Query 003504
Match_columns 815
No_of_seqs 610 out of 5067
Neff 9.4
Searched_HMMs 46136
Date Fri Mar 29 00:41:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003504.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003504hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 6.3E-85 1.4E-89 804.9 59.2 730 5-813 46-953 (968)
2 KOG1187 Serine/threonine prote 100.0 1.7E-56 3.8E-61 479.3 28.3 288 494-812 61-353 (361)
3 KOG0192 Tyrosine kinase specif 100.0 7.3E-49 1.6E-53 416.7 22.0 257 511-814 44-306 (362)
4 KOG0197 Tyrosine kinases [Sign 100.0 4.5E-49 9.7E-54 414.7 16.0 250 513-813 211-463 (468)
5 KOG1026 Nerve growth factor re 100.0 1.5E-48 3.2E-53 430.3 12.8 271 506-814 484-765 (774)
6 KOG0581 Mitogen-activated prot 100.0 9.8E-47 2.1E-51 378.9 20.1 250 510-806 81-334 (364)
7 KOG0196 Tyrosine kinase, EPH ( 100.0 1E-46 2.2E-51 406.0 8.6 253 509-812 630-892 (996)
8 KOG0615 Serine/threonine prote 100.0 6E-46 1.3E-50 374.8 13.4 253 508-806 172-436 (475)
9 KOG0595 Serine/threonine-prote 100.0 5.6E-45 1.2E-49 368.9 16.4 203 507-744 9-220 (429)
10 KOG0575 Polo-like serine/threo 100.0 2.6E-44 5.6E-49 381.9 19.0 246 508-806 18-268 (592)
11 KOG1095 Protein tyrosine kinas 100.0 2.4E-43 5.1E-48 403.4 18.2 262 508-814 692-964 (1025)
12 KOG0591 NIMA (never in mitosis 100.0 2.2E-44 4.7E-49 345.7 5.3 248 508-801 19-275 (375)
13 KOG1094 Discoidin domain recep 100.0 9.3E-43 2E-47 364.0 15.9 263 506-811 536-804 (807)
14 KOG0193 Serine/threonine prote 100.0 9.4E-43 2E-47 367.6 14.3 263 502-812 386-654 (678)
15 KOG0598 Ribosomal protein S6 k 100.0 2.9E-42 6.4E-47 346.7 16.2 241 507-799 24-269 (357)
16 KOG0194 Protein tyrosine kinas 100.0 1.5E-42 3.2E-47 372.0 14.3 258 506-813 155-422 (474)
17 KOG0593 Predicted protein kina 100.0 5.2E-42 1.1E-46 332.6 12.6 265 508-806 2-283 (396)
18 KOG4194 Membrane glycoprotein 100.0 6.8E-43 1.5E-47 364.9 6.7 363 12-381 48-432 (873)
19 KOG0600 Cdc2-related protein k 100.0 8.6E-42 1.9E-46 353.3 14.6 264 508-806 117-399 (560)
20 KOG0582 Ste20-like serine/thre 100.0 8.6E-41 1.9E-45 340.7 20.7 261 507-806 25-292 (516)
21 KOG0198 MEKK and related serin 100.0 3.1E-41 6.7E-46 346.9 17.2 253 508-808 17-277 (313)
22 KOG4721 Serine/threonine prote 100.0 5.9E-42 1.3E-46 356.4 11.6 250 496-811 119-368 (904)
23 PHA02988 hypothetical protein; 100.0 1.9E-40 4.1E-45 350.3 22.4 250 513-813 25-281 (283)
24 KOG0578 p21-activated serine/t 100.0 3.9E-41 8.6E-46 354.8 16.2 248 508-806 273-522 (550)
25 KOG4278 Protein tyrosine kinas 100.0 6.6E-42 1.4E-46 358.5 9.9 260 501-812 260-524 (1157)
26 KOG0661 MAPK related serine/th 100.0 3.7E-42 8.1E-47 353.4 7.8 263 507-807 9-291 (538)
27 KOG0659 Cdk activating kinase 100.0 1E-40 2.2E-45 318.6 15.0 262 508-807 2-281 (318)
28 KOG0592 3-phosphoinositide-dep 100.0 5.4E-41 1.2E-45 350.2 14.2 248 506-806 71-337 (604)
29 cd05102 PTKc_VEGFR3 Catalytic 100.0 3.3E-40 7.2E-45 358.5 20.1 287 507-814 6-337 (338)
30 KOG2052 Activin A type IB rece 100.0 2E-39 4.2E-44 330.6 23.3 266 507-813 210-505 (513)
31 KOG4257 Focal adhesion tyrosin 100.0 1.3E-40 2.8E-45 349.8 14.4 256 506-813 387-651 (974)
32 KOG3653 Transforming growth fa 100.0 1.5E-39 3.3E-44 334.0 21.0 264 511-812 213-504 (534)
33 KOG0583 Serine/threonine prote 100.0 9.6E-40 2.1E-44 350.8 20.2 249 506-805 15-273 (370)
34 KOG0605 NDR and related serine 100.0 5.9E-40 1.3E-44 343.1 15.8 245 506-800 139-435 (550)
35 KOG0580 Serine/threonine prote 100.0 2.9E-40 6.2E-45 311.1 11.6 248 507-806 21-272 (281)
36 KOG0588 Serine/threonine prote 100.0 1.3E-39 2.7E-44 346.7 17.7 248 508-807 12-263 (786)
37 cd05631 STKc_GRK4 Catalytic do 100.0 3.4E-39 7.4E-44 341.6 19.8 250 510-806 2-260 (285)
38 cd05096 PTKc_DDR1 Catalytic do 100.0 7.6E-39 1.6E-43 342.4 21.8 277 508-810 5-304 (304)
39 KOG0597 Serine-threonine prote 100.0 9.1E-40 2E-44 340.5 13.9 245 508-806 2-250 (808)
40 KOG0616 cAMP-dependent protein 100.0 1.5E-39 3.3E-44 315.1 14.3 236 508-798 44-283 (355)
41 cd05064 PTKc_EphR_A10 Catalyti 100.0 5.6E-39 1.2E-43 336.5 18.8 253 508-811 5-265 (266)
42 KOG0201 Serine/threonine prote 100.0 4.1E-40 8.9E-45 336.0 8.9 247 509-807 14-263 (467)
43 cd05104 PTKc_Kit Catalytic dom 100.0 8.7E-39 1.9E-43 351.1 20.0 284 507-811 34-374 (375)
44 cd05114 PTKc_Tec_Rlk Catalytic 100.0 1E-38 2.3E-43 332.5 19.3 249 508-808 4-255 (256)
45 PLN00113 leucine-rich repeat r 100.0 4E-38 8.6E-43 389.0 27.9 348 27-383 235-611 (968)
46 PF07714 Pkinase_Tyr: Protein 100.0 1.1E-39 2.3E-44 340.2 10.9 246 513-808 4-259 (259)
47 cd05072 PTKc_Lyn Catalytic dom 100.0 1.5E-38 3.2E-43 332.4 19.0 253 508-811 6-261 (261)
48 cd05106 PTKc_CSF-1R Catalytic 100.0 1E-38 2.2E-43 350.1 18.5 285 507-812 37-373 (374)
49 KOG0658 Glycogen synthase kina 100.0 1.5E-39 3.2E-44 326.3 10.4 259 510-806 26-305 (364)
50 KOG0585 Ca2+/calmodulin-depend 100.0 1.2E-38 2.7E-43 326.9 16.5 253 505-807 94-372 (576)
51 cd05148 PTKc_Srm_Brk Catalytic 100.0 1.3E-38 2.8E-43 332.8 17.2 256 506-811 4-261 (261)
52 cd05052 PTKc_Abl Catalytic dom 100.0 3.4E-38 7.4E-43 330.0 19.6 253 508-811 6-262 (263)
53 cd05068 PTKc_Frk_like Catalyti 100.0 5.2E-38 1.1E-42 328.3 20.8 254 507-811 5-261 (261)
54 cd05571 STKc_PKB Catalytic dom 100.0 2.3E-38 4.9E-43 341.3 18.1 240 514-806 1-250 (323)
55 cd05612 STKc_PRKX_like Catalyt 100.0 1.3E-38 2.9E-43 338.0 15.9 244 508-806 1-253 (291)
56 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 2.5E-38 5.5E-43 342.8 18.3 252 509-807 2-257 (333)
57 KOG0611 Predicted serine/threo 100.0 1.2E-38 2.7E-43 319.3 14.1 245 509-806 54-302 (668)
58 cd06649 PKc_MEK2 Catalytic dom 100.0 4.1E-38 9E-43 340.5 19.4 262 507-807 4-301 (331)
59 cd05105 PTKc_PDGFR_alpha Catal 100.0 5.3E-38 1.1E-42 345.6 20.2 287 506-813 35-399 (400)
60 cd05108 PTKc_EGFR Catalytic do 100.0 3.7E-38 8.1E-43 338.9 18.6 254 508-813 7-270 (316)
61 KOG1025 Epidermal growth facto 100.0 4.4E-39 9.5E-44 348.1 11.2 249 512-812 700-958 (1177)
62 PTZ00263 protein kinase A cata 100.0 2.4E-38 5.1E-43 342.0 16.8 244 508-806 18-270 (329)
63 KOG0663 Protein kinase PITSLRE 100.0 4.2E-38 9.1E-43 309.6 16.9 259 508-806 76-360 (419)
64 cd05048 PTKc_Ror Catalytic Dom 100.0 5.9E-38 1.3E-42 332.0 19.4 268 508-811 5-283 (283)
65 KOG0199 ACK and related non-re 100.0 4.6E-39 9.9E-44 342.3 10.6 247 511-808 113-369 (1039)
66 cd07862 STKc_CDK6 Catalytic do 100.0 6.8E-38 1.5E-42 332.8 19.4 265 508-806 1-286 (290)
67 cd05093 PTKc_TrkB Catalytic do 100.0 9.7E-38 2.1E-42 331.2 20.6 267 508-813 5-281 (288)
68 cd05585 STKc_YPK1_like Catalyt 100.0 3.4E-38 7.3E-43 338.4 17.1 237 516-805 1-245 (312)
69 cd07871 STKc_PCTAIRE3 Catalyti 100.0 6.3E-38 1.4E-42 332.4 18.3 265 508-806 5-284 (288)
70 cd05595 STKc_PKB_beta Catalyti 100.0 6.6E-38 1.4E-42 337.6 18.7 240 514-806 1-250 (323)
71 cd05059 PTKc_Tec_like Catalyti 100.0 9.6E-38 2.1E-42 325.2 19.3 248 509-808 5-255 (256)
72 cd05033 PTKc_EphR Catalytic do 100.0 1.5E-37 3.3E-42 325.7 20.8 253 508-811 4-265 (266)
73 cd05113 PTKc_Btk_Bmx Catalytic 100.0 8.2E-38 1.8E-42 325.7 18.6 250 508-809 4-256 (256)
74 PTZ00426 cAMP-dependent protei 100.0 4.3E-38 9.3E-43 340.6 16.9 244 508-806 30-283 (340)
75 cd07848 STKc_CDKL5 Catalytic d 100.0 5.4E-38 1.2E-42 333.0 17.1 264 508-806 1-283 (287)
76 cd05094 PTKc_TrkC Catalytic do 100.0 1.3E-37 2.9E-42 330.6 19.9 270 508-813 5-284 (291)
77 cd05593 STKc_PKB_gamma Catalyt 100.0 1E-37 2.2E-42 336.6 19.3 240 514-806 1-250 (328)
78 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 1.9E-37 4.1E-42 323.8 20.6 251 508-810 6-259 (260)
79 cd08228 STKc_Nek6 Catalytic do 100.0 5E-37 1.1E-41 322.0 23.9 260 508-812 2-266 (267)
80 cd05605 STKc_GRK4_like Catalyt 100.0 1.4E-37 3.1E-42 329.1 19.9 251 509-806 1-260 (285)
81 cd05111 PTK_HER3 Pseudokinase 100.0 2.1E-37 4.6E-42 326.9 20.9 254 508-813 7-270 (279)
82 KOG0033 Ca2+/calmodulin-depend 100.0 1.4E-39 3E-44 306.3 3.4 250 508-806 11-266 (355)
83 cd05049 PTKc_Trk Catalytic dom 100.0 1.7E-37 3.8E-42 327.9 19.5 266 507-810 4-280 (280)
84 KOG0694 Serine/threonine prote 100.0 7.4E-38 1.6E-42 336.4 16.7 242 506-801 366-613 (694)
85 cd05071 PTKc_Src Catalytic dom 100.0 2.7E-37 5.8E-42 322.9 20.7 252 508-811 6-260 (262)
86 cd05067 PTKc_Lck_Blk Catalytic 100.0 2.8E-37 6E-42 322.6 20.6 253 507-811 5-260 (260)
87 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 2.2E-37 4.7E-42 327.7 20.1 265 510-812 6-282 (283)
88 KOG0599 Phosphorylase kinase g 100.0 3.1E-38 6.8E-43 301.5 12.2 252 508-806 17-282 (411)
89 PLN00034 mitogen-activated pro 100.0 1.5E-37 3.2E-42 339.4 19.4 248 509-807 75-328 (353)
90 cd06650 PKc_MEK1 Catalytic dom 100.0 4.1E-37 8.9E-42 332.7 22.2 200 507-741 4-205 (333)
91 cd05062 PTKc_IGF-1R Catalytic 100.0 1.9E-37 4.1E-42 327.1 18.8 263 506-810 4-277 (277)
92 cd05107 PTKc_PDGFR_beta Cataly 100.0 3E-37 6.6E-42 339.3 21.2 288 504-812 33-400 (401)
93 cd05089 PTKc_Tie1 Catalytic do 100.0 3E-37 6.6E-42 328.8 20.5 270 508-813 2-277 (297)
