAFLHHGCSPPIIHRDIKASSVYLD 671
+G L W + + +AL + + ++H S +IHRD+K S+++L
Sbjct: 114 EFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIFLV 170
Query: 672 MNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLEL 731
+ ++ DFGL N ++G+ Y+ PE Q S + D+Y G++L EL
Sbjct: 171 DTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPE--QISSQDYGKEVDLYALGLILAEL 228
Query: 732 I 732
+
Sbjct: 229 L 229
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 109/253 (43%), Gaps = 51/253 (20%)
Query: 507 TSNFDRGTLLAEGKFGPVYRG-FLPGGIHVAVK-VLVHGSTLTDQEAARELEYLGRIKHP 564
+S+F +LL EG +G V P G VA+K + L RE++ L KH
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 565 NLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNV 624
N++ I QR D EN N ++ +L + V
Sbjct: 70 NII-----TIFNIQRP---DSFENFNEVYIIQEL------------------MQTDLHRV 103
Query: 625 GSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLA 684
S +L+ ++ I T RA+ LH G + +IHRD+K S++ ++ N + ++ DFGLA
Sbjct: 104 ISTQMLSDDHIQYFI-YQTLRAVKVLH-GSN--VIHRDLKPSNLLINSNCDLKVCDFGLA 159
Query: 685 KIFG-------------NGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLEL 731
+I +G+ E +A + Y PE + + + DV+ G +L EL
Sbjct: 160 RIIDESAADNSEPTGQQSGMTEYVA--TRWYRAPEVMLTSAKY-SRAMDVWSCGCILAEL 216
Query: 732 ITGKKPL--GDDY 742
++P+ G DY
Sbjct: 217 FL-RRPIFPGRDY 228
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 101/251 (40%), Gaps = 55/251 (21%)
Query: 508 SNFDRGTLLAEGKFGPVY---RGFLPGGIHVAVKVLVHGSTLTDQEAAR---ELEYLGRI 561
S+F+ +L +G FG V+ + P H+ ++ +TL ++ R E + L +
Sbjct: 28 SHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADV 87
Query: 562 KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSI 621
HP +V L + I D++ G+L
Sbjct: 88 NHPFVVKLHYAFQTEGKLYLILDFLRGGDL-----------------------------F 118
Query: 622 QNVGSEGLLTTWRFRH---KIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRL 678
+ E + T + ++ALG L H S II+RD+K ++ LD +L
Sbjct: 119 TRLSKEVMFTEEDVKFYLAELALG-------LDHLHSLGIIYRDLKPENILLDEEGHIKL 171
Query: 679 SDFGLAKIFGNGLDEEIAR----GSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITG 734
+DFGL+K +D E G+ Y+ PE + +D + YGV++ E++TG
Sbjct: 172 TDFGLSK---EAIDHEKKAYSFCGTVEYMAPEVVNRQGH--SHSADWWSYGVLMFEMLTG 226
Query: 735 KKPL-GDDYPE 744
P G D E
Sbjct: 227 SLPFQGKDRKE 237
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 81/193 (41%), Gaps = 42/193 (21%)
Query: 554 ELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXX 613
E+ L +IKHPN+V L D E+G L+ L G +
Sbjct: 66 EIAVLHKIKHPNIVALD-------------DIYESGGHLYLIMQLVSGGEL--------- 103
Query: 614 XXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVY---L 670
+ +G T R ++ A+ +LH I+HRD+K ++ L
Sbjct: 104 -------FDRIVEKGFYTE-RDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSL 152
Query: 671 DMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPE-FAQPDSDFPTPKS-DVYCYGVVL 728
D + + +SDFGL+K+ G A G+PGY+ PE AQ P K+ D + GV+
Sbjct: 153 DEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQK----PYSKAVDCWSIGVIA 208
Query: 729 LELITGKKPLGDD 741
L+ G P D+
Sbjct: 209 YILLCGYPPFYDE 221
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 7/84 (8%)
Query: 658 IIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIAR---GSPGYIPPEFAQPDSDF 714
++HRD+K ++V+LD +L DFGLA+I + D A+ G+P Y+ PE Q +
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNH--DTSFAKAFVGTPYYMSPE--QMNRMS 192
Query: 715 PTPKSDVYCYGVVLLELITGKKPL 738
KSD++ G +L EL P
Sbjct: 193 YNEKSDIWSLGCLLYELCALMPPF 216
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 7/84 (8%)
Query: 658 IIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIAR---GSPGYIPPEFAQPDSDF 714
++HRD+K ++V+LD +L DFGLA+I + D A+ G+P Y+ PE Q +
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNH--DTSFAKTFVGTPYYMSPE--QMNRMS 192
Query: 715 PTPKSDVYCYGVVLLELITGKKPL 738
KSD++ G +L EL P
Sbjct: 193 YNEKSDIWSLGCLLYELCALMPPF 216
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 121/307 (39%), Gaps = 55/307 (17%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARE-LEYL-------GRIKHPNLV 567
L +G FG VY G I + V T+ + + RE +E+L G H ++V
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVV 80
Query: 568 PLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSE 627
L G G + + + M +G+L++ L L + N G
Sbjct: 81 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSL------------------RPEAENNPGRP 122
Query: 628 GLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIF 687
T + ++A A +A+L+ + +HRD+ A + + + ++ DFG+ +
Sbjct: 123 P--PTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDI 177
Query: 688 GNGLDEEIARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT-GKKPLGDDYP 743
+ +G G +P + P+S T SD++ +GVVL E+ + ++P
Sbjct: 178 XE--TDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPY----- 230
Query: 744 EEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQ 803
+GL +D D P+ E + +C P RP+ +
Sbjct: 231 -----------QGLSNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLE 278
Query: 804 IVGLLKD 810
IV LLKD
Sbjct: 279 IVNLLKD 285
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 78/193 (40%), Gaps = 42/193 (21%)
Query: 554 ELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXX 613
E+ L +IKHPN+V L +G I + G L
Sbjct: 66 EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL---------------------- 103
Query: 614 XXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVY---L 670
+ +G T R ++ A+ +LH I+HRD+K ++ L
Sbjct: 104 -------FDRIVEKGFYTE-RDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSL 152
Query: 671 DMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPE-FAQPDSDFPTPKS-DVYCYGVVL 728
D + + +SDFGL+K+ G A G+PGY+ PE AQ P K+ D + GV+
Sbjct: 153 DEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQK----PYSKAVDCWSIGVIA 208
Query: 729 LELITGKKPLGDD 741
L+ G P D+
Sbjct: 209 YILLCGYPPFYDE 221
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 104/245 (42%), Gaps = 58/245 (23%)
Query: 508 SNFDRGTLLAEGKFGPVYR-GFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNL 566
S+ G +L +G FG + G + +K L+ T + +E++ + ++HPN+
Sbjct: 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNV 69
Query: 567 VPLTGYCIAGDQRIA-IYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVG 625
+ G + D+R+ I +Y++ G L+ + I+++
Sbjct: 70 LKFIG-VLYKDKRLNFITEYIKGGTLRGI--------------------------IKSMD 102
Query: 626 SEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAK 685
S+ W R A A +A+LH S IIHRD+ + + + N ++DFGLA+
Sbjct: 103 SQ---YPWSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLAR 156
Query: 686 IFGNGLDEE------------------IARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVV 727
+ +DE+ G+P ++ PE S K DV+ +G+V
Sbjct: 157 LM---VDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSY--DEKVDVFSFGIV 211
Query: 728 LLELI 732
L E+I
Sbjct: 212 LCEII 216
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 100/206 (48%), Gaps = 31/206 (15%)
Query: 43 SVPDTTIGKLSKLQSLDLSENNITALPSDLWS-LGSLKSLNLSYNRISGSLPSNIGNFGL 101
S+P +L+KL+ L L++N + LP+ ++ L +L++L ++ N++ +LP IG
Sbjct: 51 SLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQ-ALP--IG---- 103
Query: 102 LEVFDLSNNNFSGEIPAAISSLVSLRVLKLDGNMFQWSIPPGLLNCQSLVT-VDLSMNQL 160
VFD LV+L L+LD N + S+PP + + + +T + L N+L
Sbjct: 104 --VFD---------------QLVNLAELRLDRNQLK-SLPPRVFDSLTKLTYLSLGYNEL 145
Query: 161 NGSLPDGFGAAFPKLKSLNLAGNEIKGR-DTHFAGLKSITNLNISGNLFQGSVMGVF--L 217
SLP G LK L L N++K + F L + L + N + G F L
Sbjct: 146 Q-SLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSL 204
Query: 218 ESLEVIDLRSNQFQGHISQVQFNSSY 243
E L+++ L+ N + + + + + +
Sbjct: 205 EKLKMLQLQENPWDCTCNGIIYMAKW 230
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 101/228 (44%), Gaps = 36/228 (15%)
Query: 57 SLDLSENNITALPSDLWSLGSLKSLNLSYNRISGSLPSNIGNFGLLEVFDLSNNNFSGEI 116
S+D S +TA+PS++ + K L+L N++S SLPS
Sbjct: 20 SVDCSSKKLTAIPSNIPA--DTKKLDLQSNKLS-SLPS---------------------- 54
Query: 117 PAAISSLVSLRVLKLDGNMFQWSIPPGLLN-CQSLVTVDLSMNQLNGSLPDGFGAAFPKL 175
A L LR+L L+ N Q ++P G+ ++L T+ ++ N+L +LP G L
Sbjct: 55 -KAFHRLTKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTDNKLQ-ALPIGVFDQLVNL 111
Query: 176 KSLNLAGNEIKGRDTH-FAGLKSITNLNISGNLFQGSVMGVF--LESLEVIDLRSNQFQG 232
L L N++K F L +T L++ N Q GVF L SL+ + L +NQ +
Sbjct: 112 AELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLK- 170
Query: 233 HISQVQFNSSYNWSRLVYVDLSENQLSGEIFHNFSQAQNLKHLSLAYN 280
+ + F+ + L + L NQL F + LK L L N
Sbjct: 171 RVPEGAFDK---LTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQEN 215
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 72/157 (45%), Gaps = 8/157 (5%)
Query: 153 VDLSMNQLNGSLPDGFGAAFPKLKSLNLAGNEIKGRDTH-FAGLKSITNLNISGNLFQGS 211
+DL N+L+ SLP KL+ L L N+++ F LK++ L ++ N Q
Sbjct: 42 LDLQSNKLS-SLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQAL 100
Query: 212 VMGVFLESLEVIDLR--SNQFQGHISQVQFNSSYNWSRLVYVDLSENQLSGEIFHNFSQA 269
+GVF + + + +LR NQ + +V F+S ++L Y+ L N+L F +
Sbjct: 101 PIGVFDQLVNLAELRLDRNQLKSLPPRV-FDS---LTKLTYLSLGYNELQSLPKGVFDKL 156
Query: 270 QNLKHLSLAYNRFTRQEFPQIGTLLGLEHLNLSRTSL 306
+LK L L N+ R L L+ L L L
Sbjct: 157 TSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQL 193
Score = 33.1 bits (74), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 65/156 (41%), Gaps = 5/156 (3%)
Query: 223 IDLRSNQFQGHISQVQFNSSYNWSRLVYVDLSENQLSGEIFHNFSQAQNLKHLSLAYNRF 282
+DL+SN+ +S + + + ++L + L++N+L F + +NL+ L + N+
Sbjct: 42 LDLQSNK----LSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKL 97
Query: 283 TRQEFPQIGTLLGLEHLNLSRTSLIGDIPSEILQLSSLHTLDLSMNHLTGQIPTVSAKNL 342
L+ L L L R L P L+ L L L N L V K
Sbjct: 98 QALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLT 157
Query: 343 GIIDMS-HNNLSGEIPASLLEKLPQMERFNFSYNNL 377
+ ++ +NN +P +KL +++ N L
Sbjct: 158 SLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQL 193
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 93/238 (39%), Gaps = 59/238 (24%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAA--RELEYLGRI--KHPNLVPLTG 571
+ +G++G V+ G G VAVKV T +EA+ RE E + +H N++
Sbjct: 45 IGKGRYGEVWMGKWRGE-KVAVKVF-----FTTEEASWFRETEIYQTVLMRHENILGFIA 98
Query: 572 YCIAGD----QRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSE 627
I G Q I DY ENG+L + L L +
Sbjct: 99 ADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSML--------------------- 137
Query: 628 GLLTTWRFRHKIALGTARALAFLHHGC-----SPPIIHRDIKASSVYLDMNLEPRLSDFG 682
K+A + L LH P I HRD+K+ ++ + N ++D G
Sbjct: 138 ----------KLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLG 187
Query: 683 LAKIFGNGLDE-----EIARGSPGYIPPEFAQPDSDFPTPKS----DVYCYGVVLLEL 731
LA F + +E G+ Y+PPE + +S D+Y +G++L E+
Sbjct: 188 LAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 87/214 (40%), Gaps = 45/214 (21%)
Query: 535 VAVKVLVHGSTLTDQEAARELE--YLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQ 592
VA+K + L +E + E E L +IKHPN+V L +G I + G L
Sbjct: 46 VAIKCIAK-KALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL- 103
Query: 593 NLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHH 652
+ +G T R ++ A+ +LH
Sbjct: 104 ----------------------------FDRIVEKGFYTE-RDASRLIFQVLDAVKYLH- 133
Query: 653 GCSPPIIHRDIKASSVY---LDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPE-FA 708
I+HRD+K ++ LD + + +SDFGL+K+ G A G+PGY+ PE A
Sbjct: 134 --DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLA 191
Query: 709 QPDSDFPTPKS-DVYCYGVVLLELITGKKPLGDD 741
Q P K+ D + GV+ L+ G P D+
Sbjct: 192 QK----PYSKAVDCWSIGVIAYILLCGYPPFYDE 221
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 97/260 (37%), Gaps = 67/260 (25%)
Query: 504 LSATSNFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHG--------------STLTD 548
L S+F+ +L +G FG V + + A+K + H ++L
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNH 61
Query: 549 QEAARELEYLGRIKHPNLV-PLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXX 607
Q R Y ++ N V P+T I + +Y ENG L +L+H L Q
Sbjct: 62 QYVVRY--YAAWLERRNFVKPMTAVKKKSTLFIQM-EYCENGTLYDLIHSENLNQQRD-- 116
Query: 608 XXXXXXXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASS 667
WR +I AL+++H S IIHRD+K +
Sbjct: 117 -----------------------EYWRLFRQIL----EALSYIH---SQGIIHRDLKPMN 146
Query: 668 VYLDMNLEPRLSDFGLAKIFGNGLD---------------EEIARGSPGYIPPEFAQPDS 712
+++D + ++ DFGLAK LD A G+ Y+ E
Sbjct: 147 IFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTG 206
Query: 713 DFPTPKSDVYCYGVVLLELI 732
+ K D+Y G++ E+I
Sbjct: 207 HY-NEKIDMYSLGIIFFEMI 225
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 100/235 (42%), Gaps = 45/235 (19%)
Query: 513 GTLLAEGKFGPVYRGFL--PGGIHVAVKVLVHGSTLTD---QEAARELEYLGRIKHPNLV 567
G + EG+FG V++G P +AV + + +D ++ +E + + HP++V
Sbjct: 395 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 454
Query: 568 PLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSE 627
L G I + I + G L++ L + ++ S
Sbjct: 455 KLIG-VITENPVWIIMELCTLGELRSFLQVRKFSL--------------------DLASL 493
Query: 628 GLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIF 687
L A + ALA+L S +HRDI A +V + N +L DFGL++
Sbjct: 494 ILY---------AYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 541
Query: 688 GNGLDEEIARGSPGYIPPEFAQPDS-DFP--TPKSDVYCYGVVLLE-LITGKKPL 738
D + S G +P ++ P+S +F T SDV+ +GV + E L+ G KP
Sbjct: 542 E---DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 593
>pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
pdb|4G8A|B Chain B, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
Length = 635
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 91/211 (43%), Gaps = 26/211 (12%)
Query: 36 SNSGLS--GSVPDTTIGKLSKLQSLDLSENNITALPSDLWSLGSLKSLNLSYNRISGSLP 93
S +GLS G + G +S L+ LDLS N + + S+ L L+ L+ +
Sbjct: 379 SRNGLSFKGCCSQSDFGTIS-LKYLDLSFNGVITMSSNFLGLEQLEHLDFQH-------- 429
Query: 94 SNIGNFGLLEVF---------DLSNNNFSGEIPAAISSLVSLRVLKLDGNMFQWSIPPGL 144
SN+ VF D+S+ + + L SL VLK+ GN FQ + P +
Sbjct: 430 SNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDI 489
Query: 145 LN-CQSLVTVDLSMNQLNGSLPDGFGAAFPKLKSLNLAGNEIKGRDTH-FAGLKSITNLN 202
++L +DLS QL P F + L+ LN++ N DT + L S+ L+
Sbjct: 490 FTELRNLTFLDLSQCQLEQLSPTAFN-SLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLD 548
Query: 203 ISGNLFQGSV---MGVFLESLEVIDLRSNQF 230
S N S + F SL ++L N F
Sbjct: 549 YSLNHIMTSKKQELQHFPSSLAFLNLTQNDF 579
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 83/189 (43%), Gaps = 12/189 (6%)
Query: 195 LKSITNLNISGNLFQGSVMGVFLESLEVIDLRSN--QFQGHISQVQFNSSYNWSRLVYVD 252
LKS+ L + N + V L SLE +DL N F+G SQ F + L Y+D
Sbjct: 348 LKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGT----ISLKYLD 403
Query: 253 LSENQLSGEIFHNFSQAQNLKHLSLAYNRFTRQ-EFPQIGTLLGLEHLNLSRTSLIGDIP 311
LS N + + NF + L+HL ++ + EF +L L +L++S T
Sbjct: 404 LSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFN 462
Query: 312 SEILQLSSLHTLDLSMNHLTGQ-IPTV--SAKNLGIIDMSHNNLSGEIPASLLEKLPQME 368
LSSL L ++ N +P + +NL +D+S L P + L ++
Sbjct: 463 GIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTA-FNSLSSLQ 521
Query: 369 RFNFSYNNL 377
N S+NN
Sbjct: 522 VLNMSHNNF 530
Score = 36.6 bits (83), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 64/139 (46%), Gaps = 9/139 (6%)
Query: 77 SLKSLNLSYNRISGSLPSNIGNFGLLEVFDLSNNNFSGEIPAAISSLVSLRVLKLDGNMF 136
S K+L+LS+N + + +F L+V DLS A SL L L L GN
Sbjct: 53 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPI 112
Query: 137 Q---WSIPPGLLNCQSLVTVDLSMNQLNGSLPDGFGAAFPKLKSLNLAGNEIKGRD--TH 191
Q GL + Q LV V+ ++ L + P G LK LN+A N I+ +
Sbjct: 113 QSLALGAFSGLSSLQKLVAVETNLASLE-NFPIG---HLKTLKELNVAHNLIQSFKLPEY 168
Query: 192 FAGLKSITNLNISGNLFQG 210
F+ L ++ +L++S N Q
Sbjct: 169 FSNLTNLEHLDLSSNKIQS 187
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 67/140 (47%), Gaps = 6/140 (4%)
Query: 192 FAGLKSITNLNISGNLFQGSVMGVF--LESLEVIDLRSNQFQGHISQVQFNSSYNWSRLV 249
F L+++ L+IS + + G+F L SLEV+ + N FQ + F N L
Sbjct: 441 FLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRN---LT 497
Query: 250 YVDLSENQLSGEIFHNFSQAQNLKHLSLAYNRFTRQEFPQIGTLLGLEHLNLSRTSLIGD 309
++DLS+ QL F+ +L+ L++++N F + L L+ L+ S ++
Sbjct: 498 FLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTS 557
Query: 310 IPSEILQL-SSLHTLDLSMN 328
E+ SSL L+L+ N
Sbjct: 558 KKQELQHFPSSLAFLNLTQN 577
Score = 30.0 bits (66), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 64/140 (45%), Gaps = 23/140 (16%)
Query: 153 VDLSMNQLNGSLPDGFGAAFPKLKSLNLAGNEIKG-RDTHFAGLKSITNLNISGNLFQGS 211
+DLS N L F +FP+L+ L+L+ EI+ D + L ++ L ++GN Q
Sbjct: 57 LDLSFNPLRHLGSYSF-FSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSL 115
Query: 212 VMGVF-----LESLEVIDLRSNQFQ----GHISQV-QFNSSYNWSRLVYVDLSENQLSGE 261
+G F L+ L ++ + GH+ + + N ++N + S +
Sbjct: 116 ALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQ-----------SFK 164
Query: 262 IFHNFSQAQNLKHLSLAYNR 281
+ FS NL+HL L+ N+
Sbjct: 165 LPEYFSNLTNLEHLDLSSNK 184
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 121/307 (39%), Gaps = 55/307 (17%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARE-LEYL-------GRIKHPNLV 567
L +G FG VY G I + V T+ + + RE +E+L G H ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVV 83
Query: 568 PLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSE 627
L G G + + + M +G+L++ L L + N G
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSL------------------RPEAENNPGRP 125
Query: 628 GLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIF 687
T + ++A A +A+L+ + +HRD+ A + + + ++ DFG+ +
Sbjct: 126 P--PTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDI 180
Query: 688 GNGLDEEIARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT-GKKPLGDDYP 743
+ +G G +P + P+S T SD++ +GVVL E+ + ++P
Sbjct: 181 XE--TDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPY----- 233
Query: 744 EEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQ 803
+GL +D D P+ E + +C P RP+ +
Sbjct: 234 -----------QGLSNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLE 281
Query: 804 IVGLLKD 810
IV LLKD
Sbjct: 282 IVNLLKD 288
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
Query: 634 RFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDE 693
RF H++ G + +LH G I HRDIK ++ LD ++SDFGLA +F E
Sbjct: 108 RFFHQLMAG----VVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 694 EI---ARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKP 737
+ G+ Y+ PE + +F DV+ G+VL ++ G+ P
Sbjct: 161 RLLNKMXGTLPYVAPELLK-RREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3RG1|A Chain A, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|E Chain E, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|I Chain I, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|M Chain M, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|B Chain B, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|F Chain F, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|J Chain J, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|N Chain N, Crystal Structure Of The Rp105MD-1 Complex
Length = 612
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 134/310 (43%), Gaps = 54/310 (17%)
Query: 18 WRGVVCDSNKQHVTDFLASNSGLS--------------GSVPDTTIGKLSKLQSLDLSEN 63
W G D++ Q++T A+ GL + +T +++Q LDL+
Sbjct: 230 WLGTFEDTDDQYLTS--ATFEGLCDMSVESINLQKHRFSDLSSSTFRCFTRVQELDLTAA 287
Query: 64 NITALPSDLWSLGSLKSLNLSYNRI-------SGSLPS-------------NIGNFGLLE 103
++ LPS + + SLK L L+ N + S PS ++G L +
Sbjct: 288 HLNGLPSGIEGMNSLKKLVLNANSFDQLCQINAASFPSLRDLYIKGNMRKLDLGTRCLEK 347
Query: 104 VFDLSNNNFS-GEIPAAISSLVSLRVLK-LDGNMFQWSIPPGLLN-----CQSLVTVDLS 156
+ +L + S +I A+ + L+ L+ L ++ P GL + C L +D++
Sbjct: 348 LENLQKLDLSHSDIEASDCCNLQLKNLRHLQYLNLSYNEPLGLEDQAFKECPQLELLDVA 407
Query: 157 MNQLNGSLPDGFGAAFPKLKSLNLAGNEIKGRDTH-FAGLKSITNLNISGNLFQ-GSVMG 214
L+ P L+ LNL+ + + H AGL+ + +LN+ GN FQ GS+
Sbjct: 408 FTHLHVKAPHSPFQNLHLLRVLNLSHCLLDTSNQHLLAGLQDLRHLNLQGNSFQDGSISK 467
Query: 215 V----FLESLEVIDLRSNQFQGHISQVQFNSSYNWSRLVYVDLSENQLSGEIFHNFSQAQ 270
+ SLE++ L S I Q F+ N + L DLS N L+G+ S +
Sbjct: 468 TNLLQMVGSLEILILSSCNLLS-IDQQAFHGLRNVNHL---DLSHNSLTGDSMDALSHLK 523
Query: 271 NLKHLSLAYN 280
L +L++A N
Sbjct: 524 GL-YLNMASN 532
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 92/229 (40%), Gaps = 37/229 (16%)
Query: 516 LAEGKFGPVYRGFLPGGI------HVAVKVLVHGSTLTDQ-EAARELEYLGRIKHPNLVP 568
L +G FG VY G G + VA+K + +++ ++ E E + ++V
Sbjct: 24 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 83
Query: 569 LTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEG 628
L G G + I + M G+L++ L L + IQ G
Sbjct: 84 LLGVVSQGQPTLVIMELMTRGDLKSYLRSL----RPEMENNPVLAPPSLSKMIQMAGE-- 137
Query: 629 LLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAK-IF 687
A +A+L+ + +HRD+ A + + + ++ DFG+ + I+
Sbjct: 138 --------------IADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 180
Query: 688 GNGLDEEIARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT 733
+ +G G +P + P+S T SDV+ +GVVL E+ T
Sbjct: 181 ET---DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 92/229 (40%), Gaps = 37/229 (16%)
Query: 516 LAEGKFGPVYRGFLPGGI------HVAVKVLVHGSTLTDQ-EAARELEYLGRIKHPNLVP 568
L +G FG VY G G + VA+K + +++ ++ E E + ++V
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 569 LTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEG 628
L G G + I + M G+L++ L L + IQ G
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSL----RPEMENNPVLAPPSLSKMIQMAGE-- 133
Query: 629 LLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAK-IF 687
A +A+L+ + +HRD+ A + + + ++ DFG+ + I+
Sbjct: 134 --------------IADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 176
Query: 688 GNGLDEEIARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT 733
+ +G G +P + P+S T SDV+ +GVVL E+ T
Sbjct: 177 ET---DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
Query: 634 RFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDE 693
RF H++ G + +LH G I HRDIK ++ LD ++SDFGLA +F E
Sbjct: 109 RFFHQLMAG----VVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161
Query: 694 EI---ARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKP 737
+ G+ Y+ PE + +F DV+ G+VL ++ G+ P
Sbjct: 162 RLLNKMXGTLPYVAPELLK-RREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 90/214 (42%), Gaps = 45/214 (21%)
Query: 535 VAVKVLVHGSTLTDQEAARELE--YLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQ 592
VA+K + L +E + E E L +IKHPN+V L D E+G
Sbjct: 46 VAIKCIAK-EALEGKEGSMENEIAVLHKIKHPNIVALD-------------DIYESGGHL 91
Query: 593 NLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHH 652
L+ L G + + +G T R ++ A+ +LH
Sbjct: 92 YLIMQLVSGGEL----------------FDRIVEKGFYTE-RDASRLIFQVLDAVKYLH- 133
Query: 653 GCSPPIIHRDIKASSVY---LDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPE-FA 708
I+HRD+K ++ LD + + +SDFGL+K+ G A G+PGY+ PE A
Sbjct: 134 --DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLA 191
Query: 709 QPDSDFPTPKS-DVYCYGVVLLELITGKKPLGDD 741
Q P K+ D + GV+ L+ G P D+
Sbjct: 192 QK----PYSKAVDCWSIGVIAYILLCGYPPFYDE 221
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 92/229 (40%), Gaps = 37/229 (16%)
Query: 516 LAEGKFGPVYRGFLPGGI------HVAVKVLVHGSTLTDQ-EAARELEYLGRIKHPNLVP 568
L +G FG VY G G + VA+K + +++ ++ E E + ++V
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 82
Query: 569 LTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEG 628
L G G + I + M G+L++ L L + IQ G
Sbjct: 83 LLGVVSQGQPTLVIMELMTRGDLKSYLRSL----RPAMANNPVLAPPSLSKMIQMAGE-- 136
Query: 629 LLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAK-IF 687
A +A+L+ + +HRD+ A + + + ++ DFG+ + I+
Sbjct: 137 --------------IADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 179
Query: 688 GNGLDEEIARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT 733
+ +G G +P + P+S T SDV+ +GVVL E+ T
Sbjct: 180 ET---DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 9/103 (8%)
Query: 646 ALAFLHHGCSPPIIHRDIKASSVYLDMNLEP---RLSDFGLAKIFGNGLDEEIARGSPGY 702
+ +LH I+HRD+K ++ L+ + ++ DFGL+ +F N + G+ Y
Sbjct: 148 GVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYY 204
Query: 703 IPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEE 745
I PE + D K DV+ GV+L L+ G P G +E
Sbjct: 205 IAPEVLRKKYD---EKCDVWSIGVILFILLAGYPPFGGQTDQE 244
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 93/230 (40%), Gaps = 48/230 (20%)
Query: 519 GKFGPVYRGF-LPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGD 577
G FG VY+ + A KV+ S ++ E++ L HPN+V L +
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYEN 80
Query: 578 QRIAIYDYMENGNLQNLLHDL--PLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWRF 635
+ ++ G + ++ +L PL + IQ V + L
Sbjct: 81 NLWILIEFCAGGAVDAVMLELERPL----------------TESQIQVVCKQTL------ 118
Query: 636 RHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEI 695
AL +LH IIHRD+KA ++ ++ + +L+DFG++ I
Sbjct: 119 ---------DALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVS---AKNTRTXI 163
Query: 696 AR-----GSPGYIPPEFAQPDSDFPTP---KSDVYCYGVVLLELITGKKP 737
R G+P ++ PE ++ P K+DV+ G+ L+E+ + P
Sbjct: 164 QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 213
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 92/229 (40%), Gaps = 37/229 (16%)
Query: 516 LAEGKFGPVYRGFLPGGI------HVAVKVLVHGSTLTDQ-EAARELEYLGRIKHPNLVP 568
L +G FG VY G G + VA+K + +++ ++ E E + ++V
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 569 LTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEG 628
L G G + I + M G+L++ L L + IQ G
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSL----RPEMENNPVLAPPSLSKMIQMAGE-- 140
Query: 629 LLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAK-IF 687
A +A+L+ + +HRD+ A + + + ++ DFG+ + I+
Sbjct: 141 --------------IADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 183
Query: 688 GNGLDEEIARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT 733
+ +G G +P + P+S T SDV+ +GVVL E+ T
Sbjct: 184 ET---DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 58/123 (47%), Gaps = 13/123 (10%)
Query: 634 RFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDE 693
RF H++ G + +LH G I HRDIK ++ LD ++SDFGLA +F E
Sbjct: 108 RFFHQLMAG----VVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 694 EIAR---GSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNL 750
+ G+ Y+ PE + +F DV+ G+VL ++ G+ P D P +
Sbjct: 161 RLLNKMCGTLPYVAPELLK-RREFHAEPVDVWSCGIVLTAMLAGELPW--DQPSDSCQEY 217
Query: 751 VSW 753
W
Sbjct: 218 SDW 220
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
Query: 634 RFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDE 693
RF H++ G + +LH G I HRDIK ++ LD ++SDFGLA +F E
Sbjct: 108 RFFHQLMAG----VVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 694 EI---ARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKP 737
+ G+ Y+ PE + +F DV+ G+VL ++ G+ P
Sbjct: 161 RLLNKMXGTLPYVAPELLK-RREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 98/235 (41%), Gaps = 45/235 (19%)
Query: 513 GTLLAEGKFGPVYRGFL--PGGIHVAVKVLVHGSTLTD---QEAARELEYLGRIKHPNLV 567
G + EG+FG V++G P +AV + + +D ++ +E + + HP++V
Sbjct: 15 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 74
Query: 568 PLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSE 627
L G I + I + G L++ L V
Sbjct: 75 KLIG-VITENPVWIIMELCTLGELRSFLQ---------------------------VRKY 106
Query: 628 GLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIF 687
L + L TA LA+L S +HRDI A +V + N +L DFGL++
Sbjct: 107 SLDLASLILYAYQLSTA--LAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 161
Query: 688 GNGLDEEIARGSPGYIPPEFAQPDS-DFP--TPKSDVYCYGVVLLE-LITGKKPL 738
D + S G +P ++ P+S +F T SDV+ +GV + E L+ G KP
Sbjct: 162 E---DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 213
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 97/244 (39%), Gaps = 36/244 (14%)
Query: 501 ADLLSATSNFDRG---TLLAEGKFGPVYRGF-LPGGIHVAVKVLVHGSTLTDQEAARELE 556
+DLL +D +L +G +G VY G L + +A+K + + Q E+
Sbjct: 12 SDLLEYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIA 71
Query: 557 YLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXX 616
+KH N+V G + ENG ++ + +P G
Sbjct: 72 LHKHLKHKNIVQYLG------------SFSENGFIKIFMEQVPGG---SLSALLRSKWGP 116
Query: 617 XXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLD-MNLE 675
++ Q +G F K L L +LH I+HRDIK +V ++ +
Sbjct: 117 LKDNEQTIG---------FYTKQIL---EGLKYLHDN---QIVHRDIKGDNVLINTYSGV 161
Query: 676 PRLSDFGLAK-IFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITG 734
++SDFG +K + G E G+ Y+ PE +D++ G ++E+ TG
Sbjct: 162 LKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATG 221
Query: 735 KKPL 738
K P
Sbjct: 222 KPPF 225
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 99/235 (42%), Gaps = 45/235 (19%)
Query: 513 GTLLAEGKFGPVYRGFLPG----GIHVAVKVLVHGSTLTDQEA-ARELEYLGRIKHPNLV 567
G + EG+FG V++G + VA+K + ++ + +E +E + + HP++V
Sbjct: 43 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 102
Query: 568 PLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSE 627
L G I + I + G L++ L V
Sbjct: 103 KLIG-VITENPVWIIMELCTLGELRSFLQ---------------------------VRKY 134
Query: 628 GLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIF 687
L + L TA LA+L S +HRDI A +V + N +L DFGL++
Sbjct: 135 SLDLASLILYAYQLSTA--LAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 189
Query: 688 GNGLDEEIARGSPGYIPPEFAQPDS-DFP--TPKSDVYCYGVVLLE-LITGKKPL 738
D + S G +P ++ P+S +F T SDV+ +GV + E L+ G KP
Sbjct: 190 E---DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 241
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 7/102 (6%)
Query: 659 IHRDIKASSVYLDMNLEPRLSDFG-LAKIFGNG-LDEEIARGSPGYIPPEFAQP-----D 711
+HRDIK ++ LD RL+DFG K+ +G + +A G+P Y+ PE Q
Sbjct: 184 VHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPG 243
Query: 712 SDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSW 753
+ P+ D + GV E+ G+ P D E G +V +
Sbjct: 244 TGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHY 285
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 58/123 (47%), Gaps = 13/123 (10%)
Query: 634 RFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDE 693
RF H++ G + +LH G I HRDIK ++ LD ++SDFGLA +F E
Sbjct: 109 RFFHQLMAG----VVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161
Query: 694 EIAR---GSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNL 750
+ G+ Y+ PE + +F DV+ G+VL ++ G+ P D P +
Sbjct: 162 RLLNKMCGTLPYVAPELLK-RREFHAEPVDVWSCGIVLTAMLAGELPW--DQPSDSCQEY 218
Query: 751 VSW 753
W
Sbjct: 219 SDW 221
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 92/229 (40%), Gaps = 37/229 (16%)
Query: 516 LAEGKFGPVYRGFLPGGI------HVAVKVLVHGSTLTDQ-EAARELEYLGRIKHPNLVP 568
L +G FG VY G G + VA+K + +++ ++ E E + ++V
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 569 LTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEG 628
L G G + I + M G+L++ L L + IQ G
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSL----RPEMENNPVLAPPSLSKMIQMAGE-- 139
Query: 629 LLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAK-IF 687
A +A+L+ + +HRD+ A + + + ++ DFG+ + I+
Sbjct: 140 --------------IADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 182
Query: 688 GNGLDEEIARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT 733
+ +G G +P + P+S T SDV+ +GVVL E+ T
Sbjct: 183 ET---DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 92/229 (40%), Gaps = 37/229 (16%)
Query: 516 LAEGKFGPVYRGFLPGGI------HVAVKVLVHGSTLTDQ-EAARELEYLGRIKHPNLVP 568
L +G FG VY G G + VA+K + +++ ++ E E + ++V
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 569 LTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEG 628
L G G + I + M G+L++ L L + IQ G
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSL----RPEMENNPVLAPPSLSKMIQMAGE-- 139
Query: 629 LLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAK-IF 687
A +A+L+ + +HRD+ A + + + ++ DFG+ + I+
Sbjct: 140 --------------IADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 182
Query: 688 GNGLDEEIARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT 733
+ +G G +P + P+S T SDV+ +GVVL E+ T
Sbjct: 183 ET---DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 98/235 (41%), Gaps = 45/235 (19%)
Query: 513 GTLLAEGKFGPVYRGFL--PGGIHVAVKVLVHGSTLTD---QEAARELEYLGRIKHPNLV 567
G + EG+FG V++G P +AV + + +D ++ +E + + HP++V
Sbjct: 18 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 77
Query: 568 PLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSE 627
L G I + I + G L++ L V
Sbjct: 78 KLIG-VITENPVWIIMELCTLGELRSFLQ---------------------------VRKY 109
Query: 628 GLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIF 687
L + L TA LA+L S +HRDI A +V + N +L DFGL++
Sbjct: 110 SLDLASLILYAYQLSTA--LAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 164
Query: 688 GNGLDEEIARGSPGYIPPEFAQPDS-DFP--TPKSDVYCYGVVLLE-LITGKKPL 738
D + S G +P ++ P+S +F T SDV+ +GV + E L+ G KP
Sbjct: 165 E---DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 216
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 99/235 (42%), Gaps = 45/235 (19%)
Query: 513 GTLLAEGKFGPVYRGFLPG----GIHVAVKVLVHGSTLTDQEA-ARELEYLGRIKHPNLV 567
G + EG+FG V++G + VA+K + ++ + +E +E + + HP++V
Sbjct: 20 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 79
Query: 568 PLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSE 627
L G I + I + G L++ L V
Sbjct: 80 KLIGV-ITENPVWIIMELCTLGELRSFLQ---------------------------VRKY 111
Query: 628 GLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIF 687
L + L TA LA+L S +HRDI A +V + N +L DFGL++
Sbjct: 112 SLDLASLILYAYQLSTA--LAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 166
Query: 688 GNGLDEEIARGSPGYIPPEFAQPDS-DFP--TPKSDVYCYGVVLLE-LITGKKPL 738
D + S G +P ++ P+S +F T SDV+ +GV + E L+ G KP
Sbjct: 167 E---DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 218
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 92/229 (40%), Gaps = 37/229 (16%)
Query: 516 LAEGKFGPVYRGFLPGGI------HVAVKVLVHGSTLTDQ-EAARELEYLGRIKHPNLVP 568
L +G FG VY G G + VA+K + +++ ++ E E + ++V
Sbjct: 55 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 114
Query: 569 LTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEG 628
L G G + I + M G+L++ L L + IQ G
Sbjct: 115 LLGVVSQGQPTLVIMELMTRGDLKSYLRSL----RPEMENNPVLAPPSLSKMIQMAGE-- 168
Query: 629 LLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAK-IF 687
A +A+L+ + +HRD+ A + + + ++ DFG+ + I+
Sbjct: 169 --------------IADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 211
Query: 688 GNGLDEEIARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT 733
+ +G G +P + P+S T SDV+ +GVVL E+ T
Sbjct: 212 ET---DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 11/97 (11%)
Query: 646 ALAFLHHGCSPPIIHRDIKASSVYLDMNLEP----RLSDFGLAKIFGNGLDEEIARGSPG 701
ALA+ H S ++H+D+K ++ L + P ++ DFGLA++F + A G+
Sbjct: 136 ALAYFH---SQHVVHKDLKPENI-LFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTAL 191
Query: 702 YIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
Y+ PE + D F K D++ GVV+ L+TG P
Sbjct: 192 YMAPEVFKRDVTF---KCDIWSAGVVMYFLLTGCLPF 225
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 98/235 (41%), Gaps = 45/235 (19%)
Query: 513 GTLLAEGKFGPVYRGFL--PGGIHVAVKVLVHGSTLTD---QEAARELEYLGRIKHPNLV 567
G + EG+FG V++G P +AV + + +D ++ +E + + HP++V
Sbjct: 15 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 74
Query: 568 PLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSE 627
L G I + I + G L++ L V
Sbjct: 75 KLIG-VITENPVWIIMELCTLGELRSFLQ---------------------------VRKY 106
Query: 628 GLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIF 687
L + L TA LA+L S +HRDI A +V + N +L DFGL++
Sbjct: 107 SLDLASLILYAYQLSTA--LAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 161
Query: 688 GNGLDEEIARGSPGYIPPEFAQPDS-DFP--TPKSDVYCYGVVLLE-LITGKKPL 738
D + S G +P ++ P+S +F T SDV+ +GV + E L+ G KP
Sbjct: 162 E---DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 213
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 98/235 (41%), Gaps = 45/235 (19%)
Query: 513 GTLLAEGKFGPVYRGFL--PGGIHVAVKVLVHGSTLTD---QEAARELEYLGRIKHPNLV 567
G + EG+FG V++G P +AV + + +D ++ +E + + HP++V
Sbjct: 12 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 71
Query: 568 PLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSE 627
L G I + I + G L++ L V
Sbjct: 72 KLIG-VITENPVWIIMELCTLGELRSFLQ---------------------------VRKY 103
Query: 628 GLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIF 687
L + L TA LA+L S +HRDI A +V + N +L DFGL++
Sbjct: 104 SLDLASLILYAYQLSTA--LAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 158
Query: 688 GNGLDEEIARGSPGYIPPEFAQPDS-DFP--TPKSDVYCYGVVLLE-LITGKKPL 738
D + S G +P ++ P+S +F T SDV+ +GV + E L+ G KP
Sbjct: 159 E---DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 210
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 98/235 (41%), Gaps = 45/235 (19%)
Query: 513 GTLLAEGKFGPVYRGFL--PGGIHVAVKVLVHGSTLTD---QEAARELEYLGRIKHPNLV 567
G + EG+FG V++G P +AV + + +D ++ +E + + HP++V
Sbjct: 17 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 76
Query: 568 PLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSE 627
L G I + I + G L++ L V
Sbjct: 77 KLIGV-ITENPVWIIMELCTLGELRSFLQ---------------------------VRKY 108
Query: 628 GLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIF 687
L + L TA LA+L S +HRDI A +V + N +L DFGL++
Sbjct: 109 SLDLASLILYAYQLSTA--LAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 163
Query: 688 GNGLDEEIARGSPGYIPPEFAQPDS-DFP--TPKSDVYCYGVVLLE-LITGKKPL 738
D + S G +P ++ P+S +F T SDV+ +GV + E L+ G KP
Sbjct: 164 E---DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 215
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 122/308 (39%), Gaps = 57/308 (18%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARE-LEYL-------GRIKHPNLV 567
L +G FG VY G I + V T+ + + RE +E+L G H ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVV 83
Query: 568 PLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSE 627
L G G + + + M +G+L++ L L + N G
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSL------------------RPEAENNPGRP 125
Query: 628 GLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAK-I 686
T + ++A A +A+L+ + +HRD+ A + + + ++ DFG+ + I
Sbjct: 126 P--PTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDI 180
Query: 687 FGNGLDEEIARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT-GKKPLGDDY 742
+ +G G +P + P+S T SD++ +GVVL E+ + ++P
Sbjct: 181 YETAY---YRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPY---- 233
Query: 743 PEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQ 802
+GL +D D P+ E + +C P RP+
Sbjct: 234 ------------QGLSNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFL 280
Query: 803 QIVGLLKD 810
+IV LLKD
Sbjct: 281 EIVNLLKD 288
>pdb|3O6N|A Chain A, Crystal Structure Of Apl1 Leucine-Rich Repeat Domain
Length = 390
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 117/257 (45%), Gaps = 38/257 (14%)
Query: 117 PAAISSLVSLRVLKLDGNMFQWSIPPGLL-NCQSLVTVDLSMNQLNGSLPDGFGAAFPKL 175
P ++ L VL L+ N S+P G+ N L T+ +S N L D F A L
Sbjct: 110 PHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQAT-TSL 167
Query: 176 KSLNLAGNEIKGRDTHFAGLKSITNLNISGNLFQGSVMGVFLESLEVIDLRSNQFQGHIS 235
++L L+ N + D + + S+ + N+S NL + + +E L+ N +G ++
Sbjct: 168 QNLQLSSNRLTHVD--LSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVN 225
Query: 236 ------QVQFNSS------YNWSRLVYVDLSENQLSGEIFHNFSQAQNLKHLSLAYNRFT 283
++Q N+ N+ LV VDLS N+L ++H F + Q L+ L ++ NR
Sbjct: 226 VELTILKLQHNNLTDTAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLV 285
Query: 284 R-----QEFPQIGTLLGLEH---LNLSRTSLIGD-IPSEILQLSSLHTLDLSMNHLTGQI 334
Q P + +L L H L++ R D + + L +S+ TL LS +H
Sbjct: 286 ALNLYGQPIPTLK-VLDLSHNHLLHVERNQPQFDRLENLYLDHNSIVTLKLSTHH----- 339
Query: 335 PTVSAKNLGIIDMSHNN 351
+ KNL +SHN+
Sbjct: 340 ---TLKNLT---LSHND 350
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 114/242 (47%), Gaps = 25/242 (10%)
Query: 42 GSVPDTTIGKLSKLQSLDLSENNITALPSDLW-SLGSLKSLNLSYNRISGSLPSNIGNFG 100
S+P KL +L +S NN+ + D + + SL++L LS NR++ +
Sbjct: 130 SSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLT--------HVD 181
Query: 101 LLEVFDLSNNNFSGEIPAAISSLVSLRVLKLDGNMFQWSIPPGLLNCQSLVTVDLSMNQL 160
L + L + N S + + ++ + + V +LD + ++ G +N + L + L N L
Sbjct: 182 LSLIPSLFHANVSYNLLSTLA--IPIAVEELDASHNSINVVRGPVNVE-LTILKLQHNNL 238
Query: 161 NGSLPDGFGAAFPKLKSLNLAGNEIKGRDTH-FAGLKSITNLNISGN-LFQGSVMGVFLE 218
+ + +P L ++L+ NE++ H F ++ + L IS N L ++ G +
Sbjct: 239 TDT---AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALNLYGQPIP 295
Query: 219 SLEVIDLRSNQFQGHISQVQFNSSYNWSRLVYVDLSENQLSGEIFHNFSQAQNLKHLSLA 278
+L+V+DL N H+ V+ N + RL + L N + + S LK+L+L+
Sbjct: 296 TLKVLDLSHN----HLLHVERNQP-QFDRLENLYLDHNSI---VTLKLSTHHTLKNLTLS 347
Query: 279 YN 280
+N
Sbjct: 348 HN 349
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
Query: 634 RFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDE 693
RF H++ G + +LH G I HRDIK ++ LD ++SDFGLA +F E
Sbjct: 109 RFFHQLMAG----VVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161
Query: 694 EIAR---GSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKP 737
+ G+ Y+ PE + +F DV+ G+VL ++ G+ P
Sbjct: 162 RLLNKMCGTLPYVAPELLK-RREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 101/248 (40%), Gaps = 50/248 (20%)
Query: 515 LLAEGKFGPVY--RGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGY 572
+L G F V+ + L G + A+K + D E+ L +IKH N+V L
Sbjct: 16 VLGSGAFSEVFLVKQRLTGKL-FALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDI 74
Query: 573 CIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTT 632
+ + + G L + + L GV IQ V S
Sbjct: 75 YESTTHYYLVMQLVSGGELFDRI--LERGVYTEKDASLV---------IQQVLS------ 117
Query: 633 WRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSV-YL--DMNLEPRLSDFGLAKIFGN 689
A+ +LH I+HRD+K ++ YL + N + ++DFGL+K+ N
Sbjct: 118 -------------AVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN 161
Query: 690 GLDEEIARGSPGYIPPE-FAQPDSDFPTPKS-DVYCYGVVLLELITGKKPLGDDYPEEKE 747
G+ A G+PGY+ PE AQ P K+ D + GV+ L+ G P + EE E
Sbjct: 162 GI-MSTACGTPGYVAPEVLAQK----PYSKAVDCWSIGVITYILLCGYPP----FYEETE 212
Query: 748 GNLVSWVR 755
L ++
Sbjct: 213 SKLFEKIK 220
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
Query: 634 RFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDE 693
RF H++ G + +LH G I HRDIK ++ LD ++SDFGLA +F E
Sbjct: 108 RFFHQLMAG----VVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 694 EIAR---GSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKP 737
+ G+ Y+ PE + +F DV+ G+VL ++ G+ P
Sbjct: 161 RLLNKMCGTLPYVAPELLK-RREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 121/307 (39%), Gaps = 55/307 (17%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARE-LEYL-------GRIKHPNLV 567
L +G FG VY G I + V T+ + + RE +E+L G H ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVV 83
Query: 568 PLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSE 627
L G G + + + M +G+L++ L L + N G
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSL------------------RPEAENNPGRP 125
Query: 628 GLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIF 687
T + ++A A +A+L+ + +HRD+ A + + + ++ DFG+ +
Sbjct: 126 P--PTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDI 180
Query: 688 GNGLDEEIARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT-GKKPLGDDYP 743
+ +G G +P + P+S T SD++ +GVVL E+ + ++P
Sbjct: 181 XE--TDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPY----- 233
Query: 744 EEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQ 803
+GL +D D P+ E + +C P RP+ +
Sbjct: 234 -----------QGLSNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPNMRPTFLE 281
Query: 804 IVGLLKD 810
IV LLKD
Sbjct: 282 IVNLLKD 288
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
Query: 634 RFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDE 693
RF H++ G + +LH G I HRDIK ++ LD ++SDFGLA +F E
Sbjct: 108 RFFHQLMAG----VVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 694 EIAR---GSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKP 737
+ G+ Y+ PE + +F DV+ G+VL ++ G+ P
Sbjct: 161 RLLNKMCGTLPYVAPELLK-RREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 58/123 (47%), Gaps = 13/123 (10%)
Query: 634 RFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDE 693
RF H++ G + +LH G I HRDIK ++ LD ++SDFGLA +F E
Sbjct: 108 RFFHQLMAG----VVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 694 EIAR---GSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNL 750
+ G+ Y+ PE + +F DV+ G+VL ++ G+ P D P +
Sbjct: 161 RLLNKMCGTLPYVAPELLK-RREFHAEPVDVWSCGIVLTAMLAGELPW--DQPSDSCQEY 217
Query: 751 VSW 753
W
Sbjct: 218 SDW 220
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 109/253 (43%), Gaps = 51/253 (20%)
Query: 507 TSNFDRGTLLAEGKFGPVYRG-FLPGGIHVAVK-VLVHGSTLTDQEAARELEYLGRIKHP 564
+S+F +LL EG +G V P G VA+K + L RE++ L KH
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 565 NLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNV 624
N++ I QR D EN N ++ +L + V
Sbjct: 70 NII-----TIFNIQRP---DSFENFNEVYIIQEL------------------MQTDLHRV 103
Query: 625 GSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLA 684
S +L+ ++ I T RA+ LH G + +IHRD+K S++ ++ N + ++ DFGLA
Sbjct: 104 ISTQMLSDDHIQYFI-YQTLRAVKVLH-GSN--VIHRDLKPSNLLINSNCDLKVCDFGLA 159
Query: 685 KIFG-------------NGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLEL 731
+I +G+ E +A + Y PE + + + DV+ G +L EL
Sbjct: 160 RIIDESAADNSEPTGQQSGMVEFVA--TRWYRAPEVMLTSAKY-SRAMDVWSCGCILAEL 216
Query: 732 ITGKKPL--GDDY 742
++P+ G DY
Sbjct: 217 FL-RRPIFPGRDY 228
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 58/123 (47%), Gaps = 13/123 (10%)
Query: 634 RFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDE 693
RF H++ G + +LH G I HRDIK ++ LD ++SDFGLA +F E
Sbjct: 108 RFFHQLMAG----VVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 694 EIAR---GSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNL 750
+ G+ Y+ PE + +F DV+ G+VL ++ G+ P D P +
Sbjct: 161 RLLNKMCGTLPYVAPELLK-RREFHAEPVDVWSCGIVLTAMLAGELPW--DQPSDSCQEY 217
Query: 751 VSW 753
W
Sbjct: 218 SDW 220
>pdb|3OJA|B Chain B, Crystal Structure Of Lrim1APL1C COMPLEX
Length = 597
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 148/349 (42%), Gaps = 66/349 (18%)
Query: 26 NKQHVTDFLASNSGLSGSVPDTTIGKLSKLQSLDLSENNITALPSDLWSLG-SLKSLNLS 84
N Q + F NS + +P + +++ L+L++ I + + ++ +++ L +
Sbjct: 51 NNQKIVTF--KNSTMR-KLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMG 107
Query: 85 YNRISGSLPSNIGNFGLLEVFDLSNNNFSGEIPAAISSLVSLRVLKLDGNMFQWSIPPGL 144
+N I P N LL V L N+ S S+P G+
Sbjct: 108 FNAIRYLPPHVFQNVPLLTVLVLERNDLS-------------------------SLPRGI 142
Query: 145 L-NCQSLVTVDLSMNQLNGSLPDGFGAAFPKLKSLNLAGNEIKGRDTHFAGLKSITNLNI 203
N L T+ +S N L D F A L++L L+ N + D + + S+ + N+
Sbjct: 143 FHNTPKLTTLSMSNNNLERIEDDTFQAT-TSLQNLQLSSNRLTHVD--LSLIPSLFHANV 199
Query: 204 SGNLFQGSVMGVFLESLEVIDLRSNQFQGHIS------QVQFNSS------YNWSRLVYV 251
S NL + + +E L+ N +G ++ ++Q N+ N+ LV V
Sbjct: 200 SYNLLSTLAIPIAVEELDASHNSINVVRGPVNVELTILKLQHNNLTDTAWLLNYPGLVEV 259
Query: 252 DLSENQLSGEIFHNFSQAQNLKHLSLAYNRFTR-----QEFPQIGTLLGLEH---LNLSR 303
DLS N+L ++H F + Q L+ L ++ NR Q P + +L L H L++ R
Sbjct: 260 DLSYNELEKIMYHPFVKMQRLERLYISNNRLVALNLYGQPIPTLK-VLDLSHNHLLHVER 318
Query: 304 TSLIGD-IPSEILQLSSLHTLDLSMNHLTGQIPTVSAKNLGIIDMSHNN 351
D + + L +S+ TL LS +H + KNL +SHN+
Sbjct: 319 NQPQFDRLENLYLDHNSIVTLKLSTHH--------TLKNLT---LSHND 356
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 58/123 (47%), Gaps = 13/123 (10%)
Query: 634 RFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDE 693
RF H++ G + +LH G I HRDIK ++ LD ++SDFGLA +F E
Sbjct: 109 RFFHQLMAG----VVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161
Query: 694 EIAR---GSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNL 750
+ G+ Y+ PE + +F DV+ G+VL ++ G+ P D P +
Sbjct: 162 RLLNKMCGTLPYVAPELLK-RREFHAEPVDVWSCGIVLTAMLAGELPW--DQPSDSCQEY 218
Query: 751 VSW 753
W
Sbjct: 219 SDW 221
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 58/123 (47%), Gaps = 13/123 (10%)
Query: 634 RFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDE 693
RF H++ G + +LH G I HRDIK ++ LD ++SDFGLA +F E
Sbjct: 109 RFFHQLMAG----VVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161
Query: 694 EIAR---GSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNL 750
+ G+ Y+ PE + +F DV+ G+VL ++ G+ P D P +
Sbjct: 162 RLLNKMCGTLPYVAPELLK-RREFHAEPVDVWSCGIVLTAMLAGELPW--DQPSDSCQEY 218
Query: 751 VSW 753
W
Sbjct: 219 SDW 221
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 58/123 (47%), Gaps = 13/123 (10%)
Query: 634 RFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDE 693
RF H++ G + +LH G I HRDIK ++ LD ++SDFGLA +F E
Sbjct: 109 RFFHQLMAG----VVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161
Query: 694 EIAR---GSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNL 750
+ G+ Y+ PE + +F DV+ G+VL ++ G+ P D P +
Sbjct: 162 RLLNKMCGTLPYVAPELLK-RREFHAEPVDVWSCGIVLTAMLAGELPW--DQPSDSCQEY 218
Query: 751 VSW 753
W
Sbjct: 219 SDW 221
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 58/123 (47%), Gaps = 13/123 (10%)
Query: 634 RFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDE 693
RF H++ G + +LH G I HRDIK ++ LD ++SDFGLA +F E