94 PTZ00267 NIMA-related protein 100.0 1.5E-37 3.3E-42 351.5 19.2 249 510-806 69-322 (478)
95 cd05069 PTKc_Yes Catalytic dom 100.0 3.8E-37 8.3E-42 321.5 20.6 252 508-811 6-260 (260)
96 cd05054 PTKc_VEGFR Catalytic d 100.0 2.8E-37 6E-42 334.2 20.1 287 507-814 6-336 (337)
97 cd05584 STKc_p70S6K Catalytic 100.0 2.5E-37 5.3E-42 333.3 19.4 240 514-806 2-255 (323)
98 cd05090 PTKc_Ror1 Catalytic do 100.0 2.7E-37 5.9E-42 326.9 19.2 268 508-810 5-282 (283)
99 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 1.4E-37 3.1E-42 329.2 16.9 262 508-812 4-284 (284)
100 cd05035 PTKc_Axl_like Catalyti 100.0 5.7E-37 1.2E-41 322.6 21.3 256 510-811 1-272 (273)
101 cd05045 PTKc_RET Catalytic dom 100.0 5.3E-37 1.1E-41 325.9 20.8 277 509-813 1-288 (290)
102 PTZ00036 glycogen synthase kin 100.0 1.3E-37 2.9E-42 347.9 16.9 265 507-806 65-350 (440)
103 KOG2345 Serine/threonine prote 100.0 6.3E-38 1.4E-42 296.6 11.8 265 507-812 20-301 (302)
104 cd05084 PTKc_Fes Catalytic dom 100.0 3.4E-37 7.3E-42 320.3 18.2 245 514-809 1-251 (252)
105 cd05043 PTK_Ryk Pseudokinase d 100.0 3.8E-37 8.2E-42 325.3 18.7 264 507-814 5-279 (280)
106 cd07869 STKc_PFTAIRE1 Catalyti 100.0 7.1E-37 1.5E-41 327.0 21.0 263 507-806 4-287 (303)
107 cd05594 STKc_PKB_alpha Catalyt 100.0 2E-37 4.2E-42 334.5 16.6 240 514-806 1-251 (325)
108 cd05614 STKc_MSK2_N N-terminal 100.0 4.3E-37 9.3E-42 333.1 19.3 250 509-806 1-266 (332)
109 cd05626 STKc_LATS2 Catalytic d 100.0 2.8E-37 6.1E-42 340.5 18.2 249 509-806 2-304 (381)
110 cd08229 STKc_Nek7 Catalytic do 100.0 6.8E-37 1.5E-41 321.0 20.2 260 508-812 2-266 (267)
111 cd06646 STKc_MAP4K5 Catalytic 100.0 8.3E-37 1.8E-41 320.3 20.9 255 508-808 9-266 (267)
112 cd05075 PTKc_Axl Catalytic dom 100.0 6.6E-37 1.4E-41 322.0 20.1 256 510-811 1-271 (272)
113 cd05589 STKc_PKN Catalytic dom 100.0 4.3E-37 9.2E-42 331.7 19.1 243 510-806 1-256 (324)
114 cd05116 PTKc_Syk Catalytic dom 100.0 3.8E-37 8.2E-42 320.9 17.9 244 515-811 2-255 (257)
115 cd05039 PTKc_Csk_like Catalyti 100.0 4.5E-37 9.8E-42 320.2 18.5 251 507-811 5-256 (256)
116 cd05063 PTKc_EphR_A2 Catalytic 100.0 6.7E-37 1.5E-41 321.2 19.8 254 507-811 4-267 (268)
117 cd05618 STKc_aPKC_iota Catalyt 100.0 8.8E-37 1.9E-41 329.6 21.2 243 514-801 1-250 (329)
118 cd05588 STKc_aPKC Catalytic do 100.0 8.6E-37 1.9E-41 329.8 21.1 248 514-806 1-261 (329)
119 cd08529 STKc_FA2-like Catalyti 100.0 9.1E-37 2E-41 317.8 20.6 249 509-807 1-253 (256)
120 cd05573 STKc_ROCK_NDR_like Cat 100.0 1.1E-37 2.3E-42 340.7 14.1 250 508-807 1-285 (350)
121 cd05053 PTKc_FGFR Catalytic do 100.0 5.7E-37 1.2E-41 326.2 19.4 272 505-812 9-292 (293)
122 cd05115 PTKc_Zap-70 Catalytic 100.0 8.2E-37 1.8E-41 318.3 20.1 245 515-811 2-255 (257)
123 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 3.1E-36 6.8E-41 315.9 24.5 260 508-812 2-266 (267)
124 cd07859 STKc_TDY_MAPK_plant Ca 100.0 3E-37 6.4E-42 335.6 17.2 263 509-806 1-289 (338)
125 cd05607 STKc_GRK7 Catalytic do 100.0 7E-37 1.5E-41 322.5 19.4 246 516-807 1-250 (277)
126 cd05092 PTKc_TrkA Catalytic do 100.0 7.9E-37 1.7E-41 322.8 19.8 266 508-810 5-280 (280)
127 cd05034 PTKc_Src_like Catalyti 100.0 9E-37 2E-41 318.9 20.0 254 507-811 5-261 (261)
128 KOG0594 Protein kinase PCTAIRE 100.0 3.6E-37 7.8E-42 310.3 16.2 265 509-807 12-302 (323)
129 cd05085 PTKc_Fer Catalytic dom 100.0 1.1E-36 2.3E-41 316.2 20.4 245 514-809 1-249 (250)
130 cd05088 PTKc_Tie2 Catalytic do 100.0 5.2E-37 1.1E-41 327.8 18.5 269 508-812 7-281 (303)
131 cd05091 PTKc_Ror2 Catalytic do 100.0 4.3E-37 9.2E-42 325.5 17.6 266 509-810 6-282 (283)
132 cd05055 PTKc_PDGFR Catalytic d 100.0 8.9E-37 1.9E-41 325.7 20.2 256 507-811 34-301 (302)
133 cd05628 STKc_NDR1 Catalytic do 100.0 4.5E-37 9.8E-42 336.7 18.3 200 508-742 1-240 (363)
134 KOG1989 ARK protein kinase fam 100.0 3.5E-37 7.6E-42 342.3 17.6 257 509-814 38-314 (738)
135 PTZ00283 serine/threonine prot 100.0 3E-37 6.4E-42 349.0 17.3 254 506-807 30-297 (496)
136 cd05590 STKc_nPKC_eta Catalyti 100.0 4.4E-37 9.6E-42 330.7 17.7 235 514-801 1-241 (320)
137 cd05066 PTKc_EphR_A Catalytic 100.0 8.8E-37 1.9E-41 320.1 19.5 253 508-811 4-266 (267)
138 cd05591 STKc_nPKC_epsilon Cata 100.0 5E-37 1.1E-41 330.7 18.0 240 514-806 1-253 (321)
139 cd06654 STKc_PAK1 Catalytic do 100.0 1.4E-36 3E-41 323.4 21.2 248 508-806 20-269 (296)
140 cd05592 STKc_nPKC_theta_delta 100.0 7.4E-37 1.6E-41 328.3 19.2 239 514-805 1-246 (316)
141 cd05587 STKc_cPKC Catalytic do 100.0 5.4E-37 1.2E-41 330.9 18.2 240 509-801 1-246 (324)
142 KOG0589 Serine/threonine prote 100.0 1.7E-37 3.7E-42 326.5 13.8 250 508-807 4-258 (426)
143 cd05599 STKc_NDR_like Catalyti 100.0 2.2E-37 4.8E-42 339.9 15.2 249 508-806 1-295 (364)
144 cd05036 PTKc_ALK_LTK Catalytic 100.0 6.6E-37 1.4E-41 322.9 18.2 258 507-809 5-276 (277)
145 cd05109 PTKc_HER2 Catalytic do 100.0 7.9E-37 1.7E-41 322.7 18.6 255 507-813 6-270 (279)
146 PHA03212 serine/threonine kina 100.0 1.5E-36 3.3E-41 334.0 21.3 257 508-806 92-375 (391)
147 cd05097 PTKc_DDR_like Catalyti 100.0 1.2E-36 2.7E-41 323.9 20.0 270 508-810 5-295 (295)
148 cd05101 PTKc_FGFR2 Catalytic d 100.0 1.4E-36 3.1E-41 324.9 20.5 271 507-813 14-298 (304)
149 cd05582 STKc_RSK_N N-terminal 100.0 1.7E-37 3.7E-42 334.0 13.5 237 514-803 2-245 (318)
150 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 9.4E-37 2E-41 320.8 18.8 240 515-809 2-274 (274)
151 cd05608 STKc_GRK1 Catalytic do 100.0 1.3E-36 2.8E-41 321.0 19.9 246 516-806 1-256 (280)
152 cd05616 STKc_cPKC_beta Catalyt 100.0 8.2E-37 1.8E-41 329.3 18.7 240 509-801 1-246 (323)
153 cd05047 PTKc_Tie Catalytic dom 100.0 1.2E-36 2.6E-41 319.5 19.6 263 514-812 1-269 (270)
154 cd05098 PTKc_FGFR1 Catalytic d 100.0 8.6E-37 1.9E-41 327.0 18.6 271 508-814 18-302 (307)
155 cd05082 PTKc_Csk Catalytic dom 100.0 1.5E-36 3.2E-41 316.3 19.9 249 508-811 6-256 (256)
156 cd05596 STKc_ROCK Catalytic do 100.0 4.5E-37 9.7E-42 336.9 16.7 253 506-806 41-303 (370)
157 cd05570 STKc_PKC Catalytic dom 100.0 7.3E-37 1.6E-41 328.8 18.0 240 514-806 1-251 (318)
158 cd05619 STKc_nPKC_theta Cataly 100.0 1.1E-36 2.3E-41 327.0 19.1 239 514-805 1-246 (316)
159 KOG4279 Serine/threonine prote 100.0 8.5E-38 1.8E-42 331.7 10.3 247 515-806 582-831 (1226)
160 cd06625 STKc_MEKK3_like Cataly 100.0 2.7E-36 5.9E-41 315.6 21.6 249 508-807 2-260 (263)
161 KOG1024 Receptor-like protein 100.0 2.5E-37 5.4E-42 309.2 13.0 272 498-813 274-557 (563)
162 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 4.9E-36 1.1E-40 314.8 23.5 255 514-809 1-268 (269)
163 cd05630 STKc_GRK6 Catalytic do 100.0 2E-36 4.4E-41 320.3 20.5 250 510-806 2-260 (285)
164 cd05065 PTKc_EphR_B Catalytic 100.0 1.2E-36 2.6E-41 319.4 18.7 252 509-811 5-268 (269)
165 cd05629 STKc_NDR_like_fungal C 100.0 3.5E-37 7.5E-42 339.6 15.2 250 508-807 1-305 (377)
166 cd05601 STKc_CRIK Catalytic do 100.0 2.8E-37 6E-42 334.3 14.1 252 508-806 1-262 (330)
167 cd06624 STKc_ASK Catalytic dom 100.0 1.8E-36 3.8E-41 318.0 19.8 259 503-806 3-264 (268)
168 cd05095 PTKc_DDR2 Catalytic do 100.0 2.8E-36 6E-41 321.3 21.5 269 508-810 5-296 (296)
169 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 1.7E-36 3.7E-41 316.7 19.6 240 514-808 1-261 (262)
170 cd06619 PKc_MKK5 Catalytic dom 100.0 5.2E-36 1.1E-40 316.3 23.4 250 509-807 2-253 (279)
171 cd05051 PTKc_DDR Catalytic dom 100.0 2.8E-36 6.1E-41 321.4 21.3 270 507-810 4-296 (296)
172 cd05073 PTKc_Hck Catalytic dom 100.0 2.3E-36 5E-41 315.6 20.0 253 507-811 5-260 (260)
173 cd05061 PTKc_InsR Catalytic do 100.0 1.5E-36 3.2E-41 322.1 18.8 264 506-811 4-278 (288)
174 KOG0574 STE20-like serine/thre 100.0 1.1E-38 2.3E-43 308.3 2.1 247 510-807 35-283 (502)
175 cd05617 STKc_aPKC_zeta Catalyt 100.0 3E-36 6.4E-41 325.3 21.2 242 514-801 1-248 (327)
176 cd06637 STKc_TNIK Catalytic do 100.0 1.5E-36 3.3E-41 319.3 18.4 253 506-806 4-268 (272)
177 cd05632 STKc_GRK5 Catalytic do 100.0 2.1E-36 4.5E-41 320.3 19.6 250 510-806 2-260 (285)
178 KOG0660 Mitogen-activated prot 100.0 3.4E-37 7.3E-42 308.8 12.5 262 507-806 21-309 (359)
179 cd05620 STKc_nPKC_delta Cataly 100.0 1.3E-36 2.8E-41 326.5 18.0 239 514-805 1-246 (316)
180 cd06612 STKc_MST1_2 Catalytic 100.0 2.4E-36 5.2E-41 314.6 19.5 248 508-806 3-252 (256)
181 cd05060 PTKc_Syk_like Catalyti 100.0 3E-36 6.5E-41 314.1 20.2 246 514-812 1-256 (257)
182 cd07853 STKc_NLK Catalytic dom 100.0 1.9E-36 4.2E-41 333.0 19.7 262 509-806 1-287 (372)
183 PHA03209 serine/threonine kina 100.0 3.6E-36 7.9E-41 328.5 21.4 193 505-738 63-256 (357)
184 cd05575 STKc_SGK Catalytic dom 100.0 1.1E-36 2.3E-41 328.4 17.1 236 514-802 1-242 (323)
185 cd05032 PTKc_InsR_like Catalyt 100.0 1.9E-36 4.1E-41 319.5 18.5 262 507-810 5-277 (277)
186 PRK13184 pknD serine/threonine 100.0 2.6E-36 5.7E-41 348.8 21.2 266 508-812 2-291 (932)
187 cd05112 PTKc_Itk Catalytic dom 100.0 2.3E-36 5.1E-41 314.8 18.9 249 508-808 4-255 (256)
188 cd05621 STKc_ROCK2 Catalytic d 100.0 1.5E-36 3.2E-41 332.4 18.1 256 504-807 39-304 (370)
189 cd05103 PTKc_VEGFR2 Catalytic 100.0 3E-36 6.6E-41 327.5 20.4 287 507-814 6-342 (343)
190 cd05598 STKc_LATS Catalytic do 100.0 6.9E-37 1.5E-41 337.3 15.4 250 508-807 1-301 (376)
191 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 1.5E-36 3.2E-41 321.4 17.3 259 509-811 5-283 (284)
192 cd05099 PTKc_FGFR4 Catalytic d 100.0 4.6E-36 9.9E-41 322.4 21.1 270 508-813 12-295 (314)
193 cd07863 STKc_CDK4 Catalytic do 100.0 3E-36 6.5E-41 319.9 19.5 264 509-806 1-284 (288)
194 cd05058 PTKc_Met_Ron Catalytic 100.0 3.6E-36 7.8E-41 314.6 19.8 249 514-813 1-261 (262)
195 cd05040 PTKc_Ack_like Catalyti 100.0 3.4E-36 7.4E-41 313.7 19.5 246 514-809 1-256 (257)
196 cd05056 PTKc_FAK Catalytic dom 100.0 3.9E-36 8.4E-41 315.8 19.8 255 508-814 6-268 (270)
197 cd05625 STKc_LATS1 Catalytic d 100.0 1.3E-36 2.9E-41 335.6 16.9 248 509-806 2-304 (382)
198 cd06643 STKc_SLK Catalytic dom 100.0 4.4E-36 9.6E-41 317.5 20.3 250 510-806 7-261 (282)
199 cd06656 STKc_PAK3 Catalytic do 100.0 4.8E-36 1E-40 319.4 20.6 248 508-806 19-268 (297)
200 cd06655 STKc_PAK2 Catalytic do 100.0 4.6E-36 9.9E-41 319.3 20.0 248 508-806 19-268 (296)
201 cd05050 PTKc_Musk Catalytic do 100.0 3.5E-36 7.5E-41 319.3 19.1 274 507-810 4-288 (288)
202 KOG0032 Ca2+/calmodulin-depend 100.0 4.6E-36 1E-40 321.8 20.0 251 507-807 34-293 (382)
203 cd08219 STKc_Nek3 Catalytic do 100.0 4.5E-36 9.7E-41 312.5 19.3 249 509-807 1-252 (255)
204 cd05615 STKc_cPKC_alpha Cataly 100.0 2.7E-36 5.8E-41 325.1 18.0 240 509-801 1-246 (323)
205 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 6.1E-36 1.3E-40 316.7 20.5 257 508-808 5-267 (284)
206 cd06615 PKc_MEK Catalytic doma 100.0 5.6E-36 1.2E-40 320.7 20.3 261 508-807 1-287 (308)
207 cd05604 STKc_SGK3 Catalytic do 100.0 1.3E-36 2.9E-41 328.0 15.5 239 514-805 1-245 (325)
208 cd07872 STKc_PCTAIRE2 Catalyti 100.0 4.8E-36 1E-40 321.5 19.6 265 508-806 6-285 (309)
209 cd00192 PTKc Catalytic domain 100.0 7.4E-36 1.6E-40 311.8 20.4 253 514-809 1-262 (262)
210 cd06644 STKc_STK10_LOK Catalyt 100.0 9.7E-36 2.1E-40 316.5 21.6 252 508-806 12-268 (292)
211 cd05057 PTKc_EGFR_like Catalyt 100.0 6.5E-36 1.4E-40 315.7 19.8 254 508-813 7-270 (279)
212 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 1.9E-36 4.1E-41 315.8 15.4 241 514-809 1-258 (258)
213 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 1.2E-35 2.5E-40 314.6 21.6 261 508-812 4-284 (284)
214 cd05041 PTKc_Fes_like Catalyti 100.0 6.3E-36 1.4E-40 310.5 19.1 245 514-809 1-250 (251)
215 cd07876 STKc_JNK2 Catalytic do 100.0 1.2E-35 2.5E-40 325.4 22.0 263 507-807 20-315 (359)
216 cd05602 STKc_SGK1 Catalytic do 100.0 2.8E-36 6.1E-41 325.5 16.6 239 514-805 1-245 (325)
217 KOG4194 Membrane glycoprotein 100.0 1E-37 2.2E-42 326.3 5.1 340 29-381 53-408 (873)
218 cd05603 STKc_SGK2 Catalytic do 100.0 3.2E-36 6.9E-41 324.6 16.9 236 514-802 1-242 (321)
219 PTZ00266 NIMA-related protein 100.0 4.4E-36 9.6E-41 348.1 18.7 258 506-806 11-294 (1021)
220 cd06628 STKc_MAPKKK_Byr2_like 100.0 1.4E-35 3E-40 311.1 20.8 246 509-806 1-263 (267)
221 PHA03211 serine/threonine kina 100.0 1.5E-35 3.3E-40 329.6 22.2 260 507-807 168-455 (461)
222 cd06638 STKc_myosinIIIA Cataly 100.0 5.5E-36 1.2E-40 317.5 17.9 263 500-807 10-283 (286)
223 cd06631 STKc_YSK4 Catalytic do 100.0 1.3E-35 2.8E-40 310.9 20.6 248 509-806 1-261 (265)
224 cd06639 STKc_myosinIIIB Cataly 100.0 7.5E-36 1.6E-40 317.3 18.9 264 498-806 12-286 (291)
225 cd05042 PTKc_Aatyk Catalytic d 100.0 8.2E-36 1.8E-40 313.1 19.0 255 514-809 1-268 (269)
226 cd05100 PTKc_FGFR3 Catalytic d 100.0 1.3E-35 2.7E-40 321.8 21.0 270 508-813 12-295 (334)
227 cd05622 STKc_ROCK1 Catalytic d 100.0 5.1E-36 1.1E-40 328.4 17.9 258 502-807 37-304 (371)
228 cd07874 STKc_JNK3 Catalytic do 100.0 7.6E-36 1.6E-40 326.4 19.0 264 506-807 15-311 (355)
229 cd06609 STKc_MST3_like Catalyt 100.0 1.5E-35 3.3E-40 312.0 20.6 246 509-806 2-250 (274)
230 cd07861 STKc_CDK1_euk Catalyti 100.0 9.6E-36 2.1E-40 315.5 19.2 263 509-806 1-281 (285)
231 cd08221 STKc_Nek9 Catalytic do 100.0 2E-35 4.3E-40 307.8 21.1 249 509-807 1-253 (256)
232 cd06613 STKc_MAP4K3_like Catal 100.0 2.3E-35 5E-40 308.4 21.6 254 508-806 3-259 (262)
233 cd06611 STKc_SLK_like Catalyti 100.0 7.3E-36 1.6E-40 315.5 18.0 254 507-807 4-262 (280)
234 cd05110 PTKc_HER4 Catalytic do 100.0 5.8E-36 1.3E-40 319.8 17.4 254 507-812 6-269 (303)
235 cd08528 STKc_Nek10 Catalytic d 100.0 1.3E-35 2.8E-40 311.6 19.8 256 509-810 1-269 (269)
236 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 2.2E-35 4.9E-40 307.9 21.2 240 514-809 1-259 (259)
237 cd07847 STKc_CDKL1_4 Catalytic 100.0 2.3E-35 4.9E-40 312.7 21.5 265 508-806 1-282 (286)
238 cd07873 STKc_PCTAIRE1 Catalyti 100.0 7.5E-36 1.6E-40 318.8 17.9 265 508-806 6-285 (301)
239 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 1.8E-35 3.9E-40 313.6 20.6 255 508-806 1-261 (286)
240 cd05083 PTKc_Chk Catalytic dom 100.0 1.2E-35 2.7E-40 309.0 18.7 247 508-810 6-253 (254)
241 cd06645 STKc_MAP4K3 Catalytic 100.0 1.6E-35 3.4E-40 310.6 19.5 253 508-806 9-264 (267)
242 cd06642 STKc_STK25-YSK1 Cataly 100.0 6.5E-36 1.4E-40 315.3 16.7 244 510-806 6-252 (277)
243 cd07875 STKc_JNK1 Catalytic do 100.0 1.5E-35 3.3E-40 325.1 20.2 262 507-806 23-317 (364)
244 cd08227 PK_STRAD_alpha Pseudok 100.0 1.3E-35 2.7E-40 320.8 19.1 261 512-806 2-306 (327)
245 cd05044 PTKc_c-ros Catalytic d 100.0 1.2E-35 2.6E-40 311.9 18.3 252 514-810 1-269 (269)
246 cd05627 STKc_NDR2 Catalytic do 100.0 3.9E-36 8.4E-41 329.1 15.1 249 508-806 1-292 (360)
247 KOG0200 Fibroblast/platelet-de 100.0 4.1E-36 8.9E-41 345.6 16.0 270 507-811 295-579 (609)
248 cd08220 STKc_Nek8 Catalytic do 100.0 2.9E-35 6.4E-40 306.4 20.8 248 509-806 1-252 (256)
249 PHA03207 serine/threonine kina 100.0 1.5E-35 3.1E-40 327.8 19.5 258 508-807 92-375 (392)
250 cd05597 STKc_DMPK_like Catalyt 100.0 3.3E-35 7.2E-40 317.7 21.9 255 508-807 1-266 (331)
251 cd05046 PTK_CCK4 Pseudokinase 100.0 1.8E-35 3.8E-40 311.7 19.0 260 508-809 5-274 (275)
252 cd06651 STKc_MEKK3 Catalytic d 100.0 3.9E-35 8.4E-40 307.4 21.4 247 508-806 2-260 (266)
253 cd07846 STKc_CDKL2_3 Catalytic 100.0 8.4E-36 1.8E-40 316.1 16.5 264 509-806 2-282 (286)
254 cd06636 STKc_MAP4K4_6 Catalyti 100.0 2E-35 4.4E-40 312.4 19.4 261 498-806 6-278 (282)
255 cd06640 STKc_MST4 Catalytic do 100.0 4.9E-35 1.1E-39 308.6 22.0 246 509-807 5-253 (277)
256 cd05086 PTKc_Aatyk2 Catalytic 100.0 4.1E-35 8.9E-40 307.5 21.1 253 515-809 2-267 (268)
257 cd06632 STKc_MEKK1_plant Catal 100.0 3.3E-35 7.1E-40 306.4 20.2 248 509-806 1-254 (258)
258 cd08218 STKc_Nek1 Catalytic do 100.0 2.6E-35 5.7E-40 306.9 19.3 248 509-806 1-252 (256)
259 cd08223 STKc_Nek4 Catalytic do 100.0 4.2E-35 9E-40 305.5 20.7 248 509-806 1-253 (257)
260 cd05074 PTKc_Tyro3 Catalytic d 100.0 3.9E-35 8.5E-40 308.7 20.0 256 510-811 1-272 (273)
261 PF00069 Pkinase: Protein kina 100.0 9.4E-36 2E-40 310.9 14.7 251 510-806 1-256 (260)
262 cd07841 STKc_CDK7 Catalytic do 100.0 6.9E-35 1.5E-39 311.0 21.6 265 509-807 1-282 (298)
263 KOG4717 Serine/threonine prote 100.0 1.6E-35 3.5E-40 305.0 15.9 248 508-806 18-269 (864)
264 cd06658 STKc_PAK5 Catalytic do 100.0 1E-35 2.2E-40 316.0 14.9 247 510-807 24-272 (292)
265 smart00219 TyrKc Tyrosine kina 100.0 5.9E-35 1.3E-39 304.4 20.3 249 510-808 1-258 (258)
266 cd07833 STKc_CDKL Catalytic do 100.0 2E-35 4.4E-40 313.5 17.0 264 509-806 2-284 (288)
267 cd06647 STKc_PAK_I Catalytic d 100.0 7.6E-35 1.6E-39 309.5 21.4 249 508-807 19-269 (293)
268 KOG0610 Putative serine/threon 100.0 2.4E-35 5.3E-40 298.8 16.4 248 509-805 78-390 (459)
269 cd05623 STKc_MRCK_alpha Cataly 100.0 6.2E-35 1.3E-39 315.9 20.7 255 508-807 1-266 (332)
270 cd07868 STKc_CDK8 Catalytic do 100.0 1.2E-34 2.7E-39 311.9 22.9 200 513-740 6-218 (317)
271 cd06608 STKc_myosinIII_like Ca 100.0 6.6E-35 1.4E-39 307.2 20.3 256 506-806 4-271 (275)
272 cd06659 STKc_PAK6 Catalytic do 100.0 2.9E-35 6.2E-40 313.3 17.3 245 512-807 25-271 (297)
273 cd06652 STKc_MEKK2 Catalytic d 100.0 1E-34 2.2E-39 304.2 21.1 247 508-806 2-260 (265)
274 cd06629 STKc_MAPKKK_Bck1_like 100.0 7.4E-35 1.6E-39 306.4 20.1 253 509-806 2-268 (272)
275 cd05624 STKc_MRCK_beta Catalyt 100.0 3.3E-35 7.2E-40 317.7 17.6 254 508-806 1-265 (331)
276 cd06610 STKc_OSR1_SPAK Catalyt 100.0 1.4E-34 3E-39 303.3 21.9 255 508-806 1-263 (267)
277 cd08217 STKc_Nek2 Catalytic do 100.0 7.9E-35 1.7E-39 304.7 19.8 254 509-807 1-262 (265)
278 cd05586 STKc_Sck1_like Catalyt 100.0 1.4E-35 3.1E-40 320.8 14.3 240 516-806 1-252 (330)
279 cd07843 STKc_CDC2L1 Catalytic 100.0 6.6E-35 1.4E-39 310.3 19.1 265 508-806 5-289 (293)
280 cd06617 PKc_MKK3_6 Catalytic d 100.0 1.3E-34 2.8E-39 306.4 21.3 254 508-806 1-260 (283)
281 cd06607 STKc_TAO Catalytic dom 100.0 1.4E-34 3.1E-39 309.8 21.7 248 508-807 15-267 (307)
282 cd07860 STKc_CDK2_3 Catalytic 100.0 4.7E-35 1E-39 310.0 17.7 261 509-806 1-280 (284)