Sbjct: 107 RFFHQLMAG----VVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 159
Query: 694 EIAR---GSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNL 750
+ G+ Y+ PE + +F DV+ G+VL ++ G+ P D P +
Sbjct: 160 RLLNKMCGTLPYVAPELLK-RREFHAEPVDVWSCGIVLTAMLAGELPW--DQPSDSCQEY 216
Query: 751 VSW 753
W
Sbjct: 217 SDW 219
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
Query: 634 RFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDE 693
RF H++ G + +LH G I HRDIK ++ LD ++SDFGLA +F E
Sbjct: 109 RFFHQLMAG----VVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161
Query: 694 EIAR---GSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKP 737
+ G+ Y+ PE + +F DV+ G+VL ++ G+ P
Sbjct: 162 RLLNKMCGTLPYVAPELLK-RREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 92/229 (40%), Gaps = 37/229 (16%)
Query: 516 LAEGKFGPVYRGFLPGGI------HVAVKVLVHGSTLTDQ-EAARELEYLGRIKHPNLVP 568
L +G FG VY G G + VA+K + +++ ++ E E + ++V
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 569 LTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEG 628
L G G + I + M G+L++ L L + IQ G
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSL----RPEMENNPVLAPPSLSKMIQMAGE-- 133
Query: 629 LLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAK-IF 687
A +A+L+ + +HRD+ A + + + ++ DFG+ + I+
Sbjct: 134 --------------IADGMAYLN---ANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIY 176
Query: 688 GNGLDEEIARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT 733
+ +G G +P + P+S T SDV+ +GVVL E+ T
Sbjct: 177 ET---DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 85/233 (36%), Gaps = 43/233 (18%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAAR---ELEYLGRIKHPNLVPLTGY 572
+ G F VY+G + LT E R E E L ++HPN+V
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDS 93
Query: 573 ---CIAGDQRIA-IYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEG 628
+ G + I + + +G L+ L V
Sbjct: 94 WESTVKGKKCIVLVTELXTSGTLKTYLKRF------------------------KVXKIK 129
Query: 629 LLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNL-EPRLSDFGLAKIF 687
+L +W + L FLH +PPIIHRD+K ++++ ++ D GLA +
Sbjct: 130 VLRSW------CRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182
Query: 688 GNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGD 740
+ + G+P + PE + D DVY +G LE T + P +
Sbjct: 183 RASFAKAVI-GTPEFXAPEXYEEKYD---ESVDVYAFGXCXLEXATSEYPYSE 231
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 101/243 (41%), Gaps = 44/243 (18%)
Query: 506 ATSNFDRGTLLAEGKFGPVYRGFLPGGIH-VAVKVL--VHGSTLTDQEAARELEYLGRIK 562
ATS ++ + G +G VY+ P H VA+K + +G RE+ L R++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 563 ---HPNLVPLTGYCIAG--DQRIAIYDYME--NGNLQNLLHDLPLGVQXXXXXXXXXXXX 615
HPN+V L C D+ I + E + +L+ L P
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAP-------------PPG 108
Query: 616 XXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLE 675
+I+++ + L R L FLH C I+HRD+K ++ +
Sbjct: 109 LPAETIKDLMRQFL---------------RGLDFLHANC---IVHRDLKPENILVTSGGT 150
Query: 676 PRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
+L+DFGLA+I+ + + + Y PE S + TP D++ G + E+ +
Sbjct: 151 VKLADFGLARIYSYQMALDPVVVTLWYRAPEVLL-QSTYATP-VDMWSVGCIFAEMFR-R 207
Query: 736 KPL 738
KPL
Sbjct: 208 KPL 210
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 123/308 (39%), Gaps = 57/308 (18%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARE-LEYL-------GRIKHPNLV 567
L +G FG VY G I + V T+ + + RE +E+L G H ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVV 83
Query: 568 PLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSE 627
L G G + + + M +G+L++ L L + N G
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSL------------------RPEAENNPGRP 125
Query: 628 GLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAK-I 686
T + ++A A +A+L+ + +HRD+ A + + + ++ DFG+ + I
Sbjct: 126 P--PTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDI 180
Query: 687 FGNGLDEEIARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT-GKKPLGDDY 742
+ + +G G +P + P+S T SD++ +GVVL E+ + ++P
Sbjct: 181 YET---DYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPY---- 233
Query: 743 PEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQ 802
+GL +D D P+ E + +C P RP+
Sbjct: 234 ------------QGLSNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFL 280
Query: 803 QIVGLLKD 810
+IV LLKD
Sbjct: 281 EIVNLLKD 288
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 54/102 (52%), Gaps = 5/102 (4%)
Query: 638 KIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIAR 697
K+++ + L +L I+HRD+K S++ ++ E +L DFG++ + +
Sbjct: 127 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV- 183
Query: 698 GSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLG 739
G+ Y+ PE Q + +SD++ G+ L+E+ G+ P+G
Sbjct: 184 GTRSYMSPERLQ--GTHYSVQSDIWSMGLSLVEMAVGRYPIG 223
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 80/213 (37%), Gaps = 39/213 (18%)
Query: 535 VAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNL 594
VAVK + G + D+ RE+ ++HPN+V + + +Y G L
Sbjct: 47 VAVKYIERGEKI-DENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL--- 102
Query: 595 LHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGC 654
I N G F ++ G + A A
Sbjct: 103 -----------------------FERICNAGRFSEDEARFFFQQLISGVSYAHAM----- 134
Query: 655 SPPIIHRDIKASSVYLDMNLEPRL--SDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDS 712
+ HRD+K + LD + PRL +DFG +K + A G+P YI PE
Sbjct: 135 --QVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEVLL-KK 191
Query: 713 DFPTPKSDVYCYGVVLLELITGKKPLGDDYPEE 745
++ +DV+ GV L ++ G P D PEE
Sbjct: 192 EYDGKVADVWSCGVTLYVMLVGAYPFED--PEE 222
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 91/229 (39%), Gaps = 37/229 (16%)
Query: 516 LAEGKFGPVYRGFLPGGI------HVAVKVLVHGSTLTDQ-EAARELEYLGRIKHPNLVP 568
L +G FG VY G G + VA+K + +++ ++ E E + ++V
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 569 LTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEG 628
L G G + I + M G+L++ L L + IQ G
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSL----RPAMANNPVLAPPSLSKMIQMAGE-- 146
Query: 629 LLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAK-IF 687
A +A+L+ +HRD+ A + + + ++ DFG+ + I+
Sbjct: 147 --------------IADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 189
Query: 688 GNGLDEEIARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT 733
+ +G G +P + P+S T SDV+ +GVVL E+ T
Sbjct: 190 ET---DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 130/328 (39%), Gaps = 69/328 (21%)
Query: 504 LSATSNFDRGTLLAEGKFGPVY--RGFLPGGIHVAVKVLVHGS--TLTDQEAARELEYLG 559
+ ++ L+ EG +G V R G I VA+K + + + A RE++ L
Sbjct: 21 FQSMEKYENLGLVGEGSYGMVMKCRNKDTGRI-VAIKKFLESDDDKMVKKIAMREIKLLK 79
Query: 560 RIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXN 619
+++H NLV L C + +++++++ +L DL L
Sbjct: 80 QLRHENLVNLLEVCKKKKRWYLVFEFVDH----TILDDLELF------------------ 117
Query: 620 SIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLS 679
GL ++ K + F H S IIHRDIK ++ + + +L
Sbjct: 118 ------PNGL--DYQVVQKYLFQIINGIGFCH---SHNIIHRDIKPENILVSQSGVVKLC 166
Query: 680 DFGLAKIF---GNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKK 736
DFG A+ G D+E+A + Y PE D + DV+ G ++ E+ G +
Sbjct: 167 DFGFARTLAAPGEVYDDEVA--TRWYRAPELLVGDVKYGKA-VDVWAIGCLVTEMFMG-E 222
Query: 737 PLGDDYPEEKE-----------GNLVSWVRGLVRNN---KGSRAIDPKIRDTGP-----E 777
PL +P + + GNL+ + L N G R P+I++ P
Sbjct: 223 PL---FPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRL--PEIKEREPLERRYP 277
Query: 778 KQMEEALKIGYLCTADLPLKRPSMQQIV 805
K E + + C P KRP +++
Sbjct: 278 KLSEVVIDLAKKCLHIDPDKRPFCAELL 305
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 91/229 (39%), Gaps = 37/229 (16%)
Query: 516 LAEGKFGPVYRGFLPGGI------HVAVKVLVHGSTLTDQ-EAARELEYLGRIKHPNLVP 568
L +G FG VY G G + VA+K + +++ ++ E E + ++V
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 569 LTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEG 628
L G G + I + M G+L++ L L + IQ G
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSL----RPEMENNPVLAPPSLSKMIQMAGE-- 146
Query: 629 LLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAK-IF 687
A +A+L+ +HRD+ A + + + ++ DFG+ + I+
Sbjct: 147 --------------IADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 189
Query: 688 GNGLDEEIARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT 733
+ +G G +P + P+S T SDV+ +GVVL E+ T
Sbjct: 190 ET---DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 101/252 (40%), Gaps = 57/252 (22%)
Query: 508 SNFDRGTLLAEGKFGPVYRGFLPGGIH-------VAVKVLVHGSTLTDQEAAR---ELEY 557
S F+ +L +G FG V FL I A+KVL +TL ++ R E +
Sbjct: 24 SQFELLKVLGQGSFGKV---FLVKKISGSDARQLYAMKVL-KKATLKVRDRVRTKMERDI 79
Query: 558 LGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXX 617
L + HP +V L + I D++ G+L
Sbjct: 80 LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDL-------------------------- 113
Query: 618 XNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPR 677
+ E + T + +A A AL LH S II+RD+K ++ LD +
Sbjct: 114 ---FTRLSKEVMFTEEDVKFYLA-ELALALDHLH---SLGIIYRDLKPENILLDEEGHIK 166
Query: 678 LSDFGLAKIFGNGLDEEIAR----GSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT 733
L+DFGL+K +D E G+ Y+ PE T +D + +GV++ E++T
Sbjct: 167 LTDFGLSK---ESIDHEKKAYSFCGTVEYMAPEVVNRRGH--TQSADWWSFGVLMFEMLT 221
Query: 734 GKKPL-GDDYPE 744
G P G D E
Sbjct: 222 GTLPFQGKDRKE 233
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 54/101 (53%), Gaps = 5/101 (4%)
Query: 638 KIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIAR 697
K+++ R LA+L I+HRD+K S++ ++ E +L DFG++ + +
Sbjct: 118 KVSIAVLRGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV- 174
Query: 698 GSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
G+ Y+ PE Q + +SD++ G+ L+EL G+ P+
Sbjct: 175 GTRSYMAPERLQ--GTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|2Z66|A Chain A, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|B Chain B, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|C Chain C, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|D Chain D, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 306
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 93/218 (42%), Gaps = 26/218 (11%)
Query: 29 HVTDFLASNSGLS--GSVPDTTIGKLSKLQSLDLSENNITALPSDLWSLGSLKSLNLSYN 86
+T S++GLS G + G S L+ LDLS N + + S+ L L+ L+ +
Sbjct: 53 QLTKLSLSSNGLSFKGCCSQSDFGTTS-LKYLDLSFNGVITMSSNFLGLEQLEHLDFQH- 110
Query: 87 RISGSLPSNIGNFGLLEVF---------DLSNNNFSGEIPAAISSLVSLRVLKLDGNMFQ 137
SN+ VF D+S+ + + L SL VLK+ GN FQ
Sbjct: 111 -------SNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQ 163
Query: 138 WSIPPGLLN-CQSLVTVDLSMNQLNGSLPDGFGAAFPKLKSLNLAGNEIKGRDTH-FAGL 195
+ P + ++L +DLS QL P F + L+ LN++ N DT + L
Sbjct: 164 ENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFN-SLSSLQVLNMSHNNFFSLDTFPYKCL 222
Query: 196 KSITNLNISGNLFQGSV---MGVFLESLEVIDLRSNQF 230
S+ L+ S N S + F SL ++L N F
Sbjct: 223 NSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDF 260
Score = 38.1 bits (87), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 80/188 (42%), Gaps = 37/188 (19%)
Query: 197 SITNLNISGNLFQGSVMGVF--LESLEVIDLRSN--QFQGHISQVQFNSSYNWSRLVYVD 252
S T L + N Q GVF L L + L SN F+G SQ S + + L Y+D
Sbjct: 29 SATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQ----SDFGTTSLKYLD 84
Query: 253 LSENQLSGEIFHNFSQAQNLKHLSLAYNRFTRQ-EFPQIGTLLGLEHLNLSRT------- 304
LS N + + NF + L+HL ++ + EF +L L +L++S T
Sbjct: 85 LSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFN 143
Query: 305 ------------SLIGD------IPSEILQLSSLHTLDLSMNHLTGQIPTV--SAKNLGI 344
+ G+ +P +L +L LDLS L PT S +L +
Sbjct: 144 GIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQV 203
Query: 345 IDMSHNNL 352
++MSHNN
Sbjct: 204 LNMSHNNF 211
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 106/246 (43%), Gaps = 42/246 (17%)
Query: 116 IPAAISSLVSLRVLKLDGNMFQWSIPPGLLN-CQSLVTVDLSMNQLN--GSLPDG-FGAA 171
+P I S S L+L+ N Q S+P G+ + L + LS N L+ G FG
Sbjct: 22 VPTGIPS--SATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTT 78
Query: 172 FPKLKSLNLAGNEIKGRDTHFAGLKSITNLNIS-GNLFQGSVMGVFLE------------ 218
LK L+L+ N + ++F GL+ + +L+ NL Q S VFL
Sbjct: 79 --SLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHT 136
Query: 219 --------------SLEVIDLRSNQFQGHISQVQFNSSYNWSRLVYVDLSENQLSGEIFH 264
SLEV+ + N FQ + F N L ++DLS+ QL
Sbjct: 137 HTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRN---LTFLDLSQCQLEQLSPT 193
Query: 265 NFSQAQNLKHLSLAYNR-FTRQEFPQIGTLLGLEHLNLSRTSLIGDIPSEILQL-SSLHT 322
F+ +L+ L++++N F+ FP L L+ L+ S ++ E+ SSL
Sbjct: 194 AFNSLSSLQVLNMSHNNFFSLDTFP-YKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAF 252
Query: 323 LDLSMN 328
L+L+ N
Sbjct: 253 LNLTQN 258
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 101/252 (40%), Gaps = 57/252 (22%)
Query: 508 SNFDRGTLLAEGKFGPVYRGFLPGGIH-------VAVKVLVHGSTLTDQEAAR---ELEY 557
S F+ +L +G FG V FL I A+KVL +TL ++ R E +
Sbjct: 25 SQFELLKVLGQGSFGKV---FLVKKISGSDARQLYAMKVL-KKATLKVRDRVRTKMERDI 80
Query: 558 LGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXX 617
L + HP +V L + I D++ G+L
Sbjct: 81 LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDL-------------------------- 114
Query: 618 XNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPR 677
+ E + T + +A A AL LH S II+RD+K ++ LD +
Sbjct: 115 ---FTRLSKEVMFTEEDVKFYLA-ELALALDHLH---SLGIIYRDLKPENILLDEEGHIK 167
Query: 678 LSDFGLAKIFGNGLDEEIAR----GSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT 733
L+DFGL+K +D E G+ Y+ PE T +D + +GV++ E++T
Sbjct: 168 LTDFGLSK---ESIDHEKKAYSFCGTVEYMAPEVVNRRGH--TQSADWWSFGVLMFEMLT 222
Query: 734 GKKPL-GDDYPE 744
G P G D E
Sbjct: 223 GTLPFQGKDRKE 234
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 94/232 (40%), Gaps = 49/232 (21%)
Query: 516 LAEGKFGPVY--RGFLPGGIHVAVKVLVHGSTLTD---QEAARELEYLGRIKHPNLVPLT 570
+ G FG VY R + VA+K + + ++ Q+ +E+ +L +++HPN +
Sbjct: 23 IGHGSFGAVYFARDVRNSEV-VAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 81
Query: 571 GYCIAGDQRIAIYDYMENGNLQNLL--HDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEG 628
G + + +Y G+ +LL H PL Q V
Sbjct: 82 GCYLREHTAWLVMEYC-LGSASDLLEVHKKPL---------------------QEVEIAA 119
Query: 629 LLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFG 688
+ G + LA+LH S +IHRD+KA ++ L +L DFG A I
Sbjct: 120 ----------VTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA 166
Query: 689 NGLDEEIARGSPGYIPPE--FAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
G+P ++ PE A + + K DV+ G+ +EL K PL
Sbjct: 167 PA---NXFVGTPYWMAPEVILAMDEGQYDG-KVDVWSLGITCIELAERKPPL 214
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 646 ALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKI-FGNGLDEEIARGSPGYIP 704
AL +LH +++RD+K ++ LD + +++DFGL K +G + G+P Y+
Sbjct: 260 ALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLA 317
Query: 705 PEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
PE + D+D+ D + GVV+ E++ G+ P
Sbjct: 318 PEVLE-DNDYGRA-VDWWGLGVVMYEMMCGRLPF 349
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 646 ALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKI-FGNGLDEEIARGSPGYIP 704
AL +LH +++RD+K ++ LD + +++DFGL K +G + G+P Y+
Sbjct: 263 ALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLA 320
Query: 705 PEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
PE + D+D+ D + GVV+ E++ G+ P
Sbjct: 321 PEVLE-DNDYGRA-VDWWGLGVVMYEMMCGRLPF 352
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 99/235 (42%), Gaps = 45/235 (19%)
Query: 513 GTLLAEGKFGPVYRGFL--PGGIHVAVKVLVHGSTLTD---QEAARELEYLGRIKHPNLV 567
G + EG+FG V++G P +AV + + +D ++ +E + + HP++V
Sbjct: 15 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 74
Query: 568 PLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSE 627
L G I + I + G L++ L + ++ S
Sbjct: 75 KLIGV-ITENPVWIIMELCTLGELRSFLQVRKFSL--------------------DLASL 113
Query: 628 GLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIF 687
L A + ALA+L S +HRDI A +V + +L DFGL++
Sbjct: 114 ILY---------AYQLSTALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYM 161
Query: 688 GNGLDEEIARGSPGYIPPEFAQPDS-DFP--TPKSDVYCYGVVLLE-LITGKKPL 738
D + S G +P ++ P+S +F T SDV+ +GV + E L+ G KP
Sbjct: 162 E---DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 213
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 123/308 (39%), Gaps = 57/308 (18%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARE-LEYL-------GRIKHPNLV 567
L +G FG VY G I + V T+ + + RE +E+L G H ++V
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVV 82
Query: 568 PLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSE 627
L G G + + + M +G+L++ L L + N G
Sbjct: 83 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSL------------------RPEAENNPGRP 124
Query: 628 GLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAK-I 686
T + ++A A +A+L+ + +HRD+ A + + + ++ DFG+ + I
Sbjct: 125 P--PTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDI 179
Query: 687 FGNGLDEEIARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT-GKKPLGDDY 742
+ + +G G +P + P+S T SD++ +GVVL E+ + ++P
Sbjct: 180 YET---DYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPY---- 232
Query: 743 PEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQ 802
+GL +D D P+ E + +C P RP+
Sbjct: 233 ------------QGLSNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFL 279
Query: 803 QIVGLLKD 810
+IV LLKD
Sbjct: 280 EIVNLLKD 287
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 99/244 (40%), Gaps = 61/244 (25%)
Query: 516 LAEGKFGPVYRGFL----PGGIHVAVKVLVHGSTLTD-------QEAARELEYLGRIKHP 564
L E +FG VY+G L PG AV + TL D +E E R++HP
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAI----KTLKDKAEGPLREEFRHEAMLRARLQHP 89
Query: 565 NLVPLTGYCIAGDQRIA-IYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQN 623
N+V L G + DQ ++ I+ Y +G+L L ++ +
Sbjct: 90 NVVCLLG-VVTKDQPLSMIFSYCSHGDLHEFL-------------VMRSPHSDVGSTDDD 135
Query: 624 VGSEGLLTTWRFRHKIALGTARALAFL--HHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
+ L F H +A A + +L HH ++H+D+ +V + L ++SD
Sbjct: 136 RTVKSALEPPDFVHLVA-QIAAGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKISDL 189
Query: 682 GL---------AKIFGNGLDEEIARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLL 729
GL K+ GN L +P + P++ + SD++ YGVVL
Sbjct: 190 GLFREVYAADYYKLLGNSL-----------LPIRWMAPEAIMYGKFSIDSDIWSYGVVLW 238
Query: 730 ELIT 733
E+ +
Sbjct: 239 EVFS 242
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 100/243 (41%), Gaps = 44/243 (18%)
Query: 506 ATSNFDRGTLLAEGKFGPVYRGFLPGGIH-VAVKVL--VHGSTLTDQEAARELEYLGRIK 562
ATS ++ + G +G VY+ P H VA+K + +G RE+ L R++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 563 ---HPNLVPLTGYCIAG--DQRIAIYDYME--NGNLQNLLHDLPLGVQXXXXXXXXXXXX 615
HPN+V L C D+ I + E + +L+ L P
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAP-------------PPG 108
Query: 616 XXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLE 675
+I+++ + L R L FLH C I+HRD+K ++ +
Sbjct: 109 LPAETIKDLMRQFL---------------RGLDFLHANC---IVHRDLKPENILVTSGGT 150
Query: 676 PRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
+L+DFGLA+I+ + + Y PE S + TP D++ G + E+ +
Sbjct: 151 VKLADFGLARIYSYQMALAPVVVTLWYRAPEVLL-QSTYATP-VDMWSVGCIFAEMFR-R 207
Query: 736 KPL 738
KPL
Sbjct: 208 KPL 210
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 115/310 (37%), Gaps = 67/310 (21%)
Query: 513 GTLLAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAAR---ELEYLGRIKHPNLVPL 569
G + G FG V+ G L + V V TL A+ E L + HPN+V L
Sbjct: 119 GEQIGRGNFGEVFSGRLRAD-NTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRL 177
Query: 570 TGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGL 629
G C + + ++ G+ L +EG
Sbjct: 178 IGVCTQKQPIYIVMELVQGGDFLTFLR-----------------------------TEGA 208
Query: 630 LTTWRFRHKIAL----GTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAK 685
R R K L A + +L C IHRD+ A + + ++SDFG+++
Sbjct: 209 ----RLRVKTLLQMVGDAAAGMEYLESKCC---IHRDLAARNCLVTEKNVLKISDFGMSR 261
Query: 686 IFGNGLDEEIARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT-GKKPLGDD 741
+G+ A G +P ++ P++ + +SDV+ +G++L E + G P
Sbjct: 262 EEADGV--XAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASP---- 315
Query: 742 YPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSM 801
YP +V KG R P++ + ME+ C A P +RPS
Sbjct: 316 YPNLSNQQTREFV------EKGGRLPCPELCPDAVFRLMEQ-------CWAYEPGQRPSF 362
Query: 802 QQIVGLLKDI 811
I L+ I
Sbjct: 363 STIYQELQSI 372
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 99/235 (42%), Gaps = 45/235 (19%)
Query: 513 GTLLAEGKFGPVYRGFL--PGGIHVAVKVLVHGSTLTD---QEAARELEYLGRIKHPNLV 567
G + EG+FG V++G P +AV + + +D ++ +E + + HP++V
Sbjct: 395 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 454
Query: 568 PLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSE 627
L G I + I + G L++ L + ++ S
Sbjct: 455 KLIG-VITENPVWIIMELCTLGELRSFLQVRKFSL--------------------DLASL 493
Query: 628 GLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIF 687
L A + ALA+L S +HRDI A +V + +L DFGL++
Sbjct: 494 ILY---------AYQLSTALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYM 541
Query: 688 GNGLDEEIARGSPGYIPPEFAQPDS-DFP--TPKSDVYCYGVVLLE-LITGKKPL 738
D + S G +P ++ P+S +F T SDV+ +GV + E L+ G KP
Sbjct: 542 E---DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 593
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 643 TARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIA-RGSPG 701
TA+ ++ L H II+RD+K +V LD + R+SD GLA G + G+PG
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPG 354
Query: 702 YIPPE-FAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
++ PE + DF D + GV L E+I + P
Sbjct: 355 FMAPELLLGEEYDFSV---DYFALGVTLYEMIAARGPF 389
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 643 TARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIA-RGSPG 701
TA+ ++ L H II+RD+K +V LD + R+SD GLA G + G+PG
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPG 354
Query: 702 YIPPE-FAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
++ PE + DF D + GV L E+I + P
Sbjct: 355 FMAPELLLGEEYDFSV---DYFALGVTLYEMIAARGPF 389
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 643 TARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIA-RGSPG 701
TA+ ++ L H II+RD+K +V LD + R+SD GLA G + G+PG
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPG 354
Query: 702 YIPPE-FAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
++ PE + DF D + GV L E+I + P
Sbjct: 355 FMAPELLLGEEYDFSV---DYFALGVTLYEMIAARGPF 389
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 94/232 (40%), Gaps = 49/232 (21%)
Query: 516 LAEGKFGPVY--RGFLPGGIHVAVKVLVHGSTLTD---QEAARELEYLGRIKHPNLVPLT 570
+ G FG VY R + VA+K + + ++ Q+ +E+ +L +++HPN +
Sbjct: 62 IGHGSFGAVYFARDVRNSEV-VAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 120
Query: 571 GYCIAGDQRIAIYDYMENGNLQNLL--HDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEG 628
G + + +Y G+ +LL H PL Q V
Sbjct: 121 GCYLREHTAWLVMEYCL-GSASDLLEVHKKPL---------------------QEVEIAA 158
Query: 629 LLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFG 688
+ G + LA+LH S +IHRD+KA ++ L +L DFG A I
Sbjct: 159 ----------VTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA 205
Query: 689 NGLDEEIARGSPGYIPPE--FAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
G+P ++ PE A + + K DV+ G+ +EL K PL
Sbjct: 206 PA---NXFVGTPYWMAPEVILAMDEGQYDG-KVDVWSLGITCIELAERKPPL 253
>pdb|2Z7X|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 520
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 81/170 (47%), Gaps = 12/170 (7%)
Query: 81 LNLSYNRISGSLPSNIGNFGLLEVFDLSNNNFS--GEIPAAISSLVSLRVLKLDGNMFQW 138
L+ S N ++ ++ N G+ LE L N +I + + SL+ L + N +
Sbjct: 329 LDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSY 388
Query: 139 SIPPGLLNC---QSLVTVDLSMNQLNGSLPDGFGAAFPKLKSLNLAGNEIKGRDTHFAGL 195
G +C +SL+++++S N L ++ F P++K L+L N+IK L
Sbjct: 389 DEKKG--DCSWTKSLLSLNMSSNILTDTI---FRCLPPRIKVLDLHSNKIKSIPKQVVKL 443
Query: 196 KSITNLNISGNLFQGSVMGVF--LESLEVIDLRSNQFQGHISQVQFNSSY 243
+++ LN++ N + G+F L SL+ I L +N + ++ + S +
Sbjct: 444 EALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRW 493
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 15/122 (12%)
Query: 51 KLSKLQSLDLSENNIT--ALPSDLWSLGSLKSLNLSYNRISGS----LPSNIGNFGLLEV 104
++ LQ LD+S+N+++ D SL SLN+S N ++ + LP I +V
Sbjct: 372 QMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLPPRI------KV 425
Query: 105 FDLSNNNFSGEIPAAISSLVSLRVLKLDGNMFQWSIPPGLLN-CQSLVTVDLSMNQLNGS 163
DL +N IP + L +L+ L + N + S+P G+ + SL + L N + S
Sbjct: 426 LDLHSNKIKS-IPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCS 483
Query: 164 LP 165
P
Sbjct: 484 CP 485
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 58 LDLSENNITAL-PSDLWSLGSLKSLNLSYNRISGSLPSNIGNFGL-LEVFDLSNNNFSGE 115
L++S+N I+ L SD+ SL L+ L +S+NRI L ++ F LE DLS+N
Sbjct: 26 LNISQNYISELWTSDILSLSKLRILIISHNRIQ-YLDISVFKFNQELEYLDLSHNKL--- 81
Query: 116 IPAAISSLVSLRVLKLDGNMF 136
+ + V+L+ L L N F
Sbjct: 82 VKISCHPTVNLKHLDLSFNAF 102
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 643 TARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIA-RGSPG 701
TA+ ++ L H II+RD+K +V LD + R+SD GLA G + G+PG
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPG 354
Query: 702 YIPPE-FAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
++ PE + DF D + GV L E+I + P
Sbjct: 355 FMAPELLLGEEYDFSV---DYFALGVTLYEMIAARGPF 389
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 658 IIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTP 717
I+HRD+K ++ LD ++ +L+DFG + G G+P Y+ PE + + P
Sbjct: 145 IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEIIECSMNDNHP 204
Query: 718 ----KSDVYCYGVVLLELITGKKPL 738
+ D++ GV++ L+ G P
Sbjct: 205 GYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 97/226 (42%), Gaps = 38/226 (16%)
Query: 515 LLAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCI 574
++ G FG V++ L VA+K ++ + REL+ + +KHPN+V L +
Sbjct: 47 VIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKN----RELQIMRIVKHPNVVDLKAFFY 102
Query: 575 A-GDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTW 633
+ GD++ ++ L +L +P V ++ L+ +
Sbjct: 103 SNGDKKDEVF-------LNLVLEYVPETVYRASRHYA---------KLKQTMPMLLIKLY 146
Query: 634 RFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEP----RLSDFGLAKIFGN 689
++ R+LA++H S I HRDIK ++ LD P +L DFG AKI
Sbjct: 147 MYQ------LLRSLAYIH---SIGICHRDIKPQNLLLD---PPSGVLKLIDFGSAKILIA 194
Query: 690 GLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
G S Y PE +++ T D++ G V+ EL+ G+
Sbjct: 195 GEPNVSXICSRYYRAPELIFGATNY-TTNIDIWSTGCVMAELMQGQ 239
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 99/244 (40%), Gaps = 61/244 (25%)
Query: 516 LAEGKFGPVYRGFL----PGGIHVAVKVLVHGSTLTD-------QEAARELEYLGRIKHP 564
L E +FG VY+G L PG AV + TL D +E E R++HP
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAI----KTLKDKAEGPLREEFRHEAMLRARLQHP 72
Query: 565 NLVPLTGYCIAGDQRIA-IYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQN 623
N+V L G + DQ ++ I+ Y +G+L L ++ +
Sbjct: 73 NVVCLLG-VVTKDQPLSMIFSYCSHGDLHEFL-------------VMRSPHSDVGSTDDD 118
Query: 624 VGSEGLLTTWRFRHKIALGTARALAFL--HHGCSPPIIHRDIKASSVYLDMNLEPRLSDF 681
+ L F H +A A + +L HH ++H+D+ +V + L ++SD
Sbjct: 119 RTVKSALEPPDFVHLVA-QIAAGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKISDL 172
Query: 682 GL---------AKIFGNGLDEEIARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLL 729
GL K+ GN L +P + P++ + SD++ YGVVL
Sbjct: 173 GLFREVYAADYYKLLGNSL-----------LPIRWMAPEAIMYGKFSIDSDIWSYGVVLW 221
Query: 730 ELIT 733
E+ +
Sbjct: 222 EVFS 225
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 101/252 (40%), Gaps = 57/252 (22%)
Query: 508 SNFDRGTLLAEGKFGPVYRGFLPGGIH-------VAVKVLVHGSTLTDQEAAR---ELEY 557
S F+ +L +G FG V FL I A+KVL +TL ++ R E +
Sbjct: 24 SQFELLKVLGQGSFGKV---FLVKKISGSDARQLYAMKVL-KKATLKVRDRVRTKMERDI 79
Query: 558 LGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXX 617
L + HP +V L + I D++ G+L
Sbjct: 80 LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDL-------------------------- 113
Query: 618 XNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPR 677
+ E + T + +A A AL LH S II+RD+K ++ LD +
Sbjct: 114 ---FTRLSKEVMFTEEDVKFYLA-ELALALDHLH---SLGIIYRDLKPENILLDEEGHIK 166
Query: 678 LSDFGLAKIFGNGLDEEIAR----GSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT 733
L+DFGL+K +D E G+ Y+ PE T +D + +GV++ E++T
Sbjct: 167 LTDFGLSK---ESIDHEKKAYSFCGTVEYMAPEVVNRRGH--TQSADWWSFGVLMFEMLT 221
Query: 734 GKKPL-GDDYPE 744
G P G D E
Sbjct: 222 GTLPFQGKDRKE 233
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 95/233 (40%), Gaps = 48/233 (20%)
Query: 515 LLAEGKFGPVYRGFLPGGI---HVAVKVLVHGSTLTDQEAA--RELEYLGRIKHPNLVPL 569
+L +G FG V + I AVKV+ S + RE+E L ++ HPN++ L
Sbjct: 29 MLGKGSFGEVLK--CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL 86
Query: 570 TGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGL 629
++ +E+ + ++ +L G + + +
Sbjct: 87 -------------FEILEDSSSFYIVGELYTGGELF---------------------DEI 112
Query: 630 LTTWRF-RHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLD---MNLEPRLSDFGLAK 685
+ RF H A + + + + I+HRD+K ++ L+ + + ++ DFGL+
Sbjct: 113 IKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLST 172
Query: 686 IFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
F + G+ YI PE + D K DV+ GV+L L++G P
Sbjct: 173 CFQQNTKMKDRIGTAYYIAPEVLRGTYD---EKCDVWSAGVILYILLSGTPPF 222
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 8/102 (7%)
Query: 646 ALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAK--IFGNGLDEEIARGSPGYI 703
L FLH S I++RD+K ++ LD + +++DFG+ K + G+ G+P YI
Sbjct: 130 GLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFC-GTPDYI 185
Query: 704 PPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEE 745
PE D + +GV+L E++ G+ P EE
Sbjct: 186 APEILLGQK--YNHSVDWWSFGVLLYEMLIGQSPFHGQDEEE 225
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 72/167 (43%), Gaps = 25/167 (14%)
Query: 643 TARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGY 702
A+ + FL S IHRD+ A ++ L ++ DFGLA+ D + R
Sbjct: 200 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK--DPDYVRKGDAR 254
Query: 703 IPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNLVSWVRGLV 758
+P ++ P++ F T +SDV+ +GV+L E+ + G P YP G+
Sbjct: 255 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP----YP------------GVK 298
Query: 759 RNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIV 805
+ + R + R P+ E + C P +RP+ ++V
Sbjct: 299 IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 345
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 115/310 (37%), Gaps = 67/310 (21%)
Query: 513 GTLLAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAAR---ELEYLGRIKHPNLVPL 569
G + G FG V+ G L + V V TL A+ E L + HPN+V L
Sbjct: 119 GEQIGRGNFGEVFSGRLRAD-NTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRL 177
Query: 570 TGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGL 629
G C + + ++ G+ L +EG
Sbjct: 178 IGVCTQKQPIYIVMELVQGGDFLTFLR-----------------------------TEGA 208
Query: 630 LTTWRFRHKIAL----GTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAK 685
R R K L A + +L C IHRD+ A + + ++SDFG+++
Sbjct: 209 ----RLRVKTLLQMVGDAAAGMEYLESKCC---IHRDLAARNCLVTEKNVLKISDFGMSR 261
Query: 686 IFGNGLDEEIARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT-GKKPLGDD 741
+G+ A G +P ++ P++ + +SDV+ +G++L E + G P
Sbjct: 262 EEADGV--YAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASP---- 315
Query: 742 YPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSM 801
YP +V KG R P++ + ME+ C A P +RPS
Sbjct: 316 YPNLSNQQTREFV------EKGGRLPCPELCPDAVFRLMEQ-------CWAYEPGQRPSF 362
Query: 802 QQIVGLLKDI 811
I L+ I
Sbjct: 363 STIYQELQSI 372
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 9/97 (9%)
Query: 646 ALAFLHHGCSPPIIHRDIKASSVYLDMN---LEPRLSDFGLAKIFGNGLDEEIARGSPGY 702
+ +LH I+HRDIK ++ L+ L ++ DFGL+ F G+ Y
Sbjct: 158 GICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYY 214
Query: 703 IPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLG 739
I PE + + K DV+ GV++ L+ G P G
Sbjct: 215 IAPEVLKKKYN---EKCDVWSCGVIMYILLCGYPPFG 248
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 658 IIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTP 717
I+HRD+K ++ LD ++ +L+DFG + G G+P Y+ PE + + P
Sbjct: 145 IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHP 204
Query: 718 ----KSDVYCYGVVLLELITGKKPL 738
+ D++ GV++ L+ G P
Sbjct: 205 GYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 643 TARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGY 702
T ALA LH S ++H D+K ++++L +L DFGL G E+ G P Y
Sbjct: 166 TLLALAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPRY 222
Query: 703 IPPEFAQPDSDFPTPKSDVYCYGVVLLEL 731
+ PE Q + T +DV+ G+ +LE+
Sbjct: 223 MAPELLQ--GSYGT-AADVFSLGLTILEV 248
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 92/225 (40%), Gaps = 41/225 (18%)
Query: 516 LAEGKFGPVYRGF--LPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYC 573
L EG + VY+G L + ++ + A RE+ L +KH N+V L
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII 69
Query: 574 IAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTW 633
+++Y++ +L+ L D +I N+ + L
Sbjct: 70 HTEKSLTLVFEYLDK-DLKQYLDDC--------------------GNIINMHNVKLF--- 105
Query: 634 RFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAK---IFGNG 690
R LA+ H ++HRD+K ++ ++ E +L+DFGLA+ I
Sbjct: 106 ------LFQLLRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKT 156
Query: 691 LDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
D E+ + Y PP+ +D+ T + D++ G + E+ TG+
Sbjct: 157 YDNEVV--TLWYRPPDILLGSTDYST-QIDMWGVGCIFYEMATGR 198
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 658 IIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTP 717
I+HRD+K ++ LD ++ +L+DFG + G G+P Y+ PE + + P
Sbjct: 132 IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHP 191
Query: 718 ----KSDVYCYGVVLLELITGKKPL 738
+ D++ GV++ L+ G P
Sbjct: 192 GYGKEVDMWSTGVIMYTLLAGSPPF 216
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 72/167 (43%), Gaps = 25/167 (14%)
Query: 643 TARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGY 702
A+ + FL S IHRD+ A ++ L ++ DFGLA+ D + R
Sbjct: 202 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK--DPDYVRKGDAR 256
Query: 703 IPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNLVSWVRGLV 758
+P ++ P++ F T +SDV+ +GV+L E+ + G P YP G+
Sbjct: 257 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP----YP------------GVK 300
Query: 759 RNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIV 805
+ + R + R P+ E + C P +RP+ ++V
Sbjct: 301 IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 347
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 646 ALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKI-FGNGLDEEIARGSPGYIP 704
AL +LH +++RD+K ++ LD + +++DFGL K +G + G+P Y+
Sbjct: 121 ALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLA 178
Query: 705 PEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
PE + D+D+ D + GVV+ E++ G+ P
Sbjct: 179 PEVLE-DNDYGRA-VDWWGLGVVMYEMMCGRLPF 210
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 94/234 (40%), Gaps = 34/234 (14%)
Query: 508 SNFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNL 566
N DR +L +G +G VY G L + +A+K + + Q E+ +KH N+
Sbjct: 9 ENGDR-VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNI 67
Query: 567 VPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGS 626
V G + ENG ++ + +P G ++ Q +G
Sbjct: 68 VQYLG------------SFSENGFIKIFMEQVPGG---SLSALLRSKWGPLKDNEQTIG- 111
Query: 627 EGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLD-MNLEPRLSDFGLAK 685
F K L L +LH I+HRDIK +V ++ + ++SDFG +K
Sbjct: 112 --------FYTKQIL---EGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSK 157
Query: 686 -IFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
+ G E G+ Y+ PE +D++ G ++E+ TGK P
Sbjct: 158 RLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 211
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 646 ALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKI-FGNGLDEEIARGSPGYIP 704
AL +LH +++RD+K ++ LD + +++DFGL K +G + G+P Y+
Sbjct: 120 ALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLA 177
Query: 705 PEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
PE + D+D+ D + GVV+ E++ G+ P
Sbjct: 178 PEVLE-DNDYGRA-VDWWGLGVVMYEMMCGRLPF 209
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 4/103 (3%)
Query: 643 TARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLA-KIFGNGLDE-EIARGSP 700
TA + L S +IHRD+K ++ LD + +L+DFG K+ G+ + A G+P
Sbjct: 180 TAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTP 239
Query: 701 GYIPPEF--AQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDD 741
YI PE +Q + + D + GV L E++ G P D
Sbjct: 240 DYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYAD 282
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 54/100 (54%), Gaps = 10/100 (10%)
Query: 646 ALAFLHHGCSPPIIHRDIKASSVYLDMNLEP----RLSDFGLAKIFGNGLDEEIARGSPG 701
A+A+LH I+HRD+K ++ L P +++DFGL+KI + + + G+PG
Sbjct: 160 AVAYLHEN---GIVHRDLKPENL-LYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPG 215
Query: 702 YIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDD 741
Y PE + + P+ D++ G++ L+ G +P D+
Sbjct: 216 YCAPEILRGCA--YGPEVDMWSVGIITYILLCGFEPFYDE 253
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 98/238 (41%), Gaps = 48/238 (20%)
Query: 509 NFDRGTLLAEGKFGPVYRG--FLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNL 566
+F L+ G FG V++ + G +V +V +++A RE++ L ++ H N+
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRV-----KYNNEKAEREVKALAKLDHVNI 66
Query: 567 VPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQ-NVG 625
V G C G +DY + +N IQ
Sbjct: 67 VHYNG-CWDG------FDYDPETSSKN-----------------SSRSKTKCLFIQMEFC 102
Query: 626 SEGLLTTWRFRHK-------IAL----GTARALAFLHHGCSPPIIHRDIKASSVYLDMNL 674
+G L W + + +AL + + ++H S +I+RD+K S+++L
Sbjct: 103 DKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTK 159
Query: 675 EPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELI 732
+ ++ DFGL N ++G+ Y+ PE Q S + D+Y G++L EL+
Sbjct: 160 QVKIGDFGLVTSLKNDGKRXRSKGTLRYMSPE--QISSQDYGKEVDLYALGLILAELL 215
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 100/243 (41%), Gaps = 44/243 (18%)
Query: 506 ATSNFDRGTLLAEGKFGPVYRGFLPGGIH-VAVKVL--VHGSTLTDQEAARELEYLGRIK 562
ATS ++ + G +G VY+ P H VA+K + +G RE+ L R++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 563 ---HPNLVPLTGYCIAG--DQRIAIYDYME--NGNLQNLLHDLPLGVQXXXXXXXXXXXX 615
HPN+V L C D+ I + E + +L+ L P
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAP-------------PPG 108
Query: 616 XXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLE 675
+I+++ + L R L FLH C I+HRD+K ++ +
Sbjct: 109 LPAETIKDLMRQFL---------------RGLDFLHANC---IVHRDLKPENILVTSGGT 150
Query: 676 PRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
+L+DFGLA+I+ + + Y PE S + TP D++ G + E+ +
Sbjct: 151 VKLADFGLARIYSYQMALFPVVVTLWYRAPEVLL-QSTYATP-VDMWSVGCIFAEMFR-R 207
Query: 736 KPL 738
KPL
Sbjct: 208 KPL 210
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 81/213 (38%), Gaps = 39/213 (18%)
Query: 535 VAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNL 594
VAVK + G+ + D+ RE+ ++HPN+V + I +Y G L
Sbjct: 48 VAVKYIERGAAI-DENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGEL--- 103
Query: 595 LHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGC 654
I N G F ++ G +++ H
Sbjct: 104 -----------------------YERICNAGRFSEDEARFFFQQLLSG----VSYCH--- 133
Query: 655 SPPIIHRDIKASSVYLDMNLEPRL--SDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDS 712
S I HRD+K + LD + PRL DFG +K + G+P YI PE
Sbjct: 134 SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLL-RQ 192
Query: 713 DFPTPKSDVYCYGVVLLELITGKKPLGDDYPEE 745
++ +DV+ GV L ++ G P D PEE
Sbjct: 193 EYDGKIADVWSCGVTLYVMLVGAYPFED--PEE 223
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 646 ALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKI-FGNGLDEEIARGSPGYIP 704
AL +LH +++RD+K ++ LD + +++DFGL K +G + G+P Y+
Sbjct: 122 ALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLA 179
Query: 705 PEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
PE + D+D+ D + GVV+ E++ G+ P
Sbjct: 180 PEVLE-DNDYGRA-VDWWGLGVVMYEMMCGRLPF 211
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 96/260 (36%), Gaps = 67/260 (25%)
Query: 504 LSATSNFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHG--------------STLTD 548
L S+F+ +L +G FG V + + A+K + H ++L
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNH 61
Query: 549 QEAARELEYLGRIKHPNLV-PLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXX 607
Q R Y ++ N V P+T I + +Y EN L +L+H L Q
Sbjct: 62 QYVVRY--YAAWLERRNFVKPMTAVKKKSTLFIQM-EYCENRTLYDLIHSENLNQQRD-- 116
Query: 608 XXXXXXXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASS 667
WR +I AL+++H S IIHRD+K +
Sbjct: 117 -----------------------EYWRLFRQIL----EALSYIH---SQGIIHRDLKPMN 146
Query: 668 VYLDMNLEPRLSDFGLAKIFGNGLD---------------EEIARGSPGYIPPEFAQPDS 712
+++D + ++ DFGLAK LD A G+ Y+ E
Sbjct: 147 IFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTG 206
Query: 713 DFPTPKSDVYCYGVVLLELI 732
+ K D+Y G++ E+I
Sbjct: 207 HY-NEKIDMYSLGIIFFEMI 225
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 72/167 (43%), Gaps = 25/167 (14%)
Query: 643 TARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGY 702
A+ + FL S IHRD+ A ++ L ++ DFGLA+ D + R
Sbjct: 207 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK--DPDYVRKGDAR 261
Query: 703 IPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNLVSWVRGLV 758
+P ++ P++ F T +SDV+ +GV+L E+ + G P YP G+
Sbjct: 262 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP----YP------------GVK 305
Query: 759 RNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIV 805
+ + R + R P+ E + C P +RP+ ++V
Sbjct: 306 IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 352
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 72/167 (43%), Gaps = 25/167 (14%)
Query: 643 TARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGY 702
A+ + FL S IHRD+ A ++ L ++ DFGLA+ D + R
Sbjct: 209 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK--DPDYVRKGDAR 263
Query: 703 IPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNLVSWVRGLV 758
+P ++ P++ F T +SDV+ +GV+L E+ + G P YP G+
Sbjct: 264 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP----YP------------GVK 307
Query: 759 RNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIV 805
+ + R + R P+ E + C P +RP+ ++V
Sbjct: 308 IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 354
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 115/269 (42%), Gaps = 57/269 (21%)
Query: 507 TSNFDRGTLLAEGKFGPVYRG-FLPGGIHVAVKVLV-----HGSTLTDQEAARELEYLGR 560
S +++ + +G FG V++ G VA+K ++ G +T A RE++ L
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPIT---ALREIKILQL 73
Query: 561 IKHPNLVPLTGYCIAGDQ-----RIAIY---DYMENGNLQNLLHDLPLGVQXXXXXXXXX 612
+KH N+V L C + +IY D+ E HDL
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKASIYLVFDFCE--------HDL-------------- 111
Query: 613 XXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDM 672
+ NV + L+ + ++ L L ++H I+HRD+KA++V +
Sbjct: 112 -----AGLLSNVLVKFTLSEIKRVMQMLLN---GLYYIHRN---KILHRDMKAANVLITR 160
Query: 673 NLEPRLSDFGLAKIFGNGLDEEIARG-----SPGYIPPEFAQPDSDFPTPKSDVYCYGVV 727
+ +L+DFGLA+ F + + R + Y PPE + D+ P D++ G +
Sbjct: 161 DGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDY-GPPIDLWGAGCI 219
Query: 728 LLELITGKKPLGDDYPEEKEGNLVSWVRG 756
+ E+ T + P+ E+ + L+S + G
Sbjct: 220 MAEMWT-RSPIMQGNTEQHQLALISQLCG 247
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 123/327 (37%), Gaps = 65/327 (19%)
Query: 505 SATSNFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHG--STLTDQEAARELEYLGRI 561
S T + L +G F V R +P G A K++ S Q+ RE +
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 562 KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSI 621
KHPN+V L +D + L+ DL G +
Sbjct: 61 KHPNIVRL-------------HDSISEEGFHYLVFDLVTGGEL----------------F 91
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYL---DMNLEPRL 678
+++ + + H I + L ++H I+HRD+K ++ L +L
Sbjct: 92 EDIVAREYYSEADASHCIQ----QILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKL 147
Query: 679 SDFGLA-KIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKP 737
+DFGLA ++ G+ G+PGY+ PE + D + P D++ GV+L L+ G P
Sbjct: 148 ADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDP-YGKP-VDMWACGVILYILLVGYPP 205
Query: 738 LGD---------------DYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEE 782
D D+P + + + L+ NK I+P R T E
Sbjct: 206 FWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLI--NK-MLTINPAKRITA-----SE 257
Query: 783 ALKIGYLCTADLPLKRPSMQQIVGLLK 809
ALK ++C Q+ V LK
Sbjct: 258 ALKHPWICQRSTVASMMHRQETVDCLK 284
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 113/269 (42%), Gaps = 57/269 (21%)
Query: 507 TSNFDRGTLLAEGKFGPVYRG-FLPGGIHVAVKVLV-----HGSTLTDQEAARELEYLGR 560
S +++ + +G FG V++ G VA+K ++ G +T A RE++ L
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPIT---ALREIKILQL 73
Query: 561 IKHPNLVPLTGYCIAGDQRI--------AIYDYMENGNLQNLLHDLPLGVQXXXXXXXXX 612
+KH N+V L C ++D+ E HDL
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCE--------HDL-------------- 111
Query: 613 XXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDM 672
+ NV + L+ + ++ L L ++H I+HRD+KA++V +
Sbjct: 112 -----AGLLSNVLVKFTLSEIKRVMQMLLN---GLYYIHRN---KILHRDMKAANVLITR 160
Query: 673 NLEPRLSDFGLAKIFGNGLDEEIARG-----SPGYIPPEFAQPDSDFPTPKSDVYCYGVV 727
+ +L+DFGLA+ F + + R + Y PPE + D+ P D++ G +
Sbjct: 161 DGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDY-GPPIDLWGAGCI 219
Query: 728 LLELITGKKPLGDDYPEEKEGNLVSWVRG 756
+ E+ T + P+ E+ + L+S + G
Sbjct: 220 MAEMWT-RSPIMQGNTEQHQLALISQLCG 247
>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|J Chain J, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|K Chain K, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|L Chain L, Nuclease Module Of The Yeast Ccr4-Not Complex
Length = 727
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
Query: 49 IGKLSKLQSLDLSENNITALPSDLWSLGSLKSLNLSYNRISGSLPSNIGNFGLLEVFDLS 108
I K L L L+ N++T LP+++ +L +L+ L+LS+NR++ SLP+ +G+ L+ F
Sbjct: 243 IFKYDFLTRLYLNGNSLTELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFF 301
Query: 109 NNNFSGEIPAAISSLVSLRVLKLDGN 134
+N + +P +L +L+ L ++GN
Sbjct: 302 DNMVTT-LPWEFGNLCNLQFLGVEGN 326
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 123/308 (39%), Gaps = 57/308 (18%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARE-LEYL-------GRIKHPNLV 567
L +G FG VY G I + V T+ + + RE +E+L G H ++V
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVV 84
Query: 568 PLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSE 627
L G G + + + M +G+L++ L L + N G
Sbjct: 85 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSL------------------RPEAENNPGRP 126
Query: 628 GLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAK-I 686
T + ++A A +A+L+ + +HR++ A + + + ++ DFG+ + I
Sbjct: 127 P--PTLQEMIQMAAEIADGMAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDI 181
Query: 687 FGNGLDEEIARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT-GKKPLGDDY 742
+ + +G G +P + P+S T SD++ +GVVL E+ + ++P
Sbjct: 182 YET---DYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPY---- 234
Query: 743 PEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQ 802
+GL +D D P+ E + +C P RP+
Sbjct: 235 ------------QGLSNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPNMRPTFL 281
Query: 803 QIVGLLKD 810
+IV LLKD
Sbjct: 282 EIVNLLKD 289
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 51/115 (44%), Gaps = 16/115 (13%)
Query: 658 IIHRDIKASSVYLDMNLEP---RLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDF 714
I+HRD+K ++ L+ ++ DFGL+ F G + G+ YI PE + D
Sbjct: 125 IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRKKYD- 183
Query: 715 PTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDP 769
K DV+ GV+L L+ G P G +E L R KG + DP
Sbjct: 184 --EKCDVWSCGVILYILLCGYPPFGGQTDQEI----------LKRVEKGKFSFDP 226
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 4/103 (3%)
Query: 643 TARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLA-KIFGNGLDE-EIARGSP 700
TA + L S IHRD+K ++ LD + +L+DFG K+ G+ + A G+P
Sbjct: 179 TAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTP 238
Query: 701 GYIPPEF--AQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDD 741
YI PE +Q + + D + GV L E++ G P D
Sbjct: 239 DYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD 281
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 51/115 (44%), Gaps = 16/115 (13%)
Query: 658 IIHRDIKASSVYLDMNLEP---RLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDF 714
I+HRD+K ++ L+ ++ DFGL+ F G + G+ YI PE + D
Sbjct: 142 IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRKKYD- 200
Query: 715 PTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDP 769