283 cd07832 STKc_CCRK Catalytic do 100.0 5.6E-35 1.2E-39 309.8 18.1 260 509-806 1-281 (286)
284 cd06605 PKc_MAPKK Catalytic do 100.0 9E-35 2E-39 304.5 19.4 252 509-806 2-256 (265)
285 cd07867 STKc_CDC2L6 Catalytic 100.0 1.1E-34 2.4E-39 312.4 20.5 201 513-741 6-219 (317)
286 cd07839 STKc_CDK5 Catalytic do 100.0 5.4E-35 1.2E-39 309.5 17.6 261 509-806 1-280 (284)
287 cd05609 STKc_MAST Catalytic do 100.0 9.7E-35 2.1E-39 310.8 19.7 252 508-809 1-272 (305)
288 cd06917 STKc_NAK1_like Catalyt 100.0 1.4E-34 3.1E-39 305.2 20.5 247 509-806 2-254 (277)
289 cd07878 STKc_p38beta_MAPK11 Ca 100.0 6.8E-35 1.5E-39 317.4 18.5 263 506-806 13-297 (343)
290 cd06626 STKc_MEKK4 Catalytic d 100.0 2.4E-34 5.1E-39 301.1 21.6 251 509-806 1-260 (264)
291 cd07831 STKc_MOK Catalytic dom 100.0 7.3E-35 1.6E-39 308.2 17.8 261 510-806 1-278 (282)
292 cd06641 STKc_MST3 Catalytic do 100.0 1.6E-34 3.4E-39 304.7 20.2 246 509-807 5-253 (277)
293 cd05574 STKc_phototropin_like 100.0 1.2E-34 2.6E-39 311.9 19.6 249 509-806 2-288 (316)
294 cd06648 STKc_PAK_II Catalytic 100.0 1.7E-34 3.7E-39 305.7 20.3 246 510-806 21-268 (285)
295 cd06623 PKc_MAPKK_plant_like C 100.0 4.4E-34 9.6E-39 299.0 23.3 251 508-807 1-256 (264)
296 KOG0577 Serine/threonine prote 100.0 9.8E-36 2.1E-40 311.3 10.6 246 510-807 28-278 (948)
297 cd06630 STKc_MEKK1 Catalytic d 100.0 1.8E-34 3.9E-39 302.8 20.1 250 509-806 1-263 (268)
298 PTZ00284 protein kinase; Provi 100.0 3.2E-35 6.9E-40 332.7 15.4 266 502-806 123-437 (467)
299 cd05580 STKc_PKA Catalytic dom 100.0 1.2E-34 2.7E-39 307.7 18.8 243 508-805 1-252 (290)
300 cd06614 STKc_PAK Catalytic dom 100.0 2.6E-34 5.7E-39 304.6 20.9 251 506-806 17-269 (286)
301 cd06616 PKc_MKK4 Catalytic dom 100.0 1.1E-34 2.5E-39 307.7 17.9 259 509-807 5-267 (288)
302 cd07870 STKc_PFTAIRE2 Catalyti 100.0 4.3E-34 9.4E-39 303.7 21.6 265 506-806 3-287 (291)
303 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 8E-34 1.7E-38 301.0 23.3 260 509-806 2-265 (287)
304 cd07836 STKc_Pho85 Catalytic d 100.0 1.8E-34 4E-39 305.5 18.4 266 509-806 1-280 (284)
305 cd07835 STKc_CDK1_like Catalyt 100.0 1.8E-34 4E-39 305.3 18.1 260 510-806 1-279 (283)
306 cd05578 STKc_Yank1 Catalytic d 100.0 1.4E-34 3E-39 301.8 16.5 247 509-805 1-253 (258)
307 cd06635 STKc_TAO1 Catalytic do 100.0 6.5E-34 1.4E-38 306.0 22.1 247 510-808 27-278 (317)
308 KOG0667 Dual-specificity tyros 100.0 1.7E-34 3.7E-39 311.0 17.4 197 509-742 187-392 (586)
309 cd05122 PKc_STE Catalytic doma 100.0 6.1E-34 1.3E-38 295.5 21.1 249 509-806 1-250 (253)
310 cd08225 STKc_Nek5 Catalytic do 100.0 1.7E-34 3.7E-39 300.9 17.0 248 509-806 1-253 (257)
311 cd07844 STKc_PCTAIRE_like Cata 100.0 2.6E-34 5.7E-39 305.4 18.5 262 508-806 5-287 (291)
312 cd07840 STKc_CDK9_like Catalyt 100.0 2.4E-34 5.3E-39 304.9 18.0 263 510-806 1-283 (287)
313 KOG0579 Ste20-like serine/thre 100.0 1.3E-35 2.8E-40 312.0 7.6 249 511-806 35-288 (1187)
314 cd05572 STKc_cGK_PKG Catalytic 100.0 5.3E-34 1.1E-38 298.1 19.4 242 516-806 1-251 (262)
315 KOG0584 Serine/threonine prote 100.0 3.9E-35 8.4E-40 312.5 10.7 243 513-806 45-295 (632)
316 cd08226 PK_STRAD_beta Pseudoki 100.0 6.3E-34 1.4E-38 307.7 19.8 259 514-806 4-307 (328)
317 cd07830 STKc_MAK_like Catalyti 100.0 8.8E-34 1.9E-38 300.1 20.6 264 510-806 1-279 (283)
318 cd06606 STKc_MAPKKK Catalytic 100.0 1.8E-33 4E-38 293.2 22.5 248 509-806 1-256 (260)
319 cd07850 STKc_JNK Catalytic dom 100.0 4.3E-34 9.4E-39 312.2 18.6 262 507-806 15-310 (353)
320 cd06618 PKc_MKK7 Catalytic dom 100.0 1.3E-33 2.8E-38 300.8 21.1 254 508-807 15-273 (296)
321 cd05633 STKc_GRK3 Catalytic do 100.0 1.1E-33 2.3E-38 298.5 20.1 243 515-807 1-255 (279)
322 KOG4645 MAPKKK (MAP kinase kin 100.0 8.8E-36 1.9E-40 338.4 4.4 254 505-807 1232-1494(1509)
323 cd07837 STKc_CdkB_plant Cataly 100.0 5.2E-34 1.1E-38 303.8 17.7 264 508-806 1-290 (295)
324 cd05577 STKc_GRK Catalytic dom 100.0 8.1E-34 1.8E-38 299.3 19.0 244 516-806 1-253 (277)
325 KOG0586 Serine/threonine prote 100.0 2.9E-34 6.3E-39 305.7 15.6 248 507-806 55-305 (596)
326 KOG0596 Dual specificity; seri 100.0 9.9E-35 2.1E-39 303.2 11.7 251 507-806 360-626 (677)
327 cd07838 STKc_CDK4_6_like Catal 100.0 1.2E-33 2.7E-38 299.6 19.9 260 510-806 1-283 (287)
328 cd05613 STKc_MSK1_N N-terminal 100.0 1.6E-33 3.4E-38 299.3 20.7 251 509-806 1-267 (290)
329 PLN00009 cyclin-dependent kina 100.0 6.4E-34 1.4E-38 302.9 17.5 261 508-806 2-283 (294)
330 cd08530 STKc_CNK2-like Catalyt 100.0 6.8E-34 1.5E-38 296.1 17.3 249 509-806 1-252 (256)
331 cd08216 PK_STRAD Pseudokinase 100.0 2.6E-33 5.5E-38 301.3 22.2 260 512-806 6-294 (314)
332 cd07845 STKc_CDK10 Catalytic d 100.0 7.7E-34 1.7E-38 304.5 18.0 266 507-806 6-289 (309)
333 cd07864 STKc_CDK12 Catalytic d 100.0 9.7E-34 2.1E-38 302.8 18.4 263 505-806 4-298 (302)
334 cd07852 STKc_MAPK15 Catalytic 100.0 9.3E-34 2E-38 307.7 18.5 265 507-807 6-295 (337)
335 cd06657 STKc_PAK4 Catalytic do 100.0 6.5E-34 1.4E-38 302.0 16.8 243 513-806 25-269 (292)
336 PHA02882 putative serine/threo 100.0 1.7E-33 3.7E-38 299.2 19.8 254 508-809 12-294 (294)
337 cd06653 STKc_MEKK3_like_1 Cata 100.0 2.4E-33 5.2E-38 293.5 20.6 247 508-806 2-260 (264)
338 cd06627 STKc_Cdc7_like Catalyt 100.0 2.4E-33 5.2E-38 291.5 20.4 246 509-806 1-250 (254)
339 cd07842 STKc_CDK8_like Catalyt 100.0 1.8E-33 3.9E-38 302.8 19.7 268 509-806 1-312 (316)
340 cd07855 STKc_ERK5 Catalytic do 100.0 9.4E-34 2E-38 307.1 17.5 262 507-806 4-293 (334)
341 cd07849 STKc_ERK1_2_like Catal 100.0 9.7E-34 2.1E-38 307.3 17.6 261 507-807 4-292 (336)
342 cd08215 STKc_Nek Catalytic dom 100.0 2.3E-33 5.1E-38 292.2 19.7 250 509-806 1-254 (258)
343 cd05583 STKc_MSK_N N-terminal 100.0 1.2E-33 2.7E-38 299.8 17.7 255 509-810 1-266 (288)
344 KOG0983 Mitogen-activated prot 100.0 3.8E-34 8.2E-39 273.9 12.2 249 513-807 97-349 (391)
345 PHA03390 pk1 serine/threonine- 100.0 6.9E-33 1.5E-37 290.3 22.6 249 501-806 7-261 (267)
346 PTZ00024 cyclin-dependent prot 100.0 1.5E-33 3.3E-38 305.8 18.2 263 508-806 8-312 (335)
347 cd05611 STKc_Rim15_like Cataly 100.0 2.3E-33 5E-38 292.9 18.8 243 514-808 2-249 (260)
348 cd05579 STKc_MAST_like Catalyt 100.0 1.1E-33 2.3E-38 296.1 16.1 240 516-808 1-255 (265)
349 cd05118 STKc_CMGC Catalytic do 100.0 1.5E-33 3.1E-38 298.4 17.2 262 510-806 1-279 (283)
350 cd07865 STKc_CDK9 Catalytic do 100.0 2.9E-33 6.4E-38 300.2 19.7 262 507-806 11-306 (310)
351 cd06634 STKc_TAO2 Catalytic do 100.0 3.3E-33 7.1E-38 299.3 19.6 247 509-807 16-267 (308)
352 cd07858 STKc_TEY_MAPK_plant Ca 100.0 1E-33 2.2E-38 307.2 15.9 263 507-807 4-291 (337)
353 KOG4250 TANK binding protein k 100.0 5.3E-34 1.1E-38 307.5 12.9 266 512-811 17-310 (732)
354 cd05606 STKc_beta_ARK Catalyti 100.0 7.4E-33 1.6E-37 292.0 21.4 242 515-806 1-254 (278)
355 PHA03210 serine/threonine kina 100.0 1.2E-33 2.5E-38 320.8 16.2 264 507-806 147-453 (501)
356 cd07834 STKc_MAPK Catalytic do 100.0 1.1E-33 2.3E-38 306.5 15.1 268 509-811 1-295 (330)
357 cd06633 STKc_TAO3 Catalytic do 100.0 9.1E-33 2E-37 296.5 21.9 245 510-806 23-272 (313)
358 KOG0986 G protein-coupled rece 100.0 4E-34 8.6E-39 291.7 10.7 246 508-800 185-434 (591)
359 KOG1006 Mitogen-activated prot 100.0 2.6E-35 5.6E-40 281.0 1.3 254 513-806 69-326 (361)
360 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 6E-33 1.3E-37 299.5 18.4 267 503-807 5-288 (328)
361 cd07866 STKc_BUR1 Catalytic do 100.0 2.5E-33 5.5E-38 300.9 15.4 266 507-806 7-307 (311)
362 cd07829 STKc_CDK_like Catalyti 100.0 4.1E-33 8.8E-38 294.8 16.7 263 510-806 1-278 (282)
363 cd07879 STKc_p38delta_MAPK13 C 100.0 3.6E-33 7.9E-38 303.4 16.6 265 508-812 15-304 (342)
364 KOG0444 Cytoskeletal regulator 100.0 9.5E-36 2.1E-40 312.9 -5.3 340 27-376 6-373 (1255)
365 cd08222 STKc_Nek11 Catalytic d 100.0 9.1E-33 2E-37 288.5 17.0 249 509-806 1-256 (260)
366 cd05581 STKc_PDK1 Catalytic do 100.0 6E-33 1.3E-37 293.1 15.4 246 508-806 1-276 (280)
367 cd07854 STKc_MAPK4_6 Catalytic 100.0 9E-33 2E-37 300.3 17.1 263 508-806 5-299 (342)
368 cd07857 STKc_MPK1 Catalytic do 100.0 1.7E-32 3.8E-37 297.0 18.3 262 509-806 1-291 (332)
369 cd07877 STKc_p38alpha_MAPK14 C 100.0 4.3E-32 9.3E-37 295.2 20.2 268 500-806 9-299 (345)
370 KOG0612 Rho-associated, coiled 100.0 8.1E-34 1.8E-38 318.5 6.7 257 501-805 68-336 (1317)
371 KOG0607 MAP kinase-interacting 100.0 1.3E-32 2.9E-37 268.7 13.0 266 499-806 74-360 (463)
372 cd05123 STKc_AGC Catalytic dom 100.0 4.1E-32 8.8E-37 281.7 17.5 235 516-803 1-240 (250)
373 cd07880 STKc_p38gamma_MAPK12 C 100.0 6.8E-32 1.5E-36 293.4 19.8 262 506-806 13-297 (343)
374 cd07851 STKc_p38 Catalytic dom 100.0 1.8E-32 3.9E-37 298.1 14.9 261 507-806 14-297 (343)
375 KOG0587 Traf2- and Nck-interac 100.0 3.2E-32 7E-37 299.0 16.0 262 498-806 9-281 (953)
376 KOG1035 eIF-2alpha kinase GCN2 100.0 1.6E-32 3.4E-37 310.7 13.6 282 506-806 477-870 (1351)
377 KOG0666 Cyclin C-dependent kin 100.0 1.2E-32 2.6E-37 268.2 10.9 203 508-740 24-242 (438)
378 KOG0604 MAP kinase-activated p 100.0 1.3E-32 2.8E-37 266.8 10.8 252 507-806 60-321 (400)
379 KOG0662 Cyclin-dependent kinas 100.0 2E-32 4.3E-37 246.1 10.8 261 509-806 3-282 (292)
380 KOG0690 Serine/threonine prote 100.0 7.5E-33 1.6E-37 270.7 8.6 240 507-799 167-411 (516)
381 cd05610 STKc_MASTL Catalytic d 100.0 1E-31 2.2E-36 314.4 19.1 145 508-685 4-152 (669)
382 cd05576 STKc_RPK118_like Catal 100.0 2.2E-31 4.8E-36 273.7 16.7 220 519-802 4-224 (237)
383 KOG0696 Serine/threonine prote 100.0 5.8E-32 1.3E-36 272.1 8.7 240 507-799 348-593 (683)
384 KOG4236 Serine/threonine prote 100.0 1.5E-31 3.2E-36 276.6 10.2 243 513-805 569-817 (888)
385 smart00220 S_TKc Serine/Threon 100.0 3.6E-30 7.8E-35 265.3 20.6 237 520-806 1-240 (244)
386 KOG1151 Tousled-like protein k 100.0 1.5E-31 3.3E-36 271.1 9.9 254 509-805 464-739 (775)
387 KOG0669 Cyclin T-dependent kin 100.0 8.7E-33 1.9E-37 261.5 0.7 265 509-807 18-315 (376)
388 PLN03224 probable serine/threo 100.0 1.3E-30 2.9E-35 289.0 18.2 282 506-806 143-499 (507)
389 KOG0603 Ribosomal protein S6 k 100.0 2E-31 4.3E-36 285.7 10.9 239 507-806 321-562 (612)
390 KOG0472 Leucine-rich repeat pr 100.0 2E-33 4.3E-38 282.4 -4.6 201 28-235 68-292 (565)
391 KOG0444 Cytoskeletal regulator 100.0 3.7E-33 8E-38 293.5 -3.6 328 32-373 59-394 (1255)
392 KOG0984 Mitogen-activated prot 100.0 2.6E-31 5.7E-36 244.6 8.3 204 508-740 46-254 (282)
393 PLN03225 Serine/threonine-prot 100.0 3.6E-30 7.8E-35 293.5 17.8 279 506-807 130-450 (566)
394 KOG0668 Casein kinase II, alph 100.0 7.7E-31 1.7E-35 245.0 8.7 256 507-806 37-321 (338)
395 KOG0608 Warts/lats-like serine 100.0 2.6E-30 5.7E-35 272.7 13.3 213 508-755 629-888 (1034)
396 KOG1027 Serine/threonine prote 100.0 1.5E-30 3.3E-35 284.6 11.0 241 512-805 513-765 (903)
397 KOG0614 cGMP-dependent protein 100.0 2.6E-31 5.6E-36 274.2 3.1 241 509-800 421-665 (732)
398 KOG0695 Serine/threonine prote 100.0 2.2E-29 4.8E-34 247.1 12.7 248 507-799 249-502 (593)
399 KOG0671 LAMMER dual specificit 100.0 4.1E-30 8.8E-35 258.5 7.4 263 507-806 88-405 (415)
400 KOG0472 Leucine-rich repeat pr 100.0 4.3E-31 9.2E-36 265.7 -7.3 332 33-379 142-542 (565)
401 KOG0664 Nemo-like MAPK-related 100.0 1.5E-29 3.3E-34 242.0 3.0 265 509-808 54-344 (449)
402 KOG0618 Serine/threonine phosp 99.9 3.2E-30 6.9E-35 284.6 -3.8 342 28-377 45-488 (1081)
403 cd00180 PKc Catalytic domain o 99.9 9.5E-27 2.1E-31 234.0 20.1 210 516-807 1-214 (215)
404 KOG1152 Signal transduction se 99.9 8.7E-28 1.9E-32 252.1 9.3 198 507-739 560-770 (772)
405 KOG0576 Mitogen-activated prot 99.9 4.8E-28 1E-32 258.2 6.4 254 507-806 14-270 (829)
406 smart00221 STYKc Protein kinas 99.9 2.2E-26 4.8E-31 234.3 17.6 198 510-740 1-202 (225)
407 KOG0665 Jun-N-terminal kinase 99.9 5.2E-27 1.1E-31 230.8 9.0 259 509-806 18-309 (369)
408 KOG4237 Extracellular matrix p 99.9 1.1E-28 2.4E-33 248.3 -3.5 293 31-330 49-358 (498)
409 KOG1345 Serine/threonine kinas 99.9 3.9E-26 8.5E-31 218.9 10.9 251 509-806 25-283 (378)
410 PRK15387 E3 ubiquitin-protein 99.9 4.8E-25 1E-29 252.7 18.8 260 54-357 202-462 (788)
411 KOG1290 Serine/threonine prote 99.9 4.4E-25 9.5E-30 228.1 16.2 133 507-671 77-222 (590)
412 KOG0618 Serine/threonine phosp 99.9 5.9E-28 1.3E-32 266.8 -5.3 343 29-379 22-466 (1081)
413 KOG0195 Integrin-linked kinase 99.9 2.4E-26 5.2E-31 220.0 5.9 250 513-812 195-447 (448)
414 PRK15387 E3 ubiquitin-protein 99.9 1.3E-24 2.8E-29 249.1 18.8 267 22-336 197-463 (788)
415 KOG1167 Serine/threonine prote 99.9 1.5E-25 3.3E-30 229.1 9.2 261 505-806 33-380 (418)
416 PLN00181 protein SPA1-RELATED; 99.9 1.4E-25 3.1E-30 269.4 7.5 193 560-806 28-264 (793)
417 KOG0670 U4/U6-associated splic 99.9 1.5E-25 3.2E-30 232.4 6.3 201 507-742 431-639 (752)
418 smart00750 KIND kinase non-cat 99.9 3.2E-24 7E-29 209.6 14.5 159 628-813 11-171 (176)
419 KOG4237 Extracellular matrix p 99.9 1.6E-25 3.6E-30 225.5 0.8 302 56-364 49-370 (498)
420 PRK09188 serine/threonine prot 99.9 5E-23 1.1E-27 219.2 15.2 164 506-712 16-196 (365)
421 PRK15370 E3 ubiquitin-protein 99.9 2.1E-23 4.6E-28 241.1 12.9 245 54-353 179-428 (754)
422 PLN03210 Resistant to P. syrin 99.9 7E-22 1.5E-26 244.6 24.6 314 44-374 549-878 (1153)
423 PLN03210 Resistant to P. syrin 99.9 8.1E-22 1.8E-26 244.1 24.5 318 43-376 579-904 (1153)
424 PRK15370 E3 ubiquitin-protein 99.9 8.5E-23 1.8E-27 236.1 11.8 253 21-307 173-428 (754)
425 KOG1023 Natriuretic peptide re 99.9 6.3E-22 1.4E-26 213.8 13.3 217 558-812 1-225 (484)
426 KOG1164 Casein kinase (serine/ 99.8 1.7E-20 3.7E-25 201.1 18.2 257 509-812 19-298 (322)
427 COG0515 SPS1 Serine/threonine 99.8 5.8E-20 1.3E-24 198.8 21.2 261 510-807 2-275 (384)
428 cd05147 RIO1_euk RIO kinase fa 99.8 4.9E-20 1.1E-24 180.7 11.2 141 513-688 2-168 (190)
429 KOG0590 Checkpoint kinase and 99.8 8.9E-21 1.9E-25 215.5 6.5 251 512-806 322-584 (601)
430 PRK10359 lipopolysaccharide co 99.8 3.2E-20 7E-25 183.3 8.4 171 506-732 29-216 (232)
431 KOG1163 Casein kinase (serine/ 99.8 7.3E-20 1.6E-24 173.2 9.2 256 507-809 14-282 (341)
432 PRK12274 serine/threonine prot 99.8 2.2E-19 4.8E-24 173.1 12.7 185 511-740 5-209 (218)
433 cd05145 RIO1_like RIO kinase f 99.8 3E-19 6.6E-24 176.0 14.0 140 513-689 2-169 (190)
434 cd00116 LRR_RI Leucine-rich re 99.8 8.1E-21 1.8E-25 204.6 1.2 129 33-161 3-150 (319)
435 KOG1165 Casein kinase (serine/ 99.8 1.2E-18 2.5E-23 172.6 14.7 256 509-811 29-299 (449)
436 KOG4158 BRPK/PTEN-induced prot 99.8 2E-19 4.3E-24 181.8 8.5 196 562-808 274-511 (598)
437 KOG0617 Ras suppressor protein 99.8 3.8E-21 8.2E-26 172.5 -4.8 162 49-214 29-191 (264)
438 cd00116 LRR_RI Leucine-rich re 99.8 7.9E-20 1.7E-24 196.9 2.6 105 57-161 2-121 (319)
439 KOG0617 Ras suppressor protein 99.8 1E-20 2.2E-25 169.7 -4.0 157 71-231 28-186 (264)
440 KOG0603 Ribosomal protein S6 k 99.8 1.7E-19 3.7E-24 194.3 4.2 225 515-801 1-232 (612)
441 PF14531 Kinase-like: Kinase-l 99.8 9.2E-19 2E-23 178.3 8.9 236 512-798 16-288 (288)
442 PRK10345 hypothetical protein; 99.7 1.1E-17 2.5E-22 165.2 13.5 136 511-684 5-156 (210)
443 KOG1240 Protein kinase contain 99.7 9.7E-19 2.1E-23 197.3 3.9 249 509-809 24-293 (1431)
444 KOG1166 Mitotic checkpoint ser 99.7 3.3E-17 7.1E-22 189.4 13.1 196 503-736 693-901 (974)
445 smart00090 RIO RIO-like kinase 99.7 5.3E-17 1.2E-21 164.8 12.2 143 508-688 28-199 (237)
446 cd05144 RIO2_C RIO kinase fami 99.7 1.2E-16 2.6E-21 159.0 12.8 145 502-689 9-177 (198)
447 PRK14879 serine/threonine prot 99.7 1.2E-16 2.6E-21 160.9 12.6 134 514-686 2-143 (211)
448 KOG0606 Microtubule-associated 99.7 3.3E-17 7.1E-22 185.1 6.0 206 507-799 82-304 (1205)
449 PRK09605 bifunctional UGMP fam 99.7 2E-16 4.4E-21 181.3 12.3 136 508-686 333-476 (535)
450 TIGR03724 arch_bud32 Kae1-asso 99.7 3.1E-16 6.8E-21 156.3 11.2 130 515-686 1-138 (199)
451 KOG1033 eIF-2alpha kinase PEK/ 99.6 1.7E-16 3.7E-21 168.2 5.5 172 578-804 330-509 (516)
452 cd05119 RIO RIO kinase family, 99.6 1.1E-14 2.4E-19 143.6 11.0 136 513-688 2-165 (187)
453 PRK01723 3-deoxy-D-manno-octul 99.5 4.4E-14 9.6E-19 143.8 13.5 136 513-687 36-192 (239)
454 cd05120 APH_ChoK_like Aminogly 99.5 3.4E-14 7.3E-19 134.7 11.7 135 512-686 2-138 (155)
455 KOG0532 Leucine-rich repeat (L 99.5 5.4E-16 1.2E-20 164.1 -4.2 212 57-304 54-270 (722)
456 COG4886 Leucine-rich repeat (L 99.5 1.9E-13 4.1E-18 151.6 10.3 197 104-312 97-295 (394)
457 PLN03150 hypothetical protein; 99.5 2.5E-13 5.3E-18 157.5 11.5 106 56-161 421-528 (623)
458 KOG0590 Checkpoint kinase and 99.4 1.9E-14 4.1E-19 164.1 2.0 252 509-805 21-284 (601)
459 COG4886 Leucine-rich repeat (L 99.4 1.1E-13 2.3E-18 153.7 7.8 197 80-288 97-295 (394)
460 KOG0532 Leucine-rich repeat (L 99.4 3.9E-15 8.4E-20 157.7 -4.4 180 51-237 73-253 (722)
461 TIGR01982 UbiB 2-polyprenylphe 99.4 8E-13 1.7E-17 146.3 11.4 142 513-689 122-309 (437)
462 KOG1266 Protein kinase [Signal 99.4 6.3E-13 1.4E-17 132.2 6.3 203 555-807 118-331 (458)
463 PF14580 LRR_9: Leucine-rich r 99.4 4.3E-13 9.3E-18 127.3 4.7 34 192-225 109-147 (175)
464 PLN03150 hypothetical protein; 99.3 2.9E-12 6.3E-17 148.6 11.3 110 271-381 419-530 (623)
465 PF14580 LRR_9: Leucine-rich r 99.3 9.9E-13 2.1E-17 124.9 5.7 139 59-204 3-148 (175)
466 KOG0531 Protein phosphatase 1, 99.3 3E-13 6.6E-18 150.1 -0.2 266 54-357 50-322 (414)
467 KOG1909 Ran GTPase-activating 99.3 1.8E-13 3.8E-18 137.7 -2.2 252 48-331 25-311 (382)
468 KOG3207 Beta-tubulin folding c 99.3 5.8E-13 1.3E-17 137.5 0.0 87 246-332 246-340 (505)
469 KOG1259 Nischarin, modulator o 99.3 8.6E-13 1.9E-17 129.3 1.0 134 172-336 283-417 (490)
470 KOG0531 Protein phosphatase 1, 99.3 4.6E-13 1E-17 148.6 -1.2 248 50-335 69-322 (414)
471 KOG3207 Beta-tubulin folding c 99.2 2E-12 4.3E-17 133.6 2.3 208 145-378 118-339 (505)
472 KOG1259 Nischarin, modulator o 99.2 1.8E-12 4E-17 127.1 1.5 204 71-309 209-414 (490)
473 cd05151 ChoK Choline Kinase (C 99.2 3.1E-11 6.7E-16 116.9 10.0 130 513-685 3-135 (170)