K DV+ GV+L L+ G P G +E L R KG + DP
Sbjct: 201 --EKCDVWSCGVILYILLCGYPPFGGQTDQEI----------LKRVEKGKFSFDP 243
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 123/308 (39%), Gaps = 57/308 (18%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARE-LEYL-------GRIKHPNLV 567
L +G FG VY G I + V T+ + + RE +E+L G H ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVV 83
Query: 568 PLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSE 627
L G G + + + M +G+L++ L L + N G
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSL------------------RPEAENNPGRP 125
Query: 628 GLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAK-I 686
T + ++A A +A+L+ + +HR++ A + + + ++ DFG+ + I
Sbjct: 126 P--PTLQEMIQMAAEIADGMAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDI 180
Query: 687 FGNGLDEEIARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT-GKKPLGDDY 742
+ + +G G +P + P+S T SD++ +GVVL E+ + ++P
Sbjct: 181 YET---DYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPY---- 233
Query: 743 PEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQ 802
+GL +D D P+ E + +C P RP+
Sbjct: 234 ------------QGLSNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPNMRPTFL 280
Query: 803 QIVGLLKD 810
+IV LLKD
Sbjct: 281 EIVNLLKD 288
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 4/103 (3%)
Query: 643 TARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLA-KIFGNGLDE-EIARGSP 700
TA + L S IHRD+K ++ LD + +L+DFG K+ G+ + A G+P
Sbjct: 179 TAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTP 238
Query: 701 GYIPPEF--AQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDD 741
YI PE +Q + + D + GV L E++ G P D
Sbjct: 239 DYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD 281
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 4/103 (3%)
Query: 643 TARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLA-KIFGNGLDE-EIARGSP 700
TA + L S IHRD+K ++ LD + +L+DFG K+ G+ + A G+P
Sbjct: 174 TAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTP 233
Query: 701 GYIPPEF--AQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDD 741
YI PE +Q + + D + GV L E++ G P D
Sbjct: 234 DYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD 276
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 100/236 (42%), Gaps = 49/236 (20%)
Query: 515 LLAEGKFGPVYRGFL----PGGIHVAVKVLVHGSTLTDQEA-ARELEYLGRIKHPNLVPL 569
++ +G FG VY G I A+K L + + EA RE + + HPN++ L
Sbjct: 28 VIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLAL 87
Query: 570 TGYCIAGDQRI-AIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEG 628
G + + + YM +G+L + + +N +
Sbjct: 88 IGIMLPPEGLPHVLLPYMCHGDLLQFIR----------------------SPQRNPTVKD 125
Query: 629 LLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFG 688
L++ L AR + +L +HRD+ A + LD + +++DFGLA+
Sbjct: 126 LIS-------FGLQVARGMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLAR--- 172
Query: 689 NGLDEE---IARGSPGYIPPEFAQPDS----DFPTPKSDVYCYGVVLLELITGKKP 737
+ LD E + + +P ++ +S F T KSDV+ +GV+L EL+T P
Sbjct: 173 DILDREYYSVQQHRHARLPVKWTALESLQTYRF-TTKSDVWSFGVLLWELLTRGAP 227
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 53/100 (53%), Gaps = 5/100 (5%)
Query: 638 KIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIAR 697
K+++ + L +L I+HRD+K S++ ++ E +L DFG++ + + E
Sbjct: 111 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFV- 167
Query: 698 GSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKP 737
G+ Y+ PE Q + +SD++ G+ L+E+ G+ P
Sbjct: 168 GTRSYMSPERLQ--GTHYSVQSDIWSMGLSLVEMAVGRYP 205
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 113/269 (42%), Gaps = 57/269 (21%)
Query: 507 TSNFDRGTLLAEGKFGPVYRG-FLPGGIHVAVKVLV-----HGSTLTDQEAARELEYLGR 560
S +++ + +G FG V++ G VA+K ++ G +T A RE++ L
Sbjct: 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPIT---ALREIKILQL 72
Query: 561 IKHPNLVPLTGYCI--------AGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXX 612
+KH N+V L C ++D+ E HDL
Sbjct: 73 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCE--------HDL-------------- 110
Query: 613 XXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDM 672
+ NV + L+ + ++ L L ++H I+HRD+KA++V +
Sbjct: 111 -----AGLLSNVLVKFTLSEIKRVMQMLLN---GLYYIHRN---KILHRDMKAANVLITR 159
Query: 673 NLEPRLSDFGLAKIFGNGLDEEIARG-----SPGYIPPEFAQPDSDFPTPKSDVYCYGVV 727
+ +L+DFGLA+ F + + R + Y PPE + D+ P D++ G +
Sbjct: 160 DGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDY-GPPIDLWGAGCI 218
Query: 728 LLELITGKKPLGDDYPEEKEGNLVSWVRG 756
+ E+ T + P+ E+ + L+S + G
Sbjct: 219 MAEMWT-RSPIMQGNTEQHQLALISQLCG 246
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 98/238 (41%), Gaps = 57/238 (23%)
Query: 515 LLAEGKFGPVY--RGFLPGGIHVAVKVLVHGSTL--TDQEAA-RELEYLGRIKHPNLVPL 569
+L +G FG V + + G AVKV+ TD+E+ RE++ L ++ HPN++ L
Sbjct: 33 VLGKGSFGEVILCKDKITGQ-ECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 91
Query: 570 TGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGL 629
Y++ E+ L+ ++ G + + +
Sbjct: 92 -------------YEFFEDKGYFYLVGEVYTGGELF---------------------DEI 117
Query: 630 LTTWRFRHKIALGTAR----ALAFLHHGCSPPIIHRDIKASSVYL-----DMNLEPRLSD 680
++ RF A R + ++H I+HRD+K ++ L D N+ R+ D
Sbjct: 118 ISRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANI--RIID 172
Query: 681 FGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
FGL+ F + G+ YI PE D K DV+ GV+L L++G P
Sbjct: 173 FGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYD---EKCDVWSTGVILYILLSGCPPF 227
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 123/327 (37%), Gaps = 65/327 (19%)
Query: 505 SATSNFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVL--VHGSTLTDQEAARELEYLGRI 561
S T + L +G F V R +P G A K++ S Q+ RE +
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 562 KHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSI 621
KHPN+V L +D + L+ DL G +
Sbjct: 61 KHPNIVRL-------------HDSISEEGFHYLVFDLVTGGEL----------------F 91
Query: 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYL---DMNLEPRL 678
+++ + + H I + L ++H I+HRD+K ++ L +L
Sbjct: 92 EDIVAREYYSEADASHCIQ----QILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKL 147
Query: 679 SDFGLA-KIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKP 737
+DFGLA ++ G+ G+PGY+ PE + D + P D++ GV+L L+ G P
Sbjct: 148 ADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDP-YGKP-VDMWACGVILYILLVGYPP 205
Query: 738 LGD---------------DYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEE 782
D D+P + + + L+ NK I+P R T E
Sbjct: 206 FWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLI--NK-MLTINPAKRITA-----SE 257
Query: 783 ALKIGYLCTADLPLKRPSMQQIVGLLK 809
ALK ++C Q+ V LK
Sbjct: 258 ALKHPWICQRSTVASMMHRQETVDCLK 284
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 113/269 (42%), Gaps = 57/269 (21%)
Query: 507 TSNFDRGTLLAEGKFGPVYRG-FLPGGIHVAVKVLV-----HGSTLTDQEAARELEYLGR 560
S +++ + +G FG V++ G VA+K ++ G +T A RE++ L
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPIT---ALREIKILQL 73
Query: 561 IKHPNLVPLTGYCI--------AGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXX 612
+KH N+V L C ++D+ E HDL
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCE--------HDL-------------- 111
Query: 613 XXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDM 672
+ NV + L+ + ++ L L ++H I+HRD+KA++V +
Sbjct: 112 -----AGLLSNVLVKFTLSEIKRVMQMLLN---GLYYIHRN---KILHRDMKAANVLITR 160
Query: 673 NLEPRLSDFGLAKIFGNGLDEEIARG-----SPGYIPPEFAQPDSDFPTPKSDVYCYGVV 727
+ +L+DFGLA+ F + + R + Y PPE + D+ P D++ G +
Sbjct: 161 DGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDY-GPPIDLWGAGCI 219
Query: 728 LLELITGKKPLGDDYPEEKEGNLVSWVRG 756
+ E+ T + P+ E+ + L+S + G
Sbjct: 220 MAEMWT-RSPIMQGNTEQHQLALISQLCG 247
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 95/233 (40%), Gaps = 48/233 (20%)
Query: 515 LLAEGKFGPVYRGFLPGGI---HVAVKVLVHGSTLTDQEAA--RELEYLGRIKHPNLVPL 569
+L +G FG V + I AVKV+ S + RE+E L ++ HPN++ L
Sbjct: 29 MLGKGSFGEVLK--CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL 86
Query: 570 TGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGL 629
++ +E+ + ++ +L G + + +
Sbjct: 87 -------------FEILEDSSSFYIVGELYTGGELF---------------------DEI 112
Query: 630 LTTWRF-RHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLD---MNLEPRLSDFGLAK 685
+ RF H A + + + + I+HRD+K ++ L+ + + ++ DFGL+
Sbjct: 113 IKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLST 172
Query: 686 IFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
F + G+ YI PE + D K DV+ GV+L L++G P
Sbjct: 173 CFQQNTKMKDRIGTAYYIAPEVLRGTYD---EKCDVWSAGVILYILLSGTPPF 222
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 71/148 (47%), Gaps = 24/148 (16%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIAR--GSPGY 702
+ + +LH+ IIHRDIK S++ + + +++DFG++ F G D ++ G+P +
Sbjct: 148 KGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEF-KGSDALLSNTVGTPAF 203
Query: 703 IPPE-FAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGD---------------DYPEEK 746
+ PE ++ F DV+ GV L + G+ P D ++P++
Sbjct: 204 MAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFPDQP 263
Query: 747 E--GNLVSWVRGLVRNNKGSRAIDPKIR 772
+ +L + ++ N SR + P+I+
Sbjct: 264 DIAEDLKDLITRMLDKNPESRIVVPEIK 291
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 95/233 (40%), Gaps = 48/233 (20%)
Query: 515 LLAEGKFGPVYRGFLPGGI---HVAVKVLVHGSTLTDQEAA--RELEYLGRIKHPNLVPL 569
+L +G FG V + I AVKV+ S + RE+E L ++ HPN++ L
Sbjct: 29 MLGKGSFGEVLK--CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL 86
Query: 570 TGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGL 629
++ +E+ + ++ +L G + + +
Sbjct: 87 -------------FEILEDSSSFYIVGELYTGGELF---------------------DEI 112
Query: 630 LTTWRF-RHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLD---MNLEPRLSDFGLAK 685
+ RF H A + + + + I+HRD+K ++ L+ + + ++ DFGL+
Sbjct: 113 IKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLST 172
Query: 686 IFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
F + G+ YI PE + D K DV+ GV+L L++G P
Sbjct: 173 CFQQNTKMKDRIGTAYYIAPEVLRGTYD---EKCDVWSAGVILYILLSGTPPF 222
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 11/101 (10%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIA--RGSPGY 702
R L ++H S IIHRD+K S+V ++ + E R+ DFGLA+ DEE+ + Y
Sbjct: 134 RGLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLAR----QADEEMTGYVATRWY 186
Query: 703 IPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL-GDDY 742
PE + D++ G ++ EL+ GK G DY
Sbjct: 187 RAPEIMLNWMHY-NQTVDIWSVGCIMAELLQGKALFPGSDY 226
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 97/235 (41%), Gaps = 51/235 (21%)
Query: 515 LLAEGKFGPVY--RGFLPGGIHVAVKVLVHGSTL--TDQEAA-RELEYLGRIKHPNLVPL 569
+L +G FG V + + G AVKV+ TD+E+ RE++ L ++ HPN+ L
Sbjct: 33 VLGKGSFGEVILCKDKITGQ-ECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKL 91
Query: 570 TGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGL 629
Y++ E+ L+ ++ G + + +
Sbjct: 92 -------------YEFFEDKGYFYLVGEVYTGGELF---------------------DEI 117
Query: 630 LTTWRFRHKIALGTAR-ALAFLHHGCSPPIIHRDIKASSVYL-----DMNLEPRLSDFGL 683
++ RF A R L+ + + I+HRD+K ++ L D N+ R+ DFGL
Sbjct: 118 ISRKRFSEVDAARIIRQVLSGITYXHKNKIVHRDLKPENLLLESKSKDANI--RIIDFGL 175
Query: 684 AKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
+ F + G+ YI PE D K DV+ GV+L L++G P
Sbjct: 176 STHFEASKKXKDKIGTAYYIAPEVLHGTYD---EKCDVWSTGVILYILLSGCPPF 227
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 50/108 (46%), Gaps = 14/108 (12%)
Query: 643 TARALAFLHHGCSPPIIHRDIKASSVYLDM-----NLEPRLSDFGLAKIFGNGLDEEIAR 697
T LA LH S I+HRD+K ++ + M ++ +SDFGL K G R
Sbjct: 127 TTSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRR 183
Query: 698 ----GSPGYIPPEFAQPDS-DFPTPKSDVYCYGVVLLELIT-GKKPLG 739
G+ G+I PE D + PT D++ G V +I+ G P G
Sbjct: 184 SGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFG 231
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 6/98 (6%)
Query: 646 ALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGL-AKIFGN-GLDEEIARGSPGYI 703
A+A++H S HRD+K ++ D + +L DFGL AK GN + GS Y
Sbjct: 120 AVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYA 176
Query: 704 PPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDD 741
PE Q S + ++DV+ G++L L+ G P DD
Sbjct: 177 APELIQGKS-YLGSEADVWSMGILLYVLMCGFLPFDDD 213
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 658 IIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTP 717
I++RD+K ++ LD + R+SD GLA G + G+ GY+ PE + + +P
Sbjct: 307 IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSP 366
Query: 718 KSDVYCYGVVLLELITGKKPL 738
D + G +L E+I G+ P
Sbjct: 367 --DWWALGCLLYEMIAGQSPF 385
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Query: 646 ALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKI-FGNGLDEEIARGSPGYIP 704
AL +LH II+RD+K +V LD +L+D+G+ K G G+P YI
Sbjct: 165 ALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIA 221
Query: 705 PEFAQ-PDSDFPTPKSDVYCYGVVLLELITGKKPL 738
PE + D F D + GV++ E++ G+ P
Sbjct: 222 PEILRGEDYGFSV---DWWALGVLMFEMMAGRSPF 253
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 77/213 (36%), Gaps = 39/213 (18%)
Query: 535 VAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNL 594
VAVK + G + D+ RE+ ++HPN+V + + +Y G L
Sbjct: 46 VAVKYIERGEKI-DENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL--- 101
Query: 595 LHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGC 654
I N G F ++ G + A
Sbjct: 102 -----------------------FERICNAGRFSEDEARFFFQQLISGVSYCHAM----- 133
Query: 655 SPPIIHRDIKASSVYLDMNLEPRLS--DFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDS 712
+ HRD+K + LD + PRL DFG +K + G+P YI PE
Sbjct: 134 --QVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLL-KK 190
Query: 713 DFPTPKSDVYCYGVVLLELITGKKPLGDDYPEE 745
++ +DV+ GV L ++ G P D PEE
Sbjct: 191 EYDGKVADVWSCGVTLYVMLVGAYPFED--PEE 221
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 6/99 (6%)
Query: 646 ALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIAR---GSPGY 702
L +LH S I+H+DIK ++ L ++S G+A+ ++ R GSP +
Sbjct: 121 GLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAF 177
Query: 703 IPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDD 741
PPE A F K D++ GV L + TG P D
Sbjct: 178 QPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGD 216
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 97/241 (40%), Gaps = 65/241 (26%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRI--KHPNLVPLTGYC 573
+ +G++G V+RG G +VAVK+ S+ ++ RE E + +H N++
Sbjct: 45 VGKGRYGEVWRGSWQGE-NVAVKIF---SSRDEKSWFRETELYNTVMLRHENILGF---- 96
Query: 574 IAGD--------QRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVG 625
IA D Q I Y E G+L + L + +
Sbjct: 97 IASDMTSRHSSTQLWLITHYHEMGSLYDYLQ------------------------LTTLD 132
Query: 626 SEGLLTTWRFRHKIALGTARALAFLH------HGCSPPIIHRDIKASSVYLDMNLEPRLS 679
+ L +I L A LA LH G P I HRD+K+ ++ + N + ++
Sbjct: 133 TVSCL-------RIVLSIASGLAHLHIEIFGTQG-KPAIAHRDLKSKNILVKKNGQCCIA 184
Query: 680 DFGLAKIFG---NGLD--EEIARGSPGYIPPEF----AQPDSDFPTPKSDVYCYGVVLLE 730
D GLA + N LD G+ Y+ PE Q D + D++ +G+VL E
Sbjct: 185 DLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWE 244
Query: 731 L 731
+
Sbjct: 245 V 245
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 59/114 (51%), Gaps = 7/114 (6%)
Query: 638 KIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIAR 697
K+++ + L +L I+HRD+K S++ ++ E +L DFG++ + +
Sbjct: 108 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV- 164
Query: 698 GSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLV 751
G+ Y+ PE Q + +SD++ G+ L+E+ G+ P+ P+ KE L+
Sbjct: 165 GTRSYMSPERLQ--GTHYSVQSDIWSMGLSLVEMAVGRYPIPP--PDAKELELM 214
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 59/114 (51%), Gaps = 7/114 (6%)
Query: 638 KIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIAR 697
K+++ + L +L I+HRD+K S++ ++ E +L DFG++ + +
Sbjct: 108 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV- 164
Query: 698 GSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLV 751
G+ Y+ PE Q + +SD++ G+ L+E+ G+ P+ P+ KE L+
Sbjct: 165 GTRSYMSPERLQ--GTHYSVQSDIWSMGLSLVEMAVGRYPIPP--PDAKELELM 214
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 98/238 (41%), Gaps = 57/238 (23%)
Query: 515 LLAEGKFGPVY--RGFLPGGIHVAVKVLVHGSTL--TDQEAA-RELEYLGRIKHPNLVPL 569
+L +G FG V + + G AVKV+ TD+E+ RE++ L ++ HPN++ L
Sbjct: 57 VLGKGSFGEVILCKDKITGQ-ECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 115
Query: 570 TGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGL 629
Y++ E+ L+ ++ G + + +
Sbjct: 116 -------------YEFFEDKGYFYLVGEVYTGGELF---------------------DEI 141
Query: 630 LTTWRFRHKIALGTAR----ALAFLHHGCSPPIIHRDIKASSVYL-----DMNLEPRLSD 680
++ RF A R + ++H I+HRD+K ++ L D N+ R+ D
Sbjct: 142 ISRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANI--RIID 196
Query: 681 FGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
FGL+ F + G+ YI PE D K DV+ GV+L L++G P
Sbjct: 197 FGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYD---EKCDVWSTGVILYILLSGCPPF 251
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 59/114 (51%), Gaps = 7/114 (6%)
Query: 638 KIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIAR 697
K+++ + L +L I+HRD+K S++ ++ E +L DFG++ + +
Sbjct: 135 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV- 191
Query: 698 GSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLV 751
G+ Y+ PE Q + +SD++ G+ L+E+ G+ P+ P+ KE L+
Sbjct: 192 GTRSYMSPERLQ--GTHYSVQSDIWSMGLSLVEMAVGRYPIPP--PDAKELELM 241
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 98/238 (41%), Gaps = 57/238 (23%)
Query: 515 LLAEGKFGPVY--RGFLPGGIHVAVKVLVHGSTL--TDQEAA-RELEYLGRIKHPNLVPL 569
+L +G FG V + + G AVKV+ TD+E+ RE++ L ++ HPN++ L
Sbjct: 56 VLGKGSFGEVILCKDKITGQ-ECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 114
Query: 570 TGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGL 629
Y++ E+ L+ ++ G + + +
Sbjct: 115 -------------YEFFEDKGYFYLVGEVYTGGELF---------------------DEI 140
Query: 630 LTTWRFRHKIALGTAR----ALAFLHHGCSPPIIHRDIKASSVYL-----DMNLEPRLSD 680
++ RF A R + ++H I+HRD+K ++ L D N+ R+ D
Sbjct: 141 ISRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANI--RIID 195
Query: 681 FGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
FGL+ F + G+ YI PE D K DV+ GV+L L++G P
Sbjct: 196 FGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYD---EKCDVWSTGVILYILLSGCPPF 250
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 82/196 (41%), Gaps = 19/196 (9%)
Query: 628 GLLTTWRFRHKIALG--------TARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLS 679
G L + RH I L +A+LH + IHRD+ A +V LD + ++
Sbjct: 120 GSLRDYLPRHSIGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIG 176
Query: 680 DFGLAKIFGNGLDEEIAR---GSPGY-IPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
DFGLAK G + R SP + PE + + SDV+ +GV L EL+T
Sbjct: 177 DFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYA--SDVWSFGVTLYELLTHC 234
Query: 736 KPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLP 795
P K L+ +G + + + ++ R P+K E + C
Sbjct: 235 D--SSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEA 292
Query: 796 LKRPSMQQIVGLLKDI 811
RP+ + ++ +LK +
Sbjct: 293 SFRPTFENLIPILKTV 308
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 658 IIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTP 717
I++RD+K ++ LD + R+SD GLA G + G+ GY+ PE + + +P
Sbjct: 307 IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSP 366
Query: 718 KSDVYCYGVVLLELITGKKPL 738
D + G +L E+I G+ P
Sbjct: 367 --DWWALGCLLYEMIAGQSPF 385
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 98/240 (40%), Gaps = 63/240 (26%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRI--KHPNLVPLTGYC 573
+ +G++G V+RG G +VAVK+ S+ ++ RE E + +H N++ G+
Sbjct: 16 VGKGRYGEVWRGSWQGE-NVAVKIF---SSRDEKSWFRETELYNTVMLRHENIL---GF- 67
Query: 574 IAGD--------QRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVG 625
IA D Q I Y E G+L + L + +
Sbjct: 68 IASDMTSRHSSTQLWLITHYHEMGSLYDYLQ------------------------LTTLD 103
Query: 626 SEGLLTTWRFRHKIALGTARALAFLHHGC-----SPPIIHRDIKASSVYLDMNLEPRLSD 680
+ L +I L A LA LH P I HRD+K+ ++ + N + ++D
Sbjct: 104 TVSCL-------RIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIAD 156
Query: 681 FGLAKIFG---NGLD--EEIARGSPGYIPPEF----AQPDSDFPTPKSDVYCYGVVLLEL 731
GLA + N LD G+ Y+ PE Q D + D++ +G+VL E+
Sbjct: 157 LGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Query: 646 ALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKI-FGNGLDEEIARGSPGYIP 704
AL +LH II+RD+K +V LD +L+D+G+ K G G+P YI
Sbjct: 133 ALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIA 189
Query: 705 PEFAQ-PDSDFPTPKSDVYCYGVVLLELITGKKPL 738
PE + D F D + GV++ E++ G+ P
Sbjct: 190 PEILRGEDYGFSV---DWWALGVLMFEMMAGRSPF 221
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 98/240 (40%), Gaps = 63/240 (26%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRI--KHPNLVPLTGYC 573
+ +G++G V+RG G +VAVK+ S+ ++ RE E + +H N++ G+
Sbjct: 16 VGKGRYGEVWRGSWQGE-NVAVKIF---SSRDEKSWFRETELYNTVMLRHENIL---GF- 67
Query: 574 IAGD--------QRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVG 625
IA D Q I Y E G+L + L + +
Sbjct: 68 IASDMTSRHSSTQLWLITHYHEMGSLYDYLQ------------------------LTTLD 103
Query: 626 SEGLLTTWRFRHKIALGTARALAFLHHGC-----SPPIIHRDIKASSVYLDMNLEPRLSD 680
+ L +I L A LA LH P I HRD+K+ ++ + N + ++D
Sbjct: 104 TVSCL-------RIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIAD 156
Query: 681 FGLAKIFG---NGLD--EEIARGSPGYIPPEF----AQPDSDFPTPKSDVYCYGVVLLEL 731
GLA + N LD G+ Y+ PE Q D + D++ +G+VL E+
Sbjct: 157 LGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 99/246 (40%), Gaps = 47/246 (19%)
Query: 506 ATSNFDRGTLLAEGKFGPVYRGFLPGGIH-VAVK-VLVHGSTLTDQ----EAARELEYLG 559
ATS ++ + G +G VY+ P H VA+K V V RE+ L
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 560 RIK---HPNLVPLTGYCIAG--DQRIAIYDYME--NGNLQNLLHDLPLGVQXXXXXXXXX 612
R++ HPN+V L C D+ I + E + +L+ L P
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAP------------- 113
Query: 613 XXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDM 672
+I+++ + L R L FLH C I+HRD+K ++ +
Sbjct: 114 PPGLPAETIKDLMRQFL---------------RGLDFLHANC---IVHRDLKPENILVTS 155
Query: 673 NLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELI 732
+L+DFGLA+I+ + + Y PE S + TP D++ G + E+
Sbjct: 156 GGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLL-QSTYATP-VDMWSVGCIFAEMF 213
Query: 733 TGKKPL 738
+KPL
Sbjct: 214 R-RKPL 218
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 59/114 (51%), Gaps = 7/114 (6%)
Query: 638 KIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIAR 697
K+++ + L +L I+HRD+K S++ ++ E +L DFG++ + +
Sbjct: 108 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV- 164
Query: 698 GSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLV 751
G+ Y+ PE Q + +SD++ G+ L+E+ G+ P+ P+ KE L+
Sbjct: 165 GTRSYMSPERLQ--GTHYSVQSDIWSMGLSLVEMAVGRYPIPP--PDAKELELM 214
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 115/305 (37%), Gaps = 61/305 (20%)
Query: 516 LAEGKFGPVYRGFL------PGGIHVAVKVLVHGSTLTDQ-EAARELEYLGRIKHPNLVP 568
L G FG VY G + P + VAVK L + D+ + E + + H N+V
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 569 LTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEG 628
G + R + + M G+L++ L + S
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRE-------------------TRPRPSQPSSLA 179
Query: 629 LLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLS---DFGLAK 685
+L IA G + L H IHRDI A + L R++ DFG+A+
Sbjct: 180 MLDLLHVARDIACG-CQYLEENH------FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 232
Query: 686 -IFGNGLDEEIARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT-GKKPLGD 740
I+ G +G +P ++ P++ T K+D + +GV+L E+ + G P
Sbjct: 233 DIYRAGY---YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--- 286
Query: 741 DYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPS 800
YP + ++ +V G R +DP GP +I C P RP+
Sbjct: 287 -YPSKSNQEVLEFV------TSGGR-MDPPKNCPGP------VYRIMTQCWQHQPEDRPN 332
Query: 801 MQQIV 805
I+
Sbjct: 333 FAIIL 337
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 59/114 (51%), Gaps = 7/114 (6%)
Query: 638 KIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIAR 697
K+++ + L +L I+HRD+K S++ ++ E +L DFG++ + +
Sbjct: 108 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV- 164
Query: 698 GSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLV 751
G+ Y+ PE Q + +SD++ G+ L+E+ G+ P+ P+ KE L+
Sbjct: 165 GTRSYMSPERLQ--GTHYSVQSDIWSMGLSLVEMAVGRYPIPP--PDAKELELM 214
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 11/101 (10%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIA--RGSPGY 702
R L ++H S IIHRD+K S+V ++ + E R+ DFGLA+ DEE+ + Y
Sbjct: 142 RGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLAR----QADEEMTGYVATRWY 194
Query: 703 IPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL-GDDY 742
PE + D++ G ++ EL+ GK G DY
Sbjct: 195 RAPEIMLNWMHY-NQTVDIWSVGCIMAELLQGKALFPGSDY 234
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 11/101 (10%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIA--RGSPGY 702
R L ++H S IIHRD+K S+V ++ + E R+ DFGLA+ DEE+ + Y
Sbjct: 142 RGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLAR----QADEEMTGYVATRWY 194
Query: 703 IPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL-GDDY 742
PE + D++ G ++ EL+ GK G DY
Sbjct: 195 RAPEIMLNWMHY-NQTVDIWSVGCIMAELLQGKALFPGSDY 234
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 115/305 (37%), Gaps = 61/305 (20%)
Query: 516 LAEGKFGPVYRGFL------PGGIHVAVKVLVHGSTLTDQ-EAARELEYLGRIKHPNLVP 568
L G FG VY G + P + VAVK L + D+ + E + + H N+V
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 569 LTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEG 628
G + R + + M G+L++ L + S
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRE-------------------TRPRPSQPSSLA 156
Query: 629 LLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLS---DFGLAK 685
+L IA G + L H IHRDI A + L R++ DFG+A+
Sbjct: 157 MLDLLHVARDIACG-CQYLEENH------FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 209
Query: 686 -IFGNGLDEEIARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT-GKKPLGD 740
I+ G +G +P ++ P++ T K+D + +GV+L E+ + G P
Sbjct: 210 DIYRAGY---YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--- 263
Query: 741 DYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPS 800
YP + ++ +V G R +DP GP +I C P RP+
Sbjct: 264 -YPSKSNQEVLEFV------TSGGR-MDPPKNCPGP------VYRIMTQCWQHQPEDRPN 309
Query: 801 MQQIV 805
I+
Sbjct: 310 FAIIL 314
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 98/238 (41%), Gaps = 57/238 (23%)
Query: 515 LLAEGKFGPVY--RGFLPGGIHVAVKVLVHGSTL--TDQEAA-RELEYLGRIKHPNLVPL 569
+L +G FG V + + G AVKV+ TD+E+ RE++ L ++ HPN++ L
Sbjct: 39 VLGKGSFGEVILCKDKITGQ-ECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 97
Query: 570 TGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGL 629
Y++ E+ L+ ++ G + + +
Sbjct: 98 -------------YEFFEDKGYFYLVGEVYTGGELF---------------------DEI 123
Query: 630 LTTWRFRHKIALGTAR----ALAFLHHGCSPPIIHRDIKASSVYL-----DMNLEPRLSD 680
++ RF A R + ++H I+HRD+K ++ L D N+ R+ D
Sbjct: 124 ISRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANI--RIID 178
Query: 681 FGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
FGL+ F + G+ YI PE D K DV+ GV+L L++G P
Sbjct: 179 FGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYD---EKCDVWSTGVILYILLSGCPPF 233
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 124/306 (40%), Gaps = 50/306 (16%)
Query: 516 LAEGKFGPV-YRGFLPG----GIHVAVKVLVHGSTLTDQEA-ARELEYLGRIKHPNLVPL 569
L EG FG V + P G VAVK L G + RE+E L + H ++V
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 570 TGYCI-AGDQRIA-IYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSE 627
G C G++ + + +Y+ G+L++ L VG
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYL------------------------PRHCVGLA 112
Query: 628 GLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIF 687
LL F +I G +A+LH + IHR + A +V LD + ++ DFGLAK
Sbjct: 113 QLLL---FAQQICEG----MAYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAV 162
Query: 688 GNGLDEEIAR---GSPGY-IPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYP 743
G + R SP + PE + + SDV+ +GV L EL+T + P
Sbjct: 163 PEGHEYYRVREDGDSPVFWYAPECLKECKFYYA--SDVWSFGVTLYELLTYCD--SNQSP 218
Query: 744 EEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQ 803
K L+ +G + + + ++ R P++ E + C RP+ Q
Sbjct: 219 HTKFTELIGHTQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQN 278
Query: 804 IVGLLK 809
+V +L+
Sbjct: 279 LVPILQ 284
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Query: 646 ALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKI-FGNGLDEEIARGSPGYIP 704
AL +LH II+RD+K +V LD +L+D+G+ K G G+P YI
Sbjct: 118 ALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIA 174
Query: 705 PEFAQ-PDSDFPTPKSDVYCYGVVLLELITGKKPL 738
PE + D F D + GV++ E++ G+ P
Sbjct: 175 PEILRGEDYGFSV---DWWALGVLMFEMMAGRSPF 206
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 59/114 (51%), Gaps = 7/114 (6%)
Query: 638 KIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIAR 697
K+++ + L +L I+HRD+K S++ ++ E +L DFG++ + +
Sbjct: 170 KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV- 226
Query: 698 GSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLV 751
G+ Y+ PE Q + +SD++ G+ L+E+ G+ P+ P+ KE L+
Sbjct: 227 GTRSYMSPERLQ--GTHYSVQSDIWSMGLSLVEMAVGRYPIPP--PDAKELELM 276
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 57/110 (51%), Gaps = 7/110 (6%)
Query: 638 KIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIAR 697
K+++ + L +L I+HRD+K S++ ++ E +L DFG++ + +
Sbjct: 108 KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV- 164
Query: 698 GSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKE 747
G+ Y+ PE Q + +SD++ G+ L+E+ G+ P+ P+ KE
Sbjct: 165 GTRSYMSPERLQ--GTHYSVQSDIWSMGLSLVEMAVGRYPIPP--PDAKE 210
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 124/306 (40%), Gaps = 50/306 (16%)
Query: 516 LAEGKFGPV-YRGFLPG----GIHVAVKVLVHGSTLTDQEA-ARELEYLGRIKHPNLVPL 569
L EG FG V + P G VAVK L G + RE+E L + H ++V
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 570 TGYCI-AGDQRIA-IYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSE 627
G C G++ + + +Y+ G+L++ L VG
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYL------------------------PRHCVGLA 111
Query: 628 GLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIF 687
LL F +I G +A+LH + IHR + A +V LD + ++ DFGLAK
Sbjct: 112 QLLL---FAQQICEG----MAYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAV 161
Query: 688 GNGLDEEIAR---GSPGY-IPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYP 743
G + R SP + PE + + SDV+ +GV L EL+T + P
Sbjct: 162 PEGHEYYRVREDGDSPVFWYAPECLKECKFYYA--SDVWSFGVTLYELLTYCD--SNQSP 217
Query: 744 EEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQ 803
K L+ +G + + + ++ R P++ E + C RP+ Q
Sbjct: 218 HTKFTELIGHTQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQN 277
Query: 804 IVGLLK 809
+V +L+
Sbjct: 278 LVPILQ 283
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 658 IIHRDIKASSVYLDMNLE---PRLSDFGLA-KIFGNGLDEEIARGSPGYIPPEFAQPDSD 713
++HRD+K ++ L L+ +L+DFGLA ++ G G+PGY+ PE + D
Sbjct: 142 VVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDP- 200
Query: 714 FPTPKSDVYCYGVVLLELITGKKPLGDD 741
+ P D++ GV+L L+ G P D+
Sbjct: 201 YGKP-VDLWACGVILYILLVGYPPFWDE 227
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Query: 646 ALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKI-FGNGLDEEIARGSPGYIP 704
AL +LH II+RD+K +V LD +L+D+G+ K G G+P YI
Sbjct: 122 ALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIA 178
Query: 705 PEFAQ-PDSDFPTPKSDVYCYGVVLLELITGKKPL 738
PE + D F D + GV++ E++ G+ P
Sbjct: 179 PEILRGEDYGFSV---DWWALGVLMFEMMAGRSPF 210
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 658 IIHRDIKASSVYLDMNLE---PRLSDFGLA-KIFGNGLDEEIARGSPGYIPPEFAQPDSD 713
I+HRD+K ++ L + +L+DFGLA ++ G G+PGY+ PE + D
Sbjct: 151 IVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDP- 209
Query: 714 FPTPKSDVYCYGVVLLELITGKKPLGDD 741
+ P D++ GV+L L+ G P D+
Sbjct: 210 YGKP-VDIWACGVILYILLVGYPPFWDE 236
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 650 LHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQ 709
L H + +++RD+K +++ LD + R+SD GLA F + G+ GY+ PE Q
Sbjct: 305 LEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK-KPHASVGTHGYMAPEVLQ 363
Query: 710 PDSDFPTPKSDVYCYGVVLLELITGKKPL 738
+ + +D + G +L +L+ G P
Sbjct: 364 KGVAYDS-SADWFSLGCMLFKLLRGHSPF 391
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 650 LHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQ 709
L H + +++RD+K +++ LD + R+SD GLA F + G+ GY+ PE Q
Sbjct: 305 LEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK-KPHASVGTHGYMAPEVLQ 363
Query: 710 PDSDFPTPKSDVYCYGVVLLELITGKKPL 738
+ + +D + G +L +L+ G P
Sbjct: 364 KGVAYDS-SADWFSLGCMLFKLLRGHSPF 391
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 650 LHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQ 709
L H + +++RD+K +++ LD + R+SD GLA F + G+ GY+ PE Q
Sbjct: 304 LEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK-KPHASVGTHGYMAPEVLQ 362
Query: 710 PDSDFPTPKSDVYCYGVVLLELITGKKPL 738
+ + +D + G +L +L+ G P
Sbjct: 363 KGVAYDS-SADWFSLGCMLFKLLRGHSPF 390
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 650 LHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQ 709
L H + +++RD+K +++ LD + R+SD GLA F + G+ GY+ PE Q
Sbjct: 305 LEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK-KPHASVGTHGYMAPEVLQ 363
Query: 710 PDSDFPTPKSDVYCYGVVLLELITGKKPL 738
+ + +D + G +L +L+ G P
Sbjct: 364 KGVAYDS-SADWFSLGCMLFKLLRGHSPF 391
>pdb|1M0Z|A Chain A, Crystal Structure Of The Von Willebrand Factor Binding
Domain Of Glycoprotein Ib Alpha
pdb|1M0Z|B Chain B, Crystal Structure Of The Von Willebrand Factor Binding
Domain Of Glycoprotein Ib Alpha
Length = 290
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 61/121 (50%), Gaps = 5/121 (4%)
Query: 50 GKLSKLQSLDLSENNITALPSDLWSLGSLKSLNLSYNRISGSLP-SNIGNFGLLEVFDLS 108
G L L +LDLS N + +LP +L +L L++S+NR++ SLP + G L+ L
Sbjct: 74 GTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLT-SLPLGALRGLGELQELYLK 132
Query: 109 NNNFSGEIPAAISSLVSLRVLKLDGNMFQWSIPPGLLN-CQSLVTVDLSMNQLNGSLPDG 167
N P ++ L L L N +P GLLN ++L T+ L N L ++P G
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNQLT-ELPAGLLNGLENLDTLLLQENSLY-TIPKG 190
Query: 168 F 168
F
Sbjct: 191 F 191
Score = 37.4 bits (85), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 62/138 (44%), Gaps = 27/138 (19%)
Query: 48 TIGKLSKLQSLDLSENNITALPSDLWSLGSLKSLNLSYNRISGSLPSNIGNFGLLEVFDL 107
T+ ++L L+L +T L D +L L +L+LS+N++ SLP L V D+
Sbjct: 50 TLMPYTRLTQLNLDRCELTKLQVD-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDV 107
Query: 108 SNNNFSGEIPAAISSLVSLRVLKLDGNMFQWSIPPGLLNCQSLVTVDLSMNQLNGSLPDG 167
S N + A+ L L+ L L GN + ++PPGLL
Sbjct: 108 SFNRLTSLPLGALRGLGELQELYLKGNELK-TLPPGLL---------------------- 144
Query: 168 FGAAFPKLKSLNLAGNEI 185
PKL+ L+LA N++
Sbjct: 145 --TPTPKLEKLSLANNQL 160
Score = 30.0 bits (66), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 85/195 (43%), Gaps = 21/195 (10%)
Query: 45 PDTTIGKLSKLQSLDLSENNITALPSDLWSLGSLKSL--NLSYN-RISGSLPSNIGNFGL 101
P + K++ ++ + +TALP DL ++ L NL Y ++ +P
Sbjct: 2 PICEVSKVASHLEVNCDKRQLTALPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQLN 61
Query: 102 LEVFDLSNNNFSGEIPAAISSLVSLRVLKLDGNMFQWSIPPGLLNCQSLVTVDLSMNQLN 161
L+ +L+ G +P L L L N Q S+P +L +D+S N+L
Sbjct: 62 LDRCELTKLQVDGTLPV-------LGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLT 113
Query: 162 GSLPDGFGAAFPKLKSLNLAGNEIKGRDTHFAGLKSIT----NLNISGNLFQGSVMGVF- 216
SLP G +L+ L L GNE+K T GL + T L+++ N G+
Sbjct: 114 -SLPLGALRGLGELQELYLKGNELK---TLPPGLLTPTPKLEKLSLANNQLTELPAGLLN 169
Query: 217 -LESLEVIDLRSNQF 230
LE+L+ + L+ N
Sbjct: 170 GLENLDTLLLQENSL 184
Score = 30.0 bits (66), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 286 EFPQIGTLLGLEHLNLSRTSLIGDIPSEILQLSSLHTLDLSMNHLTGQIPTVSAKNLGII 345
+ P+ T+L L L SL +P L +L +L+ + G +P LG +
Sbjct: 28 DLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRCELTKLQVDGTLPV-----LGTL 82
Query: 346 DMSHNNLSGEIPASLLEKLPQMERFNFSYNNLT 378
D+SHN L +P L + LP + + S+N LT
Sbjct: 83 DLSHNQLQS-LPL-LGQTLPALTVLDVSFNRLT 113
>pdb|1M10|B Chain B, Crystal Structure Of The Complex Of Glycoprotein Ib Alpha
And The Von Willebrand Factor A1 Domain
Length = 290
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 61/121 (50%), Gaps = 5/121 (4%)
Query: 50 GKLSKLQSLDLSENNITALPSDLWSLGSLKSLNLSYNRISGSLP-SNIGNFGLLEVFDLS 108
G L L +LDLS N + +LP +L +L L++S+NR++ SLP + G L+ L
Sbjct: 74 GTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLT-SLPLGALRGLGELQELYLK 132
Query: 109 NNNFSGEIPAAISSLVSLRVLKLDGNMFQWSIPPGLLN-CQSLVTVDLSMNQLNGSLPDG 167
N P ++ L L L N +P GLLN ++L T+ L N L ++P G
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNQLT-ELPAGLLNGLENLDTLLLQENSLY-TIPKG 190
Query: 168 F 168
F
Sbjct: 191 F 191
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 62/138 (44%), Gaps = 27/138 (19%)
Query: 48 TIGKLSKLQSLDLSENNITALPSDLWSLGSLKSLNLSYNRISGSLPSNIGNFGLLEVFDL 107
T+ ++L L+L +T L D +L L +L+LS+N++ SLP L V D+
Sbjct: 50 TLMPYTRLTQLNLDRCELTKLQVD-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDV 107
Query: 108 SNNNFSGEIPAAISSLVSLRVLKLDGNMFQWSIPPGLLNCQSLVTVDLSMNQLNGSLPDG 167
S N + A+ L L+ L L GN + ++PPGLL
Sbjct: 108 SFNRLTSLPLGALRGLGELQELYLKGNELK-TLPPGLL---------------------- 144
Query: 168 FGAAFPKLKSLNLAGNEI 185
PKL+ L+LA N++
Sbjct: 145 --TPTPKLEKLSLANNQL 160
Score = 30.0 bits (66), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 85/195 (43%), Gaps = 21/195 (10%)
Query: 45 PDTTIGKLSKLQSLDLSENNITALPSDLWSLGSLKSL--NLSYN-RISGSLPSNIGNFGL 101
P + K++ ++ + +TALP DL ++ L NL Y ++ +P
Sbjct: 2 PICEVSKVASHLEVNCDKRQLTALPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQLN 61
Query: 102 LEVFDLSNNNFSGEIPAAISSLVSLRVLKLDGNMFQWSIPPGLLNCQSLVTVDLSMNQLN 161
L+ +L+ G +P L L L N Q S+P +L +D+S N+L
Sbjct: 62 LDRCELTKLQVDGTLPV-------LGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLT 113
Query: 162 GSLPDGFGAAFPKLKSLNLAGNEIKGRDTHFAGLKSIT----NLNISGNLFQGSVMGVF- 216
SLP G +L+ L L GNE+K T GL + T L+++ N G+
Sbjct: 114 -SLPLGALRGLGELQELYLKGNELK---TLPPGLLTPTPKLEKLSLANNQLTELPAGLLN 169
Query: 217 -LESLEVIDLRSNQF 230
LE+L+ + L+ N
Sbjct: 170 GLENLDTLLLQENSL 184
Score = 29.6 bits (65), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 286 EFPQIGTLLGLEHLNLSRTSLIGDIPSEILQLSSLHTLDLSMNHLTGQIPTVSAKNLGII 345
+ P+ T+L L L SL +P L +L +L+ + G +P LG +
Sbjct: 28 DLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRCELTKLQVDGTLPV-----LGTL 82
Query: 346 DMSHNNLSGEIPASLLEKLPQMERFNFSYNNLT 378
D+SHN L +P L + LP + + S+N LT
Sbjct: 83 DLSHNQLQS-LPL-LGQTLPALTVLDVSFNRLT 113
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 95/224 (42%), Gaps = 33/224 (14%)
Query: 515 LLAEGKFGPVYRGFL-PGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYC 573
++ G FG VY+ L G VA+K ++ G + REL+ + ++ H N+V L +
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN----RELQIMRKLDHCNIVRLRYFF 82
Query: 574 IA-GDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTT 632
+ G+++ +Y L +L +P V ++ L
Sbjct: 83 YSSGEKKDEVY-------LNLVLDYVPATVYRVARHYSRAKQTLPVIYVK-------LYM 128
Query: 633 WRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEP-RLSDFGLAKIFGNGL 691
++ R+LA++H S I HRDIK ++ LD + +L DFG AK G
Sbjct: 129 YQL--------FRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 177
Query: 692 DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
S Y PE +D+ T DV+ G VL EL+ G+
Sbjct: 178 PNVSXICSRYYRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQ 220
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 10/93 (10%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIA--RGSPGY 702
R L ++H S IIHRD+K S++ ++ + E ++ DFGLA+ D+E+A + Y
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMAGFVATRWY 188
Query: 703 IPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE + D++ G ++ EL+TG+
Sbjct: 189 RAPEIMLNWMHY-NQTVDIWSVGCIMAELLTGR 220
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 99/247 (40%), Gaps = 45/247 (18%)
Query: 503 LLSATSNFDRGTLLAEGKFGPVY--RGFLPGGIHVAVKVLV-----HGSTLTDQEAAREL 555
L A ++ + EG +G V+ R GG VA+K + G L+ L
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 556 EYLGRIKHPNLVPLTGYCIAG----DQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXX 611
+L +HPN+V L C + ++ + + +L L +P
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVP------------ 113
Query: 612 XXXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLD 671
+I+++ + L R L FLH S ++HRD+K ++ +
Sbjct: 114 -EPGVPTETIKDMMFQLL---------------RGLDFLH---SHRVVHRDLKPQNILVT 154
Query: 672 MNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLEL 731
+ + +L+DFGLA+I+ + + Y PE S + TP D++ G + E+
Sbjct: 155 SSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLL-QSSYATP-VDLWSVGCIFAEM 212
Query: 732 ITGKKPL 738
+KPL
Sbjct: 213 FR-RKPL 218
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 99/247 (40%), Gaps = 45/247 (18%)
Query: 503 LLSATSNFDRGTLLAEGKFGPVY--RGFLPGGIHVAVKVLV-----HGSTLTDQEAAREL 555
L A ++ + EG +G V+ R GG VA+K + G L+ L
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 556 EYLGRIKHPNLVPLTGYCIAG----DQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXX 611
+L +HPN+V L C + ++ + + +L L +P
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVP------------ 113
Query: 612 XXXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLD 671
+I+++ + L R L FLH S ++HRD+K ++ +
Sbjct: 114 -EPGVPTETIKDMMFQLL---------------RGLDFLH---SHRVVHRDLKPQNILVT 154
Query: 672 MNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLEL 731
+ + +L+DFGLA+I+ + + Y PE S + TP D++ G + E+
Sbjct: 155 SSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLL-QSSYATP-VDLWSVGCIFAEM 212
Query: 732 ITGKKPL 738
+KPL
Sbjct: 213 FR-RKPL 218
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 10/93 (10%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIA--RGSPGY 702
R L ++H S IIHRD+K S++ ++ + E ++ DFGLA+ D+E+A + Y
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMAGFVATRWY 188
Query: 703 IPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE + D++ G ++ EL+TG+
Sbjct: 189 RAPEIMLNWMHY-NQTVDIWSVGCIMAELLTGR 220
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Query: 658 IIHRDIKASSVYLDMNLE---PRLSDFGLA-KIFGNGLDEEIARGSPGYIPPEFAQPDSD 713
++HRD+K ++ L + +L+DFGLA ++ G+ G+PGY+ PE + ++
Sbjct: 124 VVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEA- 182
Query: 714 FPTPKSDVYCYGVVLLELITGKKPLGDD 741
+ P D++ GV+L L+ G P D+
Sbjct: 183 YGKP-VDIWACGVILYILLVGYPPFWDE 209
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 99/247 (40%), Gaps = 45/247 (18%)
Query: 503 LLSATSNFDRGTLLAEGKFGPVY--RGFLPGGIHVAVKVLV-----HGSTLTDQEAAREL 555
L A ++ + EG +G V+ R GG VA+K + G L+ L
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 556 EYLGRIKHPNLVPLTGYCIAG----DQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXX 611
+L +HPN+V L C + ++ + + +L L +P
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVP------------ 113
Query: 612 XXXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLD 671
+I+++ + L R L FLH S ++HRD+K ++ +
Sbjct: 114 -EPGVPTETIKDMMFQLL---------------RGLDFLH---SHRVVHRDLKPQNILVT 154
Query: 672 MNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLEL 731
+ + +L+DFGLA+I+ + + Y PE S + TP D++ G + E+
Sbjct: 155 SSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLL-QSSYATP-VDLWSVGCIFAEM 212
Query: 732 ITGKKPL 738
+KPL
Sbjct: 213 FR-RKPL 218
>pdb|3J0A|A Chain A, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
pdb|3J0A|B Chain B, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
Length = 844
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 105/232 (45%), Gaps = 43/232 (18%)
Query: 44 VPDTTIGKLSKLQSLDLSENNITA---LPS--DLW----SLGSLKSLNLSYNRISGSLPS 94
+ D T L KLQ+LDL +N +T +PS D++ L +L +NL+ N I S +
Sbjct: 353 IQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLS-EN 411
Query: 95 NIGNFGL---------LEVFDLSNNNFSG----EIPAAISSLVSLRVLKLDGNMFQ---- 137
+ N + L++ L+ N FS + P S SL L L NM Q
Sbjct: 412 RLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTP---SENPSLEQLFLGENMLQLAWE 468
Query: 138 ----WSIPPGLLNCQSLVTVDLSMNQLNGSLPDGFGAAFPKLKSLNLAGNEIKGRDTHFA 193
W + GL + Q L L+ N LN SLP G + L+ L+L N + +H
Sbjct: 469 TELCWDVFEGLSHLQVLY---LNHNYLN-SLPPGVFSHLTALRGLSLNSNRLTVL-SHND 523
Query: 194 GLKSITNLNISGNLFQGSVMGVFLESLEVIDLRSNQFQGHISQVQFNSSYNW 245
++ L+IS N VF+ SL V+D+ N+F I + + ++ NW
Sbjct: 524 LPANLEILDISRNQLLAPNPDVFV-SLSVLDITHNKF---ICECELSTFINW 571
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 134/320 (41%), Gaps = 57/320 (17%)
Query: 48 TIGKLSKLQSLDLSENNI--------TALPSDLWSLGSLKSLNLSYNRISGSLPSNIGNF 99
+ GKL+ L+S+D S N I L S SL + N Y+R+S + F
Sbjct: 143 SFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAA-NSLYSRVSVDWGKCMNPF 201
Query: 100 G--LLEVFDLSNNNFSGEIPAAISSLVSL--------------------RVLKLDGNMFQ 137
+LE+ D+S N ++ +I S+ +S + D N F
Sbjct: 202 RNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTF- 260
Query: 138 WSIPPGLLNCQSLVTVDLSMNQLNGSLPDGFGAAFPKLKSLNLAGNEI-KGRDTHFAGLK 196
GL S+ +DLS + SL LK LNLA N+I K D F GL
Sbjct: 261 ----AGLAR-SSVRHLDLS-HGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLD 314
Query: 197 SITNLNIS----GNLFQGSVMGVFLESLEVIDLRSNQFQGHISQVQFNSSYNWSRLVYVD 252
++ LN+S G L+ + G L + IDL+ N HI+ +Q + +L +D
Sbjct: 315 NLQVLNLSYNLLGELYSSNFYG--LPKVAYIDLQKN----HIAIIQDQTFKFLEKLQTLD 368
Query: 253 LSENQLSGEIFHNFSQAQNLKHLSLAYNRFTRQEFPQIGTLLGLEHLNLSRTSLIGDIPS 312
L +N L+ F ++ + L+ N+ P+I L HL+ +R + DI
Sbjct: 369 LRDNALTTIHF-----IPSIPDIFLSGNKLV--TLPKINLTANLIHLSENRLENL-DILY 420
Query: 313 EILQLSSLHTLDLSMNHLTG 332
+L++ L L L+ N +
Sbjct: 421 FLLRVPHLQILILNQNRFSS 440
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIP 704
R L ++H S IIHRD+K S++ ++ + E ++ DFGLA+ + + +A + Y
Sbjct: 143 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVA--TRWYRA 197
Query: 705 PEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE + D++ G ++ EL+TG+
Sbjct: 198 PEIMLNWMHY-NQTVDIWSVGCIMAELLTGR 227
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIP 704
R L ++H S IIHRD+K S++ ++ + E ++ DFGLA+ + + +A + Y
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA--TRWYRA 190
Query: 705 PEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE + D++ G ++ EL+TG+
Sbjct: 191 PEIMLNAMHY-NQTVDIWSVGCIMAELLTGR 220
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIP 704
R L ++H S IIHRD+K S++ ++ + E ++ DFGLA+ + + +A + Y
Sbjct: 143 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVA--TRWYRA 197
Query: 705 PEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE + D++ G ++ EL+TG+
Sbjct: 198 PEIMLNWMHY-NQTVDIWSVGCIMAELLTGR 227
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 87/239 (36%), Gaps = 47/239 (19%)
Query: 516 LAEGKFGPV--YRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYC 573
L EG F V G G + ++L H +EA RE + HPN++ L YC
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKRILCHEQQ-DREEAQREADMHRLFNHPNILRLVAYC 95
Query: 574 I----AGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGL 629
+ A + + + + G L N I+ + +G
Sbjct: 96 LRERGAKHEAWLLLPFFKRGTL--------------------------WNEIERLKDKGN 129
Query: 630 LTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFG---LAKI 686
T + LG R L +H + HRD+K +++ L +P L D G A I
Sbjct: 130 FLTEDQILWLLLGICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACI 186
Query: 687 FGNG-------LDEEIARGSPGYIPPE-FAQPDSDFPTPKSDVYCYGVVLLELITGKKP 737
G D R + Y PE F+ ++DV+ G VL ++ G+ P
Sbjct: 187 HVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGP 245
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 102/263 (38%), Gaps = 60/263 (22%)
Query: 554 ELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXX 613
E+E L ++ HP ++ + + A D I + + ME G L +
Sbjct: 204 EIEILKKLNHPCIIKIKNFFDAEDYYIVL-ELMEGGELFD-------------------- 242
Query: 614 XXXXXNSIQNVGSEGL--LTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLD 671
+ VG++ L T + +++ L A+ +LH IIHRD+K +V L
Sbjct: 243 --------KVVGNKRLKEATCKLYFYQMLL----AVQYLHEN---GIIHRDLKPENVLLS 287
Query: 672 MNLEP---RLSDFGLAKIFGNGLDEEIARGSPGYIPPE-FAQPDSDFPTPKSDVYCYGVV 727
E +++DFG +KI G G+P Y+ PE + D + GV+
Sbjct: 288 SQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI 347
Query: 728 LLELITGKKPLGD--------DYPEEKEGNLVSWVRGLVRNN-----KGSRAIDPKIRDT 774
L ++G P + D + N + V V K +DPK R T
Sbjct: 348 LFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFT 407
Query: 775 GPEKQMEEALKIGYLCTADLPLK 797
EEAL+ +L D+ K
Sbjct: 408 -----TEEALRHPWLQDEDMKRK 425
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 10/93 (10%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIA--RGSPGY 702
R L ++H S IIHRD+K S++ ++ + E ++ DFGLA+ D+E+A + Y
Sbjct: 132 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMAGFVATRWY 184
Query: 703 IPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE + D++ G ++ EL+TG+