474 KOG0601 Cyclin-dependent kinas 99.2 2.9E-11 6.4E-16 131.4 8.3 247 509-805 115-377 (524)
475 PRK04750 ubiB putative ubiquin 99.2 1.3E-11 2.9E-16 137.9 5.0 147 508-689 120-316 (537)
476 KOG1243 Protein kinase [Genera 99.2 5.3E-10 1.1E-14 122.7 15.3 166 529-735 34-200 (690)
477 KOG1909 Ran GTPase-activating 99.1 6.3E-12 1.4E-16 126.6 0.3 246 72-353 26-311 (382)
478 KOG0601 Cyclin-dependent kinas 99.1 3.6E-11 7.7E-16 130.8 6.0 251 505-812 262-519 (524)
479 cd05146 RIO3_euk RIO kinase fa 99.1 1.8E-09 3.9E-14 104.8 13.6 137 514-689 3-176 (197)
480 cd05154 ACAD10_11_like Acyl-Co 99.0 1.3E-09 2.9E-14 110.5 11.6 142 514-686 4-206 (223)
481 PF13855 LRR_8: Leucine rich r 99.0 2.8E-10 6E-15 89.0 3.4 59 77-135 2-60 (61)
482 COG3642 Mn2+-dependent serine/ 99.0 3.9E-09 8.5E-14 98.4 10.8 131 514-686 2-140 (204)
483 KOG4658 Apoptotic ATPase [Sign 99.0 2.9E-10 6.3E-15 134.6 4.2 103 54-157 546-651 (889)
484 PF13855 LRR_8: Leucine rich r 99.0 4.5E-10 9.7E-15 87.8 3.3 61 100-160 1-61 (61)
485 KOG0606 Microtubule-associated 98.9 2.4E-10 5.1E-15 130.5 2.2 247 506-802 802-1084(1205)
486 KOG4658 Apoptotic ATPase [Sign 98.9 1.4E-09 3.1E-14 128.8 7.2 152 49-203 519-675 (889)
487 KOG3087 Serine/threonine prote 98.9 1.5E-08 3.2E-13 93.9 10.1 143 512-686 11-165 (229)
488 KOG3741 Poly(A) ribonuclease s 98.8 1.2E-07 2.5E-12 101.2 15.1 180 521-736 289-474 (655)
489 COG4248 Uncharacterized protei 98.8 7.3E-08 1.6E-12 99.9 12.9 270 511-814 14-303 (637)
490 PF01163 RIO1: RIO1 family; I 98.7 6.5E-08 1.4E-12 93.7 11.1 126 523-688 1-157 (188)
491 COG5238 RNA1 Ran GTPase-activa 98.7 1.1E-09 2.4E-14 106.6 -1.3 217 49-283 26-285 (388)
492 KOG1859 Leucine-rich repeat pr 98.7 2.8E-10 6.1E-15 124.3 -6.9 177 48-232 104-293 (1096)
493 PRK15123 lipopolysaccharide co 98.7 1.5E-07 3.4E-12 96.8 12.4 142 513-686 27-194 (268)
494 KOG2982 Uncharacterized conser 98.7 3.4E-09 7.3E-14 104.6 -0.4 62 246-307 199-262 (418)
495 KOG2137 Protein kinase [Signal 98.6 1.1E-08 2.5E-13 112.9 2.7 149 640-805 105-263 (700)
496 KOG2982 Uncharacterized conser 98.6 6.3E-09 1.4E-13 102.7 0.3 108 53-160 45-158 (418)
497 KOG1859 Leucine-rich repeat pr 98.6 8.1E-10 1.8E-14 120.8 -8.4 129 54-187 165-293 (1096)
498 KOG4579 Leucine-rich repeat (L 98.5 8.9E-09 1.9E-13 90.1 -3.2 125 102-230 29-158 (177)
499 COG0478 RIO-like serine/threon 98.5 1.2E-06 2.6E-11 87.0 10.9 135 510-686 93-251 (304)
500 COG5238 RNA1 Ran GTPase-activa 98.4 7.5E-08 1.6E-12 94.0 1.4 199 142-378 86-316 (388)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=6.3e-85 Score=804.90 Aligned_cols=730 Identities=30% Similarity=0.504 Sum_probs=438.2
Q ss_pred ccccccc-CCCCcceeeeEecCCCCeEEEEecCCCCCccCCCcccccCCCCCCEEECcCCCCC-CCCcccC-CCCCCCEE
Q 003504 5 SFQASYF-SASFCSWRGVVCDSNKQHVTDFLASNSGLSGSVPDTTIGKLSKLQSLDLSENNIT-ALPSDLW-SLGSLKSL 81 (815)
Q Consensus 5 ~~~~~~~-~~~~c~w~gv~C~~~~~~~~~l~~~~~~~~g~~~~~~~~~l~~L~~L~Ls~n~l~-~lp~~~~-~l~~L~~L 81 (815)
.+.++|. +.+||.|.||.|+.. .+|+.++++++++.|.+++ .|..+++|+.|+|++|+++ .+|..++ .+++|++|
T Consensus 46 ~~~~~w~~~~~~c~w~gv~c~~~-~~v~~L~L~~~~i~~~~~~-~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L 123 (968)
T PLN00113 46 KYLSNWNSSADVCLWQGITCNNS-SRVVSIDLSGKNISGKISS-AIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYL 123 (968)
T ss_pred ccCCCCCCCCCCCcCcceecCCC-CcEEEEEecCCCccccCCh-HHhCCCCCCEEECCCCccCCcCChHHhccCCCCCEE
Confidence 3457885 468999999999853 4899999999998887765 6888888888888888886 5776665 45555555
Q ss_pred EccCCcC----------------------CccCCccccCCCCCcEEEccCCcCCCCChhhhcCCcCCCEEEcCCCccccc
Q 003504 82 NLSYNRI----------------------SGSLPSNIGNFGLLEVFDLSNNNFSGEIPAAISSLVSLRVLKLDGNMFQWS 139 (815)
Q Consensus 82 ~L~~N~i----------------------~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 139 (815)
+|++|++ ++..|..|+++++|++|+|++|.+++..|.+|.++++|++|+|++|++++.
T Consensus 124 ~Ls~n~l~~~~p~~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ 203 (968)
T PLN00113 124 NLSNNNFTGSIPRGSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQ 203 (968)
T ss_pred ECcCCccccccCccccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCc
Confidence 5555544 445566666777777777777777767777777777777777777777666
Q ss_pred CCcccccccccceeeccCCcCCCCCCchhhccCCCCCEEEcCCCcccC-CCCCCCCCCCCCeEeccCCcCCCcchhhh--
Q 003504 140 IPPGLLNCQSLVTVDLSMNQLNGSLPDGFGAAFPKLKSLNLAGNEIKG-RDTHFAGLKSITNLNISGNLFQGSVMGVF-- 216 (815)
Q Consensus 140 ~~~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~-- 216 (815)
+|..|.++++|++|+|++|++++.+|..+ ..+++|++|+|++|.+++ .+..|.++++|++|+|++|.+.+..+..+
T Consensus 204 ~p~~l~~l~~L~~L~L~~n~l~~~~p~~l-~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~ 282 (968)
T PLN00113 204 IPRELGQMKSLKWIYLGYNNLSGEIPYEI-GGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFS 282 (968)
T ss_pred CChHHcCcCCccEEECcCCccCCcCChhH-hcCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhh
Confidence 66666666777777777776666666554 346666666666666653 34445555555555555555544332222
Q ss_pred hcccceeeeccccccCccccc--------------------ccc------------------------cccCCccceEEE
Q 003504 217 LESLEVIDLRSNQFQGHISQV--------------------QFN------------------------SSYNWSRLVYVD 252 (815)
Q Consensus 217 l~~L~~L~L~~N~l~~~~~~~--------------------~~~------------------------~~~~l~~L~~L~ 252 (815)
+++|+.|+|++|.+.+.++.. ... .+..+++|+.|+
T Consensus 283 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~ 362 (968)
T PLN00113 283 LQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLD 362 (968)
T ss_pred ccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEE
Confidence 344444444444443322110 000 112223344444
Q ss_pred cCCCccCcchhhc------------------------cccCCCCCEEEecCCcCcCCCcccccc----------------
Q 003504 253 LSENQLSGEIFHN------------------------FSQAQNLKHLSLAYNRFTRQEFPQIGT---------------- 292 (815)
Q Consensus 253 Ls~N~l~~~~~~~------------------------~~~l~~L~~L~L~~N~l~~~~~~~~~~---------------- 292 (815)
+++|.+.+.+|.. +..+++|+.|+|++|++++..+..+..
T Consensus 363 Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 442 (968)
T PLN00113 363 LSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQG 442 (968)
T ss_pred CCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccC
Confidence 4444333222211 112222222222222221111111111
Q ss_pred -------------------------------ccCCCeEecCCCcCcCCCchhhhcCCCCCEEeCCCCcCCCCCCcc--CC
Q 003504 293 -------------------------------LLGLEHLNLSRTSLIGDIPSEILQLSSLHTLDLSMNHLTGQIPTV--SA 339 (815)
Q Consensus 293 -------------------------------l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~--~~ 339 (815)
.++|+.|++++|++.+.+|..+..+++|+.|+|++|++++.+|.. .+
T Consensus 443 ~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 522 (968)
T PLN00113 443 RINSRKWDMPSLQMLSLARNKFFGGLPDSFGSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSC 522 (968)
T ss_pred ccChhhccCCCCcEEECcCceeeeecCcccccccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCc
Confidence 112333333344444444444444455555555555555444432 33
Q ss_pred C------------------------CccEEEccCCcCcccCChHHhhcCCCCceeeccCCCCcccCCCCCc-cccc-ccc
Q 003504 340 K------------------------NLGIIDMSHNNLSGEIPASLLEKLPQMERFNFSYNNLTLCASELSP-ETLQ-TAF 393 (815)
Q Consensus 340 ~------------------------~L~~L~ls~N~l~~~~p~~~~~~l~~l~~l~l~~N~l~~~~~~~~~-~~~~-~~~ 393 (815)
+ +|+.|+|++|+++|.+|. .+..++.|+.+++++|+++.+.+.... .+.. ..+
T Consensus 523 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~l~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~ 601 (968)
T PLN00113 523 KKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPK-NLGNVESLVQVNISHNHLHGSLPSTGAFLAINASAV 601 (968)
T ss_pred cCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCCh-hHhcCcccCEEeccCCcceeeCCCcchhcccChhhh
Confidence 4 444555555555444442 233444555555555554432221100 0000 011
Q ss_pred ccCCCCCCCC---CCCCcccccccccccchhHHHHHHHHHHHHHHHHHhhhhccccCCcceeccccchhhcccCCCcccc
Q 003504 394 FGSSNDCPIA---ANPSFFKRKAANHKGLKLALALTLSMICLLAGLLCLAFGCRRKPKRWVVKQTSYKEEQNVSGPFSFQ 470 (815)
Q Consensus 394 ~~~~~~c~~~---~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~rk~~~~~~~~~~~~~~~~~~~~~~~~ 470 (815)
.+...-|... +.++.....+ ...+.++++++++++++++++++++++++++++.. .+.. + ...
T Consensus 602 ~~n~~lc~~~~~~~~~~c~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~-~~~------ 667 (968)
T PLN00113 602 AGNIDLCGGDTTSGLPPCKRVRK--TPSWWFYITCTLGAFLVLALVAFGFVFIRGRNNLE-LKRV----E-NED------ 667 (968)
T ss_pred cCCccccCCccccCCCCCccccc--cceeeeehhHHHHHHHHHHHHHHHHHHHHhhhccc-cccc----c-ccc------
Confidence 1111123211 1111111111 11111222222222222222222333333322111 1100 0 000
Q ss_pred cCCcchhhcccccCcceEEEec-cCccccCHHHHHHHhcCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCcccH
Q 003504 471 TDSTTWVADVKHANSVQVVIFE-KPLLNITFADLLSATSNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGSTLTD 548 (815)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~ 548 (815)
..|.. ..+. .....++++++. ..|...+.||+|+||.||+|+. .++..||||++.....
T Consensus 668 ---~~~~~----------~~~~~~~~~~~~~~~~~---~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--- 728 (968)
T PLN00113 668 ---GTWEL----------QFFDSKVSKSITINDIL---SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS--- 728 (968)
T ss_pred ---ccccc----------cccccccchhhhHHHHH---hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc---
Confidence 00100 0011 111224445543 3577788999999999999995 6789999999865322
Q ss_pred HHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCC
Q 003504 549 QEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEG 628 (815)
Q Consensus 549 ~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (815)
...+|++++++++|||||+++|+|.+.+..++||||+++|+|.++++.
T Consensus 729 -~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~------------------------------- 776 (968)
T PLN00113 729 -IPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRN------------------------------- 776 (968)
T ss_pred -ccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHhc-------------------------------
Confidence 223568899999999999999999999999999999999999999953
Q ss_pred cccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCceEEcCCCCeeecccccceecCCCCccccccccccccCCccc
Q 003504 629 LLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFA 708 (815)
Q Consensus 629 ~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~ 708 (815)
++|..+.+|+.|+|+||+|||+.++++|+||||||+||+++.++.+++. ||.+..... .....|++.|+|||++
T Consensus 777 --l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~---~~~~~~t~~y~aPE~~ 850 (968)
T PLN00113 777 --LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT---DTKCFISSAYVAPETR 850 (968)
T ss_pred --CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccccc---CCCccccccccCcccc
Confidence 6799999999999999999998778899999999999999999988876 665544322 1223588999999998
Q ss_pred CCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCC--CCHHHHHHHHHH
Q 003504 709 QPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDT--GPEKQMEEALKI 786 (815)
Q Consensus 709 ~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l 786 (815)
.+.. ++.++|||||||++|||++|+.||+... .....+.+|++...........+|+.+... .+.++..++.++
T Consensus 851 ~~~~--~~~~sDv~S~Gvvl~el~tg~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 926 (968)
T PLN00113 851 ETKD--ITEKSDIYGFGLILIELLTGKSPADAEF--GVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNL 926 (968)
T ss_pred cCCC--CCcccchhhHHHHHHHHHhCCCCCCccc--CCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHH
Confidence 7665 7899999999999999999999996432 234567888876655555555666666432 345677889999
Q ss_pred HhhccccCCCCCCCHHHHHHHHHhhhh
Q 003504 787 GYLCTADLPLKRPSMQQIVGLLKDIES 813 (815)
Q Consensus 787 ~~~Cl~~dP~~RPs~~~v~~~L~~i~~ 813 (815)
+.+||+.||++||+|+||+++|+++.+
T Consensus 927 ~~~Cl~~~P~~RPt~~evl~~L~~~~~ 953 (968)
T PLN00113 927 ALHCTATDPTARPCANDVLKTLESASR 953 (968)
T ss_pred HHhhCcCCchhCcCHHHHHHHHHHhhc
Confidence 999999999999999999999998854
No 2
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-56 Score=479.28 Aligned_cols=288 Identities=43% Similarity=0.761 Sum_probs=253.5
Q ss_pred CccccCHHHHHHHhcCCCCCCeecccCCeeeEEEEcCCCcEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCceeeeeEE
Q 003504 494 PLLNITFADLLSATSNFDRGTLLAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYC 573 (815)
Q Consensus 494 ~~~~~~~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~ 573 (815)
+...|++.++..||++|...+.||+|+||.||+|.+++|+.||||++.........+|.+|++++.+++|||+|+++|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 45679999999999999999999999999999999999999999988764433155699999999999999999999999
Q ss_pred EeCC-eeEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhc
Q 003504 574 IAGD-QRIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHH 652 (815)
Q Consensus 574 ~~~~-~~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~ 652 (815)
.+.+ ++++|||||++|+|.++|+... .. +++|..|++||.++|+||+|||+
T Consensus 141 ~e~~~~~~LVYEym~nGsL~d~L~~~~---------------------------~~-~L~W~~R~kIa~g~A~gL~yLH~ 192 (361)
T KOG1187|consen 141 LEGGEHRLLVYEYMPNGSLEDHLHGKK---------------------------GE-PLDWETRLKIALGAARGLAYLHE 192 (361)
T ss_pred ecCCceEEEEEEccCCCCHHHHhCCCC---------------------------CC-CCCHHHHHHHHHHHHHHHHHHcc
Confidence 9988 5999999999999999998631 11 78999999999999999999999
Q ss_pred CCCCCeeeccCCCCceEEcCCCCeeecccccceecCC-CCccccc-cccccccCCcccCCCCCCCCCcCcchhHHHHHHH
Q 003504 653 GCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGN-GLDEEIA-RGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLE 730 (815)
Q Consensus 653 ~~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~-~~~~~~~-~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~e 730 (815)
.+.++||||||||+|||+|+++++||+|||+|+.... ....... .||.+|+|||++.... .++|+|||||||+|+|
T Consensus 193 ~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~--lt~KsDVySFGVvllE 270 (361)
T KOG1187|consen 193 GCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGK--LTEKSDVYSFGVVLLE 270 (361)
T ss_pred CCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCccccceeeecCCCCccCChhhhccCC--cCcccccccchHHHHH
Confidence 9999999999999999999999999999999976654 3333333 7999999999998755 7999999999999999
Q ss_pred HHhCCCCCCCCCCccccccHHHHHHHHHhcCCCCcccccccc-CCCCH-HHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 003504 731 LITGKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIR-DTGPE-KQMEEALKIGYLCTADLPLKRPSMQQIVGLL 808 (815)
Q Consensus 731 l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L 808 (815)
++||++|.+... ......+..|+...+......+++||.+. ...+. .....+..++.+|++.+|.+||+|.||+++|
T Consensus 271 litgr~~~d~~~-~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L 349 (361)
T KOG1187|consen 271 LITGRKAVDQSR-PRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKEL 349 (361)
T ss_pred HHhCCcccCCCC-CcccccHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHH
Confidence 999999887533 23344599999999999899999999987 44443 6888999999999999999999999999999
Q ss_pred Hhhh
Q 003504 809 KDIE 812 (815)
Q Consensus 809 ~~i~ 812 (815)
+.+.
T Consensus 350 ~~~~ 353 (361)
T KOG1187|consen 350 EGIL 353 (361)
T ss_pred Hhhc
Confidence 7765
No 3
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-49 Score=416.69 Aligned_cols=257 Identities=32% Similarity=0.473 Sum_probs=212.9
Q ss_pred CCCCeecccCCeeeEEEEcCCCcEEEEEEeecCCccc--HHHHHHHHHHhcCCCCCCceeeeeEEEeCC-eeEEEEEeCC
Q 003504 511 DRGTLLAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLT--DQEAARELEYLGRIKHPNLVPLTGYCIAGD-QRIAIYDYME 587 (815)
Q Consensus 511 ~~~~~ig~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~--~~~~~~E~~~l~~l~H~niv~l~g~~~~~~-~~~lv~ey~~ 587 (815)
...+.||+|+||+||+|.+.+...||||++....... .+.|.+|+.+|.+++|||||+++|+|.+.. ..++|||||+
T Consensus 44 ~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~ 123 (362)
T KOG0192|consen 44 PIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMP 123 (362)
T ss_pred hhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCC
Confidence 3356699999999999999866669999997643322 458999999999999999999999999887 7999999999
Q ss_pred CCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCC-eeeccCCCC
Q 003504 588 NGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPP-IIHRDIKAS 666 (815)
Q Consensus 588 ~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~-ivHrDlk~~ 666 (815)
+|+|.++++.. ....++|..+++||.|||+||.||| +.+ ||||||||+
T Consensus 124 ~GsL~~~l~~~----------------------------~~~~l~~~~~l~~aldiArGm~YLH---~~~~iIHrDLK~~ 172 (362)
T KOG0192|consen 124 GGSLSVLLHKK----------------------------RKRKLPLKVRLRIALDIARGMEYLH---SEGPIIHRDLKSD 172 (362)
T ss_pred CCcHHHHHhhc----------------------------ccCCCCHHHHHHHHHHHHHHHHHHh---cCCCeeecccChh
Confidence 99999999862 2457999999999999999999999 666 999999999
Q ss_pred ceEEcCCC-CeeecccccceecCCC-CccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCc
Q 003504 667 SVYLDMNL-EPRLSDFGLAKIFGNG-LDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPE 744 (815)
Q Consensus 667 NIll~~~~-~~kl~Dfgla~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~ 744 (815)
|||++.++ ++||+|||+++..... .......||+.|||||++......++.|+|||||||++|||+||+.||.+..+.
T Consensus 173 NiLv~~~~~~~KI~DFGlsr~~~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~ 252 (362)
T KOG0192|consen 173 NILVDLKGKTLKIADFGLSREKVISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPV 252 (362)
T ss_pred hEEEcCCCCEEEECCCccceeeccccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHH
Confidence 99999997 9999999999987654 233446799999999999854222899999999999999999999999864331
Q ss_pred cccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhhhhc
Q 003504 745 EKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDIEST 814 (815)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~~~ 814 (815)
..+...... ..+...+..++..+..++.+||..||++||++.+++..|+.+..+
T Consensus 253 -------~~~~~v~~~---------~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~ 306 (362)
T KOG0192|consen 253 -------QVASAVVVG---------GLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSH 306 (362)
T ss_pred -------HHHHHHHhc---------CCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHh
Confidence 111112211 222333445788899999999999999999999999999988653
No 4
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-49 Score=414.72 Aligned_cols=250 Identities=30% Similarity=0.459 Sum_probs=216.5
Q ss_pred CCeecccCCeeeEEEEcCCCcEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeCCCCChh
Q 003504 513 GTLLAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQ 592 (815)
Q Consensus 513 ~~~ig~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL~ 592 (815)
.+.||+|-||+||.|.+++..+||||.++.. ....+.|.+|+++|.+|+|+|||+++|+|..+++.+||||||+.|+|.
T Consensus 211 ~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~-~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~GsLl 289 (468)
T KOG0197|consen 211 IRELGSGQFGEVWLGKWNGSTKVAVKTIKEG-SMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGSLL 289 (468)
T ss_pred HHHhcCCccceEEEEEEcCCCcccceEEecc-ccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCcHH
Confidence 5789999999999999998889999999874 566788999999999999999999999999988999999999999999
Q ss_pred hhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCceEEcC
Q 003504 593 NLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDM 672 (815)
Q Consensus 593 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NIll~~ 672 (815)
+||+.. ++..+...+.+.+|.|||+||+||+ ++++|||||.++||||++
T Consensus 290 ~yLr~~----------------------------~~~~l~~~~Ll~~a~qIaeGM~YLe---s~~~IHRDLAARNiLV~~ 338 (468)
T KOG0197|consen 290 DYLRTR----------------------------EGGLLNLPQLLDFAAQIAEGMAYLE---SKNYIHRDLAARNILVDE 338 (468)
T ss_pred HHhhhc----------------------------CCCccchHHHHHHHHHHHHHHHHHH---hCCccchhhhhhheeecc
Confidence 999862 3556788889999999999999999 899999999999999999
Q ss_pred CCCeeecccccceecCCCC--ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCCcccccc
Q 003504 673 NLEPRLSDFGLAKIFGNGL--DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGN 749 (815)
Q Consensus 673 ~~~~kl~Dfgla~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~~~~~~ 749 (815)
+..+||+|||+|+....+. ......-...|.|||.+.-.. ++.|||||||||+|||++| |+.||.+....+.
T Consensus 339 ~~~vKIsDFGLAr~~~d~~Y~~~~~~kfPIkWtAPEa~~~~~--FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev--- 413 (468)
T KOG0197|consen 339 DLVVKISDFGLARLIGDDEYTASEGGKFPIKWTAPEALNYGK--FSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEV--- 413 (468)
T ss_pred CceEEEcccccccccCCCceeecCCCCCCceecCHHHHhhCC--cccccceeehhhhHHHHhccCCCCCCCCCHHHH---
Confidence 9999999999999544332 112222356899999998776 8999999999999999999 9999876432211
Q ss_pred HHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhhhh
Q 003504 750 LVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDIES 813 (815)
Q Consensus 750 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~~ 813 (815)
.+.++.+.+...|+.|+.++.++|..||+.+|++||||+.+...|+++..