Sbjct: 185 RAPEIMLNWMHY-NQTVDIWSVGCIMAELLTGR 216
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIP 704
R L ++H S IIHRD+K S++ ++ + E ++ DFGLA+ + + +A + Y
Sbjct: 143 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVA--TRWYRA 197
Query: 705 PEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE + D++ G ++ EL+TG+
Sbjct: 198 PEIMLNWMHY-NQTVDIWSVGCIMAELLTGR 227
>pdb|1U0N|D Chain D, The Ternary Von Willebrand Factor A1-Glycoprotein Ibalpha-
Botrocetin Complex
Length = 265
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 61/121 (50%), Gaps = 5/121 (4%)
Query: 50 GKLSKLQSLDLSENNITALPSDLWSLGSLKSLNLSYNRISGSLP-SNIGNFGLLEVFDLS 108
G L L +LDLS N + +LP +L +L L++S+NR++ SLP + G L+ L
Sbjct: 74 GTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLT-SLPLGALRGLGELQELYLK 132
Query: 109 NNNFSGEIPAAISSLVSLRVLKLDGNMFQWSIPPGLLN-CQSLVTVDLSMNQLNGSLPDG 167
N P ++ L L L N +P GLLN ++L T+ L N L ++P G
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNQLT-ELPAGLLNGLENLDTLLLQENSLY-TIPKG 190
Query: 168 F 168
F
Sbjct: 191 F 191
Score = 37.0 bits (84), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 71/162 (43%), Gaps = 33/162 (20%)
Query: 24 DSNKQHVTDFLASNSGLSGSVPDTTIGKLSKLQSLDLSENNITALPSDLWSLGSLKSLNL 83
D+ H+++ L L+ +P T +L L+L +T L D +L L +L+L
Sbjct: 32 DTTILHLSENLLYTFSLATLMPYT------RLTQLNLDRCELTKLQVD-GTLPVLGTLDL 84
Query: 84 SYNRISGSLPSNIGNFGLLEVFDLSNNNFSGEIPAAISSLVSLRVLKLDGNMFQWSIPPG 143
S+N++ SLP L V D+S N + A+ L L+ L L GN + ++PPG
Sbjct: 85 SHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELK-TLPPG 142
Query: 144 LLNCQSLVTVDLSMNQLNGSLPDGFGAAFPKLKSLNLAGNEI 185
LL PKL+ L+LA N++
Sbjct: 143 LL------------------------TPTPKLEKLSLANNQL 160
Score = 29.6 bits (65), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 85/195 (43%), Gaps = 21/195 (10%)
Query: 45 PDTTIGKLSKLQSLDLSENNITALPSDLWSLGSLKSL--NLSYN-RISGSLPSNIGNFGL 101
P + K++ ++ + +TALP DL ++ L NL Y ++ +P
Sbjct: 2 PICEVSKVASHLEVNCDKRQLTALPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQLN 61
Query: 102 LEVFDLSNNNFSGEIPAAISSLVSLRVLKLDGNMFQWSIPPGLLNCQSLVTVDLSMNQLN 161
L+ +L+ G +P L L L N Q S+P +L +D+S N+L
Sbjct: 62 LDRCELTKLQVDGTLPV-------LGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLT 113
Query: 162 GSLPDGFGAAFPKLKSLNLAGNEIKGRDTHFAGLKSIT----NLNISGNLFQGSVMGVF- 216
SLP G +L+ L L GNE+K T GL + T L+++ N G+
Sbjct: 114 -SLPLGALRGLGELQELYLKGNELK---TLPPGLLTPTPKLEKLSLANNQLTELPAGLLN 169
Query: 217 -LESLEVIDLRSNQF 230
LE+L+ + L+ N
Sbjct: 170 GLENLDTLLLQENSL 184
Score = 29.6 bits (65), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 286 EFPQIGTLLGLEHLNLSRTSLIGDIPSEILQLSSLHTLDLSMNHLTGQIPTVSAKNLGII 345
+ P+ T+L L L SL +P L +L +L+ + G +P LG +
Sbjct: 28 DLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRCELTKLQVDGTLPV-----LGTL 82
Query: 346 DMSHNNLSGEIPASLLEKLPQMERFNFSYNNLT 378
D+SHN L +P L + LP + + S+N LT
Sbjct: 83 DLSHNQLQS-LPL-LGQTLPALTVLDVSFNRLT 113
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 113/304 (37%), Gaps = 59/304 (19%)
Query: 516 LAEGKFGPVYRGFL------PGGIHVAVKVLVHGSTLTDQ-EAARELEYLGRIKHPNLVP 568
L G FG VY G + P + VAVK L + D+ + E + ++ H N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 569 LTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEG 628
G + R + + M G+L++ L + S
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRE-------------------TRPRPSQPSSLA 139
Query: 629 LLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLS---DFGLAK 685
+L IA G + L H IHRDI A + L R++ DFG+A+
Sbjct: 140 MLDLLHVARDIACG-CQYLEENH------FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 192
Query: 686 IFGNGLDEEIARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT-GKKPLGDD 741
+G +P ++ P++ T K+D + +GV+L E+ + G P
Sbjct: 193 DIYRA--SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP---- 246
Query: 742 YPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSM 801
YP + ++ +V G R +DP GP +I C P RP+
Sbjct: 247 YPSKSNQEVLEFV------TSGGR-MDPPKNCPGP------VYRIMTQCWQHQPEDRPNF 293
Query: 802 QQIV 805
I+
Sbjct: 294 AIIL 297
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 105/236 (44%), Gaps = 51/236 (21%)
Query: 515 LLAEGKFGPVYRG-FLPGG----IHVAVKVLVHGSTLTDQEAARE-LEYLGRIKHPNLVP 568
+L G FG V++G ++P G I V +KV+ S +A + + +G + H ++V
Sbjct: 20 VLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVR 79
Query: 569 LTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEG 628
L G C +LQ + LPLG + Q+ G+ G
Sbjct: 80 LLGLC-------------PGSSLQLVTQYLPLG-------------SLLDHVRQHRGALG 113
Query: 629 --LLTTWRFRHKIALGTARALAFLH-HGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAK 685
LL W + A+ + +L HG ++HR++ A +V L + +++DFG+A
Sbjct: 114 PQLLLNW------GVQIAKGMYYLEEHG----MVHRNLAARNVLLKSPSQVQVADFGVAD 163
Query: 686 IFGNGLDEEIARGSPGYIPPEFAQPDSDF---PTPKSDVYCYGVVLLELIT-GKKP 737
+ D++ S P ++ +S T +SDV+ YGV + EL+T G +P
Sbjct: 164 LLPP--DDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEP 217
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 100/243 (41%), Gaps = 51/243 (20%)
Query: 504 LSATSNFDRGTLLAEGKFGPVY--RGFLPGGIHVAVKVLVHGSTL-TDQEAARELEYLGR 560
L + NF + + EG +G VY R L G + K+ + T A RE+ L
Sbjct: 1 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 60
Query: 561 IKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNL-----LHDLPLGVQXXXXXXXXXXXX 615
+ HPN+V L ++ +++++ + +L++ L +PL
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLP-------------- 105
Query: 616 XXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLE 675
L+ ++ F+ + LAF H S ++HRD+K ++ ++
Sbjct: 106 -------------LIKSYLFQ------LLQGLAFCH---SHRVLHRDLKPQNLLINTEGA 143
Query: 676 PRLSDFGLAKIFG---NGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELI 732
+L+DFGLA+ FG E+ + Y PE + T D++ G + E++
Sbjct: 144 IKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYST-AVDIWSLGCIFAEMV 200
Query: 733 TGK 735
T +
Sbjct: 201 TRR 203
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 98/243 (40%), Gaps = 51/243 (20%)
Query: 504 LSATSNFDRGTLLAEGKFGPVY--RGFLPGGIHVAVKVLVHGSTL-TDQEAARELEYLGR 560
L + NF + + EG +G VY R L G + K+ + T A RE+ L
Sbjct: 3 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 62
Query: 561 IKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNL-----LHDLPLGVQXXXXXXXXXXXX 615
+ HPN+V L ++ +++++ +L+ L +PL
Sbjct: 63 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLP-------------- 107
Query: 616 XXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLE 675
L+ ++ F+ + LAF H S ++HRD+K ++ ++
Sbjct: 108 -------------LIKSYLFQ------LLQGLAFCH---SHRVLHRDLKPQNLLINTEGA 145
Query: 676 PRLSDFGLAKIFG---NGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELI 732
+L+DFGLA+ FG E+ + Y PE + T D++ G + E++
Sbjct: 146 IKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYST-AVDIWSLGCIFAEMV 202
Query: 733 TGK 735
T +
Sbjct: 203 TRR 205
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 18/107 (16%)
Query: 639 IALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEI--- 695
I L A A+ FLH S ++HRD+K S+++ M+ ++ DFGL +E+
Sbjct: 123 IFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 179
Query: 696 -----AR-----GSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELI 732
AR G+ Y+ PE Q + + K D++ G++L EL+
Sbjct: 180 PMPAYARHTGQVGTKLYMSPE--QIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 658 IIHRDIKASSVYLDMNLEPRLS--DFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFP 715
+ HRD+K + LD + PRL DFG +K + G+P YI PE ++
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLL-KKEYD 194
Query: 716 TPKSDVYCYGVVLLELITGKKPLGDDYPEE 745
+DV+ GV L ++ G P D PEE
Sbjct: 195 GKVADVWSCGVTLYVMLVGAYPFED--PEE 222
>pdb|3P72|A Chain A, Structure Of Platelet Glycoprotein 1b Alpha With A Bound
Peptide Inhibitor
Length = 269
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 61/121 (50%), Gaps = 5/121 (4%)
Query: 50 GKLSKLQSLDLSENNITALPSDLWSLGSLKSLNLSYNRISGSLP-SNIGNFGLLEVFDLS 108
G L L +LDLS N + +LP +L +L L++S+NR++ SLP + G L+ L
Sbjct: 74 GTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLT-SLPLGALRGLGELQELYLK 132
Query: 109 NNNFSGEIPAAISSLVSLRVLKLDGNMFQWSIPPGLLN-CQSLVTVDLSMNQLNGSLPDG 167
N P ++ L L L N +P GLLN ++L T+ L N L ++P G
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNQLT-ELPAGLLNGLENLDTLLLQENSLY-TIPKG 190
Query: 168 F 168
F
Sbjct: 191 F 191
Score = 37.0 bits (84), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 71/162 (43%), Gaps = 33/162 (20%)
Query: 24 DSNKQHVTDFLASNSGLSGSVPDTTIGKLSKLQSLDLSENNITALPSDLWSLGSLKSLNL 83
D+ H+++ L L+ +P T +L L+L +T L D +L L +L+L
Sbjct: 32 DTTILHLSENLLYTFSLATLMPYT------RLTQLNLDRCELTKLQVD-GTLPVLGTLDL 84
Query: 84 SYNRISGSLPSNIGNFGLLEVFDLSNNNFSGEIPAAISSLVSLRVLKLDGNMFQWSIPPG 143
S+N++ SLP L V D+S N + A+ L L+ L L GN + ++PPG
Sbjct: 85 SHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELK-TLPPG 142
Query: 144 LLNCQSLVTVDLSMNQLNGSLPDGFGAAFPKLKSLNLAGNEI 185
LL PKL+ L+LA N++
Sbjct: 143 LL------------------------TPTPKLEKLSLANNQL 160
Score = 29.6 bits (65), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 85/195 (43%), Gaps = 21/195 (10%)
Query: 45 PDTTIGKLSKLQSLDLSENNITALPSDLWSLGSLKSL--NLSYN-RISGSLPSNIGNFGL 101
P + K++ ++ + +TALP DL ++ L NL Y ++ +P
Sbjct: 2 PICEVSKVASHLEVNCDKRQLTALPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQLN 61
Query: 102 LEVFDLSNNNFSGEIPAAISSLVSLRVLKLDGNMFQWSIPPGLLNCQSLVTVDLSMNQLN 161
L+ +L+ G +P L L L N Q S+P +L +D+S N+L
Sbjct: 62 LDRCELTKLQVDGTLPV-------LGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLT 113
Query: 162 GSLPDGFGAAFPKLKSLNLAGNEIKGRDTHFAGLKSIT----NLNISGNLFQGSVMGVF- 216
SLP G +L+ L L GNE+K T GL + T L+++ N G+
Sbjct: 114 -SLPLGALRGLGELQELYLKGNELK---TLPPGLLTPTPKLEKLSLANNQLTELPAGLLN 169
Query: 217 -LESLEVIDLRSNQF 230
LE+L+ + L+ N
Sbjct: 170 GLENLDTLLLQENSL 184
Score = 29.6 bits (65), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 286 EFPQIGTLLGLEHLNLSRTSLIGDIPSEILQLSSLHTLDLSMNHLTGQIPTVSAKNLGII 345
+ P+ T+L L L SL +P L +L +L+ + G +P LG +
Sbjct: 28 DLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRCELTKLQVDGTLPV-----LGTL 82
Query: 346 DMSHNNLSGEIPASLLEKLPQMERFNFSYNNLT 378
D+SHN L +P L + LP + + S+N LT
Sbjct: 83 DLSHNQLQS-LPL-LGQTLPALTVLDVSFNRLT 113
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIP 704
R L ++H S IIHRD+K S++ ++ + E ++ DFGLA+ + + +A + Y
Sbjct: 156 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVA--TRWYRA 210
Query: 705 PEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE + D++ G ++ EL+TG+
Sbjct: 211 PEIMLNWMHY-NQTVDIWSVGCIMAELLTGR 240
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 98/243 (40%), Gaps = 51/243 (20%)
Query: 504 LSATSNFDRGTLLAEGKFGPVY--RGFLPGGIHVAVKVLVHGSTL-TDQEAARELEYLGR 560
L + NF + + EG +G VY R L G + K+ + T A RE+ L
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 561 IKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNL-----LHDLPLGVQXXXXXXXXXXXX 615
+ HPN+V L ++ +++++ +L+ L +PL
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLP-------------- 106
Query: 616 XXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLE 675
L+ ++ F+ + LAF H S ++HRD+K ++ ++
Sbjct: 107 -------------LIKSYLFQ------LLQGLAFCH---SHRVLHRDLKPQNLLINTEGA 144
Query: 676 PRLSDFGLAKIFG---NGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELI 732
+L+DFGLA+ FG E+ + Y PE + T D++ G + E++
Sbjct: 145 IKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYST-AVDIWSLGCIFAEMV 201
Query: 733 TGK 735
T +
Sbjct: 202 TRR 204
>pdb|1P8T|A Chain A, Crystal Structure Of Nogo-66 Receptor
Length = 285
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 8/108 (7%)
Query: 43 SVPDTTIGKLSKLQSLDLSENNITALPSDLWS-LGSLKSLNLSYNRISGSLPSNIGNFGL 101
++PD T L L L L N I+++P + L SL L L NR++ P + G
Sbjct: 142 ALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGR 201
Query: 102 LEVFDLSNNNFSGEIPAAISSLVSLRVLKLDGNMFQWSIPPGLLNCQS 149
L L NN S A++ L +L+ L+L+ N P + +C++
Sbjct: 202 LMTLYLFANNLSALPTEALAPLRALQYLRLNDN-------PWVCDCRA 242
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIP 704
R L ++H S IIHRD+K S++ ++ + E ++ DFGLA+ + + +A + Y
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVA--TRWYRA 190
Query: 705 PEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE + D++ G ++ EL+TG+
Sbjct: 191 PEIMLNWMHY-NQTVDIWSVGCIMAELLTGR 220
>pdb|1OZN|A Chain A, 1.5a Crystal Structure Of The Nogo Receptor Ligand Binding
Domain Reveals A Convergent Recognition Scaffold
Mediating Inhibition Of Myelination
Length = 285
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 8/108 (7%)
Query: 43 SVPDTTIGKLSKLQSLDLSENNITALPSDLWS-LGSLKSLNLSYNRISGSLPSNIGNFGL 101
++PD T L L L L N I+++P + L SL L L NR++ P + G
Sbjct: 143 ALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGR 202
Query: 102 LEVFDLSNNNFSGEIPAAISSLVSLRVLKLDGNMFQWSIPPGLLNCQS 149
L L NN S A++ L +L+ L+L+ N P + +C++
Sbjct: 203 LMTLYLFANNLSALPTEALAPLRALQYLRLNDN-------PWVCDCRA 243
>pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
pdb|3RFS|B Chain B, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 272
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 79/174 (45%), Gaps = 19/174 (10%)
Query: 172 FPKLKSLNLAGNEIKGRDTHFAGLKSITNLN---ISGNLFQGSVMGVF--LESLEVIDLR 226
P ++ L L GN++ + LK +TNL ++GN Q GVF L +L+ + L
Sbjct: 62 LPNVRYLALGGNKLH----DISALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLV 117
Query: 227 SNQFQGHISQVQFNSSYNWSRLVYVDLSENQLSGEIFHNFSQAQNLKHLSLAYNRFTRQE 286
NQ Q V F+ N L Y++L+ NQL F + NL L L+YN+ Q
Sbjct: 118 ENQLQSLPDGV-FDKLTN---LTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQL--QS 171
Query: 287 FPQ--IGTLLGLEHLNLSRTSLIGDIPSEIL-QLSSLHTLDLSMNHLTGQIPTV 337
P+ L L+ L L + L +P + +L+SL + L N P +
Sbjct: 172 LPEGVFDKLTQLKDLRLYQNQL-KSVPDGVFDRLTSLQYIWLHDNPWDCTCPGI 224
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 4/106 (3%)
Query: 43 SVPDTTIGKLSKLQSLDLSENNITALPSDLW-SLGSLKSLNLSYNRISGSLPSNI-GNFG 100
S+P+ KL+ L+ L L EN + +LP ++ L +L LNL++N++ SLP +
Sbjct: 99 SLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQ-SLPKGVFDKLT 157
Query: 101 LLEVFDLSNNNFSGEIPAAISSLVSLRVLKLDGNMFQWSIPPGLLN 146
L DLS N L L+ L+L N + S+P G+ +
Sbjct: 158 NLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLK-SVPDGVFD 202
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 43 SVPDTTIGKLSKLQSLDLSENNITALPSDLW-SLGSLKSLNLSYNRISGSLPSNI-GNFG 100
S+PD KL+ L L+L+ N + +LP ++ L +L L+LSYN++ SLP +
Sbjct: 123 SLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQ-SLPEGVFDKLT 181
Query: 101 LLEVFDLSNNNFSGEIPAAISSLVSLRVLKLDGNMFQWSIP 141
L+ L N L SL+ + L N + + P
Sbjct: 182 QLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 222
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 271 NLKHLSLAYNRFTRQEFPQIGTLLGLEHLNLSRTSLIGDIPSEIL-QLSSLHTLDLSMNH 329
N+++L+L N+ + + L L +L L+ L +P+ + +L++L L L N
Sbjct: 64 NVRYLALGGNKL--HDISALKELTNLTYLILTGNQL-QSLPNGVFDKLTNLKELVLVENQ 120
Query: 330 LTGQIPTVSAK--NLGIIDMSHNNLSGEIPASLLEKLPQMERFNFSYNNL 377
L V K NL ++++HN L +P + +KL + + SYN L
Sbjct: 121 LQSLPDGVFDKLTNLTYLNLAHNQLQS-LPKGVFDKLTNLTELDLSYNQL 169
>pdb|3ULU|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form1)
pdb|3ULV|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form2)
Length = 694
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 117/270 (43%), Gaps = 26/270 (9%)
Query: 124 VSLRVLKLDGNMFQWSIPPGLLNCQSLVTVDLSMNQLNGSLPDGFGAAFPKLKSLNLAGN 183
++ VL L N + L ++D+ N ++ P+ P LK LNL N
Sbjct: 35 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPE-LCQKLPMLKVLNLQHN 93
Query: 184 EI-KGRDTHFAGLKSITNLNISGNLFQGSVMGVFLE--SLEVIDLRSNQFQGHISQVQFN 240
E+ + D FA ++T L++ N Q F++ +L +DL N +S +
Sbjct: 94 ELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNG----LSSTKLG 149
Query: 241 SSYNWSRLVYVDLSENQLSG------EIFHNFSQAQNLKHLSLAYNR---FTRQEFPQIG 291
+ L + LS N++ +IF N S LK L L+ N+ F+ F IG
Sbjct: 150 TQVQLENLQELLLSNNKIQALKSEELDIFANSS----LKKLELSSNQIKEFSPGCFHAIG 205
Query: 292 TLLGLEHLNLSRTSLIGDIPSEILQLSSLHTLDLSMNHLTGQIPT----VSAKNLGIIDM 347
L GL N+ + + L +S+ L LS + L+ T + NL ++D+
Sbjct: 206 RLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDL 265
Query: 348 SHNNLSGEIPASLLEKLPQMERFNFSYNNL 377
S+NNL+ + LPQ+E F YNN+
Sbjct: 266 SYNNLNV-VGNDSFAWLPQLEYFFLEYNNI 294
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 117/278 (42%), Gaps = 32/278 (11%)
Query: 58 LDLSENNITALPS-DLWSLGSLKSLNLSYNRISGSLPSNIGNFGLLEVFDLSNNNFSGEI 116
L+L+ N + LP+ + L SL++ +N IS P +L+V +L +N S
Sbjct: 40 LNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLS 99
Query: 117 PAAISSLVSLRVLKLDGNMFQWSIPPGLLNCQSLVTVDLSMNQLNGSLPDGFGAAFPKLK 176
+ +L L L N Q + ++L+T+DLS N L S G L+
Sbjct: 100 DKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGL-SSTKLGTQVQLENLQ 158
Query: 177 SLNLAGNEI---KGRDTHFAGLKSITNLNISGNLFQ----------GSVMGVFLESLEV- 222
L L+ N+I K + S+ L +S N + G + G+FL ++++
Sbjct: 159 ELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLG 218
Query: 223 --------IDLRSNQFQG-HISQVQFNSSYN-------WSRLVYVDLSENQLSGEIFHNF 266
++L + + +S Q +++ N W+ L +DLS N L+ +F
Sbjct: 219 PSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSF 278
Query: 267 SQAQNLKHLSLAYNRFTRQEFPQIGTLLGLEHLNLSRT 304
+ L++ L YN + L + +LNL R+
Sbjct: 279 AWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRS 316
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 152/358 (42%), Gaps = 87/358 (24%)
Query: 36 SNSGLSGSVPDTTIG-KLSKLQSLDLSENNITALPSDLWS-LGSLKSLNLSYNRISGSLP 93
SNS LS + T +G K + L LDLS NN+ + +D ++ L L+ L YN I
Sbjct: 240 SNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQ---- 295
Query: 94 SNIGNFGLLEVFDLSNNNFSGEIPAAISSLVSLRVLKLDGNMFQWSIPPGLLNCQSLVTV 153
++ + L +F++ N SL SL K+D FQW L C
Sbjct: 296 -HLFSHSLHGLFNVRYLNLKRSFTKQSISLASLP--KIDDFSFQW------LKC------ 340
Query: 154 DLSMNQLNGSLPDGFGAAFPKLKSLNLAGNEIKG-RDTHFAGLKSITNLNISGN------ 206
L+ LN+ N+I G + F GL ++ L++S +
Sbjct: 341 ---------------------LEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRT 379
Query: 207 LFQGSVMGVFLESLEVIDLRSNQFQGHISQVQFNSSYNW-SRLVYVDLSENQLSGEIF-H 264
L + + + L +++L N+ IS+++ + +++W L +DL N++ E+
Sbjct: 380 LTNETFVSLAHSPLHILNLTKNK----ISKIE-SDAFSWLGHLEVLDLGLNEIGQELTGQ 434
Query: 265 NFSQAQNLKHLSLAYNRF---TRQEFPQIGTLLGLEHLNLSRTSL--IGDIPSEILQLSS 319
+ +N+ + L+YN++ TR F + +L + L L R +L + PS
Sbjct: 435 EWRGLENIFEIYLSYNKYLQLTRNSFALVPSL---QRLMLRRVALKNVDSSPS------- 484
Query: 320 LHTLDLSMNHLTGQIPTVSAKNLGIIDMSHNNLSGEIPASLLEKLPQMERFNFSYNNL 377
P +NL I+D+S NN I +LE L ++E + +NNL
Sbjct: 485 ---------------PFQPLRNLTILDLS-NNNIANINDDMLEGLEKLEILDLQHNNL 526
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 77/178 (43%), Gaps = 13/178 (7%)
Query: 49 IGKLSKLQSLDLSENNITALPSDLWSLGSLKSLNLSYNRISGSLPSNIGNFGLLEVFDLS 108
+ L +L ++ N+ + PS L +L L+LS N I+ + LE+ DL
Sbjct: 463 VPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQ 522
Query: 109 NNNFSGEIPAA--------ISSLVSLRVLKLDGNMFQWSIPPGLL-NCQSLVTVDLSMNQ 159
+NN + A + L L +L L+ N F IP + + L +DL +N
Sbjct: 523 HNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFD-EIPVEVFKDLFELKIIDLGLNN 581
Query: 160 LNGSLPDGFGAAFPKLKSLNLAGNEIKGRDTHFAG--LKSITNLNISGNLFQGSVMGV 215
LN +LP LKSLNL N I + G +++T L++ N F + +
Sbjct: 582 LN-TLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCESI 638
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 105/236 (44%), Gaps = 51/236 (21%)
Query: 515 LLAEGKFGPVYRG-FLPGG----IHVAVKVLVHGSTLTDQEAARE-LEYLGRIKHPNLVP 568
+L G FG V++G ++P G I V +KV+ S +A + + +G + H ++V
Sbjct: 38 VLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVR 97
Query: 569 LTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEG 628
L G C +LQ + LPLG + Q+ G+ G
Sbjct: 98 LLGLC-------------PGSSLQLVTQYLPLG-------------SLLDHVRQHRGALG 131
Query: 629 --LLTTWRFRHKIALGTARALAFLH-HGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAK 685
LL W + A+ + +L HG ++HR++ A +V L + +++DFG+A
Sbjct: 132 PQLLLNW------GVQIAKGMYYLEEHG----MVHRNLAARNVLLKSPSQVQVADFGVAD 181
Query: 686 IFGNGLDEEIARGSPGYIPPEFAQPDSDF---PTPKSDVYCYGVVLLELIT-GKKP 737
+ D++ S P ++ +S T +SDV+ YGV + EL+T G +P
Sbjct: 182 LLPP--DDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEP 235
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIP 704
R L ++H S IIHRD+K S++ ++ + E ++ DFGLA+ + + +A + Y
Sbjct: 159 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVA--TRWYRA 213
Query: 705 PEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE + D++ G ++ EL+TG+
Sbjct: 214 PEIMLNWMHY-NQTVDIWSVGCIMAELLTGR 243
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIP 704
R L ++H S IIHRD+K S++ ++ + E ++ DFGLA+ + + +A + Y
Sbjct: 148 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA--TRWYRA 202
Query: 705 PEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE + D++ G ++ EL+TG+
Sbjct: 203 PEIMLNWMHY-NQTVDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIP 704
R L ++H S IIHRD+K S++ ++ + E ++ DFGLA+ + + +A + Y
Sbjct: 148 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA--TRWYRA 202
Query: 705 PEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE + D++ G ++ EL+TG+
Sbjct: 203 PEIMLNWMHY-NQTVDIWSVGCIMAELLTGR 232
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 98/232 (42%), Gaps = 49/232 (21%)
Query: 515 LLAEGKFGPVYRGFL-PGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYC 573
++ G FG VY+ L G VA+K ++ G + REL+ + ++ H N+V L +
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN----RELQIMRKLDHCNIVRLRYFF 82
Query: 574 IA-GDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTT 632
+ G+++ +Y L +L +P V ++ L
Sbjct: 83 YSSGEKKDEVY-------LNLVLDYVPETVYRVARHYSRAKQTLPVIYVK-------LYM 128
Query: 633 WRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEP-RLSDFGLAKIFGNGL 691
++ R+LA++H S I HRDIK ++ LD + +L DFG AK
Sbjct: 129 YQL--------FRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK------ 171
Query: 692 DEEIARGSPG--------YIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
++ RG P Y PE +D+ T DV+ G VL EL+ G+
Sbjct: 172 --QLVRGEPNVSYICSRYYRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQ 220
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 100/243 (41%), Gaps = 51/243 (20%)
Query: 504 LSATSNFDRGTLLAEGKFGPVY--RGFLPGGIHVAVKVLVHGSTL-TDQEAARELEYLGR 560
L + NF + + EG +G VY R L G + K+ + T A RE+ L
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 561 IKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNL-----LHDLPLGVQXXXXXXXXXXXX 615
+ HPN+V L ++ +++++ + +L++ L +PL
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLP-------------- 106
Query: 616 XXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLE 675
L+ ++ F+ + LAF H S ++HRD+K ++ ++
Sbjct: 107 -------------LIKSYLFQ------LLQGLAFCH---SHRVLHRDLKPQNLLINTEGA 144
Query: 676 PRLSDFGLAKIFG---NGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELI 732
+L+DFGLA+ FG E+ + Y PE + T D++ G + E++
Sbjct: 145 IKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYST-AVDIWSLGCIFAEMV 201
Query: 733 TGK 735
T +
Sbjct: 202 TRR 204
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 113/304 (37%), Gaps = 59/304 (19%)
Query: 516 LAEGKFGPVYRGFL------PGGIHVAVKVLVHGSTLTDQ-EAARELEYLGRIKHPNLVP 568
L G FG VY G + P + VAVK L + D+ + E + ++ H N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 569 LTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEG 628
G + R + + M G+L++ L + S
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRE-------------------TRPRPSQPSSLA 153
Query: 629 LLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLS---DFGLAK 685
+L IA G + L H IHRDI A + L R++ DFG+A+
Sbjct: 154 MLDLLHVARDIACG-CQYLEENH------FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
Query: 686 IFGNGLDEEIARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT-GKKPLGDD 741
+G +P ++ P++ T K+D + +GV+L E+ + G P
Sbjct: 207 DIYRA--SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP---- 260
Query: 742 YPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSM 801
YP + ++ +V G R +DP GP +I C P RP+
Sbjct: 261 YPSKSNQEVLEFV------TSGGR-MDPPKNCPGP------VYRIMTQCWQHQPEDRPNF 307
Query: 802 QQIV 805
I+
Sbjct: 308 AIIL 311
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 74/197 (37%), Gaps = 43/197 (21%)
Query: 554 ELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXX 613
EL HPN+VP IA ++ + +M G+ ++L+ +
Sbjct: 76 ELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMD------------ 123
Query: 614 XXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMN 673
G L + I G +AL ++HH +HR +KAS + + ++
Sbjct: 124 -----------GMNELAIAY-----ILQGVLKALDYIHHMG---YVHRSVKASHILISVD 164
Query: 674 LEPRLSDFGLAK---IFGNGLDEEIARGSPGY-------IPPEFAQPDSDFPTPKSDVYC 723
+ LS GL + +G + + P Y + PE Q + KSD+Y
Sbjct: 165 GKVYLS--GLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYS 222
Query: 724 YGVVLLELITGKKPLGD 740
G+ EL G P D
Sbjct: 223 VGITACELANGHVPFKD 239
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIP 704
R L ++H S IIHRD+K S++ ++ + E ++ DFGLA+ + + +A + Y
Sbjct: 147 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA--TRWYRA 201
Query: 705 PEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE + D++ G ++ EL+TG+
Sbjct: 202 PEIMLNWMHY-NQTVDIWSVGCIMAELLTGR 231
>pdb|2A0Z|A Chain A, The Molecular Structure Of Toll-like Receptor 3 Ligand
Binding Domain
Length = 705
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 117/270 (43%), Gaps = 26/270 (9%)
Query: 124 VSLRVLKLDGNMFQWSIPPGLLNCQSLVTVDLSMNQLNGSLPDGFGAAFPKLKSLNLAGN 183
++ VL L N + L ++D+ N ++ P+ P LK LNL N
Sbjct: 30 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPE-LCQKLPMLKVLNLQHN 88
Query: 184 EI-KGRDTHFAGLKSITNLNISGNLFQGSVMGVFLE--SLEVIDLRSNQFQGHISQVQFN 240
E+ + D FA ++T L++ N Q F++ +L +DL N +S +
Sbjct: 89 ELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNG----LSSTKLG 144
Query: 241 SSYNWSRLVYVDLSENQLSG------EIFHNFSQAQNLKHLSLAYNR---FTRQEFPQIG 291
+ L + LS N++ +IF N S LK L L+ N+ F+ F IG
Sbjct: 145 TQVQLENLQELLLSNNKIQALKSEELDIFANSS----LKKLELSSNQIKEFSPGCFHAIG 200
Query: 292 TLLGLEHLNLSRTSLIGDIPSEILQLSSLHTLDLSMNHLTGQIPT----VSAKNLGIIDM 347
L GL N+ + + L +S+ L LS + L+ T + NL ++D+
Sbjct: 201 RLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDL 260
Query: 348 SHNNLSGEIPASLLEKLPQMERFNFSYNNL 377
S+NNL+ + LPQ+E F YNN+
Sbjct: 261 SYNNLNV-VGNDSFAWLPQLEYFFLEYNNI 289
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 117/278 (42%), Gaps = 32/278 (11%)
Query: 58 LDLSENNITALPS-DLWSLGSLKSLNLSYNRISGSLPSNIGNFGLLEVFDLSNNNFSGEI 116
L+L+ N + LP+ + L SL++ +N IS P +L+V +L +N S
Sbjct: 35 LNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLS 94
Query: 117 PAAISSLVSLRVLKLDGNMFQWSIPPGLLNCQSLVTVDLSMNQLNGSLPDGFGAAFPKLK 176
+ +L L L N Q + ++L+T+DLS N L S G L+
Sbjct: 95 DKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGL-SSTKLGTQVQLENLQ 153
Query: 177 SLNLAGNEI---KGRDTHFAGLKSITNLNISGNLFQ----------GSVMGVFLESLEV- 222
L L+ N+I K + S+ L +S N + G + G+FL ++++
Sbjct: 154 ELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLG 213
Query: 223 --------IDLRSNQFQG-HISQVQFNSSYN-------WSRLVYVDLSENQLSGEIFHNF 266
++L + + +S Q +++ N W+ L +DLS N L+ +F
Sbjct: 214 PSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSF 273
Query: 267 SQAQNLKHLSLAYNRFTRQEFPQIGTLLGLEHLNLSRT 304
+ L++ L YN + L + +LNL R+
Sbjct: 274 AWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRS 311
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 152/358 (42%), Gaps = 87/358 (24%)
Query: 36 SNSGLSGSVPDTTIG-KLSKLQSLDLSENNITALPSDLWS-LGSLKSLNLSYNRISGSLP 93
SNS LS + T +G K + L LDLS NN+ + +D ++ L L+ L YN I
Sbjct: 235 SNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQ---- 290
Query: 94 SNIGNFGLLEVFDLSNNNFSGEIPAAISSLVSLRVLKLDGNMFQWSIPPGLLNCQSLVTV 153
++ + L +F++ N SL SL K+D FQW L C
Sbjct: 291 -HLFSHSLHGLFNVRYLNLKRSFTKQSISLASLP--KIDDFSFQW------LKC------ 335
Query: 154 DLSMNQLNGSLPDGFGAAFPKLKSLNLAGNEIKG-RDTHFAGLKSITNLNISGN------ 206
L+ LN+ N+I G + F GL ++ L++S +
Sbjct: 336 ---------------------LEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRT 374
Query: 207 LFQGSVMGVFLESLEVIDLRSNQFQGHISQVQFNSSYNW-SRLVYVDLSENQLSGEIF-H 264
L + + + L +++L N+ IS+++ + +++W L +DL N++ E+
Sbjct: 375 LTNETFVSLAHSPLHILNLTKNK----ISKIE-SDAFSWLGHLEVLDLGLNEIGQELTGQ 429
Query: 265 NFSQAQNLKHLSLAYNRF---TRQEFPQIGTLLGLEHLNLSRTSL--IGDIPSEILQLSS 319
+ +N+ + L+YN++ TR F + +L + L L R +L + PS
Sbjct: 430 EWRGLENIFEIYLSYNKYLQLTRNSFALVPSL---QRLMLRRVALKNVDSSPS------- 479
Query: 320 LHTLDLSMNHLTGQIPTVSAKNLGIIDMSHNNLSGEIPASLLEKLPQMERFNFSYNNL 377
P +NL I+D+S NN I +LE L ++E + +NNL
Sbjct: 480 ---------------PFQPLRNLTILDLS-NNNIANINDDMLEGLEKLEILDLQHNNL 521
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 77/178 (43%), Gaps = 13/178 (7%)
Query: 49 IGKLSKLQSLDLSENNITALPSDLWSLGSLKSLNLSYNRISGSLPSNIGNFGLLEVFDLS 108
+ L +L ++ N+ + PS L +L L+LS N I+ + LE+ DL
Sbjct: 458 VPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQ 517
Query: 109 NNNFSGEIPAA--------ISSLVSLRVLKLDGNMFQWSIPPGLL-NCQSLVTVDLSMNQ 159
+NN + A + L L +L L+ N F IP + + L +DL +N
Sbjct: 518 HNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFD-EIPVEVFKDLFELKIIDLGLNN 576
Query: 160 LNGSLPDGFGAAFPKLKSLNLAGNEIKGRDTHFAG--LKSITNLNISGNLFQGSVMGV 215
LN +LP LKSLNL N I + G +++T L++ N F + +
Sbjct: 577 LN-TLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCESI 633
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIP 704
R L ++H S IIHRD+K S++ ++ + E ++ DFGLA+ + + +A + Y
Sbjct: 142 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA--TRWYRA 196
Query: 705 PEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE + D++ G ++ EL+TG+
Sbjct: 197 PEIMLNWMHY-NQTVDIWSVGCIMAELLTGR 226
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 112/304 (36%), Gaps = 59/304 (19%)
Query: 516 LAEGKFGPVYRGFL------PGGIHVAVKVLVHGSTLTDQ-EAARELEYLGRIKHPNLVP 568
L G FG VY G + P + VAVK L + D+ + E + + H N+V
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 569 LTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEG 628
G + R + + M G+L++ L + S
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRE-------------------TRPRPSQPSSLA 145
Query: 629 LLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLS---DFGLAK 685
+L IA G + L H IHRDI A + L R++ DFG+A+
Sbjct: 146 MLDLLHVARDIACG-CQYLEENH------FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 198
Query: 686 IFGNGLDEEIARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT-GKKPLGDD 741
+G +P ++ P++ T K+D + +GV+L E+ + G P
Sbjct: 199 DIYRA--SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP---- 252
Query: 742 YPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSM 801
YP + ++ +V G R +DP GP +I C P RP+
Sbjct: 253 YPSKSNQEVLEFV------TSGGR-MDPPKNCPGP------VYRIMTQCWQHQPEDRPNF 299
Query: 802 QQIV 805
I+
Sbjct: 300 AIIL 303
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIP 704
R L ++H S IIHRD+K S++ ++ + E ++ DFGLA+ + + +A + Y
Sbjct: 148 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA--TRWYRA 202
Query: 705 PEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE + D++ G ++ EL+TG+
Sbjct: 203 PEIMLNWMHY-NQTVDIWSVGCIMAELLTGR 232
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIP 704
R L ++H S IIHRD+K S++ ++ + E ++ DFGLA+ + + +A + Y
Sbjct: 138 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA--TRWYRA 192
Query: 705 PEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE + D++ G ++ EL+TG+
Sbjct: 193 PEIMLNWMHY-NQTVDIWSVGCIMAELLTGR 222
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIP 704
R L ++H S IIHRD+K S++ ++ + E ++ DFGLA+ + + +A + Y
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA--TRWYRA 190
Query: 705 PEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE + D++ G ++ EL+TG+
Sbjct: 191 PEIMLNWMHY-NQTVDIWSVGCIMAELLTGR 220
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 98/232 (42%), Gaps = 49/232 (21%)
Query: 515 LLAEGKFGPVYRGFL-PGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYC 573
++ G FG VY+ L G VA+K ++ G + REL+ + ++ H N+V L +
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN----RELQIMRKLDHCNIVRLRYFF 82
Query: 574 IA-GDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTT 632
+ G+++ +Y L +L +P V ++ L
Sbjct: 83 YSSGEKKDEVY-------LNLVLDYVPETVYRVARHYSRAKQTLPVIYVK-------LYM 128
Query: 633 WRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEP-RLSDFGLAKIFGNGL 691
++ R+LA++H S I HRDIK ++ LD + +L DFG AK
Sbjct: 129 YQL--------FRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK------ 171
Query: 692 DEEIARGSPG--------YIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
++ RG P Y PE +D+ T DV+ G VL EL+ G+
Sbjct: 172 --QLVRGEPNVSYICSRYYRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQ 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIP 704
R L ++H S IIHRD+K S++ ++ + E ++ DFGLA+ + + +A + Y
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA--TRWYRA 190
Query: 705 PEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE + D++ G ++ EL+TG+
Sbjct: 191 PEIMLNWMHY-NQTVDIWSVGCIMAELLTGR 220
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIP 704
R L ++H S IIHRD+K S++ ++ + E ++ DFGLA+ + + +A + Y
Sbjct: 142 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA--TRWYRA 196
Query: 705 PEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE + D++ G ++ EL+TG+
Sbjct: 197 PEIMLNWMHY-NQTVDIWSVGCIMAELLTGR 226
>pdb|1ZIW|A Chain A, Human Toll-Like Receptor 3 Extracellular Domain Structure
Length = 680
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 117/270 (43%), Gaps = 26/270 (9%)
Query: 124 VSLRVLKLDGNMFQWSIPPGLLNCQSLVTVDLSMNQLNGSLPDGFGAAFPKLKSLNLAGN 183
++ VL L N + L ++D+ N ++ P+ P LK LNL N
Sbjct: 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPE-LCQKLPMLKVLNLQHN 83
Query: 184 EI-KGRDTHFAGLKSITNLNISGNLFQGSVMGVFLE--SLEVIDLRSNQFQGHISQVQFN 240
E+ + D FA ++T L++ N Q F++ +L +DL N +S +
Sbjct: 84 ELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNG----LSSTKLG 139
Query: 241 SSYNWSRLVYVDLSENQLSG------EIFHNFSQAQNLKHLSLAYNR---FTRQEFPQIG 291
+ L + LS N++ +IF N S LK L L+ N+ F+ F IG
Sbjct: 140 TQVQLENLQELLLSNNKIQALKSEELDIFANSS----LKKLELSSNQIKEFSPGCFHAIG 195
Query: 292 TLLGLEHLNLSRTSLIGDIPSEILQLSSLHTLDLSMNHLTGQIPT----VSAKNLGIIDM 347
L GL N+ + + L +S+ L LS + L+ T + NL ++D+
Sbjct: 196 RLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDL 255
Query: 348 SHNNLSGEIPASLLEKLPQMERFNFSYNNL 377
S+NNL+ + LPQ+E F YNN+
Sbjct: 256 SYNNLNV-VGNDSFAWLPQLEYFFLEYNNI 284
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 117/278 (42%), Gaps = 32/278 (11%)
Query: 58 LDLSENNITALPS-DLWSLGSLKSLNLSYNRISGSLPSNIGNFGLLEVFDLSNNNFSGEI 116
L+L+ N + LP+ + L SL++ +N IS P +L+V +L +N S
Sbjct: 30 LNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLS 89
Query: 117 PAAISSLVSLRVLKLDGNMFQWSIPPGLLNCQSLVTVDLSMNQLNGSLPDGFGAAFPKLK 176
+ +L L L N Q + ++L+T+DLS N L S G L+
Sbjct: 90 DKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGL-SSTKLGTQVQLENLQ 148
Query: 177 SLNLAGNEI---KGRDTHFAGLKSITNLNISGNLFQ----------GSVMGVFLESLEV- 222
L L+ N+I K + S+ L +S N + G + G+FL ++++
Sbjct: 149 ELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLG 208
Query: 223 --------IDLRSNQFQG-HISQVQFNSSYN-------WSRLVYVDLSENQLSGEIFHNF 266
++L + + +S Q +++ N W+ L +DLS N L+ +F
Sbjct: 209 PSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSF 268
Query: 267 SQAQNLKHLSLAYNRFTRQEFPQIGTLLGLEHLNLSRT 304
+ L++ L YN + L + +LNL R+
Sbjct: 269 AWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRS 306
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 152/358 (42%), Gaps = 87/358 (24%)
Query: 36 SNSGLSGSVPDTTIG-KLSKLQSLDLSENNITALPSDLWS-LGSLKSLNLSYNRISGSLP 93
SNS LS + T +G K + L LDLS NN+ + +D ++ L L+ L YN I
Sbjct: 230 SNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQ---- 285
Query: 94 SNIGNFGLLEVFDLSNNNFSGEIPAAISSLVSLRVLKLDGNMFQWSIPPGLLNCQSLVTV 153
++ + L +F++ N SL SL K+D FQW L C
Sbjct: 286 -HLFSHSLHGLFNVRYLNLKRSFTKQSISLASLP--KIDDFSFQW------LKC------ 330
Query: 154 DLSMNQLNGSLPDGFGAAFPKLKSLNLAGNEIKG-RDTHFAGLKSITNLNISGN------ 206
L+ LN+ N+I G + F GL ++ L++S +
Sbjct: 331 ---------------------LEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRT 369
Query: 207 LFQGSVMGVFLESLEVIDLRSNQFQGHISQVQFNSSYNW-SRLVYVDLSENQLSGEIF-H 264
L + + + L +++L N+ IS+++ + +++W L +DL N++ E+
Sbjct: 370 LTNETFVSLAHSPLHILNLTKNK----ISKIE-SDAFSWLGHLEVLDLGLNEIGQELTGQ 424
Query: 265 NFSQAQNLKHLSLAYNRF---TRQEFPQIGTLLGLEHLNLSRTSL--IGDIPSEILQLSS 319
+ +N+ + L+YN++ TR F + +L + L L R +L + PS
Sbjct: 425 EWRGLENIFEIYLSYNKYLQLTRNSFALVPSL---QRLMLRRVALKNVDSSPS------- 474
Query: 320 LHTLDLSMNHLTGQIPTVSAKNLGIIDMSHNNLSGEIPASLLEKLPQMERFNFSYNNL 377
P +NL I+D+S NN I +LE L ++E + +NNL
Sbjct: 475 ---------------PFQPLRNLTILDLS-NNNIANINDDMLEGLEKLEILDLQHNNL 516
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 77/178 (43%), Gaps = 13/178 (7%)
Query: 49 IGKLSKLQSLDLSENNITALPSDLWSLGSLKSLNLSYNRISGSLPSNIGNFGLLEVFDLS 108
+ L +L ++ N+ + PS L +L L+LS N I+ + LE+ DL
Sbjct: 453 VPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQ 512
Query: 109 NNNFSGEIPAA--------ISSLVSLRVLKLDGNMFQWSIPPGLL-NCQSLVTVDLSMNQ 159
+NN + A + L L +L L+ N F IP + + L +DL +N
Sbjct: 513 HNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFD-EIPVEVFKDLFELKIIDLGLNN 571
Query: 160 LNGSLPDGFGAAFPKLKSLNLAGNEIKGRDTHFAG--LKSITNLNISGNLFQGSVMGV 215
LN +LP LKSLNL N I + G +++T L++ N F + +
Sbjct: 572 LN-TLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCESI 628
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIP 704
R L ++H S IIHRD+K S++ ++ + E ++ DFGLA+ + + +A + Y
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA--TRWYRA 190
Query: 705 PEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE + D++ G ++ EL+TG+
Sbjct: 191 PEIMLNWMHY-NQTVDIWSVGCIMAELLTGR 220
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 82/196 (41%), Gaps = 19/196 (9%)
Query: 628 GLLTTWRFRHKIALG--------TARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLS 679
G L + RH I L +A+LH S IHR++ A +V LD + ++
Sbjct: 103 GSLRDYLPRHSIGLAQLLLFAQQICEGMAYLH---SQHYIHRNLAARNVLLDNDRLVKIG 159
Query: 680 DFGLAKIFGNGLDEEIAR---GSPGY-IPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
DFGLAK G + R SP + PE + + SDV+ +GV L EL+T
Sbjct: 160 DFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYA--SDVWSFGVTLYELLTHC 217
Query: 736 KPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLP 795
P K L+ +G + + + ++ R P+K E + C
Sbjct: 218 D--SSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEA 275
Query: 796 LKRPSMQQIVGLLKDI 811
RP+ + ++ +LK +
Sbjct: 276 SFRPTFENLIPILKTV 291
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIP 704
R L ++H S IIHRD+K S++ ++ + E ++ DFGLA+ + + +A + Y
Sbjct: 159 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA--TRWYRA 213
Query: 705 PEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE + D++ G ++ EL+TG+
Sbjct: 214 PEIMLNWMHY-NQTVDIWSVGCIMAELLTGR 243
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIP 704
R L ++H S IIHRD+K S++ ++ + E ++ DFGLA+ + + +A + Y
Sbjct: 142 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA--TRWYRA 196
Query: 705 PEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE + D++ G ++ EL+TG+
Sbjct: 197 PEIMLNWMHY-NQTVDIWSVGCIMAELLTGR 226
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIP 704
R L ++H S IIHRD+K S++ ++ + E ++ DFGLA+ + + +A + Y
Sbjct: 138 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA--TRWYRA 192
Query: 705 PEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE + D++ G ++ EL+TG+
Sbjct: 193 PEIMLNWMHY-NQTVDIWSVGCIMAELLTGR 222
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIP 704
R L ++H S IIHRD+K S++ ++ + E ++ DFGLA+ + + +A + Y
Sbjct: 141 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA--TRWYRA 195
Query: 705 PEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE + D++ G ++ EL+TG+
Sbjct: 196 PEIMLNWMHY-NQTVDIWSVGCIMAELLTGR 225
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 112/304 (36%), Gaps = 59/304 (19%)
Query: 516 LAEGKFGPVYRGFL------PGGIHVAVKVLVHGSTLTDQ-EAARELEYLGRIKHPNLVP 568
L G FG VY G + P + VAVK L + D+ + E + + H N+V
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 569 LTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEG 628
G + R + + M G+L++ L + S
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRE-------------------TRPRPSQPSSLA 155
Query: 629 LLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLS---DFGLAK 685
+L IA G + L H IHRDI A + L R++ DFG+A+
Sbjct: 156 MLDLLHVARDIACG-CQYLEENH------FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 208
Query: 686 IFGNGLDEEIARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT-GKKPLGDD 741
+G +P ++ P++ T K+D + +GV+L E+ + G P
Sbjct: 209 DIYRA--SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP---- 262
Query: 742 YPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSM 801
YP + ++ +V G R +DP GP +I C P RP+
Sbjct: 263 YPSKSNQEVLEFV------TSGGR-MDPPKNCPGP------VYRIMTQCWQHQPEDRPNF 309
Query: 802 QQIV 805
I+
Sbjct: 310 AIIL 313
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIP 704
R L ++H S IIHRD+K S++ ++ + E ++ DFGLA+ + + +A + Y
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA--TRWYRA 190
Query: 705 PEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE + D++ G ++ EL+TG+
Sbjct: 191 PEIMLNWMHY-NQTVDIWSVGCIMAELLTGR 220
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIP 704
R L ++H S IIHRD+K S++ ++ + E ++ DFGLA+ + + +A + Y
Sbjct: 147 RGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVA--TRWYRA 201
Query: 705 PEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE + D++ G ++ EL+TG+
Sbjct: 202 PEIMLNWMHY-NQTVDIWSVGCIMAELLTGR 231
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIP 704
R L ++H S IIHRD+K S++ ++ + E ++ DFGLA+ + + +A + Y
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA--TRWYRA 190
Query: 705 PEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE + D++ G ++ EL+TG+
Sbjct: 191 PEIMLNWMHY-NQTVDIWSVGCIMAELLTGR 220
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIP 704
R L ++H S IIHRD+K S++ ++ + E ++ DFGLA+ + + +A + Y
Sbjct: 143 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA--TRWYRA 197
Query: 705 PEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE + D++ G ++ EL+TG+
Sbjct: 198 PEIMLNWMHY-NQTVDIWSVGCIMAELLTGR 227
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIP 704
R L ++H S IIHRD+K S++ ++ + E ++ DFGLA+ + + +A + Y
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA--TRWYRA 190
Query: 705 PEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE + D++ G ++ EL+TG+
Sbjct: 191 PEIMLNWMHY-NQTVDIWSVGCIMAELLTGR 220
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIP 704
R L ++H S IIHRD+K S++ ++ + E ++ DFGLA+ + + +A + Y
Sbjct: 156 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA--TRWYRA 210
Query: 705 PEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE + D++ G ++ EL+TG+
Sbjct: 211 PEIMLNWMHY-NQTVDIWSVGCIMAELLTGR 240
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIP 704
R L ++H S IIHRD+K S++ ++ + E ++ DFGLA+ + + +A + Y
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA--TRWYRA 190
Query: 705 PEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE + D++ G ++ EL+TG+
Sbjct: 191 PEIMLNWMHY-NQTVDIWSVGCIMAELLTGR 220
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIP 704
R L ++H S IIHRD+K S++ ++ + E ++ DFGLA+ + + +A + Y
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA--TRWYRA 190
Query: 705 PEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE + D++ G ++ EL+TG+
Sbjct: 191 PEIMLNWMHY-NQTVDIWSVGCIMAELLTGR 220
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 74/197 (37%), Gaps = 43/197 (21%)
Query: 554 ELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXX 613
EL HPN+VP IA ++ + +M G+ ++L+ +
Sbjct: 60 ELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMD------------ 107
Query: 614 XXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMN 673
G L + I G +AL ++HH +HR +KAS + + ++
Sbjct: 108 -----------GMNELAIAY-----ILQGVLKALDYIHHMG---YVHRSVKASHILISVD 148
Query: 674 LEPRLSDFGLAK---IFGNGLDEEIARGSPGY-------IPPEFAQPDSDFPTPKSDVYC 723
+ LS GL + +G + + P Y + PE Q + KSD+Y
Sbjct: 149 GKVYLS--GLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYS 206
Query: 724 YGVVLLELITGKKPLGD 740
G+ EL G P D
Sbjct: 207 VGITACELANGHVPFKD 223
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIP 704
R L ++H S IIHRD+K S++ ++ + E ++ DFGLA+ + + +A + Y
Sbjct: 141 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA--TRWYRA 195
Query: 705 PEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE + D++ G ++ EL+TG+
Sbjct: 196 PEIMLNWMHY-NQTVDIWSVGCIMAELLTGR 225
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIP 704
R L ++H S IIHRD+K S++ ++ + E ++ DFGLA+ + + +A + Y
Sbjct: 156 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA--TRWYRA 210
Query: 705 PEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE + D++ G ++ EL+TG+
Sbjct: 211 PEIMLNWMHY-NQTVDIWSVGCIMAELLTGR 240
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIP 704
R L ++H S IIHRD+K S++ ++ + E ++ DFGLA+ + + +A + Y
Sbjct: 134 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA--TRWYRA 188
Query: 705 PEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE + D++ G ++ EL+TG+
Sbjct: 189 PEIMLNWMHY-NQTVDIWSVGCIMAELLTGR 218
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIP 704
R L ++H S IIHRD+K S++ ++ + E ++ DFGLA+ + + +A + Y
Sbjct: 135 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA--TRWYRA 189
Query: 705 PEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE + D++ G ++ EL+TG+
Sbjct: 190 PEIMLNWMHY-NQTVDIWSVGCIMAELLTGR 219
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 112/304 (36%), Gaps = 59/304 (19%)
Query: 516 LAEGKFGPVYRGFL------PGGIHVAVKVLVHGSTLTDQ-EAARELEYLGRIKHPNLVP 568
L G FG VY G + P + VAVK L + D+ + E + + H N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 569 LTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEG 628
G + R + + M G+L++ L + S
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRE-------------------TRPRPSQPSSLA 139
Query: 629 LLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLS---DFGLAK 685
+L IA G + L H IHRDI A + L R++ DFG+A+
Sbjct: 140 MLDLLHVARDIACG-CQYLEENH------FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 192
Query: 686 IFGNGLDEEIARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT-GKKPLGDD 741
+G +P ++ P++ T K+D + +GV+L E+ + G P
Sbjct: 193 DIYRA--SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP---- 246
Query: 742 YPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSM 801
YP + ++ +V G R +DP GP +I C P RP+
Sbjct: 247 YPSKSNQEVLEFV------TSGGR-MDPPKNCPGP------VYRIMTQCWQHQPEDRPNF 293
Query: 802 QQIV 805
I+
Sbjct: 294 AIIL 297
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIP 704
R L ++H S IIHRD+K S++ ++ + E ++ DFGLA+ + + +A + Y
Sbjct: 146 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA--TRWYRA 200
Query: 705 PEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE + D++ G ++ EL+TG+
Sbjct: 201 PEIMLNWMHY-NQTVDIWSVGCIMAELLTGR 230
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIP 704
R L ++H S IIHRD+K S++ ++ + E ++ DFGLA+ + + +A + Y
Sbjct: 155 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA--TRWYRA 209
Query: 705 PEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE + D++ G ++ EL+TG+
Sbjct: 210 PEIMLNWMHY-NQTVDIWSVGCIMAELLTGR 239
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIP 704
R L ++H S IIHRD+K S++ ++ + E ++ DFGLA+ + + +A + Y
Sbjct: 155 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA--TRWYRA 209
Query: 705 PEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE + D++ G ++ EL+TG+
Sbjct: 210 PEIMLNWMHY-NQTVDIWSVGCIMAELLTGR 239
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 112/304 (36%), Gaps = 59/304 (19%)
Query: 516 LAEGKFGPVYRGFL------PGGIHVAVKVLVHGSTLTDQ-EAARELEYLGRIKHPNLVP 568
L G FG VY G + P + VAVK L + D+ + E + + H N+V
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 569 LTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEG 628
G + R + + M G+L++ L + S
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRE-------------------TRPRPSQPSSLA 165
Query: 629 LLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLS---DFGLAK 685
+L IA G + L H IHRDI A + L R++ DFG+A+
Sbjct: 166 MLDLLHVARDIACG-CQYLEENH------FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 218
Query: 686 IFGNGLDEEIARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT-GKKPLGDD 741
+G +P ++ P++ T K+D + +GV+L E+ + G P
Sbjct: 219 DIYRA--SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP---- 272
Query: 742 YPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSM 801
YP + ++ +V G R +DP GP +I C P RP+
Sbjct: 273 YPSKSNQEVLEFV------TSGGR-MDPPKNCPGP------VYRIMTQCWQHQPEDRPNF 319
Query: 802 QQIV 805
I+
Sbjct: 320 AIIL 323
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 103/253 (40%), Gaps = 48/253 (18%)
Query: 510 FDRGTLLAEGKFGPVYRGFLPG-GIHVAVKVLVHGST------LTDQEAARELEYLGRIK 562
+D G L G+F V + G+ A K + T ++ ++ RE+ L I+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 563 HPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQ 622
HPN++ L I I + + G L + L + + +
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAE-------------------KESLTE 113
Query: 623 NVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYL-DMNL-EPRLS- 679
+E F +I G + +LH S I H D+K ++ L D N+ +PR+
Sbjct: 114 EEATE-------FLKQILNG----VYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 680 -DFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTP-KSDVYCYGVVLLELITGKKP 737
DFGLA G + + G+P ++ PE + P ++D++ GV+ L++G P
Sbjct: 160 IDFGLAHKIDFGNEFKNIFGTPAFVAPEIVNYE---PLGLEADMWSIGVITYILLSGASP 216
Query: 738 LGDDYPEEKEGNL 750
D +E N+
Sbjct: 217 FLGDTKQETLANV 229
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIP 704
R L ++H S IIHRD+K S++ ++ + E ++ DFGLA+ + + +A + Y
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA--TRWYRA 190
Query: 705 PEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE + D++ G ++ EL+TG+
Sbjct: 191 PEIMLNWMHY-NQTVDIWSVGCIMAELLTGR 220
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 102/263 (38%), Gaps = 60/263 (22%)
Query: 554 ELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXX 613
E+E L ++ HP ++ + + A D I + + ME G L +
Sbjct: 65 EIEILKKLNHPCIIKIKNFFDAEDYYI-VLELMEGGELFD-------------------- 103
Query: 614 XXXXXNSIQNVGSEGL--LTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLD 671
+ VG++ L T + +++ L A+ +LH IIHRD+K +V L
Sbjct: 104 --------KVVGNKRLKEATCKLYFYQMLL----AVQYLHEN---GIIHRDLKPENVLLS 148
Query: 672 MNLEP---RLSDFGLAKIFGNGLDEEIARGSPGYIPPE-FAQPDSDFPTPKSDVYCYGVV 727
E +++DFG +KI G G+P Y+ PE + D + GV+
Sbjct: 149 SQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI 208
Query: 728 LLELITGKKPLGD--------DYPEEKEGNLVSWVRGLVRNN-----KGSRAIDPKIRDT 774
L ++G P + D + N + V V K +DPK R T
Sbjct: 209 LFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFT 268
Query: 775 GPEKQMEEALKIGYLCTADLPLK 797
EEAL+ +L D+ K
Sbjct: 269 -----TEEALRHPWLQDEDMKRK 286
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 96/239 (40%), Gaps = 51/239 (21%)
Query: 508 SNFDRGTLLAEGKFGPVY--RGFLPGGIHVAVKVLVHGSTL-TDQEAARELEYLGRIKHP 564
NF + + EG +G VY R L G + K+ + T A RE+ L + HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 565 NLVPLTGYCIAGDQRIAIYDYMENGNLQNL-----LHDLPLGVQXXXXXXXXXXXXXXXN 619
N+V L ++ +++++ +L+ L +PL
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLP------------------ 103
Query: 620 SIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLS 679
L+ ++ F+ + LAF H S ++HRD+K ++ ++ +L+
Sbjct: 104 ---------LIKSYLFQ------LLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLA 145
Query: 680 DFGLAKIFG---NGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
DFGLA+ FG E+ + Y PE + T D++ G + E++T +
Sbjct: 146 DFGLARAFGVPVRTYTHEVV--TLWYRAPEILLGXKYYST-AVDIWSLGCIFAEMVTRR 201
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIP 704
R L ++H S IIHRD+K S++ ++ + E ++ DFGLA+ + + +A + Y
Sbjct: 133 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA--TRWYRA 187
Query: 705 PEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE + D++ G ++ EL+TG+
Sbjct: 188 PEIMLNWMHY-NQTVDIWSVGCIMAELLTGR 217
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 102/263 (38%), Gaps = 60/263 (22%)
Query: 554 ELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXX 613
E+E L ++ HP ++ + + A D I + + ME G L +
Sbjct: 190 EIEILKKLNHPCIIKIKNFFDAEDYYIVL-ELMEGGELFD-------------------- 228
Query: 614 XXXXXNSIQNVGSEGL--LTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLD 671
+ VG++ L T + +++ L A+ +LH IIHRD+K +V L
Sbjct: 229 --------KVVGNKRLKEATCKLYFYQMLL----AVQYLHEN---GIIHRDLKPENVLLS 273
Query: 672 MNLEP---RLSDFGLAKIFGNGLDEEIARGSPGYIPPE-FAQPDSDFPTPKSDVYCYGVV 727
E +++DFG +KI G G+P Y+ PE + D + GV+
Sbjct: 274 SQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI 333
Query: 728 LLELITGKKPLGD--------DYPEEKEGNLVSWVRGLVRNN-----KGSRAIDPKIRDT 774
L ++G P + D + N + V V K +DPK R T
Sbjct: 334 LFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFT 393
Query: 775 GPEKQMEEALKIGYLCTADLPLK 797
EEAL+ +L D+ K
Sbjct: 394 -----TEEALRHPWLQDEDMKRK 411
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIP 704
R L ++H S IIHRD+K S++ ++ + E ++ DFGLA+ + + +A + Y
Sbjct: 132 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA--TRWYRA 186
Query: 705 PEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE + D++ G ++ EL+TG+
Sbjct: 187 PEIMLNWMHY-NQTVDIWSVGCIMAELLTGR 216
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIP 704
R L ++H S IIHRD+K S++ ++ + E ++ DFGLA+ + + +A + Y
Sbjct: 138 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA--TRWYRA 192
Query: 705 PEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE + D++ G ++ EL+TG+
Sbjct: 193 PEIMLNWMHY-NQTVDIWSVGCIMAELLTGR 222
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 102/263 (38%), Gaps = 60/263 (22%)
Query: 554 ELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXX 613
E+E L ++ HP ++ + + A D I + + ME G L +
Sbjct: 65 EIEILKKLNHPCIIKIKNFFDAEDYYI-VLELMEGGELFD-------------------- 103
Query: 614 XXXXXNSIQNVGSEGL--LTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLD 671
+ VG++ L T + +++ L A+ +LH IIHRD+K +V L
Sbjct: 104 --------KVVGNKRLKEATCKLYFYQMLL----AVQYLHEN---GIIHRDLKPENVLLS 148
Query: 672 MNLEP---RLSDFGLAKIFGNGLDEEIARGSPGYIPPE-FAQPDSDFPTPKSDVYCYGVV 727
E +++DFG +KI G G+P Y+ PE + D + GV+
Sbjct: 149 SQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI 208
Query: 728 LLELITGKKPLGD--------DYPEEKEGNLVSWVRGLVRNN-----KGSRAIDPKIRDT 774
L ++G P + D + N + V V K +DPK R T
Sbjct: 209 LFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFT 268
Query: 775 GPEKQMEEALKIGYLCTADLPLK 797
EEAL+ +L D+ K
Sbjct: 269 -----TEEALRHPWLQDEDMKRK 286
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 102/263 (38%), Gaps = 60/263 (22%)
Query: 554 ELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXX 613
E+E L ++ HP ++ + + A D I + + ME G L +
Sbjct: 71 EIEILKKLNHPCIIKIKNFFDAEDYYI-VLELMEGGELFD-------------------- 109
Query: 614 XXXXXNSIQNVGSEGL--LTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLD 671
+ VG++ L T + +++ L A+ +LH IIHRD+K +V L
Sbjct: 110 --------KVVGNKRLKEATCKLYFYQMLL----AVQYLHEN---GIIHRDLKPENVLLS 154
Query: 672 MNLEP---RLSDFGLAKIFGNGLDEEIARGSPGYIPPE-FAQPDSDFPTPKSDVYCYGVV 727
E +++DFG +KI G G+P Y+ PE + D + GV+
Sbjct: 155 SQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI 214
Query: 728 LLELITGKKPLGD--------DYPEEKEGNLVSWVRGLVRNN-----KGSRAIDPKIRDT 774
L ++G P + D + N + V V K +DPK R T
Sbjct: 215 LFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFT 274
Query: 775 GPEKQMEEALKIGYLCTADLPLK 797
EEAL+ +L D+ K
Sbjct: 275 -----TEEALRHPWLQDEDMKRK 292
>pdb|1P9A|G Chain G, Crystal Structure Of N-terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-alpha At 1.7 Angstrom
Resolution
pdb|1QYY|A Chain A, Crystal Structure Of N-Terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-Alpha At 2.8 Angstrom
Resolution
pdb|1QYY|G Chain G, Crystal Structure Of N-Terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-Alpha At 2.8 Angstrom
Resolution
Length = 290
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 61/121 (50%), Gaps = 5/121 (4%)
Query: 50 GKLSKLQSLDLSENNITALPSDLWSLGSLKSLNLSYNRISGSLP-SNIGNFGLLEVFDLS 108
G L L +LDLS N + +LP +L +L L++S+NR++ SLP + G L+ L
Sbjct: 74 GTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLT-SLPLGALRGLGELQELYLK 132
Query: 109 NNNFSGEIPAAISSLVSLRVLKLDGNMFQWSIPPGLLN-CQSLVTVDLSMNQLNGSLPDG 167
N P ++ L L L N +P GLLN ++L T+ L N L ++P G
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNNLT-ELPAGLLNGLENLDTLLLQENSLY-TIPKG 190
Query: 168 F 168
F
Sbjct: 191 F 191
Score = 35.8 bits (81), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 61/138 (44%), Gaps = 27/138 (19%)
Query: 48 TIGKLSKLQSLDLSENNITALPSDLWSLGSLKSLNLSYNRISGSLPSNIGNFGLLEVFDL 107
T+ ++L L+L +T L D +L L +L+LS+N++ SLP L V D+
Sbjct: 50 TLMPYTRLTQLNLDRAELTKLQVD-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDV 107
Query: 108 SNNNFSGEIPAAISSLVSLRVLKLDGNMFQWSIPPGLLNCQSLVTVDLSMNQLNGSLPDG 167
S N + A+ L L+ L L GN + ++PPGLL
Sbjct: 108 SFNRLTSLPLGALRGLGELQELYLKGNELK-TLPPGLL---------------------- 144
Query: 168 FGAAFPKLKSLNLAGNEI 185
PKL+ L+LA N +
Sbjct: 145 --TPTPKLEKLSLANNNL 160
Score = 29.6 bits (65), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 68/170 (40%), Gaps = 42/170 (24%)
Query: 257 QLSGEIFHNFSQAQNLKHLSLAYNRFTRQEFPQI---GTLLGLEHLNLSRTSLIGDIPSE 313
LS + + FS A + + L R E ++ GTL L L+LS L +P
Sbjct: 37 HLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVDGTLPVLGTLDLSHNQL-QSLPLL 95
Query: 314 ILQLSSLHTLDLSMNHLTGQIPTVSAKNLG---------------------------IID 346
L +L LD+S N LT +P + + LG +
Sbjct: 96 GQTLPALTVLDVSFNRLTS-LPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLS 154
Query: 347 MSHNNLSGEIPASLLEKLPQMERFNFSYNNLTLCASELSPETLQTAFFGS 396
+++NNL+ E+PA LL L ++ TL E S T+ FFGS
Sbjct: 155 LANNNLT-ELPAGLLNGLENLD---------TLLLQENSLYTIPKGFFGS 194
Score = 29.3 bits (64), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 286 EFPQIGTLLGLEHLNLSRTSLIGDIPSEILQLSSLHTLDLSMNHLTGQIPTVSAKNLGII 345
+ P+ T+L L L SL +P L +L +L+ + G +P LG +
Sbjct: 28 DLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVDGTLPV-----LGTL 82
Query: 346 DMSHNNLSGEIPASLLEKLPQMERFNFSYNNLT 378
D+SHN L +P L + LP + + S+N LT
Sbjct: 83 DLSHNQLQS-LPL-LGQTLPALTVLDVSFNRLT 113
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIP 704
R L ++H S IIHRD+K S++ ++ + E ++ DFGLA+ + + +A + Y
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVA--TRWYRA 190
Query: 705 PEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE + D++ G ++ EL+TG+
Sbjct: 191 PEIMLNWMHY-NQTVDIWSVGCIMAELLTGR 220
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIP 704
R L ++H S IIHRD+K S++ ++ + E ++ DFGLA+ + + +A + Y
Sbjct: 141 RGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVA--TRWYRA 195
Query: 705 PEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE + D++ G ++ EL+TG+
Sbjct: 196 PEIMLNWMHY-NQTVDIWSVGCIMAELLTGR 225
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIP 704
R L ++H S IIHRD+K S++ ++ + E ++ DFGLA+ + + +A + Y
Sbjct: 133 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA--TRWYRA 187
Query: 705 PEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE + D++ G ++ EL+TG+
Sbjct: 188 PEIMLNWMHY-NQTVDIWSVGCIMAELLTGR 217
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 112/304 (36%), Gaps = 59/304 (19%)
Query: 516 LAEGKFGPVYRGFL------PGGIHVAVKVLVHGSTLTDQ-EAARELEYLGRIKHPNLVP 568
L G FG VY G + P + VAVK L + D+ + E + + H N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 569 LTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEG 628
G + R + + M G+L++ L + S
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRE-------------------TRPRPSQPSSLA 153
Query: 629 LLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLS---DFGLAK 685
+L IA G + L H IHRDI A + L R++ DFG+A+
Sbjct: 154 MLDLLHVARDIACG-CQYLEENH------FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
Query: 686 IFGNGLDEEIARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT-GKKPLGDD 741
+G +P ++ P++ T K+D + +GV+L E+ + G P
Sbjct: 207 DIYRA--SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP---- 260
Query: 742 YPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSM 801
YP + ++ +V G R +DP GP +I C P RP+
Sbjct: 261 YPSKSNQEVLEFV------TSGGR-MDPPKNCPGP------VYRIMTQCWQHQPEDRPNF 307
Query: 802 QQIV 805
I+
Sbjct: 308 AIIL 311
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 99/243 (40%), Gaps = 51/243 (20%)
Query: 504 LSATSNFDRGTLLAEGKFGPVY--RGFLPGGIHVAVKVLVHGSTL-TDQEAARELEYLGR 560
L + NF + + EG +G VY R L G + K+ + T A RE+ L
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 561 IKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNL-----LHDLPLGVQXXXXXXXXXXXX 615
+ HPN+V L ++ +++++ + +L+ L +PL
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLP-------------- 106
Query: 616 XXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLE 675
L+ ++ F+ + LAF H S ++HRD+K ++ ++
Sbjct: 107 -------------LIKSYLFQ------LLQGLAFCH---SHRVLHRDLKPENLLINTEGA 144
Query: 676 PRLSDFGLAKIFG---NGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELI 732
+L+DFGLA+ FG E+ + Y PE + T D++ G + E++
Sbjct: 145 IKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYST-AVDIWSLGCIFAEMV 201
Query: 733 TGK 735
T +
Sbjct: 202 TRR 204
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIP 704
R L ++H S IIHRD+K S++ ++ + E ++ DFGLA+ + + +A + Y
Sbjct: 141 RGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVA--TRWYRA 195
Query: 705 PEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE + D++ G ++ EL+TG+
Sbjct: 196 PEIMLNWMHY-NQTVDIWSVGCIMAELLTGR 225
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 102/263 (38%), Gaps = 60/263 (22%)
Query: 554 ELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXX 613
E+E L ++ HP ++ + + A D I + + ME G L +
Sbjct: 65 EIEILKKLNHPCIIKIKNFFDAEDYYI-VLELMEGGELFD-------------------- 103
Query: 614 XXXXXNSIQNVGSEGL--LTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLD 671
+ VG++ L T + +++ L A+ +LH IIHRD+K +V L
Sbjct: 104 --------KVVGNKRLKEATCKLYFYQMLL----AVQYLHEN---GIIHRDLKPENVLLS 148
Query: 672 MNLEP---RLSDFGLAKIFGNGLDEEIARGSPGYIPPE-FAQPDSDFPTPKSDVYCYGVV 727
E +++DFG +KI G G+P Y+ PE + D + GV+
Sbjct: 149 SQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI 208
Query: 728 LLELITGKKPLGD--------DYPEEKEGNLVSWVRGLVRNN-----KGSRAIDPKIRDT 774
L ++G P + D + N + V V K +DPK R T
Sbjct: 209 LFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFT 268
Query: 775 GPEKQMEEALKIGYLCTADLPLK 797
EEAL+ +L D+ K
Sbjct: 269 -----TEEALRHPWLQDEDMKRK 286
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 97/241 (40%), Gaps = 51/241 (21%)
Query: 506 ATSNFDRGTLLAEGKFGPVY--RGFLPGGIHVAVKVLVHGSTL-TDQEAARELEYLGRIK 562
+ NF + + EG +G VY R L G + K+ + T A RE+ L +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 563 HPNLVPLTGYCIAGDQRIAIYDYMENGNLQNL-----LHDLPLGVQXXXXXXXXXXXXXX 617
HPN+V L ++ +++++ +L+ L +PL
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLP---------------- 103
Query: 618 XNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPR 677
L+ ++ F+ + LAF H S ++HRD+K ++ ++ +
Sbjct: 104 -----------LIKSYLFQ------LLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIK 143
Query: 678 LSDFGLAKIFG---NGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITG 734
L+DFGLA+ FG E+ + Y PE + T D++ G + E++T
Sbjct: 144 LADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYST-AVDIWSLGCIFAEMVTR 200
Query: 735 K 735
+
Sbjct: 201 R 201
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIP 704
R L ++H S IIHRD+K S++ ++ + E ++ DFGLA+ + + +A + Y
Sbjct: 132 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA--TRWYRA 186
Query: 705 PEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE + D++ G ++ EL+TG+
Sbjct: 187 PEIMLNWMHY-NQTVDIWSVGCIMAELLTGR 216
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 112/304 (36%), Gaps = 59/304 (19%)
Query: 516 LAEGKFGPVYRGFL------PGGIHVAVKVLVHGSTLTDQ-EAARELEYLGRIKHPNLVP 568
L G FG VY G + P + VAVK L + D+ + E + + H N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 569 LTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEG 628
G + R + + M G+L++ L + S
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRE-------------------TRPRPSQPSSLA 139
Query: 629 LLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLS---DFGLAK 685
+L IA G + L H IHRDI A + L R++ DFG+A+
Sbjct: 140 MLDLLHVARDIACG-CQYLEENH------FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQ 192
Query: 686 IFGNGLDEEIARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT-GKKPLGDD 741
+G +P ++ P++ T K+D + +GV+L E+ + G P
Sbjct: 193 DIYRA--SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP---- 246
Query: 742 YPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSM 801
YP + ++ +V G R +DP GP +I C P RP+
Sbjct: 247 YPSKSNQEVLEFV------TSGGR-MDPPKNCPGP------VYRIMTQCWQHQPEDRPNF 293
Query: 802 QQIV 805
I+
Sbjct: 294 AIIL 297
>pdb|3PMH|G Chain G, Mechanism Of Sulfotyrosine-Mediated Glycoprotein Ib
Interaction With Two Distinct Alpha-Thrombin Sites
Length = 290
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 61/121 (50%), Gaps = 5/121 (4%)
Query: 50 GKLSKLQSLDLSENNITALPSDLWSLGSLKSLNLSYNRISGSLP-SNIGNFGLLEVFDLS 108
G L L +LDLS N + +LP +L +L L++S+NR++ SLP + G L+ L
Sbjct: 74 GTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLT-SLPLGALRGLGELQELYLK 132
Query: 109 NNNFSGEIPAAISSLVSLRVLKLDGNMFQWSIPPGLLN-CQSLVTVDLSMNQLNGSLPDG 167
N P ++ L L L N +P GLLN ++L T+ L N L ++P G
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNNLT-ELPAGLLNGLENLDTLLLQENSLY-TIPKG 190
Query: 168 F 168
F
Sbjct: 191 F 191
Score = 35.8 bits (81), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 61/138 (44%), Gaps = 27/138 (19%)
Query: 48 TIGKLSKLQSLDLSENNITALPSDLWSLGSLKSLNLSYNRISGSLPSNIGNFGLLEVFDL 107
T+ ++L L+L +T L D +L L +L+LS+N++ SLP L V D+
Sbjct: 50 TLMPYTRLTQLNLDRAELTKLQVD-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDV 107
Query: 108 SNNNFSGEIPAAISSLVSLRVLKLDGNMFQWSIPPGLLNCQSLVTVDLSMNQLNGSLPDG 167
S N + A+ L L+ L L GN + ++PPGLL
Sbjct: 108 SFNRLTSLPLGALRGLGELQELYLKGNELK-TLPPGLL---------------------- 144
Query: 168 FGAAFPKLKSLNLAGNEI 185
PKL+ L+LA N +
Sbjct: 145 --TPTPKLEKLSLANNNL 160
Score = 29.6 bits (65), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 68/170 (40%), Gaps = 42/170 (24%)
Query: 257 QLSGEIFHNFSQAQNLKHLSLAYNRFTRQEFPQI---GTLLGLEHLNLSRTSLIGDIPSE 313
LS + + FS A + + L R E ++ GTL L L+LS L +P
Sbjct: 37 HLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVDGTLPVLGTLDLSHNQL-QSLPLL 95
Query: 314 ILQLSSLHTLDLSMNHLTGQIPTVSAKNLG---------------------------IID 346
L +L LD+S N LT +P + + LG +
Sbjct: 96 GQTLPALTVLDVSFNRLTS-LPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLS 154
Query: 347 MSHNNLSGEIPASLLEKLPQMERFNFSYNNLTLCASELSPETLQTAFFGS 396
+++NNL+ E+PA LL L ++ TL E S T+ FFGS
Sbjct: 155 LANNNLT-ELPAGLLNGLENLD---------TLLLQENSLYTIPKGFFGS 194
Score = 29.3 bits (64), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 286 EFPQIGTLLGLEHLNLSRTSLIGDIPSEILQLSSLHTLDLSMNHLTGQIPTVSAKNLGII 345
+ P+ T+L L L SL +P L +L +L+ + G +P LG +
Sbjct: 28 DLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVDGTLPV-----LGTL 82
Query: 346 DMSHNNLSGEIPASLLEKLPQMERFNFSYNNLT 378
D+SHN L +P L + LP + + S+N LT
Sbjct: 83 DLSHNQLQS-LPL-LGQTLPALTVLDVSFNRLT 113
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIP 704
R L ++H S IIHRD+K S++ ++ + E ++ DFGLA+ + + +A + Y
Sbjct: 132 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA--TRWYRA 186
Query: 705 PEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE + D++ G ++ EL+TG+
Sbjct: 187 PEIMLNWMHY-NQTVDIWSVGCIMAELLTGR 216
>pdb|1OOK|G Chain G, Crystal Structure Of The Complex Of Platelet Receptor
Gpib-alpha And Human Alpha-thrombin
Length = 290
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 61/121 (50%), Gaps = 5/121 (4%)
Query: 50 GKLSKLQSLDLSENNITALPSDLWSLGSLKSLNLSYNRISGSLP-SNIGNFGLLEVFDLS 108
G L L +LDLS N + +LP +L +L L++S+NR++ SLP + G L+ L
Sbjct: 74 GTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLT-SLPLGALRGLGELQELYLK 132
Query: 109 NNNFSGEIPAAISSLVSLRVLKLDGNMFQWSIPPGLLN-CQSLVTVDLSMNQLNGSLPDG 167
N P ++ L L L N +P GLLN ++L T+ L N L ++P G
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNNLT-ELPAGLLNGLENLDTLLLQENSLY-TIPKG 190
Query: 168 F 168
F
Sbjct: 191 F 191
Score = 35.8 bits (81), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 61/138 (44%), Gaps = 27/138 (19%)
Query: 48 TIGKLSKLQSLDLSENNITALPSDLWSLGSLKSLNLSYNRISGSLPSNIGNFGLLEVFDL 107
T+ ++L L+L +T L D +L L +L+LS+N++ SLP L V D+
Sbjct: 50 TLMPYTRLTQLNLDRAELTKLQVD-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDV 107
Query: 108 SNNNFSGEIPAAISSLVSLRVLKLDGNMFQWSIPPGLLNCQSLVTVDLSMNQLNGSLPDG 167
S N + A+ L L+ L L GN + ++PPGLL
Sbjct: 108 SFNRLTSLPLGALRGLGELQELYLKGNELK-TLPPGLL---------------------- 144
Query: 168 FGAAFPKLKSLNLAGNEI 185
PKL+ L+LA N +
Sbjct: 145 --TPTPKLEKLSLANNNL 160
Score = 29.6 bits (65), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 68/170 (40%), Gaps = 42/170 (24%)
Query: 257 QLSGEIFHNFSQAQNLKHLSLAYNRFTRQEFPQI---GTLLGLEHLNLSRTSLIGDIPSE 313
LS + + FS A + + L R E ++ GTL L L+LS L +P
Sbjct: 37 HLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVDGTLPVLGTLDLSHNQL-QSLPLL 95
Query: 314 ILQLSSLHTLDLSMNHLTGQIPTVSAKNLG---------------------------IID 346
L +L LD+S N LT +P + + LG +
Sbjct: 96 GQTLPALTVLDVSFNRLTS-LPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLS 154
Query: 347 MSHNNLSGEIPASLLEKLPQMERFNFSYNNLTLCASELSPETLQTAFFGS 396
+++NNL+ E+PA LL L ++ TL E S T+ FFGS
Sbjct: 155 LANNNLT-ELPAGLLNGLENLD---------TLLLQENSLYTIPKGFFGS 194
Score = 29.3 bits (64), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 286 EFPQIGTLLGLEHLNLSRTSLIGDIPSEILQLSSLHTLDLSMNHLTGQIPTVSAKNLGII 345
+ P+ T+L L L SL +P L +L +L+ + G +P LG +
Sbjct: 28 DLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVDGTLPV-----LGTL 82
Query: 346 DMSHNNLSGEIPASLLEKLPQMERFNFSYNNLT 378
D+SHN L +P L + LP + + S+N LT
Sbjct: 83 DLSHNQLQS-LPL-LGQTLPALTVLDVSFNRLT 113
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 96/239 (40%), Gaps = 51/239 (21%)
Query: 508 SNFDRGTLLAEGKFGPVY--RGFLPGGIHVAVKVLVHGSTL-TDQEAARELEYLGRIKHP 564
NF + + EG +G VY R L G + K+ + T A RE+ L + HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 565 NLVPLTGYCIAGDQRIAIYDYMENGNLQNL-----LHDLPLGVQXXXXXXXXXXXXXXXN 619
N+V L ++ +++++ +L+ L +PL
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLP------------------ 103
Query: 620 SIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLS 679
L+ ++ F+ + LAF H S ++HRD+K ++ ++ +L+
Sbjct: 104 ---------LIKSYLFQ------LLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLA 145
Query: 680 DFGLAKIFG---NGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
DFGLA+ FG E+ + Y PE + T D++ G + E++T +
Sbjct: 146 DFGLARAFGVPVRTYTHEVV--TLWYRAPEILLGCKYYST-AVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 96/239 (40%), Gaps = 51/239 (21%)
Query: 508 SNFDRGTLLAEGKFGPVY--RGFLPGGIHVAVKVLVHGSTL-TDQEAARELEYLGRIKHP 564
NF + + EG +G VY R L G + K+ + T A RE+ L + HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 565 NLVPLTGYCIAGDQRIAIYDYMENGNLQNL-----LHDLPLGVQXXXXXXXXXXXXXXXN 619
N+V L ++ +++++ +L+ L +PL
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLP------------------ 102
Query: 620 SIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLS 679
L+ ++ F+ + LAF H S ++HRD+K ++ ++ +L+
Sbjct: 103 ---------LIKSYLFQ------LLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLA 144
Query: 680 DFGLAKIFG---NGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
DFGLA+ FG E+ + Y PE + T D++ G + E++T +
Sbjct: 145 DFGLARAFGVPVRTYTHEVV--TLWYRAPEILLGCKYYST-AVDIWSLGCIFAEMVTRR 200
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 658 IIHRDIKASSVYLDMNLE---PRLSDFGLA-KIFGNGLDEEIARGSPGYIPPEFAQPDSD 713
++HR++K ++ L L+ +L+DFGLA ++ G G+PGY+ PE + D
Sbjct: 131 VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDP- 189
Query: 714 FPTPKSDVYCYGVVLLELITGKKPLGDD 741
+ P D++ GV+L L+ G P D+
Sbjct: 190 YGKP-VDLWACGVILYILLVGYPPFWDE 216
>pdb|1SQ0|B Chain B, Crystal Structure Of The Complex Of The Wild-Type Von
Willebrand Factor A1 Domain And Glycoprotein Ib Alpha At
2.6 Angstrom Resolution
Length = 288
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 61/121 (50%), Gaps = 5/121 (4%)
Query: 50 GKLSKLQSLDLSENNITALPSDLWSLGSLKSLNLSYNRISGSLP-SNIGNFGLLEVFDLS 108
G L L +LDLS N + +LP +L +L L++S+NR++ SLP + G L+ L
Sbjct: 74 GTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLT-SLPLGALRGLGELQELYLK 132
Query: 109 NNNFSGEIPAAISSLVSLRVLKLDGNMFQWSIPPGLLN-CQSLVTVDLSMNQLNGSLPDG 167
N P ++ L L L N +P GLLN ++L T+ L N L ++P G
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNDLT-ELPAGLLNGLENLDTLLLQENSLY-TIPKG 190
Query: 168 F 168
F
Sbjct: 191 F 191
Score = 37.0 bits (84), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 62/138 (44%), Gaps = 27/138 (19%)
Query: 48 TIGKLSKLQSLDLSENNITALPSDLWSLGSLKSLNLSYNRISGSLPSNIGNFGLLEVFDL 107
T+ ++L L+L +T L D +L L +L+LS+N++ SLP L V D+
Sbjct: 50 TLMPYTRLTQLNLDRCELTKLQVD-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDV 107
Query: 108 SNNNFSGEIPAAISSLVSLRVLKLDGNMFQWSIPPGLLNCQSLVTVDLSMNQLNGSLPDG 167
S N + A+ L L+ L L GN + ++PPGLL
Sbjct: 108 SFNRLTSLPLGALRGLGELQELYLKGNELK-TLPPGLL---------------------- 144
Query: 168 FGAAFPKLKSLNLAGNEI 185
PKL+ L+LA N++
Sbjct: 145 --TPTPKLEKLSLANNDL 160
Score = 30.0 bits (66), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 12/145 (8%)
Query: 45 PDTTIGKLSKLQSLDLSENNITALPSDLWSLGSLKSL--NLSYN-RISGSLPSNIGNFGL 101
P + K++ ++ + ++TALP DL ++ L NL Y ++ +P
Sbjct: 2 PICEVSKVASHLEVNCDKRDLTALPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQLN 61
Query: 102 LEVFDLSNNNFSGEIPAAISSLVSLRVLKLDGNMFQWSIPPGLLNCQSLVTVDLSMNQLN 161
L+ +L+ G +P L L L N Q S+P +L +D+S N+L
Sbjct: 62 LDRCELTKLQVDGTLPV-------LGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLT 113
Query: 162 GSLPDGFGAAFPKLKSLNLAGNEIK 186
SLP G +L+ L L GNE+K
Sbjct: 114 -SLPLGALRGLGELQELYLKGNELK 137
Score = 29.6 bits (65), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 286 EFPQIGTLLGLEHLNLSRTSLIGDIPSEILQLSSLHTLDLSMNHLTGQIPTVSAKNLGII 345
+ P+ T+L L L SL +P L +L +L+ + G +P LG +
Sbjct: 28 DLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRCELTKLQVDGTLPV-----LGTL 82
Query: 346 DMSHNNLSGEIPASLLEKLPQMERFNFSYNNLT 378
D+SHN L +P L + LP + + S+N LT
Sbjct: 83 DLSHNQLQS-LPL-LGQTLPALTVLDVSFNRLT 113
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 98/241 (40%), Gaps = 51/241 (21%)
Query: 506 ATSNFDRGTLLAEGKFGPVY--RGFLPGGIHVAVKVLVHGSTL-TDQEAARELEYLGRIK 562
+ NF + + EG +G VY R L G + K+ + T A RE+ L +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 563 HPNLVPLTGYCIAGDQRIAIYDYMENGNLQNL-----LHDLPLGVQXXXXXXXXXXXXXX 617
HPN+V L ++ +++++ +L++ L +PL
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKDFMDASALTGIPLP---------------- 103
Query: 618 XNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPR 677
L+ ++ F+ + LAF H S ++HRD+K ++ ++ +
Sbjct: 104 -----------LIKSYLFQ------LLQGLAFCH---SHRVLHRDLKPENLLINTEGAIK 143
Query: 678 LSDFGLAKIFG---NGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITG 734
L+DFGLA+ FG E+ + Y PE + T D++ G + E++T
Sbjct: 144 LADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYST-AVDIWSLGCIFAEMVTR 200
Query: 735 K 735
+
Sbjct: 201 R 201
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 102/263 (38%), Gaps = 60/263 (22%)
Query: 554 ELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXX 613
E+E L ++ HP ++ + + A D I + + ME G L +
Sbjct: 64 EIEILKKLNHPCIIKIKNFFDAEDYYI-VLELMEGGELFD-------------------- 102
Query: 614 XXXXXNSIQNVGSEGL--LTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLD 671
+ VG++ L T + +++ L A+ +LH IIHRD+K +V L
Sbjct: 103 --------KVVGNKRLKEATCKLYFYQMLL----AVQYLHEN---GIIHRDLKPENVLLS 147
Query: 672 MNLEP---RLSDFGLAKIFGNGLDEEIARGSPGYIPPE-FAQPDSDFPTPKSDVYCYGVV 727
E +++DFG +KI G G+P Y+ PE + D + GV+
Sbjct: 148 SQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI 207
Query: 728 LLELITGKKPLGD--------DYPEEKEGNLVSWVRGLVRNN-----KGSRAIDPKIRDT 774
L ++G P + D + N + V V K +DPK R T
Sbjct: 208 LFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFT 267
Query: 775 GPEKQMEEALKIGYLCTADLPLK 797
EEAL+ +L D+ K
Sbjct: 268 -----TEEALRHPWLQDEDMKRK 285
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 112/304 (36%), Gaps = 59/304 (19%)
Query: 516 LAEGKFGPVYRGFL------PGGIHVAVKVLVHGSTLTDQ-EAARELEYLGRIKHPNLVP 568
L G FG VY G + P + VAVK L + D+ + E + + H N+V
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 569 LTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEG 628
G + R + + M G+L++ L + S
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRE-------------------TRPRPSQPSSLA 130
Query: 629 LLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLS---DFGLAK 685
+L IA G + L H IHRDI A + L R++ DFG+A+
Sbjct: 131 MLDLLHVARDIACG-CQYLEENH------FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 183
Query: 686 IFGNGLDEEIARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT-GKKPLGDD 741
+G +P ++ P++ T K+D + +GV+L E+ + G P
Sbjct: 184 DIYRA--SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP---- 237
Query: 742 YPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSM 801
YP + ++ +V G R +DP GP +I C P RP+
Sbjct: 238 YPSKSNQEVLEFV------TSGGR-MDPPKNCPGP------VYRIMTQCWQHQPEDRPNF 284
Query: 802 QQIV 805
I+
Sbjct: 285 AIIL 288
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 60/138 (43%), Gaps = 29/138 (21%)
Query: 644 ARALAFLHHGCSPPIIHRDIKASSVYLDM-------------NLEPRLSDFGLAKIFGNG 690
A +A LH S IIHRD+K ++ + NL +SDFGL K +G
Sbjct: 125 ASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG 181
Query: 691 -----LDEEIARGSPGYIPPEFAQPDSDFPTPKS-----DVYCYGVVLLELIT-GKKPLG 739
+ G+ G+ PE + ++ T + D++ G V +++ GK P G
Sbjct: 182 QSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFG 241
Query: 740 DDYPEEKEGNLVSWVRGL 757
D Y +E N++ + L
Sbjct: 242 DKY--SRESNIIRGIFSL 257
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 112/304 (36%), Gaps = 59/304 (19%)
Query: 516 LAEGKFGPVYRGFL------PGGIHVAVKVLVHGSTLTDQ-EAARELEYLGRIKHPNLVP 568
L G FG VY G + P + VAVK L + D+ + E + + H N+V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 569 LTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEG 628
G + R + + M G+L++ L + S
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRE-------------------TRPRPSQPSSLA 138
Query: 629 LLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLS---DFGLAK 685
+L IA G + L H IHRDI A + L R++ DFG+A+
Sbjct: 139 MLDLLHVARDIACG-CQYLEENH------FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 191
Query: 686 IFGNGLDEEIARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT-GKKPLGDD 741
+G +P ++ P++ T K+D + +GV+L E+ + G P
Sbjct: 192 DIYRA--SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP---- 245
Query: 742 YPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSM 801
YP + ++ +V G R +DP GP +I C P RP+
Sbjct: 246 YPSKSNQEVLEFV------TSGGR-MDPPKNCPGP------VYRIMTQCWQHQPEDRPNF 292
Query: 802 QQIV 805
I+
Sbjct: 293 AIIL 296
>pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
pdb|3FXI|B Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
Length = 605
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 82/188 (43%), Gaps = 35/188 (18%)
Query: 195 LKSITNLNISGNLFQGSVMGVFLESLEVIDLRSN--QFQGHISQVQFNSSYNWSRLVYVD 252
LKS+ L + N + V L SLE +DL N F+G SQ S + + L Y+D
Sbjct: 324 LKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQ----SDFGTTSLKYLD 379
Query: 253 LSENQLSGEIFHNFSQAQNLKHLSLAYNRFTRQ-EFPQIGTLLGLEHLNLSRT------- 304
LS N + + NF + L+HL ++ + EF +L L +L++S T
Sbjct: 380 LSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFN 438
Query: 305 ------------SLIGD------IPSEILQLSSLHTLDLSMNHLTGQIPTV--SAKNLGI 344
+ G+ +P +L +L LDLS L PT S +L +
Sbjct: 439 GIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQV 498
Query: 345 IDMSHNNL 352
++MSHNN
Sbjct: 499 LNMSHNNF 506
Score = 36.2 bits (82), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 62 ENNITALPSDLWSLGSLKSLNLSYNRISGSLPSNIGNFGLLEVFDLSNNNFSGEIPAAIS 121
E N +P +L S K+L+LS+N + + +F L+V DLS A
Sbjct: 16 ELNFYKIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQ 73
Query: 122 SLVSLRVLKLDGNMFQ---WSIPPGLLNCQSLVTVDLSMNQLNGSLPDGFGAAFPKLKSL 178
SL L L L GN Q GL + Q LV V+ ++ L + P G LK L
Sbjct: 74 SLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLE-NFPIG---HLKTLKEL 129
Query: 179 NLAGNEIKGRD--THFAGLKSITNLNISGNLFQG 210
N+A N I+ +F+ L ++ +L++S N Q
Sbjct: 130 NVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 163
Score = 33.1 bits (74), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 67/140 (47%), Gaps = 6/140 (4%)
Query: 192 FAGLKSITNLNISGNLFQGSVMGVF--LESLEVIDLRSNQFQGHISQVQFNSSYNWSRLV 249
F L+++ L+IS + + G+F L SLEV+ + N FQ + F N L
Sbjct: 417 FLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRN---LT 473
Query: 250 YVDLSENQLSGEIFHNFSQAQNLKHLSLAYNRFTRQEFPQIGTLLGLEHLNLSRTSLIGD 309
++DLS+ QL F+ +L+ L++++N F + L L+ L+ S ++
Sbjct: 474 FLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTS 533
Query: 310 IPSEILQL-SSLHTLDLSMN 328
E+ SSL L+L+ N
Sbjct: 534 KKQELQHFPSSLAFLNLTQN 553
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 64/153 (41%), Gaps = 6/153 (3%)
Query: 52 LSKLQSLDLSENNITALPSDLWS-LGSLKSLNLSYNRISGS-LPSNIGNFGLLEVFDLSN 109
L L LD+S + + +++ L SL+ L ++ N + LP L DLS
Sbjct: 420 LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQ 479
Query: 110 NNFSGEIPAAISSLVSLRVLKLDGNMFQW--SIPPGLLNCQSLVTVDLSMNQLNGSLPDG 167
P A +SL SL+VL + N F + P LN SL +D S+N + S
Sbjct: 480 CQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLN--SLQVLDYSLNHIMTSKKQE 537
Query: 168 FGAAFPKLKSLNLAGNEIKGRDTHFAGLKSITN 200
L LNL N+ H + L+ I +
Sbjct: 538 LQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKD 570
Score = 29.6 bits (65), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 64/140 (45%), Gaps = 23/140 (16%)
Query: 153 VDLSMNQLNGSLPDGFGAAFPKLKSLNLAGNEIKG-RDTHFAGLKSITNLNISGNLFQGS 211
+DLS N L F +FP+L+ L+L+ EI+ D + L ++ L ++GN Q
Sbjct: 33 LDLSFNPLRHLGSYSF-FSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSL 91
Query: 212 VMGVF-----LESLEVIDLRSNQFQ----GHISQV-QFNSSYNWSRLVYVDLSENQLSGE 261
+G F L+ L ++ + GH+ + + N ++N + S +
Sbjct: 92 ALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQ-----------SFK 140
Query: 262 IFHNFSQAQNLKHLSLAYNR 281
+ FS NL+HL L+ N+
Sbjct: 141 LPEYFSNLTNLEHLDLSSNK 160
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 60/138 (43%), Gaps = 29/138 (21%)
Query: 644 ARALAFLHHGCSPPIIHRDIKASSVYLDM-------------NLEPRLSDFGLAKIFGNG 690
A +A LH S IIHRD+K ++ + NL +SDFGL K +G
Sbjct: 125 ASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG 181
Query: 691 -----LDEEIARGSPGYIPPEFAQPDSDFPTPKS-----DVYCYGVVLLELIT-GKKPLG 739
+ G+ G+ PE + ++ T + D++ G V +++ GK P G
Sbjct: 182 QXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFG 241
Query: 740 DDYPEEKEGNLVSWVRGL 757
D Y +E N++ + L
Sbjct: 242 DKY--SRESNIIRGIFSL 257
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 97/241 (40%), Gaps = 51/241 (21%)
Query: 506 ATSNFDRGTLLAEGKFGPVY--RGFLPGGIHVAVKVLVHGSTL-TDQEAARELEYLGRIK 562
+ NF + + EG +G VY R L G + K+ + T A RE+ L +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 563 HPNLVPLTGYCIAGDQRIAIYDYMENGNLQNL-----LHDLPLGVQXXXXXXXXXXXXXX 617
HPN+V L ++ +++++ +L+ L +PL
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLP---------------- 104
Query: 618 XNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPR 677
L+ ++ F+ + LAF H S ++HRD+K ++ ++ +
Sbjct: 105 -----------LIKSYLFQ------LLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIK 144
Query: 678 LSDFGLAKIFG---NGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITG 734
L+DFGLA+ FG E+ + Y PE + T D++ G + E++T
Sbjct: 145 LADFGLARAFGVPVRTYTHEVV--TLWYRAPEILLGCKYYST-AVDIWSLGCIFAEMVTR 201
Query: 735 K 735
+
Sbjct: 202 R 202
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 112/304 (36%), Gaps = 59/304 (19%)
Query: 516 LAEGKFGPVYRGFL------PGGIHVAVKVLVHGSTLTDQ-EAARELEYLGRIKHPNLVP 568
L G FG VY G + P + VAVK L + D+ + E + + H N+V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 569 LTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEG 628
G + R + + M G+L++ L + S
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRE-------------------TRPRPSQPSSLA 138
Query: 629 LLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLS---DFGLAK 685
+L IA G + L H IHRDI A + L R++ DFG+A+
Sbjct: 139 MLDLLHVARDIACG-CQYLEENH------FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 191
Query: 686 IFGNGLDEEIARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT-GKKPLGDD 741
+G +P ++ P++ T K+D + +GV+L E+ + G P
Sbjct: 192 DIYRA--SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP---- 245
Query: 742 YPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSM 801
YP + ++ +V G R +DP GP +I C P RP+
Sbjct: 246 YPSKSNQEVLEFV------TSGGR-MDPPKNCPGP------VYRIMTQCWQHQPEDRPNF 292
Query: 802 QQIV 805
I+
Sbjct: 293 AIIL 296
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 97/241 (40%), Gaps = 51/241 (21%)
Query: 506 ATSNFDRGTLLAEGKFGPVY--RGFLPGGIHVAVKVLVHGSTL-TDQEAARELEYLGRIK 562
+ NF + + EG +G VY R L G + K+ + T A RE+ L +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 563 HPNLVPLTGYCIAGDQRIAIYDYMENGNLQNL-----LHDLPLGVQXXXXXXXXXXXXXX 617
HPN+V L ++ +++++ +L+ L +PL
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLP---------------- 103
Query: 618 XNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPR 677
L+ ++ F+ + LAF H S ++HRD+K ++ ++ +
Sbjct: 104 -----------LIKSYLFQ------LLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIK 143
Query: 678 LSDFGLAKIFG---NGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITG 734
L+DFGLA+ FG E+ + Y PE + T D++ G + E++T
Sbjct: 144 LADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYST-AVDIWSLGCIFAEMVTR 200
Query: 735 K 735
+
Sbjct: 201 R 201
>pdb|1P8V|A Chain A, Crystal Structure Of The Complex Of Platelet Receptor
Gpib-alpha And Alpha-thrombin At 2.6a
Length = 279
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 61/121 (50%), Gaps = 5/121 (4%)
Query: 50 GKLSKLQSLDLSENNITALPSDLWSLGSLKSLNLSYNRISGSLP-SNIGNFGLLEVFDLS 108
G L L +LDLS N + +LP +L +L L++S+NR++ SLP + G L+ L
Sbjct: 74 GTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLT-SLPLGALRGLGELQELYLK 132
Query: 109 NNNFSGEIPAAISSLVSLRVLKLDGNMFQWSIPPGLLN-CQSLVTVDLSMNQLNGSLPDG 167
N P ++ L L L N +P GLLN ++L T+ L N L ++P G
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNNLT-ELPAGLLNGLENLDTLLLQENSLY-TIPKG 190
Query: 168 F 168
F
Sbjct: 191 F 191
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 61/138 (44%), Gaps = 27/138 (19%)
Query: 48 TIGKLSKLQSLDLSENNITALPSDLWSLGSLKSLNLSYNRISGSLPSNIGNFGLLEVFDL 107
T+ ++L L+L +T L D +L L +L+LS+N++ SLP L V D+
Sbjct: 50 TLMPYTRLTQLNLDRCELTKLQVD-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDV 107
Query: 108 SNNNFSGEIPAAISSLVSLRVLKLDGNMFQWSIPPGLLNCQSLVTVDLSMNQLNGSLPDG 167
S N + A+ L L+ L L GN + ++PPGLL
Sbjct: 108 SFNRLTSLPLGALRGLGELQELYLKGNELK-TLPPGLL---------------------- 144
Query: 168 FGAAFPKLKSLNLAGNEI 185
PKL+ L+LA N +
Sbjct: 145 --TPTPKLEKLSLANNNL 160
Score = 29.6 bits (65), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 12/145 (8%)
Query: 45 PDTTIGKLSKLQSLDLSENNITALPSDLWSLGSLKSL--NLSYN-RISGSLPSNIGNFGL 101
P + K++ ++ + ++TALP DL ++ L NL Y ++ +P
Sbjct: 2 PICEVSKVASHLEVNCDKRDLTALPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQLN 61
Query: 102 LEVFDLSNNNFSGEIPAAISSLVSLRVLKLDGNMFQWSIPPGLLNCQSLVTVDLSMNQLN 161
L+ +L+ G +P L L L N Q S+P +L +D+S N+L
Sbjct: 62 LDRCELTKLQVDGTLPV-------LGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLT 113
Query: 162 GSLPDGFGAAFPKLKSLNLAGNEIK 186
SLP G +L+ L L GNE+K
Sbjct: 114 -SLPLGALRGLGELQELYLKGNELK 137
Score = 29.6 bits (65), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 286 EFPQIGTLLGLEHLNLSRTSLIGDIPSEILQLSSLHTLDLSMNHLTGQIPTVSAKNLGII 345
+ P+ T+L L L SL +P L +L +L+ + G +P LG +
Sbjct: 28 DLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRCELTKLQVDGTLPV-----LGTL 82
Query: 346 DMSHNNLSGEIPASLLEKLPQMERFNFSYNNLT 378
D+SHN L +P L + LP + + S+N LT
Sbjct: 83 DLSHNQLQS-LPL-LGQTLPALTVLDVSFNRLT 113
Score = 29.3 bits (64), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 68/170 (40%), Gaps = 42/170 (24%)
Query: 257 QLSGEIFHNFSQAQNLKHLSLAYNRFTRQEFPQI---GTLLGLEHLNLSRTSLIGDIPSE 313
LS + + FS A + + L R E ++ GTL L L+LS L +P
Sbjct: 37 HLSENLLYTFSLATLMPYTRLTQLNLDRCELTKLQVDGTLPVLGTLDLSHNQL-QSLPLL 95
Query: 314 ILQLSSLHTLDLSMNHLTGQIPTVSAKNLG---------------------------IID 346
L +L LD+S N LT +P + + LG +
Sbjct: 96 GQTLPALTVLDVSFNRLTS-LPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLS 154
Query: 347 MSHNNLSGEIPASLLEKLPQMERFNFSYNNLTLCASELSPETLQTAFFGS 396
+++NNL+ E+PA LL L ++ TL E S T+ FFGS
Sbjct: 155 LANNNLT-ELPAGLLNGLENLD---------TLLLQENSLYTIPKGFFGS 194
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 96/239 (40%), Gaps = 51/239 (21%)
Query: 508 SNFDRGTLLAEGKFGPVY--RGFLPGGIHVAVKVLVHGSTL-TDQEAARELEYLGRIKHP 564
NF + + EG +G VY R L G + K+ + T A RE+ L + HP
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 565 NLVPLTGYCIAGDQRIAIYDYMENGNLQNL-----LHDLPLGVQXXXXXXXXXXXXXXXN 619
N+V L ++ +++++ +L+ L +PL
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLP------------------ 110
Query: 620 SIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLS 679
L+ ++ F+ + LAF H S ++HRD+K ++ ++ +L+
Sbjct: 111 ---------LIKSYLFQ------LLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLA 152
Query: 680 DFGLAKIFG---NGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
DFGLA+ FG E+ + Y PE + T D++ G + E++T +
Sbjct: 153 DFGLARAFGVPVRTYTHEVV--TLWYRAPEILLGXKYYST-AVDIWSLGCIFAEMVTRR 208
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 97/241 (40%), Gaps = 51/241 (21%)
Query: 506 ATSNFDRGTLLAEGKFGPVY--RGFLPGGIHVAVKVLVHGSTL-TDQEAARELEYLGRIK 562
+ NF + + EG +G VY R L G + K+ + T A RE+ L +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 563 HPNLVPLTGYCIAGDQRIAIYDYMENGNLQNL-----LHDLPLGVQXXXXXXXXXXXXXX 617
HPN+V L ++ +++++ +L+ L +PL
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLP---------------- 104
Query: 618 XNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPR 677
L+ ++ F+ + LAF H S ++HRD+K ++ ++ +
Sbjct: 105 -----------LIKSYLFQ------LLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIK 144
Query: 678 LSDFGLAKIFG---NGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITG 734
L+DFGLA+ FG E+ + Y PE + T D++ G + E++T
Sbjct: 145 LADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYST-AVDIWSLGCIFAEMVTR 201
Query: 735 K 735
+
Sbjct: 202 R 202
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 97/241 (40%), Gaps = 51/241 (21%)
Query: 506 ATSNFDRGTLLAEGKFGPVY--RGFLPGGIHVAVKVLVHGSTL-TDQEAARELEYLGRIK 562
+ NF + + EG +G VY R L G + K+ + T A RE+ L +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 563 HPNLVPLTGYCIAGDQRIAIYDYMENGNLQNL-----LHDLPLGVQXXXXXXXXXXXXXX 617
HPN+V L ++ +++++ +L+ L +PL
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLP---------------- 103
Query: 618 XNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPR 677
L+ ++ F+ + LAF H S ++HRD+K ++ ++ +
Sbjct: 104 -----------LIKSYLFQ------LLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIK 143
Query: 678 LSDFGLAKIFG---NGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITG 734
L+DFGLA+ FG E+ + Y PE + T D++ G + E++T
Sbjct: 144 LADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYST-AVDIWSLGCIFAEMVTR 200
Query: 735 K 735
+
Sbjct: 201 R 201
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 96/239 (40%), Gaps = 51/239 (21%)
Query: 508 SNFDRGTLLAEGKFGPVY--RGFLPGGIHVAVKVLVHGSTL-TDQEAARELEYLGRIKHP 564
NF + + EG +G VY R L G + K+ + T A RE+ L + HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 565 NLVPLTGYCIAGDQRIAIYDYMENGNLQNL-----LHDLPLGVQXXXXXXXXXXXXXXXN 619
N+V L ++ +++++ +L+ L +PL
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLP------------------ 103
Query: 620 SIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLS 679
L+ ++ F+ + LAF H S ++HRD+K ++ ++ +L+
Sbjct: 104 ---------LIKSYLFQ------LLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLA 145
Query: 680 DFGLAKIFG---NGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
DFGLA+ FG E+ + Y PE + T D++ G + E++T +
Sbjct: 146 DFGLARAFGVPVRTYTHEVV--TLWYRAPEILLGCKYYST-AVDIWSLGCIFAEMVTRR 201
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 14/149 (9%)
Query: 630 LTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEP-RLSDFGLAKIFG 688
LT + R+ I +AL + H S I+HRD+K +V +D L RL D+GLA+ +
Sbjct: 122 LTDYDIRYYI-YELLKALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH 177
Query: 689 NGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEG 748
G + + S + PE D+ D++ G + +I K+P Y +
Sbjct: 178 PGKEYNVRVASRYFKGPELLVDLQDYDY-SLDMWSLGCMFAGMIFRKEPFF--YGHDNHD 234
Query: 749 NLVSWVRGL------VRNNKGSRAIDPKI 771
LV + L V NK +DP++
Sbjct: 235 QLVKIAKVLGTDGLNVYLNKYRIELDPQL 263
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 96/239 (40%), Gaps = 51/239 (21%)
Query: 508 SNFDRGTLLAEGKFGPVY--RGFLPGGIHVAVKVLVHGSTL-TDQEAARELEYLGRIKHP 564
NF + + EG +G VY R L G + K+ + T A RE+ L + HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 565 NLVPLTGYCIAGDQRIAIYDYMENGNLQNL-----LHDLPLGVQXXXXXXXXXXXXXXXN 619
N+V L ++ +++++ +L+ L +PL
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLP------------------ 102
Query: 620 SIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLS 679
L+ ++ F+ + LAF H S ++HRD+K ++ ++ +L+
Sbjct: 103 ---------LIKSYLFQ------LLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLA 144
Query: 680 DFGLAKIFG---NGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
DFGLA+ FG E+ + Y PE + T D++ G + E++T +
Sbjct: 145 DFGLARAFGVPVRTYTHEVV--TLWYRAPEILLGCKYYST-AVDIWSLGCIFAEMVTRR 200
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 97/241 (40%), Gaps = 51/241 (21%)
Query: 506 ATSNFDRGTLLAEGKFGPVY--RGFLPGGIHVAVKVLVHGSTL-TDQEAARELEYLGRIK 562
+ NF + + EG +G VY R L G + K+ + T A RE+ L +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 563 HPNLVPLTGYCIAGDQRIAIYDYMENGNLQNL-----LHDLPLGVQXXXXXXXXXXXXXX 617
HPN+V L ++ +++++ +L+ L +PL
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLP---------------- 104
Query: 618 XNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPR 677
L+ ++ F+ + LAF H S ++HRD+K ++ ++ +
Sbjct: 105 -----------LIKSYLFQ------LLQGLAFCH---SHRVLHRDLKPENLLINTEGAIK 144
Query: 678 LSDFGLAKIFG---NGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITG 734
L+DFGLA+ FG E+ + Y PE + T D++ G + E++T
Sbjct: 145 LADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYST-AVDIWSLGCIFAEMVTR 201
Query: 735 K 735
+
Sbjct: 202 R 202
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 14/149 (9%)
Query: 630 LTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEP-RLSDFGLAKIFG 688
LT + R+ I +AL + H S I+HRD+K +V +D L RL D+GLA+ +
Sbjct: 122 LTDYDIRYYI-YELLKALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH 177
Query: 689 NGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEG 748
G + + S + PE D+ D++ G + +I K+P Y +
Sbjct: 178 PGKEYNVRVASRYFKGPELLVDLQDYDY-SLDMWSLGCMFAGMIFRKEPFF--YGHDNHD 234
Query: 749 NLVSWVRGL------VRNNKGSRAIDPKI 771
LV + L V NK +DP++
Sbjct: 235 QLVKIAKVLGTDGLNVYLNKYRIELDPQL 263
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 14/149 (9%)
Query: 630 LTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEP-RLSDFGLAKIFG 688
LT + R+ I +AL + H S I+HRD+K +V +D L RL D+GLA+ +
Sbjct: 122 LTDYDIRYYI-YELLKALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH 177
Query: 689 NGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEG 748
G + + S + PE D+ D++ G + +I K+P Y +
Sbjct: 178 PGKEYNVRVASRYFKGPELLVDLQDYDY-SLDMWSLGCMFAGMIFRKEPFF--YGHDNHD 234
Query: 749 NLVSWVRGL------VRNNKGSRAIDPKI 771
LV + L V NK +DP++
Sbjct: 235 QLVKIAKVLGTDGLNVYLNKYRIELDPQL 263
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 97/241 (40%), Gaps = 51/241 (21%)
Query: 506 ATSNFDRGTLLAEGKFGPVY--RGFLPGGIHVAVKVLVHGSTL-TDQEAARELEYLGRIK 562
+ NF + + EG +G VY R L G + K+ + T A RE+ L +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 563 HPNLVPLTGYCIAGDQRIAIYDYMENGNLQNL-----LHDLPLGVQXXXXXXXXXXXXXX 617
HPN+V L ++ +++++ +L+ L +PL
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLP---------------- 103
Query: 618 XNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPR 677
L+ ++ F+ + LAF H S ++HRD+K ++ ++ +
Sbjct: 104 -----------LIKSYLFQ------LLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIK 143
Query: 678 LSDFGLAKIFG---NGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITG 734
L+DFGLA+ FG E+ + Y PE + T D++ G + E++T
Sbjct: 144 LADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYST-AVDIWSLGCIFAEMVTR 200
Query: 735 K 735
+
Sbjct: 201 R 201
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 14/149 (9%)
Query: 630 LTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEP-RLSDFGLAKIFG 688
LT + R+ I +AL + H S I+HRD+K +V +D L RL D+GLA+ +
Sbjct: 122 LTDYDIRYYI-YELLKALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH 177
Query: 689 NGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEG 748
G + + S + PE D+ D++ G + +I K+P Y +
Sbjct: 178 PGKEYNVRVASRYFKGPELLVDLQDYDY-SLDMWSLGCMFAGMIFRKEPFF--YGHDNHD 234
Query: 749 NLVSWVRGL------VRNNKGSRAIDPKI 771
LV + L V NK +DP++
Sbjct: 235 QLVKIAKVLGTDGLNVYLNKYRIELDPQL 263
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 14/149 (9%)
Query: 630 LTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEP-RLSDFGLAKIFG 688
LT + R+ I +AL + H S I+HRD+K +V +D L RL D+GLA+ +
Sbjct: 124 LTDYDIRYYI-YELLKALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH 179
Query: 689 NGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEG 748
G + + S + PE D+ D++ G + +I K+P Y +
Sbjct: 180 PGKEYNVRVASRYFKGPELLVDLQDYDY-SLDMWSLGCMFAGMIFRKEPFF--YGHDNHD 236
Query: 749 NLVSWVRGL------VRNNKGSRAIDPKI 771
LV + L V NK +DP++
Sbjct: 237 QLVKIAKVLGTDGLNVYLNKYRIELDPQL 265
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIP 704
R L ++H S IIHRD+K S++ ++ + E ++ DFGLA+ + + +A + Y
Sbjct: 142 RGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVA--TRWYRA 196
Query: 705 PEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE + D++ G ++ EL+TG+
Sbjct: 197 PEIMLNWMHY-NQTVDIWSVGCIMAELLTGR 226
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 15/110 (13%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSV-YLDMNLEP---RLSDFGLAKIF--GNGLDEEIARG 698
+ + +LH + ++HRD+K S++ Y+D + P R+ DFG AK NGL
Sbjct: 127 KTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCY- 182
Query: 699 SPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLG---DDYPEE 745
+ ++ PE + D++ GV+L ++TG P DD PEE
Sbjct: 183 TANFVAPEVLERQG--YDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEE 230
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 96/239 (40%), Gaps = 51/239 (21%)
Query: 508 SNFDRGTLLAEGKFGPVY--RGFLPGGIHVAVKVLVHGSTL-TDQEAARELEYLGRIKHP 564
NF + + EG +G VY R L G + K+ + T A RE+ L + HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 565 NLVPLTGYCIAGDQRIAIYDYMENGNLQNL-----LHDLPLGVQXXXXXXXXXXXXXXXN 619
N+V L ++ +++++ +L+ L +PL
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLP------------------ 103
Query: 620 SIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLS 679
L+ ++ F+ + LAF H S ++HRD+K ++ ++ +L+
Sbjct: 104 ---------LIKSYLFQ------LLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLA 145
Query: 680 DFGLAKIFG---NGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
DFGLA+ FG E+ + Y PE + T D++ G + E++T +
Sbjct: 146 DFGLARAFGVPVRTYTHEVV--TLWYRAPEILLGCKYYST-AVDIWSLGCIFAEMVTRR 201
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 14/149 (9%)
Query: 630 LTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEP-RLSDFGLAKIFG 688
LT + R+ I +AL + H S I+HRD+K +V +D L RL D+GLA+ +
Sbjct: 122 LTDYDIRYYI-YELLKALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH 177
Query: 689 NGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEG 748
G + + S + PE D+ D++ G + +I K+P Y +
Sbjct: 178 PGKEYNVRVASRYFKGPELLVDLQDYDY-SLDMWSLGCMFAGMIFRKEPFF--YGHDNHD 234
Query: 749 NLVSWVRGL------VRNNKGSRAIDPKI 771
LV + L V NK +DP++
Sbjct: 235 QLVKIAKVLGTDGLNVYLNKYRIELDPQL 263
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 96/239 (40%), Gaps = 51/239 (21%)
Query: 508 SNFDRGTLLAEGKFGPVY--RGFLPGGIHVAVKVLVHGSTL-TDQEAARELEYLGRIKHP 564
NF + + EG +G VY R L G + K+ + T A RE+ L + HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 565 NLVPLTGYCIAGDQRIAIYDYMENGNLQNL-----LHDLPLGVQXXXXXXXXXXXXXXXN 619
N+V L ++ +++++ +L+ L +PL
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLP------------------ 102
Query: 620 SIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLS 679
L+ ++ F+ + LAF H S ++HRD+K ++ ++ +L+
Sbjct: 103 ---------LIKSYLFQ------LLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLA 144
Query: 680 DFGLAKIFG---NGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
DFGLA+ FG E+ + Y PE + T D++ G + E++T +
Sbjct: 145 DFGLARAFGVPVRTYTHEVV--TLWYRAPEILLGCKYYST-AVDIWSLGCIFAEMVTRR 200
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIP 704
R L ++H S IIHRD+K S++ ++ + E ++ DFGLA+ + + +A + Y
Sbjct: 138 RGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVA--TRWYRA 192
Query: 705 PEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE + D++ G ++ EL+TG+
Sbjct: 193 PEIMLNWMHY-NQTVDIWSVGCIMAELLTGR 222
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 14/149 (9%)
Query: 630 LTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEP-RLSDFGLAKIFG 688
LT + R+ I +AL + H S I+HRD+K +V +D L RL D+GLA+ +
Sbjct: 123 LTDYDIRYYI-YELLKALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH 178
Query: 689 NGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEG 748
G + + S + PE D+ D++ G + +I K+P Y +
Sbjct: 179 PGKEYNVRVASRYFKGPELLVDLQDYDY-SLDMWSLGCMFAGMIFRKEPFF--YGHDNHD 235
Query: 749 NLVSWVRGL------VRNNKGSRAIDPKI 771
LV + L V NK +DP++
Sbjct: 236 QLVKIAKVLGTDGLNVYLNKYRIELDPQL 264
>pdb|1GWB|B Chain B, Structure Of Glycoprotein 1b
pdb|1GWB|A Chain A, Structure Of Glycoprotein 1b
Length = 281
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 61/121 (50%), Gaps = 5/121 (4%)
Query: 50 GKLSKLQSLDLSENNITALPSDLWSLGSLKSLNLSYNRISGSLP-SNIGNFGLLEVFDLS 108
G L L +LDLS N + +LP +L +L L++S+NR++ SLP + G L+ L
Sbjct: 75 GTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLT-SLPLGALRGLGELQELYLK 133
Query: 109 NNNFSGEIPAAISSLVSLRVLKLDGNMFQWSIPPGLLN-CQSLVTVDLSMNQLNGSLPDG 167
N P ++ L L L N +P GLLN ++L T+ L N L ++P G
Sbjct: 134 GNELKTLPPGLLTPTPKLEKLSLANNNLT-ELPAGLLNGLENLDTLLLQENSLY-TIPKG 191
Query: 168 F 168
F
Sbjct: 192 F 192
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 61/138 (44%), Gaps = 27/138 (19%)
Query: 48 TIGKLSKLQSLDLSENNITALPSDLWSLGSLKSLNLSYNRISGSLPSNIGNFGLLEVFDL 107
T+ ++L L+L +T L D +L L +L+LS+N++ SLP L V D+
Sbjct: 51 TLMPYTRLTQLNLDRCELTKLQVD-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDV 108
Query: 108 SNNNFSGEIPAAISSLVSLRVLKLDGNMFQWSIPPGLLNCQSLVTVDLSMNQLNGSLPDG 167
S N + A+ L L+ L L GN + ++PPGLL
Sbjct: 109 SFNRLTSLPLGALRGLGELQELYLKGNELK-TLPPGLL---------------------- 145
Query: 168 FGAAFPKLKSLNLAGNEI 185
PKL+ L+LA N +
Sbjct: 146 --TPTPKLEKLSLANNNL 161
Score = 29.3 bits (64), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 286 EFPQIGTLLGLEHLNLSRTSLIGDIPSEILQLSSLHTLDLSMNHLTGQIPTVSAKNLGII 345
+ P+ T+L L L SL +P L +L +L+ + G +P LG +
Sbjct: 29 DLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRCELTKLQVDGTLPV-----LGTL 83
Query: 346 DMSHNNLSGEIPASLLEKLPQMERFNFSYNNLT 378
D+SHN L +P L + LP + + S+N LT
Sbjct: 84 DLSHNQLQS-LPL-LGQTLPALTVLDVSFNRLT 114
>pdb|4ECO|A Chain A, Crystal Structure Of A Hypothetical Protein (Bacegg_03329)
From Bacteroides Eggerthii Dsm 20697 At 2.70 A
Resolution
pdb|4ECO|B Chain B, Crystal Structure Of A Hypothetical Protein (Bacegg_03329)
From Bacteroides Eggerthii Dsm 20697 At 2.70 A
Resolution
Length = 636
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 129/303 (42%), Gaps = 50/303 (16%)
Query: 64 NITALPSDLWSLGSLKSLNLSYNR-ISGSLPSNIGNFGLLEVFDLSNNNFSGEIPAAISS 122
N+T LP+ L +L + +N++ NR ISG + +++ A +
Sbjct: 261 NLTKLPTFLKALPEXQLINVACNRGISG---------------EQLKDDWQALADAPVGE 305
Query: 123 LVSLRVLKLDGNMFQWSIPPGLLNCQSLVTVDLSMNQLNGSLPDGFGAAFPKLKSLNLAG 182
+ + + + N+ + + L + L ++ NQL G LP FG+ KL SLNLA
Sbjct: 306 KIQIIYIGYN-NLKTFPVETSLQKXKKLGXLECLYNQLEGKLP-AFGSEI-KLASLNLAY 362
Query: 183 NEIKGRDTHFAGL-KSITNLNISGNLFQGSVMGVF-LESLEV---IDLRSNQFQGHISQV 237
N+I +F G + + NL+ + N + + +F +S+ V ID N+ G +
Sbjct: 363 NQITEIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVXSAIDFSYNEI-GSVDGK 420
Query: 238 QFN----SSYNWSRLVYVDLSENQLSGEIFHNFSQAQNLKHLSLAYNRFTRQEFPQIGTL 293
F+ + + + ++LS NQ+S FS L ++L N T E P+
Sbjct: 421 NFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLXGNXLT--EIPK--NS 476
Query: 294 LGLEHLNLSRTSLIGDIPSEILQLSSLHTLDLSMNHLTGQIPTVSAKNLGI---IDMSHN 350
L E+ N T L L ++DL N LT A L ID+S+N
Sbjct: 477 LKDENENFKNTYL-------------LTSIDLRFNKLTKLSDDFRATTLPYLVGIDLSYN 523
Query: 351 NLS 353
+ S
Sbjct: 524 SFS 526
Score = 31.2 bits (69), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 310 IPSEILQLSSLHTLDLSMNHLTGQIPTVSAK-NLGIIDMSHNNLSGEIPASLLEKLPQME 368
+ + + + L L+ N L G++P ++ L +++++N ++ EIPA+ Q+E
Sbjct: 322 VETSLQKXKKLGXLECLYNQLEGKLPAFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVE 380
Query: 369 RFNFSYNNL 377
+F++N L
Sbjct: 381 NLSFAHNKL 389
Score = 30.0 bits (66), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 87/212 (41%), Gaps = 24/212 (11%)
Query: 46 DTTIGKLSKLQSLDLSENNITALPSDLWSLGSLKSLNLSYNRISGSLPSNIGNFG-LLEV 104
+T++ K KL L+ N + S L SLNL+YN+I+ +P+N F +E
Sbjct: 323 ETSLQKXKKLGXLECLYNQLEGKLPAFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVEN 381
Query: 105 FDLSNN------NFSGEIPAAISSLVSL---RVLKLDGNMFQWSIPPGLLNCQSLVTVDL 155
++N N ++ S + + +DG F + P ++ +++L
Sbjct: 382 LSFAHNKLKYIPNIFDAKSVSVXSAIDFSYNEIGSVDGKNFD-PLDPTPFKGINVSSINL 440
Query: 156 SMNQLNGSLPDGFGAAFPKLKSLNLAG--------NEIKGRDTHFAGLKSITNLNISGN- 206
S NQ++ + F P L S+NL G N +K + +F +T++++ N
Sbjct: 441 SNNQISKFPKELFSTGSP-LSSINLXGNXLTEIPKNSLKDENENFKNTYLLTSIDLRFNK 499
Query: 207 --LFQGSVMGVFLESLEVIDLRSNQFQGHISQ 236
L L IDL N F +Q
Sbjct: 500 LTKLSDDFRATTLPYLVGIDLSYNSFSKFPTQ 531
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 97/241 (40%), Gaps = 51/241 (21%)
Query: 506 ATSNFDRGTLLAEGKFGPVY--RGFLPGGIHVAVKVLVHGSTL-TDQEAARELEYLGRIK 562
+ NF + + EG +G VY R L G + K+ + T A RE+ L +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 563 HPNLVPLTGYCIAGDQRIAIYDYMENGNLQNL-----LHDLPLGVQXXXXXXXXXXXXXX 617
HPN+V L ++ +++++ +L+ L +PL
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLP---------------- 106
Query: 618 XNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPR 677
L+ ++ F+ + LAF H S ++HRD+K ++ ++ +
Sbjct: 107 -----------LIKSYLFQ------LLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIK 146
Query: 678 LSDFGLAKIFG---NGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITG 734
L+DFGLA+ FG E+ + Y PE + T D++ G + E++T
Sbjct: 147 LADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYST-AVDIWSLGCIFAEMVTR 203
Query: 735 K 735
+
Sbjct: 204 R 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 97/241 (40%), Gaps = 51/241 (21%)
Query: 506 ATSNFDRGTLLAEGKFGPVY--RGFLPGGIHVAVKVLVHGSTL-TDQEAARELEYLGRIK 562
+ NF + + EG +G VY R L G + K+ + T A RE+ L +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 563 HPNLVPLTGYCIAGDQRIAIYDYMENGNLQNL-----LHDLPLGVQXXXXXXXXXXXXXX 617
HPN+V L ++ +++++ +L+ L +PL
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLP---------------- 105
Query: 618 XNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPR 677
L+ ++ F+ + LAF H S ++HRD+K ++ ++ +
Sbjct: 106 -----------LIKSYLFQ------LLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIK 145
Query: 678 LSDFGLAKIFG---NGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITG 734
L+DFGLA+ FG E+ + Y PE + T D++ G + E++T
Sbjct: 146 LADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYST-AVDIWSLGCIFAEMVTR 202
Query: 735 K 735
+
Sbjct: 203 R 203
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 14/149 (9%)
Query: 630 LTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEP-RLSDFGLAKIFG 688
LT + R+ I +AL + H S I+HRD+K +V +D L RL D+GLA+ +
Sbjct: 123 LTDYDIRYYI-YELLKALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH 178
Query: 689 NGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEG 748
G + + S + PE D+ D++ G + +I K+P Y +
Sbjct: 179 PGKEYNVRVASRYFKGPELLVDLQDYDY-SLDMWSLGCMFAGMIFRKEPFF--YGHDNHD 235
Query: 749 NLVSWVRGL------VRNNKGSRAIDPKI 771
LV + L V NK +DP++
Sbjct: 236 QLVKIAKVLGTDGLNVYLNKYRIELDPQL 264
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 96/239 (40%), Gaps = 51/239 (21%)
Query: 508 SNFDRGTLLAEGKFGPVY--RGFLPGGIHVAVKVLVHGSTL-TDQEAARELEYLGRIKHP 564
NF + + EG +G VY R L G + K+ + T A RE+ L + HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 565 NLVPLTGYCIAGDQRIAIYDYMENGNLQNL-----LHDLPLGVQXXXXXXXXXXXXXXXN 619
N+V L ++ +++++ +L+ L +PL
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLP------------------ 102
Query: 620 SIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLS 679
L+ ++ F+ + LAF H S ++HRD+K ++ ++ +L+
Sbjct: 103 ---------LIKSYLFQ------LLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLA 144
Query: 680 DFGLAKIFG---NGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
DFGLA+ FG E+ + Y PE + T D++ G + E++T +
Sbjct: 145 DFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYST-AVDIWSLGCIFAEMVTRR 200
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 97/241 (40%), Gaps = 51/241 (21%)
Query: 506 ATSNFDRGTLLAEGKFGPVY--RGFLPGGIHVAVKVLVHGSTL-TDQEAARELEYLGRIK 562
+ NF + + EG +G VY R L G + K+ + T A RE+ L +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 563 HPNLVPLTGYCIAGDQRIAIYDYMENGNLQNL-----LHDLPLGVQXXXXXXXXXXXXXX 617
HPN+V L ++ +++++ +L+ L +PL
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKTFMDASALTGIPLP---------------- 106
Query: 618 XNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPR 677
L+ ++ F+ + LAF H S ++HRD+K ++ ++ +
Sbjct: 107 -----------LIKSYLFQ------LLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIK 146
Query: 678 LSDFGLAKIFG---NGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITG 734
L+DFGLA+ FG E+ + Y PE + T D++ G + E++T
Sbjct: 147 LADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYST-AVDIWSLGCIFAEMVTR 203
Query: 735 K 735
+
Sbjct: 204 R 204
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 96/239 (40%), Gaps = 51/239 (21%)
Query: 508 SNFDRGTLLAEGKFGPVY--RGFLPGGIHVAVKVLVHGSTL-TDQEAARELEYLGRIKHP 564
NF + + EG +G VY R L G + K+ + T A RE+ L + HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 565 NLVPLTGYCIAGDQRIAIYDYMENGNLQNL-----LHDLPLGVQXXXXXXXXXXXXXXXN 619
N+V L ++ +++++ +L+ L +PL
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLP------------------ 102
Query: 620 SIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLS 679
L+ ++ F+ + LAF H S ++HRD+K ++ ++ +L+
Sbjct: 103 ---------LIKSYLFQ------LLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLA 144
Query: 680 DFGLAKIFG---NGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
DFGLA+ FG E+ + Y PE + T D++ G + E++T +
Sbjct: 145 DFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYST-AVDIWSLGCIFAEMVTRR 200
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 82/196 (41%), Gaps = 19/196 (9%)
Query: 628 GLLTTWRFRHKIALG--------TARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLS 679
G L + RH I L +A+LH + IHR++ A +V LD + ++
Sbjct: 103 GSLRDYLPRHSIGLAQLLLFAQQICEGMAYLH---AQHYIHRNLAARNVLLDNDRLVKIG 159
Query: 680 DFGLAKIFGNGLDEEIAR---GSPGY-IPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
DFGLAK G + R SP + PE + + SDV+ +GV L EL+T
Sbjct: 160 DFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYA--SDVWSFGVTLYELLTHC 217
Query: 736 KPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLP 795
P K L+ +G + + + ++ R P+K E + C
Sbjct: 218 D--SSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEA 275
Query: 796 LKRPSMQQIVGLLKDI 811
RP+ + ++ +LK +
Sbjct: 276 SFRPTFENLIPILKTV 291
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 97/241 (40%), Gaps = 51/241 (21%)
Query: 506 ATSNFDRGTLLAEGKFGPVY--RGFLPGGIHVAVKVLVHGSTL-TDQEAARELEYLGRIK 562
+ NF + + EG +G VY R L G + K+ + T A RE+ L +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 563 HPNLVPLTGYCIAGDQRIAIYDYMENGNLQNL-----LHDLPLGVQXXXXXXXXXXXXXX 617
HPN+V L ++ +++++ +L+ L +PL
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLP---------------- 105
Query: 618 XNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPR 677
L+ ++ F+ + LAF H S ++HRD+K ++ ++ +
Sbjct: 106 -----------LIKSYLFQ------LLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIK 145
Query: 678 LSDFGLAKIFG---NGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITG 734
L+DFGLA+ FG E+ + Y PE + T D++ G + E++T
Sbjct: 146 LADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYST-AVDIWSLGCIFAEMVTR 202
Query: 735 K 735
+
Sbjct: 203 R 203
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 96/239 (40%), Gaps = 51/239 (21%)
Query: 508 SNFDRGTLLAEGKFGPVY--RGFLPGGIHVAVKVLVHGSTL-TDQEAARELEYLGRIKHP 564
NF + + EG +G VY R L G + K+ + T A RE+ L + HP
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 565 NLVPLTGYCIAGDQRIAIYDYMENGNLQNL-----LHDLPLGVQXXXXXXXXXXXXXXXN 619
N+V L ++ +++++ +L+ L +PL
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLP------------------ 104
Query: 620 SIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLS 679
L+ ++ F+ + LAF H S ++HRD+K ++ ++ +L+
Sbjct: 105 ---------LIKSYLFQ------LLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLA 146
Query: 680 DFGLAKIFG---NGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
DFGLA+ FG E+ + Y PE + T D++ G + E++T +
Sbjct: 147 DFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYST-AVDIWSLGCIFAEMVTRR 202
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 103/253 (40%), Gaps = 48/253 (18%)
Query: 510 FDRGTLLAEGKFGPVYRGFLPG-GIHVAVKVLVHGST------LTDQEAARELEYLGRIK 562
+D G L G+F V + G+ A K + T ++ ++ RE+ L I+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 563 HPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQ 622
HPN++ L I I + + G L + L + + +
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAE-------------------KESLTE 113
Query: 623 NVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYL-DMNL-EPRLS- 679
+E F +I G + +LH S I H D+K ++ L D N+ +PR+
Sbjct: 114 EEATE-------FLKQILNG----VYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 680 -DFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTP-KSDVYCYGVVLLELITGKKP 737
DFGLA G + + G+P ++ PE + P ++D++ GV+ L++G P
Sbjct: 160 IDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE---PLGLEADMWSIGVITYILLSGASP 216
Query: 738 LGDDYPEEKEGNL 750
D +E N+
Sbjct: 217 FLGDTKQETLANV 229
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 14/149 (9%)
Query: 630 LTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEP-RLSDFGLAKIFG 688
LT + R+ I +AL + H S I+HRD+K +V +D L RL D+GLA+ +
Sbjct: 122 LTDYDIRYYI-YELLKALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH 177
Query: 689 NGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEG 748
G + + S + PE D+ D++ G + +I K+P Y +
Sbjct: 178 PGKEYNVRVASRYFKGPELLVDLQDYDY-SLDMWSLGCMFAGMIFRKEPFF--YGHDNHD 234
Query: 749 NLVSWVRGL------VRNNKGSRAIDPKI 771
LV + L V NK +DP++
Sbjct: 235 QLVKIAKVLGTDGLNVYLNKYRIELDPQL 263
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIP 704
R L ++H S IIHRD+K S++ ++ + E ++ DFGLA+ + + +A + Y
Sbjct: 165 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA--TRWYRA 219
Query: 705 PEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE + D++ G ++ EL+TG+
Sbjct: 220 PEIMLNWMHY-NMTVDIWSVGCIMAELLTGR 249
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 97/241 (40%), Gaps = 51/241 (21%)
Query: 506 ATSNFDRGTLLAEGKFGPVY--RGFLPGGIHVAVKVLVHGSTL-TDQEAARELEYLGRIK 562
+ NF + + EG +G VY R L G + K+ + T A RE+ L +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 563 HPNLVPLTGYCIAGDQRIAIYDYMENGNLQNL-----LHDLPLGVQXXXXXXXXXXXXXX 617
HPN+V L ++ +++++ +L+ L +PL
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLP---------------- 105
Query: 618 XNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPR 677
L+ ++ F+ + LAF H S ++HRD+K ++ ++ +
Sbjct: 106 -----------LIKSYLFQ------LLQGLAFCH---SHRVLHRDLKPENLLINTEGAIK 145
Query: 678 LSDFGLAKIFG---NGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITG 734
L+DFGLA+ FG E+ + Y PE + T D++ G + E++T
Sbjct: 146 LADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYST-AVDIWSLGCIFAEMVTR 202
Query: 735 K 735
+
Sbjct: 203 R 203
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIP 704
R L ++H S IIHRD+K S++ ++ + E ++ D+GLA+ + + +A + Y
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVA--TRWYRA 190
Query: 705 PEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE + D++ G ++ EL+TG+
Sbjct: 191 PEIMLNWMHY-NQTVDIWSVGCIMAELLTGR 220
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 112/304 (36%), Gaps = 59/304 (19%)
Query: 516 LAEGKFGPVYRGFL------PGGIHVAVKVLVHGSTLTDQ-EAARELEYLGRIKHPNLVP 568
L G FG VY G + P + VAVK L + D+ + E + + H N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 569 LTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEG 628
G + R + + M G+L++ L + S
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRE-------------------TRPRPSQPSSLA 153
Query: 629 LLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLS---DFGLAK 685
+L IA G + L H IHRDI A + L R++ DFG+A+
Sbjct: 154 MLDLLHVARDIACG-CQYLEENH------FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
Query: 686 IFGNGLDEEIARGSPGYIPPEFAQPDSDFP---TPKSDVYCYGVVLLELIT-GKKPLGDD 741
+G +P ++ P++ T K+D + +GV+L E+ + G P
Sbjct: 207 DIYRA--SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP---- 260
Query: 742 YPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSM 801
YP + ++ +V G R +DP GP +I C P RP+
Sbjct: 261 YPSKSNQEVLEFV------TSGGR-MDPPKNCPGP------VYRIMTQCWQHQPEDRPNF 307
Query: 802 QQIV 805
I+
Sbjct: 308 AIIL 311
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 96/239 (40%), Gaps = 51/239 (21%)
Query: 508 SNFDRGTLLAEGKFGPVY--RGFLPGGIHVAVKVLVHGSTL-TDQEAARELEYLGRIKHP 564
NF + + EG +G VY R L G + K+ + T A RE+ L + HP
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 565 NLVPLTGYCIAGDQRIAIYDYMENGNLQNL-----LHDLPLGVQXXXXXXXXXXXXXXXN 619
N+V L ++ +++++ +L+ L +PL
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLP------------------ 110
Query: 620 SIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLS 679
L+ ++ F+ + LAF H S ++HRD+K ++ ++ +L+
Sbjct: 111 ---------LIKSYLFQ------LLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLA 152
Query: 680 DFGLAKIFG---NGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
DFGLA+ FG E+ + Y PE + T D++ G + E++T +
Sbjct: 153 DFGLARAFGVPVRTYTHEVV--TLWYRAPEILLGCKYYST-AVDIWSLGCIFAEMVTRR 208
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 97/243 (39%), Gaps = 51/243 (20%)
Query: 504 LSATSNFDRGTLLAEGKFGPVY--RGFLPGGIHVAVKVLVHGSTL-TDQEAARELEYLGR 560
L NF + + EG +G VY R L G + K+ + T A RE+ L
Sbjct: 3 LVDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 62
Query: 561 IKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNL-----LHDLPLGVQXXXXXXXXXXXX 615
+ HPN+V L ++ +++++ +L+ L +PL
Sbjct: 63 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLP-------------- 107
Query: 616 XXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLE 675
L+ ++ F+ + LAF H S ++HRD+K ++ ++
Sbjct: 108 -------------LIKSYLFQ------LLQGLAFCH---SHRVLHRDLKPQNLLINTEGA 145
Query: 676 PRLSDFGLAKIFG---NGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELI 732
+L+DFGLA+ FG E+ + Y PE + T D++ G + E++
Sbjct: 146 IKLADFGLARAFGVPVRTYTHEVV--TLWYRAPEILLGCKYYST-AVDIWSLGCIFAEMV 202
Query: 733 TGK 735
T +
Sbjct: 203 TRR 205
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 6/110 (5%)
Query: 630 LTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEP-RLSDFGLAKIFG 688
LT + R+ I +AL + H S I+HRD+K +V +D L RL D+GLA+ +
Sbjct: 143 LTDYDIRYYI-YELLKALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH 198
Query: 689 NGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
G + + S + PE D+ D++ G + +I K+P
Sbjct: 199 PGKEYNVRVASRYFKGPELLVDLQDYDY-SLDMWSLGCMFAGMIFRKEPF 247
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 76/213 (35%), Gaps = 39/213 (18%)
Query: 535 VAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNL 594
VAVK + G + D+ RE+ ++HPN+V + + +Y G L
Sbjct: 47 VAVKYIERGEKI-DENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL--- 102
Query: 595 LHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGC 654
I N G F ++ G + A
Sbjct: 103 -----------------------FERICNAGRFSEDEARFFFQQLISGVSYCHAM----- 134
Query: 655 SPPIIHRDIKASSVYLDMNLEPRLS--DFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDS 712
+ HRD+K + LD + PRL FG +K + G+P YI PE
Sbjct: 135 --QVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVLL-KK 191
Query: 713 DFPTPKSDVYCYGVVLLELITGKKPLGDDYPEE 745
++ +DV+ GV L ++ G P D PEE
Sbjct: 192 EYDGKVADVWSCGVTLYVMLVGAYPFED--PEE 222
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 103/255 (40%), Gaps = 52/255 (20%)
Query: 510 FDRGTLLAEGKFGPVYRGFLPG-GIHVAVKVLVHGST------LTDQEAARELEYLGRIK 562
+D G L GKF V + G+ A K + T ++ ++ RE+ L I+
Sbjct: 13 YDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 563 HPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQ 622
HPN++ L I I + + G L + L + + +
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAE-------------------KESLTE 113
Query: 623 NVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYL-DMNL-EPRLS- 679
+E F +I G + +LH S I H D+K ++ L D N+ +PR+
Sbjct: 114 EEATE-------FLKQILNG----VYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 680 -DFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTP---KSDVYCYGVVLLELITGK 735
DFGLA G + + G+P ++ PE + P ++D++ GV+ L++G
Sbjct: 160 IDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE-----PLGLEADMWSIGVITYILLSGA 214
Query: 736 KPLGDDYPEEKEGNL 750
P D +E N+
Sbjct: 215 SPFLGDTKQETLANV 229
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 98/241 (40%), Gaps = 51/241 (21%)
Query: 506 ATSNFDRGTLLAEGKFGPVY--RGFLPGGIHVAVKVLVHGSTL-TDQEAARELEYLGRIK 562
+ NF + + EG +G VY R L G + K+ + T A RE+ L +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 563 HPNLVPLTGYCIAGDQRIAIYDYMENGNLQNL-----LHDLPLGVQXXXXXXXXXXXXXX 617
HPN+V L ++ +++++ + +L+ L +PL
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLP---------------- 104
Query: 618 XNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPR 677
L+ ++ F+ + LAF H S ++HRD+K ++ ++ +
Sbjct: 105 -----------LIKSYLFQ------LLQGLAFCH---SHRVLHRDLKPENLLINTEGAIK 144
Query: 678 LSDFGLAKIFG---NGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITG 734
L+DFGLA+ FG E+ + Y PE + T D++ G + E++T
Sbjct: 145 LADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYST-AVDIWSLGCIFAEMVTR 201
Query: 735 K 735
+
Sbjct: 202 R 202
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 55/109 (50%), Gaps = 11/109 (10%)
Query: 649 FLHHGCSPPIIHRDIKASSVYL-DMNL---EPRLSDFGLAKIFGNGLDEEIARGSPGYIP 704
+LH + I H D+K ++ L D N+ +L DFGLA +G++ + G+P ++
Sbjct: 130 YLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVA 186
Query: 705 PEFAQPDSDFPTP-KSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVS 752
PE + P ++D++ GV+ L++G P D +E N+ S
Sbjct: 187 PEIVNYE---PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITS 232
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 98/241 (40%), Gaps = 51/241 (21%)
Query: 506 ATSNFDRGTLLAEGKFGPVY--RGFLPGGIHVAVKVLVHGSTL-TDQEAARELEYLGRIK 562
+ NF + + EG +G VY R L G + K+ + T A RE+ L +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 563 HPNLVPLTGYCIAGDQRIAIYDYMENGNLQNL-----LHDLPLGVQXXXXXXXXXXXXXX 617
HPN+V L ++ ++++++ +L+ L +PL
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHVDQ-DLKKFMDASALTGIPLP---------------- 106
Query: 618 XNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPR 677
L+ ++ F+ + LAF H S ++HRD+K ++ ++ +
Sbjct: 107 -----------LIKSYLFQ------LLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIK 146
Query: 678 LSDFGLAKIFG---NGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITG 734
L+DFGLA+ FG E+ + Y PE + T D++ G + E++T
Sbjct: 147 LADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYST-AVDIWSLGCIFAEMVTR 203
Query: 735 K 735
+
Sbjct: 204 R 204
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 55/109 (50%), Gaps = 11/109 (10%)
Query: 649 FLHHGCSPPIIHRDIKASSVYL-DMNL---EPRLSDFGLAKIFGNGLDEEIARGSPGYIP 704
+LH + I H D+K ++ L D N+ +L DFGLA +G++ + G+P ++
Sbjct: 130 YLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVA 186
Query: 705 PEFAQPDSDFPTP-KSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVS 752
PE + P ++D++ GV+ L++G P D +E N+ S
Sbjct: 187 PEIVNYE---PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITS 232
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 76/213 (35%), Gaps = 39/213 (18%)
Query: 535 VAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNL 594
VAVK + G + D+ RE+ ++HPN+V + + +Y G L
Sbjct: 47 VAVKYIERGEKI-DENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL--- 102
Query: 595 LHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGC 654
I N G F ++ G + A
Sbjct: 103 -----------------------FERICNAGRFSEDEARFFFQQLISGVSYCHAM----- 134
Query: 655 SPPIIHRDIKASSVYLDMNLEPRLS--DFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDS 712
+ HRD+K + LD + PRL FG +K + G+P YI PE
Sbjct: 135 --QVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLL-KK 191
Query: 713 DFPTPKSDVYCYGVVLLELITGKKPLGDDYPEE 745
++ +DV+ GV L ++ G P D PEE
Sbjct: 192 EYDGKVADVWSCGVTLYVMLVGAYPFED--PEE 222
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 59/134 (44%), Gaps = 25/134 (18%)
Query: 644 ARALAFLHHGCSPPIIHRDIKASSVYLDM-------------NLEPRLSDFGLAKIFGNG 690
A +A LH S IIHRD+K ++ + NL +SDFGL K +G
Sbjct: 143 ASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG 199
Query: 691 -----LDEEIARGSPGYIPPEFAQPDSDFPTPKS-DVYCYGVVLLELIT-GKKPLGDDYP 743
+ G+ G+ PE + + +S D++ G V +++ GK P GD Y
Sbjct: 200 QXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKY- 258
Query: 744 EEKEGNLVSWVRGL 757
+E N++ + L
Sbjct: 259 -SRESNIIRGIFSL 271
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEP-RLSDFGLAKIFGNGLDEEIARGSPGYI 703
R+LA++H S I HRDIK ++ LD + +L DFG AK G S Y
Sbjct: 167 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 223
Query: 704 PPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE +D+ T DV+ G VL EL+ G+
Sbjct: 224 APELIFGATDY-TSSIDVWSAGCVLAELLLGQ 254
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 21/100 (21%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEP-RLSDFGLAKIFGNGLDEEIARGSPG-- 701
R+LA++H S I HRDIK ++ LD + +L DFG AK ++ RG P
Sbjct: 212 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--------QLVRGEPNVS 260
Query: 702 ------YIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
Y PE +D+ T DV+ G VL EL+ G+
Sbjct: 261 YICSRYYRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQ 299
>pdb|3V44|A Chain A, Crystal Structure Of The N-Terminal Fragment Of Zebrafish
Tlr5
Length = 407
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 131/325 (40%), Gaps = 38/325 (11%)
Query: 46 DTTIGKLSKLQSLDLSENN--ITALPSDLWSLGSLKSLNLSYNRISGSLPSNIGNFGLLE 103
+T+ +L LQ L + + + + L SL L L YN+ LE
Sbjct: 47 ETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLE 106
Query: 104 VFDLSNNNFSGEIPAA--ISSLVSLRVLKLDGNMFQWSIPPG--LLNCQSLVTVDLSMNQ 159
V L+ N G + + L SL +L L N + I P LN + +DL+ N+
Sbjct: 107 VLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIK-KIQPASFFLNMRRFHVLDLTFNK 165
Query: 160 LNGSLPDGF----GAAFPKLKSLNLAGNEIKGRDTHFAGLK---------SITNLNISGN 206
+ + G F L+ L+ ++ + ++ G + SIT L++SGN
Sbjct: 166 VKSICEEDLLNFQGKHFTLLR---LSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGN 222
Query: 207 LFQGSVMGVFLESLEVIDLR----SNQFQ--GHISQVQFNSSYNW-------SRLVYVDL 253
F+ S+ F +++ ++ SN + F N+ S + DL
Sbjct: 223 GFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDL 282
Query: 254 SENQLSGEIFHNFSQAQNLKHLSLAYNRFTRQEFPQIGTLLGLEHLNLSRTSLIGDIPSE 313
S++++ + FS +L+ L+LA N + + L L+ L L T+ + +P
Sbjct: 283 SKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLKELALD-TNQLKSVPDG 341
Query: 314 IL-QLSSLHTLDLSMNHLTGQIPTV 337
I +L+SL + L N P +
Sbjct: 342 IFDRLTSLQKIWLHTNPWDCSCPRI 366
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 59/134 (44%), Gaps = 25/134 (18%)
Query: 644 ARALAFLHHGCSPPIIHRDIKASSVYLDM-------------NLEPRLSDFGLAKIFGNG 690
A +A LH S IIHRD+K ++ + NL +SDFGL K +G
Sbjct: 143 ASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG 199
Query: 691 -----LDEEIARGSPGYIPPEFAQPDSDFPTPKS-DVYCYGVVLLELIT-GKKPLGDDYP 743
+ G+ G+ PE + + +S D++ G V +++ GK P GD Y
Sbjct: 200 QXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKY- 258
Query: 744 EEKEGNLVSWVRGL 757
+E N++ + L
Sbjct: 259 -SRESNIIRGIFSL 271
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 96/239 (40%), Gaps = 51/239 (21%)
Query: 508 SNFDRGTLLAEGKFGPVY--RGFLPGGIHVAVKVLVHGSTL-TDQEAARELEYLGRIKHP 564
NF + + EG +G VY R L G + K+ + T A RE+ L + HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 565 NLVPLTGYCIAGDQRIAIYDYMENGNLQNL-----LHDLPLGVQXXXXXXXXXXXXXXXN 619
N+V L ++ +++++ +L+ L +PL
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHVHQ-DLKTFMDASALTGIPLP------------------ 102
Query: 620 SIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLS 679
L+ ++ F+ + LAF H S ++HRD+K ++ ++ +L+
Sbjct: 103 ---------LIKSYLFQ------LLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLA 144
Query: 680 DFGLAKIFG---NGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
DFGLA+ FG E+ + Y PE + T D++ G + E++T +
Sbjct: 145 DFGLARAFGVPVRTYTHEVV--TLWYRAPEILLGCKYYST-AVDIWSLGCIFAEMVTRR 200
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 21/100 (21%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEP-RLSDFGLAKIFGNGLDEEIARGSPG-- 701
R+LA++H S I HRDIK ++ LD + +L DFG AK ++ RG P
Sbjct: 138 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--------QLVRGEPNVS 186
Query: 702 ------YIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
Y PE +D+ T DV+ G VL EL+ G+
Sbjct: 187 YICSRYYRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQ 225
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 21/100 (21%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEP-RLSDFGLAKIFGNGLDEEIARGSPG-- 701
R+LA++H S I HRDIK ++ LD + +L DFG AK ++ RG P
Sbjct: 161 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--------QLVRGEPNVS 209
Query: 702 ------YIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
Y PE +D+ T DV+ G VL EL+ G+
Sbjct: 210 YICSRYYRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQ 248
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 21/100 (21%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEP-RLSDFGLAKIFGNGLDEEIARGSPG-- 701
R+LA++H S I HRDIK ++ LD + +L DFG AK ++ RG P
Sbjct: 167 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--------QLVRGEPNVS 215
Query: 702 ------YIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
Y PE +D+ T DV+ G VL EL+ G+
Sbjct: 216 YICSRYYRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQ 254
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 21/100 (21%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEP-RLSDFGLAKIFGNGLDEEIARGSPG-- 701
R+LA++H S I HRDIK ++ LD + +L DFG AK ++ RG P
Sbjct: 171 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--------QLVRGEPNVS 219
Query: 702 ------YIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
Y PE +D+ T DV+ G VL EL+ G+
Sbjct: 220 YICSRYYRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQ 258
>pdb|2Z7X|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 549
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 50/100 (50%), Gaps = 1/100 (1%)
Query: 39 GLSGSVPDTTIGKLSKLQSLDLSENNITALP-SDLWSLGSLKSLNLSYNRISGSLPSNIG 97
G SGS+ G ++SLDLS N IT + SDL +L++L L+ N I+ +
Sbjct: 12 GSSGSLNSIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFS 71
Query: 98 NFGLLEVFDLSNNNFSGEIPAAISSLVSLRVLKLDGNMFQ 137
+ G LE DLS N S + L SL L L GN ++
Sbjct: 72 SLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK 111
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 21/100 (21%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEP-RLSDFGLAKIFGNGLDEEIARGSPG-- 701
R+LA++H S I HRDIK ++ LD + +L DFG AK ++ RG P
Sbjct: 169 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--------QLVRGEPNVS 217
Query: 702 ------YIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
Y PE +D+ T DV+ G VL EL+ G+
Sbjct: 218 YICSRYYRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQ 256
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEP-RLSDFGLAKIFGNGLDEEIARGSPGYI 703
R+LA++H S I HRDIK ++ LD + +L DFG AK G S Y
Sbjct: 145 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 201
Query: 704 PPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE +D+ T DV+ G VL EL+ G+
Sbjct: 202 APELIFGATDY-TSSIDVWSAGCVLAELLLGQ 232
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEP-RLSDFGLAKIFGNGLDEEIARGSPGYI 703
R+LA++H S I HRDIK ++ LD + +L DFG AK G S Y
Sbjct: 152 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 208
Query: 704 PPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE +D+ T DV+ G VL EL+ G+
Sbjct: 209 APELIFGATDY-TSSIDVWSAGCVLAELLLGQ 239
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 49/115 (42%), Gaps = 23/115 (20%)
Query: 633 WRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLD 692
WR +I AL+++H S IIHR++K ++++D + ++ DFGLAK LD
Sbjct: 119 WRLFRQIL----EALSYIH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLD 171
Query: 693 ---------------EEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELI 732
A G+ Y+ E + K D Y G++ E I
Sbjct: 172 ILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHY-NEKIDXYSLGIIFFEXI 225
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 652 HGCSPPIIHRDIKASSVYLDMNL-EPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQP 710
H C ++HRDIK ++ +D+N E +L DFG + + + + G+ Y PPE+ +
Sbjct: 174 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-GTRVYSPPEWIRY 230
Query: 711 DSDFPTPKSDVYCYGVVLLELITGKKPLGDD 741
+ + V+ G++L +++ G P D
Sbjct: 231 HR-YHGRSAAVWSLGILLYDMVCGDIPFEHD 260
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEP-RLSDFGLAKIFGNGLDEEIARGSPGYI 703
R+LA++H S I HRDIK ++ LD + +L DFG AK G S Y
Sbjct: 145 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 201
Query: 704 PPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE +D+ T DV+ G VL EL+ G+
Sbjct: 202 APELIFGATDY-TSSIDVWSAGCVLAELLLGQ 232
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 652 HGCSPPIIHRDIKASSVYLDMNL-EPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQP 710
H C ++HRDIK ++ +D+N E +L DFG + + + + G+ Y PPE+ +
Sbjct: 130 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-GTRVYSPPEWIRY 186
Query: 711 DSDFPTPKSDVYCYGVVLLELITGKKPLGDD 741
+ + V+ G++L +++ G P D
Sbjct: 187 HR-YHGRSAAVWSLGILLYDMVCGDIPFEHD 216
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEP-RLSDFGLAKIFGNGLDEEIARGSPGYI 703
R+LA++H S I HRDIK ++ LD + +L DFG AK G S Y
Sbjct: 141 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 197
Query: 704 PPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE +D+ T DV+ G VL EL+ G+
Sbjct: 198 APELIFGATDY-TSSIDVWSAGCVLAELLLGQ 228
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 18/107 (16%)
Query: 639 IALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIA-- 696
I + A A+ FLH S ++HRD+K S+++ M+ ++ DFGL +E+
Sbjct: 169 IFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 225
Query: 697 -----------RGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELI 732
G+ Y+ PE Q + + K D++ G++L EL+
Sbjct: 226 PMPAYATHXGQVGTKLYMSPE--QIHGNNYSHKVDIFSLGLILFELL 270
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 652 HGCSPPIIHRDIKASSVYLDMNL-EPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQP 710
H C ++HRDIK ++ +D+N E +L DFG + + + + G+ Y PPE+ +
Sbjct: 127 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-GTRVYSPPEWIRY 183
Query: 711 DSDFPTPKSDVYCYGVVLLELITGKKPLGDD 741
+ + V+ G++L +++ G P D
Sbjct: 184 HR-YHGRSAAVWSLGILLYDMVCGDIPFEHD 213
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 103/272 (37%), Gaps = 66/272 (24%)
Query: 477 VADVKHANSVQVVIFEKPLLNITFADLLSATSNFDRGTLLAEGKFGPVYRG-FLPGGIHV 535
V++ K A V FEK L R L EG FG V + P G +
Sbjct: 4 VSEKKPATEVDPTHFEKRFLK--------------RIRDLGEGHFGKVELCRYDPEGDNT 49
Query: 536 AVKVLVH-------GSTLTDQEAARELEYLGRIKHPNLVPLTGYCI--AGDQRIAIYDYM 586
+V V G+ + D +E+E L + H N+V G C G+ I +++
Sbjct: 50 GEQVAVKSLKPESGGNHIAD--LKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFL 107
Query: 587 ENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARA 646
+G+L+ L N I + + K A+ +
Sbjct: 108 PSGSLKEYL-------------------PKNKNKI----------NLKQQLKYAVQICKG 138
Query: 647 LAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIA---RGSP--G 701
+ +L S +HRD+ A +V ++ + ++ DFGL K + R SP
Sbjct: 139 MDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFW 195
Query: 702 YIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT 733
Y P Q S F SDV+ +GV L EL+T
Sbjct: 196 YAPECLMQ--SKFYIA-SDVWSFGVTLHELLT 224
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 652 HGCSPPIIHRDIKASSVYLDMNL-EPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQP 710
H C ++HRDIK ++ +D+N E +L DFG + + + + G+ Y PPE+ +
Sbjct: 127 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-GTRVYSPPEWIRY 183
Query: 711 DSDFPTPKSDVYCYGVVLLELITGKKPLGDD 741
+ + V+ G++L +++ G P D
Sbjct: 184 HR-YHGRSAAVWSLGILLYDMVCGDIPFEHD 213
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 9/97 (9%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFG---NGLDEEIARGSPG 701
+ L F H S ++HRD+K ++ ++ N E +L+DFGLA+ FG E+ +
Sbjct: 112 KGLGFCH---SRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV--TLW 166
Query: 702 YIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
Y PP+ + T D++ G + EL +PL
Sbjct: 167 YRPPDVLFGAKLYST-SIDMWSAGCIFAELANAARPL 202
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 21/100 (21%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEP-RLSDFGLAKIFGNGLDEEIARGSPG-- 701
R+LA++H S I HRDIK ++ LD + +L DFG AK ++ RG P
Sbjct: 146 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--------QLVRGEPNVS 194
Query: 702 ------YIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
Y PE +D+ T DV+ G VL EL+ G+
Sbjct: 195 YICSRYYRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQ 233
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 652 HGCSPPIIHRDIKASSVYLDMNL-EPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQP 710
H C ++HRDIK ++ +D+N E +L DFG + + + + G+ Y PPE+ +
Sbjct: 174 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-GTRVYSPPEWIRY 230
Query: 711 DSDFPTPKSDVYCYGVVLLELITGKKPLGDD 741
+ + V+ G++L +++ G P D
Sbjct: 231 HR-YHGRSAAVWSLGILLYDMVCGDIPFEHD 260
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEP-RLSDFGLAKIFGNGLDEEIARGSPGYI 703
R+LA++H S I HRDIK ++ LD + +L DFG AK G S Y
Sbjct: 134 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 190
Query: 704 PPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE +D+ T DV+ G VL EL+ G+
Sbjct: 191 APELIFGATDY-TSSIDVWSAGCVLAELLLGQ 221
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEP-RLSDFGLAKIFGNGLDEEIARGSPGYI 703
R+LA++H S I HRDIK ++ LD + +L DFG AK G S Y
Sbjct: 133 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 189
Query: 704 PPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE +D+ T DV+ G VL EL+ G+
Sbjct: 190 APELIFGATDY-TSSIDVWSAGCVLAELLLGQ 220
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 652 HGCSPPIIHRDIKASSVYLDMNL-EPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQP 710
H C ++HRDIK ++ +D+N E +L DFG + + + + G+ Y PPE+ +
Sbjct: 159 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-GTRVYSPPEWIRY 215
Query: 711 DSDFPTPKSDVYCYGVVLLELITGKKPLGDD 741
+ + V+ G++L +++ G P D
Sbjct: 216 HR-YHGRSAAVWSLGILLYDMVCGDIPFEHD 245
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEP-RLSDFGLAKIFGNGLDEEIARGSPGYI 703
R+LA++H S I HRDIK ++ LD + +L DFG AK G S Y
Sbjct: 137 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 193
Query: 704 PPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE +D+ T DV+ G VL EL+ G+
Sbjct: 194 APELIFGATDY-TSSIDVWSAGCVLAELLLGQ 224
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEP-RLSDFGLAKIFGNGLDEEIARGSPGYI 703
R+LA++H S I HRDIK ++ LD + +L DFG AK G S Y
Sbjct: 133 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 189
Query: 704 PPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE +D+ T DV+ G VL EL+ G+
Sbjct: 190 APELIFGATDY-TSSIDVWSAGCVLAELLLGQ 220
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEP-RLSDFGLAKIFGNGLDEEIARGSPGYI 703
R+LA++H S I HRDIK ++ LD + +L DFG AK G S Y
Sbjct: 133 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 189
Query: 704 PPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE +D+ T DV+ G VL EL+ G+
Sbjct: 190 APELIFGATDY-TSSIDVWSAGCVLAELLLGQ 220
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 652 HGCSPPIIHRDIKASSVYLDMNL-EPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQP 710
H C ++HRDIK ++ +D+N E +L DFG + + + + G+ Y PPE+ +
Sbjct: 131 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-GTRVYSPPEWIRY 187
Query: 711 DSDFPTPKSDVYCYGVVLLELITGKKPLGDD 741
+ + V+ G++L +++ G P D
Sbjct: 188 HR-YHGRSAAVWSLGILLYDMVCGDIPFEHD 217
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 652 HGCSPPIIHRDIKASSVYLDMNL-EPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQP 710
H C ++HRDIK ++ +D+N E +L DFG + + + + G+ Y PPE+ +
Sbjct: 160 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-GTRVYSPPEWIRY 216
Query: 711 DSDFPTPKSDVYCYGVVLLELITGKKPLGDD 741
+ + V+ G++L +++ G P D
Sbjct: 217 HR-YHGRSAAVWSLGILLYDMVCGDIPFEHD 246
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 652 HGCSPPIIHRDIKASSVYLDMNL-EPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQP 710
H C ++HRDIK ++ +D+N E +L DFG + + + + G+ Y PPE+ +
Sbjct: 160 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-GTRVYSPPEWIRY 216
Query: 711 DSDFPTPKSDVYCYGVVLLELITGKKPLGDD 741
+ + V+ G++L +++ G P D
Sbjct: 217 HR-YHGRSAAVWSLGILLYDMVCGDIPFEHD 246
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 96/239 (40%), Gaps = 51/239 (21%)
Query: 508 SNFDRGTLLAEGKFGPVY--RGFLPGGIHVAVKVLVHGSTL-TDQEAARELEYLGRIKHP 564
NF + + EG +G VY R L G + K+ + T A RE+ L + HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 565 NLVPLTGYCIAGDQRIAIYDYMENGNLQNL-----LHDLPLGVQXXXXXXXXXXXXXXXN 619
N+V L ++ +++++ +L+ L +PL
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLP------------------ 103
Query: 620 SIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLS 679
L+ ++ F+ + L+F H S ++HRD+K ++ ++ +L+
Sbjct: 104 ---------LIKSYLFQ------LLQGLSFCH---SHRVLHRDLKPQNLLINTEGAIKLA 145
Query: 680 DFGLAKIFG---NGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
DFGLA+ FG E+ + Y PE + T D++ G + E++T +
Sbjct: 146 DFGLARAFGVPVRTYTHEVV--TLWYRAPEILLGCKYYST-AVDIWSLGCIFAEMVTRR 201
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 652 HGCSPPIIHRDIKASSVYLDMNL-EPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQP 710
H C ++HRDIK ++ +D+N E +L DFG + + + + G+ Y PPE+ +
Sbjct: 159 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-GTRVYSPPEWIRY 215
Query: 711 DSDFPTPKSDVYCYGVVLLELITGKKPLGDD 741
+ + V+ G++L +++ G P D
Sbjct: 216 HR-YHGRSAAVWSLGILLYDMVCGDIPFEHD 245
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 652 HGCSPPIIHRDIKASSVYLDMNL-EPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQP 710
H C ++HRDIK ++ +D+N E +L DFG + + + + G+ Y PPE+ +
Sbjct: 160 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-GTRVYSPPEWIRY 216
Query: 711 DSDFPTPKSDVYCYGVVLLELITGKKPLGDD 741
+ + V+ G++L +++ G P D
Sbjct: 217 HR-YHGRSAAVWSLGILLYDMVCGDIPFEHD 246
>pdb|2Z80|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
pdb|2Z80|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 353
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 50/100 (50%), Gaps = 1/100 (1%)
Query: 39 GLSGSVPDTTIGKLSKLQSLDLSENNITALP-SDLWSLGSLKSLNLSYNRISGSLPSNIG 97
G SGS+ G ++SLDLS N IT + SDL +L++L L+ N I+ +
Sbjct: 38 GSSGSLNSIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFS 97
Query: 98 NFGLLEVFDLSNNNFSGEIPAAISSLVSLRVLKLDGNMFQ 137
+ G LE DLS N S + L SL L L GN ++
Sbjct: 98 SLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK 137
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 8/92 (8%)
Query: 658 IIHRDIKASSVYLDMNLEP----RLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSD 713
I+H D+K ++ L ++ P ++ DFG+++ G+ + G+P Y+ PE D
Sbjct: 152 IVHLDLKPQNILLS-SIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDP- 209
Query: 714 FPTPKSDVYCYGVVLLELITGKKP-LGDDYPE 744
T +D++ G++ L+T P +G+D E
Sbjct: 210 -ITTATDMWNIGIIAYMLLTHTSPFVGEDNQE 240
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 652 HGCSPPIIHRDIKASSVYLDMNL-EPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQP 710
H C ++HRDIK ++ +D+N E +L DFG + + + + G+ Y PPE+ +
Sbjct: 160 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-GTRVYSPPEWIRY 216
Query: 711 DSDFPTPKSDVYCYGVVLLELITGKKPLGDD 741
+ + V+ G++L +++ G P D
Sbjct: 217 HR-YHGRSAAVWSLGILLYDMVCGDIPFEHD 246
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 652 HGCSPPIIHRDIKASSVYLDMNL-EPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQP 710
H C ++HRDIK ++ +D+N E +L DFG + + + + G+ Y PPE+ +
Sbjct: 159 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-GTRVYSPPEWIRY 215
Query: 711 DSDFPTPKSDVYCYGVVLLELITGKKPLGDD 741
+ + V+ G++L +++ G P D
Sbjct: 216 HR-YHGRSAAVWSLGILLYDMVCGDIPFEHD 245
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 652 HGCSPPIIHRDIKASSVYLDMNL-EPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQP 710
H C ++HRDIK ++ +D+N E +L DFG + + + + G+ Y PPE+ +
Sbjct: 132 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-GTRVYSPPEWIRY 188
Query: 711 DSDFPTPKSDVYCYGVVLLELITGKKPLGDD 741
+ + V+ G++L +++ G P D
Sbjct: 189 HR-YHGRSAAVWSLGILLYDMVCGDIPFEHD 218
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 652 HGCSPPIIHRDIKASSVYLDMNL-EPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQP 710
H C ++HRDIK ++ +D+N E +L DFG + + + + G+ Y PPE+ +
Sbjct: 174 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-GTRVYSPPEWIRY 230
Query: 711 DSDFPTPKSDVYCYGVVLLELITGKKPLGDD 741
+ + V+ G++L +++ G P D
Sbjct: 231 HR-YHGRSAAVWSLGILLYDMVCGDIPFEHD 260
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 55/109 (50%), Gaps = 11/109 (10%)
Query: 649 FLHHGCSPPIIHRDIKASSVYL-DMNL---EPRLSDFGLAKIFGNGLDEEIARGSPGYIP 704
+LH + I H D+K ++ L D N+ +L DFGLA +G++ + G+P ++
Sbjct: 130 YLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVA 186
Query: 705 PEFAQPDSDFPTP-KSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVS 752
PE + P ++D++ GV+ L++G P D +E N+ S
Sbjct: 187 PEIVNYE---PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITS 232
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 652 HGCSPPIIHRDIKASSVYLDMNL-EPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQP 710
H C ++HRDIK ++ +D+N E +L DFG + + + + G+ Y PPE+ +
Sbjct: 159 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-GTRVYSPPEWIRY 215
Query: 711 DSDFPTPKSDVYCYGVVLLELITGKKPLGDD 741
+ + V+ G++L +++ G P D
Sbjct: 216 HR-YHGRSAAVWSLGILLYDMVCGDIPFEHD 245
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 652 HGCSPPIIHRDIKASSVYLDMNL-EPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQP 710
H C ++HRDIK ++ +D+N E +L DFG + + + + G+ Y PPE+ +
Sbjct: 132 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-GTRVYSPPEWIRY 188
Query: 711 DSDFPTPKSDVYCYGVVLLELITGKKPLGDD 741
+ + V+ G++L +++ G P D
Sbjct: 189 HR-YHGRSAAVWSLGILLYDMVCGDIPFEHD 218
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 652 HGCSPPIIHRDIKASSVYLDMNL-EPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQP 710
H C ++HRDIK ++ +D+N E +L DFG + + + + G+ Y PPE+ +
Sbjct: 131 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-GTRVYSPPEWIRY 187
Query: 711 DSDFPTPKSDVYCYGVVLLELITGKKPLGDD 741
+ + V+ G++L +++ G P D
Sbjct: 188 HR-YHGRSAAVWSLGILLYDMVCGDIPFEHD 217
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 652 HGCSPPIIHRDIKASSVYLDMNL-EPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQP 710
H C ++HRDIK ++ +D+N E +L DFG + + + + G+ Y PPE+ +
Sbjct: 132 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-GTRVYSPPEWIRY 188
Query: 711 DSDFPTPKSDVYCYGVVLLELITGKKPLGDD 741
+ + V+ G++L +++ G P D
Sbjct: 189 HR-YHGRSAAVWSLGILLYDMVCGDIPFEHD 218
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 21/100 (21%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEP-RLSDFGLAKIFGNGLDEEIARGSPG-- 701
R+LA++H S I HRDIK ++ LD + +L DFG AK ++ RG P
Sbjct: 133 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--------QLVRGEPNVS 181
Query: 702 ------YIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
Y PE +D+ T DV+ G VL EL+ G+
Sbjct: 182 YICSRYYRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQ 220
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 104/255 (40%), Gaps = 48/255 (18%)
Query: 510 FDRGTLLAEGKFGPVYRGFLPG-GIHVAVKVLVHGST------LTDQEAARELEYLGRIK 562
+D G L G+F V + G+ A K + + + +E RE+ L ++
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVL 73
Query: 563 HPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQ 622
HPN++ L + I + + G L + L + +
Sbjct: 74 HPNIITLHDVYENRTDVVLILELVSGGELFDFL------------------------AQK 109
Query: 623 NVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYL-DMNL---EPRL 678
SE T+ F +I G + +LH + I H D+K ++ L D N+ +L
Sbjct: 110 ESLSEEEATS--FIKQILDG----VNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKL 160
Query: 679 SDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTP-KSDVYCYGVVLLELITGKKP 737
DFGLA +G++ + G+P ++ PE + P ++D++ GV+ L++G P
Sbjct: 161 IDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYE---PLGLEADMWSIGVITYILLSGASP 217
Query: 738 LGDDYPEEKEGNLVS 752
D +E N+ +
Sbjct: 218 FLGDTKQETLANITA 232
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 652 HGCSPPIIHRDIKASSVYLDMNL-EPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQP 710
H C ++HRDIK ++ +D+N E +L DFG + + + + G+ Y PPE+ +
Sbjct: 179 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-GTRVYSPPEWIRY 235
Query: 711 DSDFPTPKSDVYCYGVVLLELITGKKPLGDD 741
+ + V+ G++L +++ G P D
Sbjct: 236 HR-YHGRSAAVWSLGILLYDMVCGDIPFEHD 265
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 103/255 (40%), Gaps = 52/255 (20%)
Query: 510 FDRGTLLAEGKFGPVYRGFLPG-GIHVAVKVLVHGST------LTDQEAARELEYLGRIK 562
+D G L G+F V + G+ A K + T ++ ++ RE+ L I+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 563 HPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQ 622
HPN++ L I I + + G L + L + + +
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAE-------------------KESLTE 113
Query: 623 NVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYL-DMNL-EPRLS- 679
+E F +I G + +LH S I H D+K ++ L D N+ +PR+
Sbjct: 114 EEATE-------FLKQILNG----VYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 680 -DFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTP---KSDVYCYGVVLLELITGK 735
DFGLA G + + G+P ++ PE + P ++D++ GV+ L++G
Sbjct: 160 IDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE-----PLGLEADMWSIGVITYILLSGA 214
Query: 736 KPLGDDYPEEKEGNL 750
P D +E N+
Sbjct: 215 SPFLGDTKQETLANV 229
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 652 HGCSPPIIHRDIKASSVYLDMNL-EPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQP 710
H C ++HRDIK ++ +D+N E +L DFG + + + + G+ Y PPE+ +
Sbjct: 154 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-GTRVYSPPEWIRY 210
Query: 711 DSDFPTPKSDVYCYGVVLLELITGKKPLGDD 741
+ + V+ G++L +++ G P D
Sbjct: 211 HR-YHGRSAAVWSLGILLYDMVCGDIPFEHD 240
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIP 704
R L ++H S IIHRD+K S++ ++ + E ++ DFGL + + + +A + Y
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVA--TRWYRA 190
Query: 705 PEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE + D++ G ++ EL+TG+
Sbjct: 191 PEIMLNWMHY-NQTVDIWSVGCIMAELLTGR 220
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 55/109 (50%), Gaps = 11/109 (10%)
Query: 649 FLHHGCSPPIIHRDIKASSVYL-DMNL---EPRLSDFGLAKIFGNGLDEEIARGSPGYIP 704
+LH + I H D+K ++ L D N+ +L DFGLA +G++ + G+P ++
Sbjct: 130 YLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVA 186
Query: 705 PEFAQPDSDFPTP-KSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVS 752
PE + P ++D++ GV+ L++G P D +E N+ +
Sbjct: 187 PEIVNYE---PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITA 232
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 92/224 (41%), Gaps = 41/224 (18%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKV--LVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYC 573
+ EG +G VY+ G A+K L RE+ L +KH N+V L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 574 IAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTW 633
+ + ++++++ +L+ LL D+ G +++V ++ L
Sbjct: 70 HTKKRLVLVFEHLDQ-DLKKLL-DVCEG------------------GLESVTAKSFL--- 106
Query: 634 RFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFG---NG 690
L +A+ H ++HRD+K ++ ++ E +++DFGLA+ FG
Sbjct: 107 -------LQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRK 156
Query: 691 LDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITG 734
EI + Y P+ + T D++ G + E++ G
Sbjct: 157 YTHEIV--TLWYRAPDVLMGSKKYST-TIDIWSVGCIFAEMVNG 197
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 658 IIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPE-FAQPDSDFPT 716
IIHRD+K ++ LD + ++DF +A + G+ Y+ PE F+ +
Sbjct: 136 IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYS 195
Query: 717 PKSDVYCYGVVLLELITGKKP 737
D + GV EL+ G++P
Sbjct: 196 FAVDWWSLGVTAYELLRGRRP 216
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 106/264 (40%), Gaps = 74/264 (28%)
Query: 515 LLAEGKFGPVYRGFLPGGIHVAVKVLVHGST---LTDQEAARELEYLGRIKHPNLVPLTG 571
L+ G++G VY+G L VAVKV + + ++ R + ++H N+
Sbjct: 20 LIGRGRYGAVYKGSLDER-PVAVKVFSFANRQNFINEKNIYR----VPLMEHDNIARF-- 72
Query: 572 YCIAGDQRIA---------IYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQ 622
I GD+R+ + +Y NG+L L
Sbjct: 73 --IVGDERVTADGRMEYLLVMEYYPNGSLXKYL--------------------------- 103
Query: 623 NVGSEGLLTTWRFRHKIALGTARALAFLH------HGCSPPIIHRDIKASSVYLDMNLEP 676
++ + +++ R H + R LA+LH P I HRD+ + +V + +
Sbjct: 104 SLHTSDWVSSCRLAHSVT----RGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTC 159
Query: 677 RLSDFGLA-KIFGNGL----DEEIAR----GSPGYIPPEFAQ-----PDSDFPTPKSDVY 722
+SDFGL+ ++ GN L +E+ A G+ Y+ PE + D + + D+Y
Sbjct: 160 VISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMY 219
Query: 723 CYGVVLLELITGKKPL--GDDYPE 744
G++ E+ L G+ PE
Sbjct: 220 ALGLIYWEIFMRCTDLFPGESVPE 243
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 652 HGCSPPIIHRDIKASSVYLDMNL-EPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQP 710
H C ++HRDIK ++ +D+N E +L DFG + + + + G+ Y PPE+ +
Sbjct: 146 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-GTRVYSPPEWIRY 202
Query: 711 DSDFPTPKSDVYCYGVVLLELITGKKPLGDD 741
+ + V+ G++L +++ G P D
Sbjct: 203 HR-YHGRSAAVWSLGILLYDMVCGDIPFEHD 232
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 652 HGCSPPIIHRDIKASSVYLDMNL-EPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQP 710
H C ++HRDIK ++ +D+N E +L DFG + + + + G+ Y PPE+ +
Sbjct: 147 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-GTRVYSPPEWIRY 203
Query: 711 DSDFPTPKSDVYCYGVVLLELITGKKPLGDD 741
+ + V+ G++L +++ G P D
Sbjct: 204 HR-YHGRSAAVWSLGILLYDMVCGDIPFEHD 233
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 652 HGCSPPIIHRDIKASSVYLDMNL-EPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQP 710
H C ++HRDIK ++ +D+N E +L DFG + + + + G+ Y PPE+ +
Sbjct: 146 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-GTRVYSPPEWIRY 202
Query: 711 DSDFPTPKSDVYCYGVVLLELITGKKPLGDD 741
+ + V+ G++L +++ G P D
Sbjct: 203 HR-YHGRSAAVWSLGILLYDMVCGDIPFEHD 232
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 55/109 (50%), Gaps = 11/109 (10%)
Query: 649 FLHHGCSPPIIHRDIKASSVYL-DMNL---EPRLSDFGLAKIFGNGLDEEIARGSPGYIP 704
+LH + I H D+K ++ L D N+ +L DFGLA +G++ + G+P ++
Sbjct: 130 YLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVA 186
Query: 705 PEFAQPDSDFPTP-KSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVS 752
PE + P ++D++ GV+ L++G P D +E N+ +
Sbjct: 187 PEIVNYE---PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITA 232
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNL-EPRLSDFGLAKIFGNGLDEEIARGSPGYI 703
+ L + H + ++HRDIK ++ +D+N E +L DFG + + + + G+ Y
Sbjct: 118 QVLEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-GTRVYS 176
Query: 704 PPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDD 741
PPE+ + + + V+ G++L +++ G P D
Sbjct: 177 PPEWIRYHR-YHGRSAAVWSLGILLYDMVCGDIPFEHD 213
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 652 HGCSPPIIHRDIKASSVYLDMNL-EPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQP 710
H C ++HRDIK ++ +D+N E +L DFG + + + + G+ Y PPE+ +
Sbjct: 147 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-GTRVYSPPEWIRY 203
Query: 711 DSDFPTPKSDVYCYGVVLLELITGKKPLGDD 741
+ + V+ G++L +++ G P D
Sbjct: 204 HR-YHGRSAAVWSLGILLYDMVCGDIPFEHD 233
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 652 HGCSPPIIHRDIKASSVYLDMNL-EPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQP 710
H C ++HRDIK ++ +D+N E +L DFG + + + + G+ Y PPE+ +
Sbjct: 166 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-GTRVYSPPEWIRY 222
Query: 711 DSDFPTPKSDVYCYGVVLLELITGKKPLGDD 741
+ + V+ G++L +++ G P D
Sbjct: 223 HR-YHGRSAAVWSLGILLYDMVCGDIPFEHD 252
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 652 HGCSPPIIHRDIKASSVYLDMNL-EPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQP 710
H C ++HRDIK ++ +D+N E +L DFG + + + + G+ Y PPE+ +
Sbjct: 147 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-GTRVYSPPEWIRY 203
Query: 711 DSDFPTPKSDVYCYGVVLLELITGKKPLGDD 741
+ + V+ G++L +++ G P D
Sbjct: 204 HR-YHGRSAAVWSLGILLYDMVCGDIPFEHD 233
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 103/255 (40%), Gaps = 52/255 (20%)
Query: 510 FDRGTLLAEGKFGPVYRGFLPG-GIHVAVKVLVHGST------LTDQEAARELEYLGRIK 562
+D G L G+F V + G+ A K + T ++ ++ RE+ L I+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 563 HPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQ 622
HPN++ L I I + + G L + L + + +
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAE-------------------KESLTE 113
Query: 623 NVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYL-DMNL-EPRLS- 679
+E F +I G + +LH S I H D+K ++ L D N+ +PR+
Sbjct: 114 EEATE-------FLKQILNG----VYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 680 -DFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTP---KSDVYCYGVVLLELITGK 735
DFGLA G + + G+P ++ PE + P ++D++ GV+ L++G
Sbjct: 160 IDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE-----PLGLEADMWSIGVITYILLSGA 214
Query: 736 KPLGDDYPEEKEGNL 750
P D +E N+
Sbjct: 215 SPFLGDTKQETLANV 229
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 658 IIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARG-SPGYIPPEFAQPDS---- 712
+HRD+ A +V L ++SDFGL+K DE + + G P ++ P+
Sbjct: 126 FVHRDLAARNVLLVTQHYAKISDFGLSKAL--RADENYYKAQTHGKWPVKWYAPECINYY 183
Query: 713 DFPTPKSDVYCYGVVLLELIT-GKKP 737
F + KSDV+ +GV++ E + G+KP
Sbjct: 184 KF-SSKSDVWSFGVLMWEAFSYGQKP 208
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 103/273 (37%), Gaps = 50/273 (18%)
Query: 491 FEKPLLNITFADLLSATSNFDRGTLLAEGKFGPVY-RGFLPGGIHVAVKVLVHGSTLTDQ 549
+E P N D F+R L G FG V + G H A+K+L + +
Sbjct: 30 WENPAQNTAHLD------QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLK 83
Query: 550 EAAR---ELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXX 606
E E L + P LV L + + +N NL ++ P G
Sbjct: 84 EIEHTLNEKRILQAVNFPFLVKLE------------FSFKDNSNLYMVMEYAPGG----- 126
Query: 607 XXXXXXXXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKAS 666
+ ++ +G + +I L +LH S +I+RD+K
Sbjct: 127 ---------EMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH---SLDLIYRDLKPE 170
Query: 667 SVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGV 726
++ +D +++DFGLAK G + G+P Y+ PE S D + GV
Sbjct: 171 NLMIDQQGYIKVTDFGLAKRV-KGRTWXLC-GTPEYLAPEIIL--SKGYNKAVDWWALGV 226
Query: 727 VLLELITGKKPLGDDYPEEKEGNLVSWVRGLVR 759
++ E+ G P D P + +VS G VR
Sbjct: 227 LIYEMAAGYPPFFADQPIQIYEKIVS---GKVR 256
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 658 IIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARG-SPGYIPPEFAQPDS---- 712
+HRD+ A +V L ++SDFGL+K DE + + G P ++ P+
Sbjct: 128 FVHRDLAARNVLLVTQHYAKISDFGLSKAL--RADENYYKAQTHGKWPVKWYAPECINYY 185
Query: 713 DFPTPKSDVYCYGVVLLELIT-GKKP 737
F + KSDV+ +GV++ E + G+KP
Sbjct: 186 KF-SSKSDVWSFGVLMWEAFSYGQKP 210
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 92/233 (39%), Gaps = 52/233 (22%)
Query: 516 LAEGKFGPV-YRGFLPGGIHVAVKVLVH-------GSTLTDQEAARELEYLGRIKHPNLV 567
L EG FG V + P G + +V V G+ + D +E+E L + H N+V
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIAD--LKKEIEILRNLYHENIV 74
Query: 568 PLTGYCI--AGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVG 625
G C G+ I +++ +G+L+ L N I
Sbjct: 75 KYKGICTEDGGNGIKLIMEFLPSGSLKEYL-------------------PKNKNKI---- 111
Query: 626 SEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAK 685
+ + K A+ + + +L S +HRD+ A +V ++ + ++ DFGL K
Sbjct: 112 ------NLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTK 162
Query: 686 IFGNGLDEEIA---RGSP--GYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT 733
+ R SP Y P Q S F SDV+ +GV L EL+T
Sbjct: 163 AIETDKEXXTVKDDRDSPVFWYAPECLMQ--SKFYIA-SDVWSFGVTLHELLT 212
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 103/253 (40%), Gaps = 48/253 (18%)
Query: 510 FDRGTLLAEGKFGPVYRGFLPG-GIHVAVKVLVHGST------LTDQEAARELEYLGRIK 562
+D G L G+F V + G+ A K + T ++ ++ RE+ L I+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 563 HPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQ 622
HPN++ L I I + + G L + L + + +
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAE-------------------KESLTE 113
Query: 623 NVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYL-DMNL-EPRLS- 679
+E F +I G + +LH S I H D+K ++ L D N+ +PR+
Sbjct: 114 EEATE-------FLKQILNG----VYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 680 -DFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTP-KSDVYCYGVVLLELITGKKP 737
DFGLA G + + G+P ++ PE + P ++D++ GV+ L++G P
Sbjct: 160 IDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE---PLGLEADMWSIGVITYILLSGASP 216
Query: 738 LGDDYPEEKEGNL 750
D +E N+
Sbjct: 217 FLGDTKQETLANV 229
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 103/255 (40%), Gaps = 52/255 (20%)
Query: 510 FDRGTLLAEGKFGPVYRGFLPG-GIHVAVKVLVHGST------LTDQEAARELEYLGRIK 562
+D G L G+F V + G+ A K + T ++ ++ RE+ L I+
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 563 HPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQ 622
HPN++ L I I + + G L + L + + +
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGELFDFLAE-------------------KESLTE 112
Query: 623 NVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYL-DMNL-EPRLS- 679
+E F +I G + +LH S I H D+K ++ L D N+ +PR+
Sbjct: 113 EEATE-------FLKQILNG----VYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKI 158
Query: 680 -DFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTP---KSDVYCYGVVLLELITGK 735
DFGLA G + + G+P ++ PE + P ++D++ GV+ L++G
Sbjct: 159 IDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE-----PLGLEADMWSIGVITYILLSGA 213
Query: 736 KPLGDDYPEEKEGNL 750
P D +E N+
Sbjct: 214 SPFLGDTKQETLANV 228
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 103/255 (40%), Gaps = 52/255 (20%)
Query: 510 FDRGTLLAEGKFGPVYRGFLPG-GIHVAVKVLVHGST------LTDQEAARELEYLGRIK 562
+D G L G+F V + G+ A K + T ++ ++ RE+ L I+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 563 HPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQ 622
HPN++ L I I + + G L + L + + +
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAE-------------------KESLTE 113
Query: 623 NVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYL-DMNL-EPRLS- 679
+E F +I G + +LH S I H D+K ++ L D N+ +PR+
Sbjct: 114 EEATE-------FLKQILNG----VYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 680 -DFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTP---KSDVYCYGVVLLELITGK 735
DFGLA G + + G+P ++ PE + P ++D++ GV+ L++G
Sbjct: 160 IDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE-----PLGLEADMWSIGVITYILLSGA 214
Query: 736 KPLGDDYPEEKEGNL 750
P D +E N+
Sbjct: 215 SPFLGDTKQETLANV 229
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 103/255 (40%), Gaps = 52/255 (20%)
Query: 510 FDRGTLLAEGKFGPVYRGFLPG-GIHVAVKVLVHGST------LTDQEAARELEYLGRIK 562
+D G L G+F V + G+ A K + T ++ ++ RE+ L I+
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 563 HPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQ 622
HPN++ L I I + + G L + L + + +
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGELFDFLAE-------------------KESLTE 112
Query: 623 NVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYL-DMNL-EPRLS- 679
+E F +I G + +LH S I H D+K ++ L D N+ +PR+
Sbjct: 113 EEATE-------FLKQILNG----VYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKI 158
Query: 680 -DFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTP---KSDVYCYGVVLLELITGK 735
DFGLA G + + G+P ++ PE + P ++D++ GV+ L++G
Sbjct: 159 IDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE-----PLGLEADMWSIGVITYILLSGA 213
Query: 736 KPLGDDYPEEKEGNL 750
P D +E N+
Sbjct: 214 SPFLGDTKQETLANV 228
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 658 IIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARG-SPGYIPPEFAQPDS---- 712
+HRD+ A +V L ++SDFGL+K DE + + G P ++ P+
Sbjct: 132 FVHRDLAARNVLLVTQHYAKISDFGLSKAL--RADENYYKAQTHGKWPVKWYAPECINYY 189
Query: 713 DFPTPKSDVYCYGVVLLELIT-GKKP 737
F + KSDV+ +GV++ E + G+KP
Sbjct: 190 KF-SSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 658 IIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARG-SPGYIPPEFAQPDS---- 712
+HRD+ A +V L ++SDFGL+K DE + + G P ++ P+
Sbjct: 138 FVHRDLAARNVLLVTQHYAKISDFGLSKAL--RADENYYKAQTHGKWPVKWYAPECINYY 195
Query: 713 DFPTPKSDVYCYGVVLLELIT-GKKP 737
F + KSDV+ +GV++ E + G+KP
Sbjct: 196 KF-SSKSDVWSFGVLMWEAFSYGQKP 220
>pdb|2O6S|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
pdb|2O6S|B Chain B, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
Length = 208
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 153 VDLSMNQLNGSLPDGFGAAFPKLKSLNLAGNEIKG-RDTHFAGLKSITNLNISGNLFQGS 211
+DL N L SLP+G L L L GN+++ + F L S+T LN+S N Q
Sbjct: 33 LDLETNSLK-SLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSL 91
Query: 212 VMGVF--LESLEVIDLRSNQFQ 231
GVF L L+ + L +NQ Q
Sbjct: 92 PNGVFDKLTQLKELALNTNQLQ 113
Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 66/138 (47%), Gaps = 31/138 (22%)
Query: 43 SVPDTTIGKLSKLQSLDLSENNITALPSDLWS-LGSLKSLNLSYNRISGSLPSNIGNFGL 101
S+P+ +L+ L L L N + +LP+ +++ L SL LNLS N++ SLP+
Sbjct: 42 SLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQ-SLPNG------ 94
Query: 102 LEVFDLSNNNFSGEIPAAISSLVSLRVLKLDGNMFQWSIPPGLLN-CQSLVTVDLSMNQL 160
VFD L L+ L L+ N Q S+P G+ + L + L NQL
Sbjct: 95 --VFD---------------KLTQLKELALNTNQLQ-SLPDGVFDKLTQLKDLRLYQNQL 136
Query: 161 NGSLPDGFGAAFPKLKSL 178
S+PDG F +L SL
Sbjct: 137 K-SVPDG---VFDRLTSL 150
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 3/101 (2%)
Query: 43 SVPDTTIGKLSKLQSLDLSENNITALPSDLW-SLGSLKSLNLSYNRISGSLPSNI-GNFG 100
S+P+ KL+ L L+LS N + +LP+ ++ L LK L L+ N++ SLP +
Sbjct: 66 SLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQ-SLPDGVFDKLT 124
Query: 101 LLEVFDLSNNNFSGEIPAAISSLVSLRVLKLDGNMFQWSIP 141
L+ L N L SL+ + L N + + P
Sbjct: 125 QLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 165
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 92/224 (41%), Gaps = 41/224 (18%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKV--LVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYC 573
+ EG +G VY+ G A+K L RE+ L +KH N+V L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 574 IAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTW 633
+ + ++++++ +L+ LL D+ G +++V ++ L
Sbjct: 70 HTKKRLVLVFEHLDQ-DLKKLL-DVCEG------------------GLESVTAKSFL--- 106
Query: 634 RFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFG---NG 690
L +A+ H ++HRD+K ++ ++ E +++DFGLA+ FG
Sbjct: 107 -------LQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRK 156
Query: 691 LDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITG 734
E+ + Y P+ + T D++ G + E++ G
Sbjct: 157 YTHEVV--TLWYRAPDVLMGSKKYST-TIDIWSVGCIFAEMVNG 197
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 103/255 (40%), Gaps = 52/255 (20%)
Query: 510 FDRGTLLAEGKFGPVYRGFLPG-GIHVAVKVLVHGST------LTDQEAARELEYLGRIK 562
+D G L G+F V + G+ A K + T ++ ++ RE+ L I+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 563 HPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQ 622
HPN++ L I I + + G L + L + + +
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAE-------------------KESLTE 113
Query: 623 NVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYL-DMNL-EPRLS- 679
+E F +I G + +LH S I H D+K ++ L D N+ +PR+
Sbjct: 114 EEATE-------FLKQILNG----VYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 680 -DFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTP---KSDVYCYGVVLLELITGK 735
DFGLA G + + G+P ++ PE + P ++D++ GV+ L++G
Sbjct: 160 IDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE-----PLGLEADMWSIGVITYILLSGA 214
Query: 736 KPLGDDYPEEKEGNL 750
P D +E N+
Sbjct: 215 SPFLGDTKQETLANV 229
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 92/224 (41%), Gaps = 41/224 (18%)
Query: 516 LAEGKFGPVYRGFLPGGIHVAVKV--LVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYC 573
+ EG +G VY+ G A+K L RE+ L +KH N+V L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 574 IAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSEGLLTTW 633
+ + ++++++ +L+ LL D+ G +++V ++ L
Sbjct: 70 HTKKRLVLVFEHLDQ-DLKKLL-DVCEG------------------GLESVTAKSFL--- 106
Query: 634 RFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFG---NG 690
L +A+ H ++HRD+K ++ ++ E +++DFGLA+ FG
Sbjct: 107 -------LQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRK 156
Query: 691 LDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITG 734
E+ + Y P+ + T D++ G + E++ G
Sbjct: 157 YTHEVV--TLWYRAPDVLMGSKKYST-TIDIWSVGCIFAEMVNG 197
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 658 IIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARG-SPGYIPPEFAQPDS---- 712
+HRD+ A +V L ++SDFGL+K DE + + G P ++ P+
Sbjct: 132 FVHRDLAARNVLLVTQHYAKISDFGLSKAL--RADENXYKAQTHGKWPVKWYAPECINYY 189
Query: 713 DFPTPKSDVYCYGVVLLELIT-GKKP 737
F + KSDV+ +GV++ E + G+KP
Sbjct: 190 KF-SSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIP 704
R L ++H S IIHRD+K S++ ++ + E ++ FGLA+ + + +A + Y
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVA--TRWYRA 190
Query: 705 PEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE + D++ G ++ EL+TG+
Sbjct: 191 PEIMLNWMHY-NQTVDIWSVGCIMAELLTGR 220
>pdb|4FCG|A Chain A, Structure Of The Leucine-Rich Repeat Domain Of The Type
Iii Effector Xcv3220 (Xopl)
Length = 328
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 32/208 (15%)
Query: 25 SNKQHVTDFLASNSGLSGSVPDTTIGKLSKLQSLDLSENNITALPSDLWSLGSLKSLNLS 84
S+ QH T +GL +PDT + + L++L L+ N + ALP+ + SL L+ L++
Sbjct: 104 SHLQHXT---IDAAGLX-ELPDTX-QQFAGLETLTLARNPLRALPASIASLNRLRELSIR 158
Query: 85 YNRISGSLPSNIGNFGLLEVFDLSNNNFSGEIPAAISSLVSLRVLKLDGNMFQWSIPPGL 144
LP L++ + SGE LV+L+ L+L+ + S+P +
Sbjct: 159 ACPELTELPE-----------PLASTDASGE----HQGLVNLQSLRLEWTGIR-SLPASI 202
Query: 145 LNCQSLVTVDLSMNQLNGSLPDGFGAA---FPKLKSLNLAG-NEIKGRDTHFAGLKSITN 200
N Q+L ++ + + L+ G A PKL+ L+L G ++ F G +
Sbjct: 203 ANLQNLKSLKIRNSPLS-----ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKR 257
Query: 201 LNIS--GNLFQGSVMGVFLESLEVIDLR 226
L + NL + L LE +DLR
Sbjct: 258 LILKDCSNLLTLPLDIHRLTQLEKLDLR 285
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 103/273 (37%), Gaps = 50/273 (18%)
Query: 491 FEKPLLNITFADLLSATSNFDRGTLLAEGKFGPVY-RGFLPGGIHVAVKVLVHGSTLTDQ 549
+E P N D F+R L G FG V + G H A+K+L + +
Sbjct: 30 WENPAQNTAHLD------QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLK 83
Query: 550 EAAR---ELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXX 606
E E L + P LV L + + +N NL ++ P G
Sbjct: 84 EIEHTLNEKRILQAVNFPFLVKLE------------FSFKDNSNLYMVMEYAPGG----- 126
Query: 607 XXXXXXXXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKAS 666
+ ++ +G + +I L +LH S +I+RD+K
Sbjct: 127 ---------EMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH---SLDLIYRDLKPE 170
Query: 667 SVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGV 726
++ +D +++DFGLAK G + G+P Y+ PE S D + GV
Sbjct: 171 NLMIDQQGYIQVTDFGLAKRV-KGRTWXLC-GTPEYLAPEIIL--SKGYNKAVDWWALGV 226
Query: 727 VLLELITGKKPLGDDYPEEKEGNLVSWVRGLVR 759
++ E+ G P D P + +VS G VR
Sbjct: 227 LIYEMAAGYPPFFADQPIQIYEKIVS---GKVR 256
>pdb|3ZYN|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
pdb|3ZYN|B Chain B, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
Length = 321
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 76/192 (39%), Gaps = 28/192 (14%)
Query: 43 SVPDTTIGKLSKLQSLDLSENNITALPSDLWSLGSLKSLNLSYNRISGSLPSNIGNFGLL 102
+VP LSKL+ L L N I ++PS ++NR+ ++G L
Sbjct: 97 TVPTQAFEYLSKLRELWLRNNPIESIPS------------YAFNRVPSLRRLDLGELKRL 144
Query: 103 EVFDLSNNNFSGEIPAAISSLVSLRVLKLDGNMFQWSIPPGLLNCQSLVTVDLSMNQLNG 162
E AA LV+LR L L M P L L ++LS N+L+
Sbjct: 145 EYIS----------EAAFEGLVNLRYLNL--GMCNLKDIPNLTALVRLEELELSGNRLDL 192
Query: 163 SLPDGFGAAFPKLKSLNLAGNEIKGRDTH-FAGLKSITNLNISGNLFQGSVMGVF--LES 219
P F L+ L L ++ + + F LKS+ LN+S N +F L
Sbjct: 193 IRPGSF-QGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHR 251
Query: 220 LEVIDLRSNQFQ 231
LE + L N +
Sbjct: 252 LERVHLNHNPWH 263
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 10/113 (8%)
Query: 647 LAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPE 706
+LH S +I+RD+K ++ +D +++DFG AK G +A G+P Y+ PE
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLA-GTPEYLAPE 208
Query: 707 FAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVR 759
S D + GV++ E+ G P D P + +VS G VR
Sbjct: 209 IIL--SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS---GKVR 256
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIP 704
R L ++H S IIHRD+K S++ ++ + E ++ DF LA+ + + +A + Y
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVA--TRWYRA 190
Query: 705 PEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE + D++ G ++ EL+TG+
Sbjct: 191 PEIMLNWMHY-NQTVDIWSVGCIMAELLTGR 220
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 38.1 bits (87), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 658 IIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARG-SPGYIPPEFAQPDS---- 712
+HRD+ A +V L ++SDFGL+K DE + + G P ++ P+
Sbjct: 146 FVHRDLAARNVLLVTQHYAKISDFGLSKAL--RADENYYKAQTHGKWPVKWYAPECINYY 203
Query: 713 DFPTPKSDVYCYGVVLLELIT-GKKP 737
F + KSDV+ +GV++ E + G+KP
Sbjct: 204 KF-SSKSDVWSFGVLMWEAFSYGQKP 228
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 658 IIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARG-SPGYIPPEFAQPDS---- 712
+HRD+ A +V L ++SDFGL+K DE + + G P ++ P+
Sbjct: 490 FVHRDLAARNVLLVTQHYAKISDFGLSKAL--RADENYYKAQTHGKWPVKWYAPECINYY 547
Query: 713 DFPTPKSDVYCYGVVLLELIT-GKKP 737
F + KSDV+ +GV++ E + G+KP
Sbjct: 548 KF-SSKSDVWSFGVLMWEAFSYGQKP 572
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIP 704
R L ++H S IIHRD+K S++ ++ + E ++ D GLA+ + + +A + Y
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVA--TRWYRA 190
Query: 705 PEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE + D++ G ++ EL+TG+
Sbjct: 191 PEIMLNWMHY-NQTVDIWSVGCIMAELLTGR 220
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 103/255 (40%), Gaps = 52/255 (20%)
Query: 510 FDRGTLLAEGKFGPVYRGFLPG-GIHVAVKVLVHGST------LTDQEAARELEYLGRIK 562
+D G L G+F V + G+ A K + T ++ ++ RE+ L I+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 563 HPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQ 622
HPN++ L I I + + G L + L + + +
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAE-------------------KESLTE 113
Query: 623 NVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYL-DMNL-EPRLS- 679
+E F +I G + +LH S I H D+K ++ L D N+ +PR+
Sbjct: 114 EEATE-------FLKQILNG----VYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 680 -DFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTP---KSDVYCYGVVLLELITGK 735
DFGLA G + + G+P ++ PE + P ++D++ GV+ L++G
Sbjct: 160 IDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE-----PLGLEADMWSIGVITYILLSGA 214
Query: 736 KPLGDDYPEEKEGNL 750
P D +E N+
Sbjct: 215 SPFLGDTKQETLANV 229
>pdb|3M18|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R2.1 In Complex With Hen Egg Lysozyme
Length = 251
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 76/192 (39%), Gaps = 35/192 (18%)
Query: 20 GVVCDSNKQHVTDFLASNSGLSGSVPDTTIGKLSKLQSLDLSENNITALP-SDLWSLGSL 78
G C+ K+ V S + +P T + LDL + L + L L
Sbjct: 9 GCTCNEGKKEVDCQGKSLDSVPSGIPADT-------EKLDLQSTGLATLSDATFRGLTKL 61
Query: 79 KSLNLSYNRI----SGSLP--SNIGNFGL---------LEVFD---------LSNNNFSG 114
LNL YN++ +G + +G GL L VFD L N
Sbjct: 62 TWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKS 121
Query: 115 EIPAAISSLVSLRVLKLDGNMFQWSIPPGLLN-CQSLVTVDLSMNQLNGSLPDGFGAAFP 173
L L+ L+L+ N Q SIP G + +L T+ LS NQL S+P G
Sbjct: 122 LPSGVFDRLTKLKELRLNTNQLQ-SIPAGAFDKLTNLQTLSLSTNQLQ-SVPHGAFDRLG 179
Query: 174 KLKSLNLAGNEI 185
KL+++ L GN+
Sbjct: 180 KLQTITLFGNQF 191
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 658 IIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARG-SPGYIPPEFAQPDS---- 712
+HRD+ A +V L ++SDFGL+K DE + + G P ++ P+
Sbjct: 491 FVHRDLAARNVLLVTQHYAKISDFGLSKAL--RADENYYKAQTHGKWPVKWYAPECINYY 548
Query: 713 DFPTPKSDVYCYGVVLLELIT-GKKP 737
F + KSDV+ +GV++ E + G+KP
Sbjct: 549 KF-SSKSDVWSFGVLMWEAFSYGQKP 573
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIP 704
R L ++H S IIHRD+K S++ ++ + E ++ D GLA+ + + +A + Y
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVA--TRWYRA 190
Query: 705 PEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE + D++ G ++ EL+TG+
Sbjct: 191 PEIMLNWMHY-NQTVDIWSVGCIMAELLTGR 220
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 103/255 (40%), Gaps = 52/255 (20%)
Query: 510 FDRGTLLAEGKFGPVYRGFLPG-GIHVAVKVLVHGST------LTDQEAARELEYLGRIK 562
+D G L G+F V + G+ A K + T ++ ++ RE+ L I+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 563 HPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQ 622
HPN++ L I I + + G L + L + + +
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAE-------------------KESLTE 113
Query: 623 NVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYL-DMNL-EPRLS- 679
+E F +I G + +LH S I H D+K ++ L D N+ +PR+
Sbjct: 114 EEATE-------FLKQILNG----VYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 680 -DFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTP---KSDVYCYGVVLLELITGK 735
DFGLA G + + G+P ++ PE + P ++D++ GV+ L++G
Sbjct: 160 IDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE-----PLGLEADMWSIGVITYILLSGA 214
Query: 736 KPLGDDYPEEKEGNL 750
P D +E N+
Sbjct: 215 SPFLGDTKQETLANV 229
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 37.7 bits (86), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 658 IIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARG-SPGYIPPEFAQPDS---- 712
+HRD+ A +V L ++SDFGL+K DE + + G P ++ P+
Sbjct: 148 FVHRDLAARNVLLVTQHYAKISDFGLSKAL--RADENYYKAQTHGKWPVKWYAPECINYY 205
Query: 713 DFPTPKSDVYCYGVVLLELIT-GKKP 737
F + KSDV+ +GV++ E + G+KP
Sbjct: 206 KF-SSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 37.7 bits (86), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 658 IIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARG-SPGYIPPEFAQPDS---- 712
+HRD+ A +V L ++SDFGL+K DE + + G P ++ P+
Sbjct: 148 FVHRDLAARNVLLVTQHYAKISDFGLSKAL--RADENYYKAQTHGKWPVKWYAPECINYY 205
Query: 713 DFPTPKSDVYCYGVVLLELIT-GKKP 737
F + KSDV+ +GV++ E + G+KP
Sbjct: 206 KF-SSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 37.7 bits (86), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 103/255 (40%), Gaps = 52/255 (20%)
Query: 510 FDRGTLLAEGKFGPVYRGFLPG-GIHVAVKVLVHGST------LTDQEAARELEYLGRIK 562
+D G L G+F V + G+ A K + T ++ ++ RE+ L I+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 563 HPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQ 622
HPN++ L I I + + G L + L + + +
Sbjct: 73 HPNVITLHEVYENKTDVILIGELVAGGELFDFLAE-------------------KESLTE 113
Query: 623 NVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYL-DMNL-EPRLS- 679
+E F +I G + +LH S I H D+K ++ L D N+ +PR+
Sbjct: 114 EEATE-------FLKQILNG----VYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 680 -DFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTP---KSDVYCYGVVLLELITGK 735
DFGLA G + + G+P ++ PE + P ++D++ GV+ L++G
Sbjct: 160 IDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE-----PLGLEADMWSIGVITYILLSGA 214
Query: 736 KPLGDDYPEEKEGNL 750
P D +E N+
Sbjct: 215 SPFLGDTKQETLANV 229
>pdb|3M19|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
pdb|3M19|B Chain B, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
Length = 251
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 76/192 (39%), Gaps = 35/192 (18%)
Query: 20 GVVCDSNKQHVTDFLASNSGLSGSVPDTTIGKLSKLQSLDLSENNITALP-SDLWSLGSL 78
G C+ K+ V S + +P T + LDL + L + L L
Sbjct: 9 GCTCNEGKKEVDCQGKSLDSVPSGIPADT-------EKLDLQSTGLATLSDATFRGLTKL 61
Query: 79 KSLNLSYNRI----SGSLP--SNIGNFGL---------LEVFD---------LSNNNFSG 114
LNL YN++ +G + +G GL L VFD L N
Sbjct: 62 TWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKS 121
Query: 115 EIPAAISSLVSLRVLKLDGNMFQWSIPPGLLN-CQSLVTVDLSMNQLNGSLPDGFGAAFP 173
L L+ L+L+ N Q SIP G + +L T+ LS NQL S+P G
Sbjct: 122 LPSGVFDRLTKLKELRLNTNQLQ-SIPAGAFDKLTNLQTLSLSTNQLQ-SVPHGAFDRLG 179
Query: 174 KLKSLNLAGNEI 185
KL+++ L GN+
Sbjct: 180 KLQTITLFGNQF 191
>pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 570
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 79/187 (42%), Gaps = 33/187 (17%)
Query: 149 SLVTVDLSMNQLN---GSLPDGFGAAFPKLKSLNLAGNEIKGRDTHFAGLKSITNLNIS- 204
SL +DLS N L+ FG LK L+L+ N + ++F GL+ + +L+
Sbjct: 348 SLEFLDLSRNGLSFKGCCSQSDFGTT--SLKYLDLSFNGVITMSSNFLGLEQLEHLDFQH 405
Query: 205 GNLFQGSVMGVFLESLEVIDLRSNQFQGHISQVQFNSSYNWSRLVYVDLSENQLSGEIFH 264
NL Q S VFL LR+ L+Y+D+S
Sbjct: 406 SNLKQMSEFSVFLS------LRN--------------------LIYLDISHTHTRVAFNG 439
Query: 265 NFSQAQNLKHLSLAYNRFTRQEFPQIGT-LLGLEHLNLSRTSLIGDIPSEILQLSSLHTL 323
F+ +L+ L +A N F P I T L L L+LS+ L P+ LSSL L
Sbjct: 440 IFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVL 499
Query: 324 DLSMNHL 330
+++ N L
Sbjct: 500 NMASNQL 506
Score = 36.2 bits (82), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 64/139 (46%), Gaps = 9/139 (6%)
Query: 77 SLKSLNLSYNRISGSLPSNIGNFGLLEVFDLSNNNFSGEIPAAISSLVSLRVLKLDGNMF 136
S K+L+LS+N + + +F L+V DLS A SL L L L GN
Sbjct: 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPI 88
Query: 137 Q---WSIPPGLLNCQSLVTVDLSMNQLNGSLPDGFGAAFPKLKSLNLAGNEIKGRD--TH 191
Q GL + Q LV V+ ++ L + P G LK LN+A N I+ +
Sbjct: 89 QSLALGAFSGLSSLQKLVAVETNLASLE-NFPIG---HLKTLKELNVAHNLIQSFKLPEY 144
Query: 192 FAGLKSITNLNISGNLFQG 210
F+ L ++ +L++S N Q
Sbjct: 145 FSNLTNLEHLDLSSNKIQS 163
Score = 30.4 bits (67), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 64/140 (45%), Gaps = 23/140 (16%)
Query: 153 VDLSMNQLNGSLPDGFGAAFPKLKSLNLAGNEIKG-RDTHFAGLKSITNLNISGNLFQGS 211
+DLS N L F +FP+L+ L+L+ EI+ D + L ++ L ++GN Q
Sbjct: 33 LDLSFNPLRHLGSYSF-FSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSL 91
Query: 212 VMGVF-----LESLEVIDLRSNQFQ----GHISQV-QFNSSYNWSRLVYVDLSENQLSGE 261
+G F L+ L ++ + GH+ + + N ++N + S +
Sbjct: 92 ALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQ-----------SFK 140
Query: 262 IFHNFSQAQNLKHLSLAYNR 281
+ FS NL+HL L+ N+
Sbjct: 141 LPEYFSNLTNLEHLDLSSNK 160
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 12/97 (12%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLD------EEIARG 698
R L ++H S ++HRD+K S++ L+ + ++ DFGLA++ D E +A
Sbjct: 139 RGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVA-- 193
Query: 699 SPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
+ Y PE + T D++ G +L E+++ +
Sbjct: 194 TRWYRAPEIMLNSKGY-TKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 12/97 (12%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLD------EEIARG 698
R L ++H S ++HRD+K S++ L+ + ++ DFGLA++ D E +A
Sbjct: 140 RGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVA-- 194
Query: 699 SPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
+ Y PE + T D++ G +L E+++ +
Sbjct: 195 TRWYRAPEIMLNSKGY-TKSIDIWSVGCILAEMLSNR 230
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 37.4 bits (85), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIP 704
R L ++H S IIHRD+K S++ ++ + E ++ D GLA+ + + +A + Y
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVA--TRWYRA 190
Query: 705 PEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE + D++ G ++ EL+TG+
Sbjct: 191 PEIMLNWMHY-NQTVDIWSVGCIMAELLTGR 220
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 130/302 (43%), Gaps = 26/302 (8%)
Query: 75 LGSLKSLNLSYNRISGSLPSNIGNFGLLEVFDLSNNNFSGEIPAAISSLVSLRVLKLDGN 134
L +L +N S N+++ P + N L ++NN + P A +L +L L L N
Sbjct: 62 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITPLA--NLTNLTGLTLFNN 117
Query: 135 MFQWSIPPGLLNCQSLVTVDLSMNQLNGSLPDGFGAAFPKLKSLNLAGNEIKGRDTHFAG 194
I P L N +L ++LS N ++ + L+ LN + N++ A
Sbjct: 118 QIT-DIDP-LKNLTNLNRLELSSNTISDI---SALSGLTSLQQLNFSSNQVTDLK-PLAN 171
Query: 195 LKSITNLNISGNLFQGSVMGVFLESLEVIDLRSNQFQGHISQVQFNSSYNWSRLVYVDLS 254
L ++ L+IS N + L +LE + +NQ I+ + + L + L+
Sbjct: 172 LTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI-SDITPLGI-----LTNLDELSLN 225
Query: 255 ENQLSGEIFHNFSQAQNLKHLSLAYNRFTRQEFPQIGTLLGLEHLNLSRTSLIGDIPSEI 314
NQL + NL L LA N+ + + L L L L I +I S +
Sbjct: 226 GNQLKD--IGTLASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQ-ISNI-SPL 279
Query: 315 LQLSSLHTLDLSMNHLTGQIPTVSAKNLGIIDMSHNNLSGEIPASLLEKLPQMERFNFSY 374
L++L L+L+ N L P + KNL + + NN+S P S L KL ++ F Y
Sbjct: 280 AGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRL----FFY 335
Query: 375 NN 376
NN
Sbjct: 336 NN 337
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIP 704
+ L ++H + IIHRD+K ++ ++ + E ++ DFGLA+ + + + + Y
Sbjct: 139 KGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVV--TRWYRA 193
Query: 705 PEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
PE + T D++ G ++ E+ITGK
Sbjct: 194 PEVILNWMRY-TQTVDIWSVGCIMAEMITGK 223
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 37.4 bits (85), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 8/86 (9%)
Query: 658 IIHRDIKASSVYL--DMNLEP-RLSDFGLAKIFG-NGLDEEIARGSPGYIPPEFAQPDSD 713
IIHRD+K +V L N P +L DFG+A G +GL G+P ++ PE + +
Sbjct: 151 IIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPEVVKRE-- 208
Query: 714 FPTPKS-DVYCYGVVLLELITGKKPL 738
P K DV+ GV+L L++G P
Sbjct: 209 -PYGKPVDVWGCGVILFILLSGCLPF 233
>pdb|3RFJ|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 279
Score = 37.4 bits (85), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 4/106 (3%)
Query: 43 SVPDTTIGKLSKLQSLDLSENNITALPSDLWS-LGSLKSLNLSYNRISGSLPSNI-GNFG 100
S+P+ KL+ L+ L L EN + +LP ++ L +L L L +N++ SLP +
Sbjct: 99 SLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLYLYHNQLQ-SLPKGVFDKLT 157
Query: 101 LLEVFDLSNNNFSGEIPAAISSLVSLRVLKLDGNMFQWSIPPGLLN 146
L DL NN L L+ L L+ N + S+P G+ +
Sbjct: 158 NLTRLDLDNNQLQSLPEGVFDKLTQLKQLSLNDNQLK-SVPDGVFD 202
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 12/97 (12%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLD------EEIARG 698
R L ++H S ++HRD+K S++ L+ + ++ DFGLA++ D E +A
Sbjct: 135 RGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA-- 189
Query: 699 SPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
+ Y PE + T D++ G +L E+++ +
Sbjct: 190 TRWYRAPEIMLNSKGY-TKSIDIWSVGCILAEMLSNR 225
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 102/255 (40%), Gaps = 52/255 (20%)
Query: 510 FDRGTLLAEGKFGPVYRGFLPG-GIHVAVKVLVHGST------LTDQEAARELEYLGRIK 562
+D G L G F V + G+ A K + T ++ ++ RE+ L I+
Sbjct: 13 YDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 563 HPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQ 622
HPN++ L I I + + G L + L + + +
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAE-------------------KESLTE 113
Query: 623 NVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYL-DMNL-EPRLS- 679
+E F +I G + +LH S I H D+K ++ L D N+ +PR+
Sbjct: 114 EEATE-------FLKQILNG----VYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 680 -DFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTP---KSDVYCYGVVLLELITGK 735
DFGLA G + + G+P ++ PE + P ++D++ GV+ L++G
Sbjct: 160 IDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE-----PLGLEADMWSIGVITYILLSGA 214
Query: 736 KPLGDDYPEEKEGNL 750
P D +E N+
Sbjct: 215 SPFLGDTKQETLANV 229
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 12/97 (12%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLD------EEIARG 698
R L ++H S ++HRD+K S++ L+ + ++ DFGLA++ D E +A
Sbjct: 137 RGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA-- 191
Query: 699 SPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
+ Y PE + T D++ G +L E+++ +
Sbjct: 192 TRWYRAPEIMLNSKGY-TKSIDIWSVGCILAEMLSNR 227
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 12/97 (12%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLD------EEIARG 698
R L ++H S ++HRD+K S++ L+ + ++ DFGLA++ D E +A
Sbjct: 137 RGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA-- 191
Query: 699 SPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
+ Y PE + T D++ G +L E+++ +
Sbjct: 192 TRWYRAPEIMLNSKGY-TKSIDIWSVGCILAEMLSNR 227
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 12/97 (12%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLD------EEIARG 698
R L ++H S ++HRD+K S++ L+ + ++ DFGLA++ D E +A
Sbjct: 139 RGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA-- 193
Query: 699 SPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
+ Y PE + T D++ G +L E+++ +
Sbjct: 194 TRWYRAPEIMLNSKGY-TKSIDIWSVGCILAEMLSNR 229
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 12/97 (12%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLD------EEIARG 698
R L ++H S ++HRD+K S++ L+ + ++ DFGLA++ D E +A
Sbjct: 133 RGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA-- 187
Query: 699 SPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
+ Y PE + T D++ G +L E+++ +
Sbjct: 188 TRWYRAPEIMLNSKGY-TKSIDIWSVGCILAEMLSNR 223
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 12/97 (12%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLD------EEIARG 698
R L ++H S ++HRD+K S++ L+ + ++ DFGLA++ D E +A
Sbjct: 133 RGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA-- 187
Query: 699 SPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
+ Y PE + T D++ G +L E+++ +
Sbjct: 188 TRWYRAPEIMLNSKGY-TKSIDIWSVGCILAEMLSNR 223
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 12/97 (12%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLD------EEIARG 698
R L ++H S ++HRD+K S++ L+ + ++ DFGLA++ D E +A
Sbjct: 155 RGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA-- 209
Query: 699 SPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
+ Y PE + T D++ G +L E+++ +
Sbjct: 210 TRWYRAPEIMLNSKGY-TKSIDIWSVGCILAEMLSNR 245
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 12/97 (12%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLD------EEIARG 698
R L ++H S ++HRD+K S++ L+ + ++ DFGLA++ D E +A
Sbjct: 143 RGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA-- 197
Query: 699 SPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
+ Y PE + T D++ G +L E+++ +
Sbjct: 198 TRWYRAPEIMLNSKGY-TKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 12/97 (12%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLD------EEIARG 698
R L ++H S ++HRD+K S++ L+ + ++ DFGLA++ D E +A
Sbjct: 135 RGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA-- 189
Query: 699 SPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
+ Y PE + T D++ G +L E+++ +
Sbjct: 190 TRWYRAPEIMLNSKGY-TKSIDIWSVGCILAEMLSNR 225
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 10/113 (8%)
Query: 647 LAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPE 706
+LH S +I+RD+K ++ +D +++DFG AK G + G+P Y+ PE
Sbjct: 155 FEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-KGRTWXLC-GTPEYLAPE 209
Query: 707 FAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVR 759
S D + GV++ E+ G P D P + +VS G VR
Sbjct: 210 IIL--SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS---GKVR 257
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 12/97 (12%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLD------EEIARG 698
R L ++H S ++HRD+K S++ L+ + ++ DFGLA++ D E +A
Sbjct: 140 RGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA-- 194
Query: 699 SPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
+ Y PE + T D++ G +L E+++ +
Sbjct: 195 TRWYRAPEIMLNSKGY-TKSIDIWSVGCILAEMLSNR 230
>pdb|3ZYO|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
And Immunoglobulin Domain Of Netrin-G Ligand-3
Length = 411
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 76/192 (39%), Gaps = 28/192 (14%)
Query: 43 SVPDTTIGKLSKLQSLDLSENNITALPSDLWSLGSLKSLNLSYNRISGSLPSNIGNFGLL 102
+VP LSKL+ L L N I ++PS ++NR+ ++G L
Sbjct: 97 TVPTQAFEYLSKLRELWLRNNPIESIPS------------YAFNRVPSLRRLDLGELKRL 144
Query: 103 EVFDLSNNNFSGEIPAAISSLVSLRVLKLDGNMFQWSIPPGLLNCQSLVTVDLSMNQLNG 162
E AA LV+LR L L M P L L ++LS N+L+
Sbjct: 145 EYIS----------EAAFEGLVNLRYLNL--GMCNLKDIPNLTALVRLEELELSGNRLDL 192
Query: 163 SLPDGFGAAFPKLKSLNLAGNEIKGRDTH-FAGLKSITNLNISGNLFQGSVMGVF--LES 219
P F L+ L L ++ + + F LKS+ LN+S N +F L
Sbjct: 193 IRPGSF-QGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHR 251
Query: 220 LEVIDLRSNQFQ 231
LE + L N +
Sbjct: 252 LERVHLNHNPWH 263
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 12/97 (12%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLD------EEIARG 698
R L ++H S ++HRD+K S++ L+ + ++ DFGLA++ D E +A
Sbjct: 141 RGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA-- 195
Query: 699 SPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
+ Y PE + T D++ G +L E+++ +
Sbjct: 196 TRWYRAPEIMLNSKGY-TKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 12/97 (12%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLD------EEIARG 698
R L ++H S ++HRD+K S++ L+ + ++ DFGLA++ D E +A
Sbjct: 132 RGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA-- 186
Query: 699 SPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
+ Y PE + T D++ G +L E+++ +
Sbjct: 187 TRWYRAPEIMLNSKGY-TKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 12/97 (12%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLD------EEIARG 698
R L ++H S ++HRD+K S++ L+ + ++ DFGLA++ D E +A
Sbjct: 139 RGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA-- 193
Query: 699 SPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
+ Y PE + T D++ G +L E+++ +
Sbjct: 194 TRWYRAPEIMLNSKGY-TKSIDIWSVGCILAEMLSNR 229
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 12/97 (12%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLD------EEIARG 698
R L ++H S ++HRD+K S++ L+ + ++ DFGLA++ D E +A
Sbjct: 139 RGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA-- 193
Query: 699 SPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
+ Y PE + T D++ G +L E+++ +
Sbjct: 194 TRWYRAPEIMLNSKGY-TKSIDIWSVGCILAEMLSNR 229
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 37.0 bits (84), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 10/113 (8%)
Query: 647 LAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPE 706
+LH S +I+RD+K ++ +D +++DFG AK G + G+P Y+ PE
Sbjct: 155 FEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-KGRTWXLC-GTPEYLAPE 209
Query: 707 FAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVR 759
S D + GV++ E+ G P D P + +VS G VR
Sbjct: 210 IIL--SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS---GKVR 257
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 37.0 bits (84), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 10/113 (8%)
Query: 647 LAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPE 706
+LH S +I+RD+K ++ +D +++DFG AK G + G+P Y+ PE
Sbjct: 155 FEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-KGRTWXLC-GTPEYLAPE 209
Query: 707 FAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVR 759
S D + GV++ E+ G P D P + +VS G VR
Sbjct: 210 IIL--SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS---GKVR 257
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 37.0 bits (84), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 10/113 (8%)
Query: 647 LAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPE 706
+LH S +I+RD+K ++ +D +++DFG AK G + G+P Y+ PE
Sbjct: 154 FEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-KGRTWXLC-GTPEYLAPE 208
Query: 707 FAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVR 759
S D + GV++ E+ G P D P + +VS G VR
Sbjct: 209 IIL--SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS---GKVR 256
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 37.0 bits (84), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 9/97 (9%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFG---NGLDEEIARGSPG 701
+ L F H S ++HRD+K ++ ++ N E +L++FGLA+ FG E+ +
Sbjct: 112 KGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV--TLW 166
Query: 702 YIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
Y PP+ + T D++ G + EL +PL
Sbjct: 167 YRPPDVLFGAKLYST-SIDMWSAGCIFAELANAGRPL 202
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 37.0 bits (84), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 10/113 (8%)
Query: 647 LAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPE 706
+LH S +I+RD+K ++ +D +++DFG AK G + G+P Y+ PE
Sbjct: 154 FEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-KGRTWXLC-GTPEYLAPE 208
Query: 707 FAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVR 759
S D + GV++ E+ G P D P + +VS G VR
Sbjct: 209 IIL--SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS---GKVR 256
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 37.0 bits (84), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 10/113 (8%)
Query: 647 LAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPE 706
+LH S +I+RD+K ++ +D +++DFG AK G + G+P Y+ PE
Sbjct: 155 FEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-KGRTWXLC-GTPEYLAPE 209
Query: 707 FAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVR 759
S D + GV++ E+ G P D P + +VS G VR
Sbjct: 210 IIL--SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS---GKVR 257
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 37.0 bits (84), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDM-NLEPRLSDFGLAKIFGNGLDEEIARGSPGYI 703
+AL + H S I+HRD+K +V +D + + RL D+GLA+ + G + + S +
Sbjct: 142 KALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFK 198
Query: 704 PPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
PE D D++ G +L +I K+P
Sbjct: 199 GPELL-VDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 37.0 bits (84), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 12/97 (12%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKI------FGNGLDEEIARG 698
R L ++H S ++HRD+K S++ ++ + ++ DFGLA+I L E +A
Sbjct: 155 RGLKYIH---SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVA-- 209
Query: 699 SPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
+ Y PE + T D++ G +L E+++ +
Sbjct: 210 TRWYRAPEIMLNSKGY-TKSIDIWSVGCILAEMLSNR 245
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 37.0 bits (84), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDM-NLEPRLSDFGLAKIFGNGLDEEIARGSPGYI 703
+AL + H S I+HRD+K +V +D + + RL D+GLA+ + G + + S +
Sbjct: 142 KALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFK 198
Query: 704 PPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
PE D D++ G +L +I K+P
Sbjct: 199 GPELL-VDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|2Z62|A Chain A, Crystal Structure Of The Tv3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z65|A Chain A, Crystal Structure Of The Human Tlr4 Tv3
Hybrid-Md-2-Eritoran Complex
pdb|2Z65|B Chain B, Crystal Structure Of The Human Tlr4 Tv3
Hybrid-Md-2-Eritoran Complex
Length = 276
Score = 37.0 bits (84), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 64/139 (46%), Gaps = 9/139 (6%)
Query: 77 SLKSLNLSYNRISGSLPSNIGNFGLLEVFDLSNNNFSGEIPAAISSLVSLRVLKLDGNMF 136
S K+L+LS+N + + +F L+V DLS A SL L L L GN
Sbjct: 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPI 88
Query: 137 Q---WSIPPGLLNCQSLVTVDLSMNQLNGSLPDGFGAAFPKLKSLNLAGNEIKGRD--TH 191
Q GL + Q LV V+ ++ L + P G LK LN+A N I+ +
Sbjct: 89 QSLALGAFSGLSSLQKLVAVETNLASLE-NFPIG---HLKTLKELNVAHNLIQSFKLPEY 144
Query: 192 FAGLKSITNLNISGNLFQG 210
F+ L ++ +L++S N Q
Sbjct: 145 FSNLTNLEHLDLSSNKIQS 163
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 64/140 (45%), Gaps = 23/140 (16%)
Query: 153 VDLSMNQLNGSLPDGFGAAFPKLKSLNLAGNEIKG-RDTHFAGLKSITNLNISGNLFQGS 211
+DLS N L F +FP+L+ L+L+ EI+ D + L ++ L ++GN Q
Sbjct: 33 LDLSFNPLRHLGSYSF-FSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSL 91
Query: 212 VMGVF-----LESLEVIDLRSNQFQ----GHISQV-QFNSSYNWSRLVYVDLSENQLSGE 261
+G F L+ L ++ + GH+ + + N ++N + S +
Sbjct: 92 ALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQ-----------SFK 140
Query: 262 IFHNFSQAQNLKHLSLAYNR 281
+ FS NL+HL L+ N+
Sbjct: 141 LPEYFSNLTNLEHLDLSSNK 160
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 37.0 bits (84), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDM-NLEPRLSDFGLAKIFGNGLDEEIARGSPGYI 703
+AL + H S I+HRD+K +V +D + + RL D+GLA+ + G + + S +
Sbjct: 142 KALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFK 198
Query: 704 PPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
PE D D++ G +L +I K+P
Sbjct: 199 GPELL-VDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 37.0 bits (84), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 12/97 (12%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLD------EEIARG 698
R L ++H S ++HRD+K S++ L+ + ++ DFGLA++ D E +A
Sbjct: 155 RGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA-- 209
Query: 699 SPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
+ Y PE + T D++ G +L E+++ +
Sbjct: 210 TRWYRAPEIMLNSKGY-TKSIDIWSVGCILAEMLSNR 245
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 37.0 bits (84), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 12/97 (12%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLD------EEIARG 698
R L ++H S ++HRD+K S++ L+ + ++ DFGLA++ D E +A
Sbjct: 139 RGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA-- 193
Query: 699 SPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
+ Y PE + T D++ G +L E+++ +
Sbjct: 194 TRWYRAPEIMLNSKGY-TKSIDIWSVGCILAEMLSNR 229
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 37.0 bits (84), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 12/97 (12%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLD------EEIARG 698
R L ++H S ++HRD+K S++ L+ + ++ DFGLA++ D E +A
Sbjct: 139 RGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA-- 193
Query: 699 SPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
+ Y PE + T D++ G +L E+++ +
Sbjct: 194 TRWYRAPEIMLNSKGY-TKSIDIWSVGCILAEMLSNR 229
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 37.0 bits (84), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 12/97 (12%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLD------EEIARG 698
R L ++H S ++HRD+K S++ L+ + ++ DFGLA++ D E +A
Sbjct: 135 RGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA-- 189
Query: 699 SPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
+ Y PE + T D++ G +L E+++ +
Sbjct: 190 TRWYRAPEIMLNSKGY-TKSIDIWSVGCILAEMLSNR 225
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 37.0 bits (84), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDM-NLEPRLSDFGLAKIFGNGLDEEIARGSPGYI 703
+AL + H S I+HRD+K +V +D + + RL D+GLA+ + G + + S +
Sbjct: 142 KALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFK 198
Query: 704 PPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
PE D D++ G +L +I K+P
Sbjct: 199 GPELL-VDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 37.0 bits (84), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDM-NLEPRLSDFGLAKIFGNGLDEEIARGSPGYI 703
+AL + H S I+HRD+K +V +D + + RL D+GLA+ + G + + S +
Sbjct: 141 KALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFK 197
Query: 704 PPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
PE D D++ G +L +I K+P
Sbjct: 198 GPELL-VDYQMYDYSLDMWSLGCMLASMIFRKEPF 231
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 36.6 bits (83), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 10/113 (8%)
Query: 647 LAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPE 706
+LH S +I+RD+K ++ +D +++DFG AK G + G+P Y+ PE
Sbjct: 155 FEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV-KGRTWXLC-GTPEYLAPE 209
Query: 707 FAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVR 759
S D + GV++ E+ G P D P + +VS G VR
Sbjct: 210 IIL--SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS---GKVR 257
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 36.6 bits (83), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDM-NLEPRLSDFGLAKIFGNGLDEEIARGSPGYI 703
+AL + H S I+HRD+K +V +D + + RL D+GLA+ + G + + S +
Sbjct: 142 KALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFK 198
Query: 704 PPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
PE D D++ G +L +I K+P
Sbjct: 199 GPELL-VDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDM-NLEPRLSDFGLAKIFGNGLDEEIARGSPGYI 703
+AL + H S I+HRD+K +V +D + + RL D+GLA+ + G + + S +
Sbjct: 142 KALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFK 198
Query: 704 PPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
PE D D++ G +L +I K+P
Sbjct: 199 GPELL-VDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 12/97 (12%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLD------EEIARG 698
R L ++H S ++HRD+K S++ L+ + ++ DFGLA++ D E +A
Sbjct: 135 RGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA-- 189
Query: 699 SPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
+ Y PE + T D++ G +L E+++ +
Sbjct: 190 TRWYRAPEIMLNSKGY-TKSIDIWSVGCILAEMLSNR 225
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 10/113 (8%)
Query: 647 LAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPE 706
+LH S +I+RD+K ++ +D +++DFG AK G + G+P Y+ PE
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV-KGRTWXLC-GTPEYLAPE 208
Query: 707 FAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVR 759
S D + GV++ E+ G P D P + +VS G VR
Sbjct: 209 IIL--SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS---GKVR 256
>pdb|3UL9|A Chain A, Structure Of The Tv3 Mutant M41e
Length = 278
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 64/139 (46%), Gaps = 9/139 (6%)
Query: 77 SLKSLNLSYNRISGSLPSNIGNFGLLEVFDLSNNNFSGEIPAAISSLVSLRVLKLDGNMF 136
S K+L+LS+N + + +F L+V DLS A SL L L L GN
Sbjct: 30 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPI 89
Query: 137 Q---WSIPPGLLNCQSLVTVDLSMNQLNGSLPDGFGAAFPKLKSLNLAGNEIKGRD--TH 191
Q GL + Q LV V+ ++ L + P G LK LN+A N I+ +
Sbjct: 90 QSLALGAFSGLSSLQKLVAVETNLASLE-NFPIG---HLKTLKELNVAHNLIQSFKLPEY 145
Query: 192 FAGLKSITNLNISGNLFQG 210
F+ L ++ +L++S N Q
Sbjct: 146 FSNLTNLEHLDLSSNKIQS 164
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 64/140 (45%), Gaps = 23/140 (16%)
Query: 153 VDLSMNQLNGSLPDGFGAAFPKLKSLNLAGNEIKG-RDTHFAGLKSITNLNISGNLFQGS 211
+DLS N L F +FP+L+ L+L+ EI+ D + L ++ L ++GN Q
Sbjct: 34 LDLSFNPLRHLGSYSF-FSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSL 92
Query: 212 VMGVF-----LESLEVIDLRSNQFQ----GHISQV-QFNSSYNWSRLVYVDLSENQLSGE 261
+G F L+ L ++ + GH+ + + N ++N + S +
Sbjct: 93 ALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQ-----------SFK 141
Query: 262 IFHNFSQAQNLKHLSLAYNR 281
+ FS NL+HL L+ N+
Sbjct: 142 LPEYFSNLTNLEHLDLSSNK 161
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 10/113 (8%)
Query: 647 LAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPE 706
+LH S +I+RD+K ++ +D +++DFG AK G + G+P Y+ PE
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV-KGRTWXLC-GTPEYLAPE 208
Query: 707 FAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVR 759
S D + GV++ E+ G P D P + +VS G VR
Sbjct: 209 IIL--SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS---GKVR 256
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDM-NLEPRLSDFGLAKIFGNGLDEEIARGSPGYI 703
+AL + H S I+HRD+K +V +D + + RL D+GLA+ + G + + S +
Sbjct: 141 KALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFK 197
Query: 704 PPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
PE D D++ G +L +I K+P
Sbjct: 198 GPELL-VDYQMYDYSLDMWSLGCMLASMIFRKEPF 231
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDM-NLEPRLSDFGLAKIFGNGLDEEIARGSPGYI 703
+AL + H S I+HRD+K +V +D + + RL D+GLA+ + G + + S +
Sbjct: 142 KALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFK 198
Query: 704 PPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
PE D D++ G +L +I K+P
Sbjct: 199 GPELL-VDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 36.6 bits (83), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDM-NLEPRLSDFGLAKIFGNGLDEEIARGSPGYI 703
+AL + H S I+HRD+K +V +D + + RL D+GLA+ + G + + S +
Sbjct: 142 KALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFK 198
Query: 704 PPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
PE D D++ G +L +I K+P
Sbjct: 199 GPELL-VDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 36.6 bits (83), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDM-NLEPRLSDFGLAKIFGNGLDEEIARGSPGYI 703
+AL + H S I+HRD+K +V +D + + RL D+GLA+ + G + + S +
Sbjct: 142 KALDYCH---SMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFK 198
Query: 704 PPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
PE D D++ G +L +I K+P
Sbjct: 199 GPELL-VDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 36.6 bits (83), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 10/113 (8%)
Query: 647 LAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPE 706
+LH S +I+RD+K ++ +D +++DFG AK G + G+P Y+ PE
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV-KGRTWXLC-GTPEYLAPE 208
Query: 707 FAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVR 759
S D + GV++ E+ G P D P + +VS G VR
Sbjct: 209 IIL--SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS---GKVR 256
>pdb|3ULA|A Chain A, Crystal Structure Of The Tv3 Mutant F63w-Md-2-Eritoran
Complex
pdb|3ULA|C Chain C, Crystal Structure Of The Tv3 Mutant F63w-Md-2-Eritoran
Complex
Length = 279
Score = 36.6 bits (83), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 64/139 (46%), Gaps = 9/139 (6%)
Query: 77 SLKSLNLSYNRISGSLPSNIGNFGLLEVFDLSNNNFSGEIPAAISSLVSLRVLKLDGNMF 136
S K+L+LS+N + + +F L+V DLS A SL L L L GN
Sbjct: 31 STKNLDLSWNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPI 90
Query: 137 Q---WSIPPGLLNCQSLVTVDLSMNQLNGSLPDGFGAAFPKLKSLNLAGNEIKGRD--TH 191
Q GL + Q LV V+ ++ L + P G LK LN+A N I+ +
Sbjct: 91 QSLALGAFSGLSSLQKLVAVETNLASLE-NFPIGH---LKTLKELNVAHNLIQSFKLPEY 146
Query: 192 FAGLKSITNLNISGNLFQG 210
F+ L ++ +L++S N Q
Sbjct: 147 FSNLTNLEHLDLSSNKIQS 165
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 64/141 (45%), Gaps = 23/141 (16%)
Query: 153 VDLSMNQLNGSLPDGFGAAFPKLKSLNLAGNEIKG-RDTHFAGLKSITNLNISGNLFQGS 211
+DLS N L F +FP+L+ L+L+ EI+ D + L ++ L ++GN Q
Sbjct: 35 LDLSWNPLRHLGSYSF-FSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSL 93
Query: 212 VMGVF-----LESLEVIDLRSNQFQ----GHISQV-QFNSSYNWSRLVYVDLSENQLSGE 261
+G F L+ L ++ + GH+ + + N ++N + S +
Sbjct: 94 ALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQ-----------SFK 142
Query: 262 IFHNFSQAQNLKHLSLAYNRF 282
+ FS NL+HL L+ N+
Sbjct: 143 LPEYFSNLTNLEHLDLSSNKI 163
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 36.6 bits (83), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDM-NLEPRLSDFGLAKIFGNGLDEEIARGSPGYI 703
+AL + H S I+HRD+K +V +D + + RL D+GLA+ + G + + S +
Sbjct: 147 KALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFK 203
Query: 704 PPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
PE D D++ G +L +I K+P
Sbjct: 204 GPELL-VDYQMYDYSLDMWSLGCMLASMIFRKEPF 237
>pdb|3UL7|A Chain A, Crystal Structure Of The Tv3 Mutant F63w
Length = 278
Score = 36.6 bits (83), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 64/139 (46%), Gaps = 9/139 (6%)
Query: 77 SLKSLNLSYNRISGSLPSNIGNFGLLEVFDLSNNNFSGEIPAAISSLVSLRVLKLDGNMF 136
S K+L+LS+N + + +F L+V DLS A SL L L L GN
Sbjct: 30 STKNLDLSWNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPI 89
Query: 137 Q---WSIPPGLLNCQSLVTVDLSMNQLNGSLPDGFGAAFPKLKSLNLAGNEIKGRD--TH 191
Q GL + Q LV V+ ++ L + P G LK LN+A N I+ +
Sbjct: 90 QSLALGAFSGLSSLQKLVAVETNLASLE-NFPIGH---LKTLKELNVAHNLIQSFKLPEY 145
Query: 192 FAGLKSITNLNISGNLFQG 210
F+ L ++ +L++S N Q
Sbjct: 146 FSNLTNLEHLDLSSNKIQS 164
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 64/141 (45%), Gaps = 23/141 (16%)
Query: 153 VDLSMNQLNGSLPDGFGAAFPKLKSLNLAGNEIKG-RDTHFAGLKSITNLNISGNLFQGS 211
+DLS N L F +FP+L+ L+L+ EI+ D + L ++ L ++GN Q
Sbjct: 34 LDLSWNPLRHLGSYSF-FSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSL 92
Query: 212 VMGVF-----LESLEVIDLRSNQFQ----GHISQV-QFNSSYNWSRLVYVDLSENQLSGE 261
+G F L+ L ++ + GH+ + + N ++N + S +
Sbjct: 93 ALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQ-----------SFK 141
Query: 262 IFHNFSQAQNLKHLSLAYNRF 282
+ FS NL+HL L+ N+
Sbjct: 142 LPEYFSNLTNLEHLDLSSNKI 162
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 36.6 bits (83), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 10/113 (8%)
Query: 647 LAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPE 706
+LH S +I+RD+K ++ +D +++DFG AK G + G+P Y+ PE
Sbjct: 175 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGATWTLC-GTPEYLAPE 229
Query: 707 FAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVR 759
S D + GV++ E+ G P D P + +VS G VR
Sbjct: 230 IIL--SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS---GKVR 277
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 36.6 bits (83), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDM-NLEPRLSDFGLAKIFGNGLDEEIARGSPGYI 703
+AL + H S I+HRD+K +V +D + + RL D+GLA+ + G + + S +
Sbjct: 142 KALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFK 198
Query: 704 PPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
PE D D++ G +L +I K+P
Sbjct: 199 GPELL-VDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 36.6 bits (83), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 647 LAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAK-IFGNGLDEEIARGSPGYIPP 705
+LH S +I+RD+K ++ +D +++DFG AK + G G+P Y+ P
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW---XLXGTPEYLAP 207
Query: 706 EFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVR 759
E S D + GV++ E+ G P D P + +VS G VR
Sbjct: 208 EIIL--SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS---GKVR 256
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 36.6 bits (83), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 12/97 (12%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLD------EEIARG 698
R L ++H S ++HRD+K S++ L+ + ++ DFGLA++ D E +A
Sbjct: 135 RGLKYIH---SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVA-- 189
Query: 699 SPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
+ Y PE + T D++ G +L E+++ +
Sbjct: 190 TRWYRAPEIMLNSKGY-TKSIDIWSVGCILAEMLSNR 225
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 36.6 bits (83), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 10/113 (8%)
Query: 647 LAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPE 706
+LH S +I+RD+K ++ +D +++DFG AK G + G+P Y+ PE
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC-GTPEYLAPE 208
Query: 707 FAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVR 759
S D + GV++ E+ G P D P + +VS G VR
Sbjct: 209 IIL--SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS---GKVR 256
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 36.6 bits (83), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 10/113 (8%)
Query: 647 LAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPE 706
+LH S +I+RD+K ++ +D +++DFG AK G + G+P Y+ PE
Sbjct: 175 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC-GTPEYLAPE 229
Query: 707 FAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVR 759
S D + GV++ E+ G P D P + +VS G VR
Sbjct: 230 IIL--SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS---GKVR 277
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 36.6 bits (83), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDM-NLEPRLSDFGLAKIFGNGLDEEIARGSPGYI 703
+AL + H S I+HRD+K +V +D + + RL D+GLA+ + G + + S +
Sbjct: 142 KALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFK 198
Query: 704 PPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
PE D D++ G +L +I K+P
Sbjct: 199 GPELL-VDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 36.6 bits (83), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 98/255 (38%), Gaps = 44/255 (17%)
Query: 509 NFDRGTLLAEGKFGPVY-RGFLPGGIHVAVKVLVHGSTLTDQEAAR---ELEYLGRIKHP 564
F+R L G FG V + G H A+K+L + ++ E L + P
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 565 NLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNV 624
LV L + + +N NL ++ +P G + ++ +
Sbjct: 102 FLVKLE------------FSFKDNSNLYMVMEYVPGG--------------EMFSHLRRI 135
Query: 625 GSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLA 684
G + +I L +LH S +I+RD+K ++ +D +++DFG A
Sbjct: 136 GRFSEPHARFYAAQIVL----TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
Query: 685 KIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPE 744
K G + G+P Y+ PE S D + GV++ E+ G P D P
Sbjct: 189 KRV-KGRTWXLC-GTPEYLAPEIIL--SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI 244
Query: 745 EKEGNLVSWVRGLVR 759
+ +VS G VR
Sbjct: 245 QIYEKIVS---GKVR 256
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 36.6 bits (83), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDM-NLEPRLSDFGLAKIFGNGLDEEIARGSPGYI 703
+AL + H S I+HRD+K +V +D + + RL D+GLA+ + G + + S +
Sbjct: 140 KALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFK 196
Query: 704 PPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738
PE D D++ G +L +I K+P
Sbjct: 197 GPELL-VDYQMYDYSLDMWSLGCMLASMIFRKEPF 230
>pdb|1W8A|A Chain A, Third Lrr Domain Of Drosophila Slit
Length = 192
Score = 36.6 bits (83), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 5/111 (4%)
Query: 29 HVTDFLASNSGLSGSVPDTTIGKLSKLQSLDLSENNITAL-PSDLWSLGSLKSLNLSYNR 87
H T+ L +++ L D G+L L L+L N +T + P+ ++ L L N+
Sbjct: 30 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENK 89
Query: 88 ISGSLPSNIGNFGL--LEVFDLSNNNFSGEIPAAISSLVSLRVLKLDGNMF 136
I SN GL L+ +L +N S +P + L SL L L N F
Sbjct: 90 IKEI--SNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPF 138
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 29 HVTDFLASNSGLSGSVPDTTIGKLSKLQSLDLSENNITALPSDLW-SLGSLKSLNLSYNR 87
H+ + L+G P+ G S +Q L L EN I + + ++ L LK+LNL N+
Sbjct: 55 HLVKLELKRNQLTGIEPNAFEGA-SHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQ 113
Query: 88 ISGSLPSNIGNFGLLEVFDLSNNNFS 113
IS +P + + L +L++N F+
Sbjct: 114 ISCVMPGSFEHLNSLTSLNLASNPFN 139
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%)
Query: 248 LVYVDLSENQLSGEIFHNFSQAQNLKHLSLAYNRFTRQEFPQIGTLLGLEHLNLSRTSLI 307
LV ++L NQL+G + F A +++ L L N+ L L+ LNL +
Sbjct: 56 LVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQIS 115
Query: 308 GDIPSEILQLSSLHTLDLSMN 328
+P L+SL +L+L+ N
Sbjct: 116 CVMPGSFEHLNSLTSLNLASN 136
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 36.6 bits (83), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 10/113 (8%)
Query: 647 LAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPE 706
+LH S +I+RD+K ++ +D +++DFG AK G + G+P Y+ PE
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC-GTPEYLAPE 208
Query: 707 FAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVR 759
S D + GV++ E+ G P D P + +VS G VR
Sbjct: 209 IIL--SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS---GKVR 256
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 36.6 bits (83), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 10/113 (8%)
Query: 647 LAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPE 706
+LH S +I+RD+K ++ +D +++DFG AK G + G+P Y+ PE
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC-GTPEYLAPE 208
Query: 707 FAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVR 759
S D + GV++ E+ G P D P + +VS G VR
Sbjct: 209 IIL--SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS---GKVR 256
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 36.6 bits (83), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 10/113 (8%)
Query: 647 LAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPE 706
+LH S +I+RD+K ++ +D +++DFG AK G + G+P Y+ PE
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC-GTPEYLAPE 208
Query: 707 FAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVR 759
S D + GV++ E+ G P D P + +VS G VR
Sbjct: 209 IIL--SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS---GKVR 256
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 36.6 bits (83), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 10/113 (8%)
Query: 647 LAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPE 706
+LH S +I+RD+K ++ +D +++DFG AK G + G+P Y+ PE
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC-GTPEYLAPE 208
Query: 707 FAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVR 759
S D + GV++ E+ G P D P + +VS G VR
Sbjct: 209 IIL--SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS---GKVR 256
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 36.6 bits (83), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 10/113 (8%)
Query: 647 LAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPE 706
+LH S +I+RD+K ++ +D +++DFG AK G + G+P Y+ PE
Sbjct: 154 FEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRV-KGRTWXLC-GTPEYLAPE 208
Query: 707 FAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVR 759
S D + GV++ E+ G P D P + +VS G VR
Sbjct: 209 IIL--SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS---GKVR 256
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 36.6 bits (83), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 10/113 (8%)
Query: 647 LAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPE 706
+LH S +I+RD+K ++ +D +++DFG AK G + G+P Y+ PE
Sbjct: 155 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC-GTPEYLAPE 209
Query: 707 FAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVR 759
S D + GV++ E+ G P D P + +VS G VR
Sbjct: 210 IIL--SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS---GKVR 257
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 36.6 bits (83), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 10/113 (8%)
Query: 647 LAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPE 706
+LH S +I+RD+K ++ +D +++DFG AK G + G+P Y+ PE
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC-GTPEYLAPE 208
Query: 707 FAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVR 759
S D + GV++ E+ G P D P + +VS G VR
Sbjct: 209 IIL--SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS---GKVR 256
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 36.6 bits (83), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 10/113 (8%)
Query: 647 LAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPE 706
+LH S +I+RD+K ++ +D +++DFG AK G + G+P Y+ PE
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC-GTPEYLAPE 208
Query: 707 FAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVR 759
S D + GV++ E+ G P D P + +VS G VR
Sbjct: 209 IIL--SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS---GKVR 256
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 36.6 bits (83), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 98/255 (38%), Gaps = 44/255 (17%)
Query: 509 NFDRGTLLAEGKFGPVY-RGFLPGGIHVAVKVLVHGSTLTDQEAAR---ELEYLGRIKHP 564
F+R L G FG V + G H A+K+L + ++ E L + P
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 565 NLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNV 624
LV L + + +N NL ++ +P G + ++ +
Sbjct: 103 FLVKLE------------FSFKDNSNLYMVMEYVPGG--------------EMFSHLRRI 136
Query: 625 GSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLA 684
G + +I L +LH S +I+RD+K ++ +D +++DFG A
Sbjct: 137 GRFSEPHARFYAAQIVL----TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFA 189
Query: 685 KIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPE 744
K G + G+P Y+ PE S D + GV++ E+ G P D P
Sbjct: 190 KRV-KGRTWTLC-GTPEYLAPEIIL--SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI 245
Query: 745 EKEGNLVSWVRGLVR 759
+ +VS G VR
Sbjct: 246 QIYEKIVS---GKVR 257
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 36.6 bits (83), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 102/273 (37%), Gaps = 50/273 (18%)
Query: 491 FEKPLLNITFADLLSATSNFDRGTLLAEGKFGPVY-RGFLPGGIHVAVKVLVHGSTLTDQ 549
+E P N D F+R L G FG V G H A+K+L + +
Sbjct: 30 WENPAQNTAHLD------QFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLK 83
Query: 550 EAAR---ELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXX 606
+ E L + P LV L Y + +N NL ++ +P G
Sbjct: 84 QIEHTLNEKRILQAVNFPFLVKLE------------YSFKDNSNLYMVMEYVPGG----- 126
Query: 607 XXXXXXXXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKAS 666
+ ++ +G + +I L +LH S +I+RD+K
Sbjct: 127 ---------EMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH---SLDLIYRDLKPE 170
Query: 667 SVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGV 726
++ +D +++DFG AK G + G+P Y+ PE S D + GV
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRV-KGRTWXLC-GTPEYLAPEIIL--SKGYNKAVDWWALGV 226
Query: 727 VLLELITGKKPLGDDYPEEKEGNLVSWVRGLVR 759
++ E+ G P D P + +VS G VR
Sbjct: 227 LIYEMAAGYPPFFADQPIQIYEKIVS---GKVR 256
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 36.6 bits (83), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 98/255 (38%), Gaps = 44/255 (17%)
Query: 509 NFDRGTLLAEGKFGPVY-RGFLPGGIHVAVKVLVHGSTLTDQEAAR---ELEYLGRIKHP 564
F+R L G FG V + G H A+K+L + ++ E L + P
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 565 NLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNV 624
LV L + + +N NL ++ +P G + ++ +
Sbjct: 103 FLVKLE------------FSFKDNSNLYMVMEYVPGG--------------EMFSHLRRI 136
Query: 625 GSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLA 684
G + +I L +LH S +I+RD+K ++ +D +++DFG A
Sbjct: 137 GRFSEPHARFYAAQIVL----TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFA 189
Query: 685 KIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPE 744
K G + G+P Y+ PE S D + GV++ E+ G P D P
Sbjct: 190 KRV-KGRTWXLC-GTPEYLAPEIIL--SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI 245
Query: 745 EKEGNLVSWVRGLVR 759
+ +VS G VR
Sbjct: 246 QIYEKIVS---GKVR 257
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 36.6 bits (83), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 10/114 (8%)
Query: 646 ALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPP 705
+LH S +I+RD+K ++ +D +++DFG AK G + G+P Y+ P
Sbjct: 148 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC-GTPEYLAP 202
Query: 706 EFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVR 759
E S D + GV++ E+ G P D P + +VS G VR
Sbjct: 203 EIIL--SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS---GKVR 251
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 36.6 bits (83), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 98/256 (38%), Gaps = 44/256 (17%)
Query: 508 SNFDRGTLLAEGKFGPVY-RGFLPGGIHVAVKVLVHGSTLTDQEAAR---ELEYLGRIKH 563
F+R L G FG V + G H A+K+L + ++ E L +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 564 PNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQN 623
P LV L + + +N NL ++ +P G + ++
Sbjct: 101 PFLVKLE------------FSFKDNSNLYMVMEYVPGG--------------EMFSHLRR 134
Query: 624 VGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGL 683
+G + +I L +LH S +I+RD+K ++ +D +++DFG
Sbjct: 135 IGRFSEPHARFYAAQIVL----TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
Query: 684 AKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYP 743
AK G + G+P Y+ PE S D + GV++ E+ G P D P
Sbjct: 188 AKRV-KGRTWXLC-GTPEYLAPEIIL--SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
Query: 744 EEKEGNLVSWVRGLVR 759
+ +VS G VR
Sbjct: 244 IQIYEKIVS---GKVR 256
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 36.2 bits (82), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 98/256 (38%), Gaps = 44/256 (17%)
Query: 508 SNFDRGTLLAEGKFGPVY-RGFLPGGIHVAVKVLVHGSTLTDQEAAR---ELEYLGRIKH 563
F+R L G FG V + G H A+K+L + ++ E L +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 564 PNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQN 623
P LV L + + +N NL ++ +P G + ++
Sbjct: 101 PFLVKLE------------FSFKDNSNLYMVMEYVPGG--------------EMFSHLRR 134
Query: 624 VGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGL 683
+G + +I L +LH S +I+RD+K ++ +D +++DFG
Sbjct: 135 IGRFSEPHARFYAAQIVL----TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
Query: 684 AKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYP 743
AK G + G+P Y+ PE S D + GV++ E+ G P D P
Sbjct: 188 AKRV-KGRTWXLC-GTPEYLAPEIIL--SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
Query: 744 EEKEGNLVSWVRGLVR 759
+ +VS G VR
Sbjct: 244 IQIYEKIVS---GKVR 256
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 36.2 bits (82), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 10/113 (8%)
Query: 647 LAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPE 706
+LH S +I+RD+K ++ +D +++DFG AK G + G+P Y+ PE
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC-GTPEYLAPE 208
Query: 707 FAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVR 759
S D + GV++ E+ G P D P + +VS G VR
Sbjct: 209 IIL--SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS---GKVR 256
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 36.2 bits (82), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 10/113 (8%)
Query: 647 LAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPE 706
+LH S +I+RD+K ++ +D +++DFG AK G + G+P Y+ PE
Sbjct: 155 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC-GTPEYLAPE 209
Query: 707 FAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVR 759
S D + GV++ E+ G P D P + +VS G VR
Sbjct: 210 IIL--SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS---GKVR 257
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 36.2 bits (82), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 10/114 (8%)
Query: 646 ALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPP 705
+LH S +I+RD+K ++ +D +++DFG AK G + G+P Y+ P
Sbjct: 146 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC-GTPEYLAP 200
Query: 706 EFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVR 759
E S D + GV++ E+ G P D P + +VS G VR
Sbjct: 201 EIIL--SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS---GKVR 249
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 36.2 bits (82), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 10/113 (8%)
Query: 647 LAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPE 706
+LH S +I+RD+K ++ +D +++DFG AK G + G+P Y+ PE
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC-GTPEYLAPE 208
Query: 707 FAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVR 759
S D + GV++ E+ G P D P + +VS G VR
Sbjct: 209 IIL--SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS---GKVR 256
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 36.2 bits (82), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 10/113 (8%)
Query: 647 LAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPE 706
+LH S +I+RD+K ++ +D +++DFG AK G + G+P Y+ PE
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC-GTPEYLAPE 208
Query: 707 FAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVR 759
S D + GV++ E+ G P D P + +VS G VR
Sbjct: 209 IIL--SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS---GKVR 256
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 36.2 bits (82), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 10/113 (8%)
Query: 647 LAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPE 706
+LH S +I+RD+K ++ +D +++DFG AK G + G+P Y+ PE
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC-GTPEYLAPE 208
Query: 707 FAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVR 759
S D + GV++ E+ G P D P + +VS G VR
Sbjct: 209 IIL--SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS---GKVR 256
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 36.2 bits (82), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 10/113 (8%)
Query: 647 LAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPE 706
+LH S +I+RD+K ++ +D +++DFG AK G + G+P Y+ PE
Sbjct: 155 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC-GTPEYLAPE 209
Query: 707 FAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVR 759
S D + GV++ E+ G P D P + +VS G VR
Sbjct: 210 IIL--SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS---GKVR 257
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 36.2 bits (82), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 97/255 (38%), Gaps = 44/255 (17%)
Query: 509 NFDRGTLLAEGKFGPVY-RGFLPGGIHVAVKVLVHGSTLTDQEAAR---ELEYLGRIKHP 564
F+R L G FG V G H A+K+L + ++ E L + P
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 565 NLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNV 624
LV L Y + +N NL ++ +P G + ++ +
Sbjct: 102 FLVKLE------------YSFKDNSNLYMVMEYVPGG--------------EMFSHLRRI 135
Query: 625 GSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLA 684
G + +I L +LH S +I+RD+K ++ +D +++DFG A
Sbjct: 136 GRFSEPHARFYAAQIVL----TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
Query: 685 KIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPE 744
K G + G+P Y+ PE S D + GV++ E+ G P D P
Sbjct: 189 KRV-KGRTWXLC-GTPEYLAPEIIL--SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI 244
Query: 745 EKEGNLVSWVRGLVR 759
+ +VS G VR
Sbjct: 245 QIYEKIVS---GKVR 256
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 36.2 bits (82), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 10/113 (8%)
Query: 647 LAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPE 706
+LH S +I+RD+K ++ +D +++DFG AK G + G+P Y+ PE
Sbjct: 154 FEYLH---SLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRV-KGRTWXLC-GTPEYLAPE 208
Query: 707 FAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVR 759
S D + GV++ E+ G P D P + +VS G VR
Sbjct: 209 III--SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS---GKVR 256
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 36.2 bits (82), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 10/113 (8%)
Query: 647 LAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPE 706
+LH S +I+RD+K ++ +D +++DFG AK G + G+P Y+ PE
Sbjct: 155 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC-GTPEYLAPE 209
Query: 707 FAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVR 759
S D + GV++ E+ G P D P + +VS G VR
Sbjct: 210 IIL--SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS---GKVR 257
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 36.2 bits (82), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 97/256 (37%), Gaps = 44/256 (17%)
Query: 508 SNFDRGTLLAEGKFGPVY-RGFLPGGIHVAVKVLVHGSTLTDQEAAR---ELEYLGRIKH 563
F+R L G FG V G H A+K+L + ++ E L +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 564 PNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQN 623
P LV L Y + +N NL ++ +P G + ++
Sbjct: 101 PFLVKLE------------YSFKDNSNLYMVMEYVPGG--------------EMFSHLRR 134
Query: 624 VGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGL 683
+G + +I L +LH S +I+RD+K ++ +D +++DFG
Sbjct: 135 IGRFSEPHARFYAAQIVL----TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
Query: 684 AKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYP 743
AK G + G+P Y+ PE S D + GV++ E+ G P D P
Sbjct: 188 AKRV-KGRTWXLC-GTPEYLAPEIIL--SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
Query: 744 EEKEGNLVSWVRGLVR 759
+ +VS G VR
Sbjct: 244 IQIYEKIVS---GKVR 256
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 36.2 bits (82), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 98/256 (38%), Gaps = 44/256 (17%)
Query: 508 SNFDRGTLLAEGKFGPVY-RGFLPGGIHVAVKVLVHGSTLTDQEAAR---ELEYLGRIKH 563
F+R L G FG V + G H A+K+L + ++ E L +
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 86
Query: 564 PNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQN 623
P LV L + + +N NL ++ +P G + ++
Sbjct: 87 PFLVKLE------------FSFKDNSNLYMVMEYVPGG--------------EMFSHLRR 120
Query: 624 VGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGL 683
+G + +I L +LH S +I+RD+K ++ +D +++DFG
Sbjct: 121 IGRFSEPHARFYAAQIVL----TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGF 173
Query: 684 AKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYP 743
AK G + G+P Y+ PE S D + GV++ E+ G P D P
Sbjct: 174 AKRV-KGRTWTLC-GTPEYLAPEIIL--SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 229
Query: 744 EEKEGNLVSWVRGLVR 759
+ +VS G VR
Sbjct: 230 IQIYEKIVS---GKVR 242
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 36.2 bits (82), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 10/113 (8%)
Query: 647 LAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPE 706
+LH S +I+RD+K ++ +D +++DFG AK G + G+P Y+ PE
Sbjct: 155 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC-GTPEYLAPE 209
Query: 707 FAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVR 759
S D + GV++ E+ G P D P + +VS G VR
Sbjct: 210 IIL--SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS---GKVR 257
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 36.2 bits (82), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 10/113 (8%)
Query: 647 LAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPE 706
+LH S +I+RD+K ++ +D +++DFG AK G + G+P Y+ PE
Sbjct: 175 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC-GTPEYLAPE 229
Query: 707 FAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVR 759
S D + GV++ E+ G P D P + +VS G VR
Sbjct: 230 IIL--SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS---GKVR 277
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 36.2 bits (82), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 10/113 (8%)
Query: 647 LAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPE 706
+LH S +I+RD+K ++ +D +++DFG AK G + G+P Y+ PE
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC-GTPEYLAPE 208
Query: 707 FAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVR 759
S D + GV++ E+ G P D P + +VS G VR
Sbjct: 209 IIL--SKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVS---GKVR 256
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 36.2 bits (82), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 10/114 (8%)
Query: 646 ALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPP 705
+LH S +I+RD+K ++ +D +++DFG AK G + G+P Y+ P
Sbjct: 146 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC-GTPEYLAP 200
Query: 706 EFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVR 759
E S D + GV++ E+ G P D P + +VS G VR
Sbjct: 201 EIIL--SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS---GKVR 249
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 36.2 bits (82), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 12/97 (12%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLD------EEIARG 698
R L ++H S ++HRD+K S++ L+ + ++ DFGLA++ D E +A
Sbjct: 137 RGLKYIH---SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVA-- 191
Query: 699 SPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735
+ Y PE + T D++ G +L E+++ +
Sbjct: 192 TRWYRAPEIMLNSKGY-TKSIDIWSVGCILAEMLSNR 227
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 35.8 bits (81), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 103/254 (40%), Gaps = 49/254 (19%)
Query: 496 LNITFADLLSATSNFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKV--LVHGSTLTDQEAA 552
++++ A ++ + R T L EG +G VY+ VA+K L H A
Sbjct: 22 MSVSAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAI 81
Query: 553 RELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXX 612
RE+ L ++H N++ L + I++Y EN +L+ + P
Sbjct: 82 REVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNP------------- 127
Query: 613 XXXXXXNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYL-- 670
S++ + S F +++ G + F H S +HRD+K ++ L
Sbjct: 128 -----DVSMRVIKS--------FLYQLING----VNFCH---SRRCLHRDLKPQNLLLSV 167
Query: 671 -DMNLEP--RLSDFGLAKIFG---NGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCY 724
D + P ++ DFGLA+ FG EI + Y PPE + T D++
Sbjct: 168 SDASETPVLKIGDFGLARAFGIPIRQFTHEII--TLWYRPPEILLGSRHYST-SVDIWSI 224
Query: 725 GVVLLELITGKKPL 738
+ E++ K PL
Sbjct: 225 ACIWAEMLM-KTPL 237
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 35.8 bits (81), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 94/235 (40%), Gaps = 49/235 (20%)
Query: 516 LAEGKFGPVYRGFL--PGG--IHVAVKVLVHGSTLTDQEAA----RELEYLGRIKHPNLV 567
L +G FG V RG P G + VAVK L L+ EA RE+ + + H NL+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCL-KPDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 568 PLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSE 627
L G + ++ E L +LL L ++ G
Sbjct: 79 RLYGVVLTPPMKMVT----ELAPLGSLLDRLR----------------------KHQGHF 112
Query: 628 GLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIF 687
L T R+ A+ A + +L S IHRD+ A ++ L ++ DFGL +
Sbjct: 113 LLGTLSRY----AVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL 165
Query: 688 GNGLDEEIARGSPGYIPPEFAQPDS----DFPTPKSDVYCYGVVLLELIT-GKKP 737
D+ +P + P+S F + SD + +GV L E+ T G++P
Sbjct: 166 PQN-DDHYVMQEHRKVPFAWCAPESLKTRTF-SHASDTWMFGVTLWEMFTYGQEP 218
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 35.8 bits (81), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 28/41 (68%), Gaps = 3/41 (7%)
Query: 645 RALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAK 685
R L ++H S +IHRD+K S++ ++ N E ++ DFG+A+
Sbjct: 169 RGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMAR 206
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 35.8 bits (81), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 94/235 (40%), Gaps = 49/235 (20%)
Query: 516 LAEGKFGPVYRGFL--PGG--IHVAVKVLVHGSTLTDQEAA----RELEYLGRIKHPNLV 567
L +G FG V RG P G + VAVK L L+ EA RE+ + + H NL+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCL-KPDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 568 PLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQXXXXXXXXXXXXXXXNSIQNVGSE 627
L G + ++ E L +LL L ++ G
Sbjct: 79 RLYGVVLTPPMKMVT----ELAPLGSLLDRLR----------------------KHQGHF 112
Query: 628 GLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIF 687
L T R+ A+ A + +L S IHRD+ A ++ L ++ DFGL +
Sbjct: 113 LLGTLSRY----AVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL 165
Query: 688 GNGLDEEIARGSPGYIPPEFAQPDS----DFPTPKSDVYCYGVVLLELIT-GKKP 737
D+ +P + P+S F + SD + +GV L E+ T G++P
Sbjct: 166 PQN-DDHYVMQEHRKVPFAWCAPESLKTRTF-SHASDTWMFGVTLWEMFTYGQEP 218
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.135 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,537,733
Number of Sequences: 62578
Number of extensions: 984349
Number of successful extensions: 4993
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 626
Number of HSP's successfully gapped in prelim test: 504
Number of HSP's that attempted gapping in prelim test: 2456
Number of HSP's gapped (non-prelim): 1967
length of query: 815
length of database: 14,973,337
effective HSP length: 107
effective length of query: 708
effective length of database: 8,277,491
effective search space: 5860463628
effective search space used: 5860463628
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)