T Consensus 414 --------------~~~le~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~ 463 (468)
T KOG0197|consen 414 --------------LELLERGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFT 463 (468)
T ss_pred --------------HHHHhccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhh
Confidence 22345566777789999999999999999999999999999999998864
No 5
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.5e-48 Score=430.26 Aligned_cols=271 Identities=27% Similarity=0.376 Sum_probs=219.8
Q ss_pred HhcCCCCCCeecccCCeeeEEEEcC------CCcEEEEEEeecCCcc-cHHHHHHHHHHhcCCCCCCceeeeeEEEeCCe
Q 003504 506 ATSNFDRGTLLAEGKFGPVYRGFLP------GGIHVAVKVLVHGSTL-TDQEAARELEYLGRIKHPNLVPLTGYCIAGDQ 578 (815)
Q Consensus 506 ~~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~ 578 (815)
...+....+.||+|+||+||+|+.. +.+.||||.+++.+.. ..++|+||+++++.++|||||+++|+|.++++
T Consensus 484 ~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P 563 (774)
T KOG1026|consen 484 PRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDP 563 (774)
T ss_pred chhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCe
Confidence 3445566789999999999999843 3567999999887665 67899999999999999999999999999999
Q ss_pred eEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCe
Q 003504 579 RIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPI 658 (815)
Q Consensus 579 ~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~i 658 (815)
.++|+|||..|||.+||+...+...... .... ...+++-.+.+.||.|||.||+||- ++.+
T Consensus 564 ~~MvFEYm~~GDL~eFLra~sP~a~~~~---------------~g~~-~~~~L~~~q~L~iA~QIAaGM~YLs---~~~F 624 (774)
T KOG1026|consen 564 LCMVFEYMDHGDLHEFLRARSPKADKLA---------------SGQD-TPPPLSTSQFLHIATQIAAGMEYLS---SHHF 624 (774)
T ss_pred eEEEEEecccccHHHHHHhhCCcccccc---------------CCCC-CCCCCCHHHHHHHHHHHHHHHHHHH---hCcc
Confidence 9999999999999999986532211110 0000 1446889999999999999999999 8999
Q ss_pred eeccCCCCceEEcCCCCeeecccccceecCCCCccc---cccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-C
Q 003504 659 IHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEE---IARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-G 734 (815)
Q Consensus 659 vHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g 734 (815)
|||||.++|+||+++..+||+|||+++..-..+-.. ...-..+|||||.+.-++ ++++||||||||||||+++ |
T Consensus 625 VHRDLATRNCLVge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~k--FTteSDVWs~GVvLWEIFsyG 702 (774)
T KOG1026|consen 625 VHRDLATRNCLVGENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGK--FTTESDVWSFGVVLWEIFSYG 702 (774)
T ss_pred cccchhhhhceeccceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCc--ccchhhhhhhhhhhhhhhccc
Confidence 999999999999999999999999999753322111 112357899999988666 8999999999999999999 9
Q ss_pred CCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhhhhc
Q 003504 735 KKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDIEST 814 (815)
Q Consensus 735 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~~~ 814 (815)
+.||.+...++. .+ +++. ..+ ..+|++|+.++.+||..||+..|++||+|+||-..|+...+.
T Consensus 703 ~QPy~glSn~EV----Ie----~i~~--------g~l-L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~ 765 (774)
T KOG1026|consen 703 KQPYYGLSNQEV----IE----CIRA--------GQL-LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQA 765 (774)
T ss_pred cCcccccchHHH----HH----HHHc--------CCc-ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhc
Confidence 999987544332 22 2222 222 456999999999999999999999999999999999887654
No 6
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=9.8e-47 Score=378.90 Aligned_cols=250 Identities=28% Similarity=0.423 Sum_probs=210.6
Q ss_pred CCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecC-CcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCC-eeEEEEEeC
Q 003504 510 FDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHG-STLTDQEAARELEYLGRIKHPNLVPLTGYCIAGD-QRIAIYDYM 586 (815)
Q Consensus 510 ~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~-~~~lv~ey~ 586 (815)
.+....||+|..|+|||+.+ .+++.+|+|++... .....+++.+|++++++.+||+||.++|+|.... +..++||||
T Consensus 81 le~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYM 160 (364)
T KOG0581|consen 81 LERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYM 160 (364)
T ss_pred hhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhc
Confidence 34468999999999999996 46888999999543 3445678999999999999999999999999988 599999999
Q ss_pred CCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCC
Q 003504 587 ENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKAS 666 (815)
Q Consensus 587 ~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~ 666 (815)
++|||+.++.. ...++....-+||.+|.+||.|||+ +++||||||||+
T Consensus 161 DgGSLd~~~k~------------------------------~g~i~E~~L~~ia~~VL~GL~YLh~--~~~IIHRDIKPs 208 (364)
T KOG0581|consen 161 DGGSLDDILKR------------------------------VGRIPEPVLGKIARAVLRGLSYLHE--ERKIIHRDIKPS 208 (364)
T ss_pred CCCCHHHHHhh------------------------------cCCCCHHHHHHHHHHHHHHHHHHhh--ccCeeeccCCHH
Confidence 99999999974 2356778888999999999999995 489999999999
Q ss_pred ceEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCccc
Q 003504 667 SVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEK 746 (815)
Q Consensus 667 NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~ 746 (815)
|||++..|++||+|||.++.+.+. .....+||..|||||.+.+.. |+.++||||||++++|+.+|+.||... .+.
T Consensus 209 NlLvNskGeVKicDFGVS~~lvnS-~a~tfvGT~~YMsPERi~g~~--Ys~~sDIWSLGLsllE~a~GrfP~~~~--~~~ 283 (364)
T KOG0581|consen 209 NLLVNSKGEVKICDFGVSGILVNS-IANTFVGTSAYMSPERISGES--YSVKSDIWSLGLSLLELAIGRFPYPPP--NPP 283 (364)
T ss_pred HeeeccCCCEEeccccccHHhhhh-hcccccccccccChhhhcCCc--CCcccceecccHHHHHHhhCCCCCCCc--CCC
Confidence 999999999999999999988765 556788999999999999887 799999999999999999999999753 222
Q ss_pred cccHHHHHHHHHhcCCCCccccccccCCCCH-HHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 747 EGNLVSWVRGLVRNNKGSRAIDPKIRDTGPE-KQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 747 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
.....+.+..+..+. .|.+ |. .+++++..++..|+++||.+||+++|+++
T Consensus 284 ~~~~~~Ll~~Iv~~p------pP~l----P~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~ 334 (364)
T KOG0581|consen 284 YLDIFELLCAIVDEP------PPRL----PEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQ 334 (364)
T ss_pred CCCHHHHHHHHhcCC------CCCC----CcccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 334444444443322 1222 33 47889999999999999999999999975
No 7
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=1e-46 Score=406.03 Aligned_cols=253 Identities=26% Similarity=0.394 Sum_probs=217.1
Q ss_pred CCCCCCeecccCCeeeEEEEcC----CCcEEEEEEeecCCccc-HHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEE
Q 003504 509 NFDRGTLLAEGKFGPVYRGFLP----GGIHVAVKVLVHGSTLT-DQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIY 583 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~l~~~~~~~-~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 583 (815)
...+.++||.|.||+||+|.++ ....||||.++.+.... ..+|..|+.||.+++||||++|.|+.....+.++|+
T Consensus 630 ~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiT 709 (996)
T KOG0196|consen 630 CVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIIT 709 (996)
T ss_pred heEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEh
Confidence 4556789999999999999964 24579999998765444 468999999999999999999999999999999999
Q ss_pred EeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccC
Q 003504 584 DYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDI 663 (815)
Q Consensus 584 ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDl 663 (815)
|||++|+|+.||+++ +..+.|.+...|.++||.||.||- +.++|||||
T Consensus 710 EyMENGsLDsFLR~~-----------------------------DGqftviQLVgMLrGIAsGMkYLs---dm~YVHRDL 757 (996)
T KOG0196|consen 710 EYMENGSLDSFLRQN-----------------------------DGQFTVIQLVGMLRGIASGMKYLS---DMNYVHRDL 757 (996)
T ss_pred hhhhCCcHHHHHhhc-----------------------------CCceEeehHHHHHHHHHHHhHHHh---hcCchhhhh
Confidence 999999999999873 345888899999999999999999 899999999
Q ss_pred CCCceEEcCCCCeeecccccceecCCCC-cccccc---ccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CCCCC
Q 003504 664 KASSVYLDMNLEPRLSDFGLAKIFGNGL-DEEIAR---GSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GKKPL 738 (815)
Q Consensus 664 k~~NIll~~~~~~kl~Dfgla~~~~~~~-~~~~~~---gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~ 738 (815)
.++||||+.+..+||+|||+++.+..+. ...... -..+|.|||.+.-.+ ++.+||||||||||||+++ |.+||
T Consensus 758 AARNILVNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RK--FTsASDVWSyGIVmWEVmSyGERPY 835 (996)
T KOG0196|consen 758 AARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRK--FTSASDVWSYGIVMWEVMSYGERPY 835 (996)
T ss_pred hhhheeeccceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcc--cCchhhccccceEEEEecccCCCcc
Confidence 9999999999999999999999886554 122222 246899999998766 7999999999999999999 99999
Q ss_pred CCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhhh
Q 003504 739 GDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDIE 812 (815)
Q Consensus 739 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~ 812 (815)
.+....+. ...++.+++...|.+|+..+.+||..||++|-.+||.|.||+..|+++.
T Consensus 836 WdmSNQdV-----------------IkaIe~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklI 892 (996)
T KOG0196|consen 836 WDMSNQDV-----------------IKAIEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLI 892 (996)
T ss_pred cccchHHH-----------------HHHHHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHh
Confidence 86433221 1223456777779999999999999999999999999999999999874
No 8
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6e-46 Score=374.84 Aligned_cols=253 Identities=25% Similarity=0.412 Sum_probs=206.8
Q ss_pred cCCCCCCeecccCCeeeEEEE-cCCCcEEEEEEeecCCcc-------cHHHHHHHHHHhcCCCCCCceeeeeEEEeCCee
Q 003504 508 SNFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHGSTL-------TDQEAARELEYLGRIKHPNLVPLTGYCIAGDQR 579 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~l~~~~~~-------~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 579 (815)
+.|.+.+.+|+|+||.|-+|. ..+|+.||||++++.... ......+|+++|++|+|||||++.+++...+..
T Consensus 172 d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~ 251 (475)
T KOG0615|consen 172 DYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSS 251 (475)
T ss_pred ceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCce
Confidence 467788999999999999998 578999999999754221 223457999999999999999999999999999
Q ss_pred EEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCee
Q 003504 580 IAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPII 659 (815)
Q Consensus 580 ~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~iv 659 (815)
|+|+|||++|+|.+++-... .+....-.-++.|+..|+.||| ++||+
T Consensus 252 YmVlE~v~GGeLfd~vv~nk------------------------------~l~ed~~K~~f~Qll~avkYLH---~~GI~ 298 (475)
T KOG0615|consen 252 YMVLEYVEGGELFDKVVANK------------------------------YLREDLGKLLFKQLLTAVKYLH---SQGII 298 (475)
T ss_pred EEEEEEecCccHHHHHHhcc------------------------------ccccchhHHHHHHHHHHHHHHH---HcCcc
Confidence 99999999999999996532 2333334678999999999999 89999
Q ss_pred eccCCCCceEEcCC---CCeeecccccceecCCCCccccccccccccCCcccCCCCCCCC-CcCcchhHHHHHHHHHhCC
Q 003504 660 HRDIKASSVYLDMN---LEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPT-PKSDVYCYGVVLLELITGK 735 (815)
Q Consensus 660 HrDlk~~NIll~~~---~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~~~Dv~S~Gvvl~el~tg~ 735 (815)
||||||+|||+..+ ..+||+|||+|+..+.+....+.|||+.|.|||++.+....++ .++|+||+|||+|-+++|.
T Consensus 299 HRDiKPeNILl~~~~e~~llKItDFGlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~ 378 (475)
T KOG0615|consen 299 HRDIKPENILLSNDAEDCLLKITDFGLAKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGY 378 (475)
T ss_pred cccCCcceEEeccCCcceEEEecccchhhccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccC
Confidence 99999999999866 6799999999999998888899999999999999987764344 4899999999999999999
Q ss_pred CCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 736 KPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 736 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
+||.+...... +.+ ++.+. .-. +.+....+..++..+++.+++..||++|||+.++++
T Consensus 379 pPFS~~~~~~s---l~e---QI~~G---~y~----f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~ 436 (475)
T KOG0615|consen 379 PPFSEEYTDPS---LKE---QILKG---RYA----FGPLQWDRISEEALDLINWMLVVDPENRPSADEALN 436 (475)
T ss_pred CCcccccCCcc---HHH---HHhcC---ccc----ccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence 99987543321 111 11111 111 112235678899999999999999999999999874
No 9
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-45 Score=368.86 Aligned_cols=203 Identities=27% Similarity=0.457 Sum_probs=181.5
Q ss_pred hcCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecC--CcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEE
Q 003504 507 TSNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHG--STLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIY 583 (815)
Q Consensus 507 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 583 (815)
..+|...+.||+|+||+||+|++ .++..||||.+.+. .....+.+..|+++|+.++|||||++++++..++..++||
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM 88 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM 88 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence 35788889999999999999995 56899999999765 3344566789999999999999999999999999999999
Q ss_pred EeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccC
Q 003504 584 DYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDI 663 (815)
Q Consensus 584 ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDl 663 (815)
|||.+|+|.+||+.. ..++......++.|+|.||++|| +.+||||||
T Consensus 89 EyC~gGDLs~yi~~~------------------------------~~l~e~t~r~Fm~QLA~alq~L~---~~~IiHRDL 135 (429)
T KOG0595|consen 89 EYCNGGDLSDYIRRR------------------------------GRLPEATARHFMQQLASALQFLH---ENNIIHRDL 135 (429)
T ss_pred EeCCCCCHHHHHHHc------------------------------CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccC
Confidence 999999999999863 25677778899999999999999 899999999
Q ss_pred CCCceEEcCC------CCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCC
Q 003504 664 KASSVYLDMN------LEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKP 737 (815)
Q Consensus 664 k~~NIll~~~------~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p 737 (815)
||.|||++.. -.+||+|||+|+.+.++....+.+|++.|||||+++... |+.|+|+||.|+++|++++|+.|
T Consensus 136 KPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~~a~tlcGSplYMAPEV~~~~~--YdAKADLWSiG~Ilyq~l~g~~P 213 (429)
T KOG0595|consen 136 KPQNILLSTTARNDTSPVLKIADFGFARFLQPGSMAETLCGSPLYMAPEVIMSQQ--YDAKADLWSIGTILYQCLTGKPP 213 (429)
T ss_pred CcceEEeccCCCCCCCceEEecccchhhhCCchhHHHHhhCCccccCHHHHHhcc--ccchhhHHHHHHHHHHHHhCCCC
Confidence 9999999865 458999999999999888888899999999999998666 89999999999999999999999
Q ss_pred CCCCCCc
Q 003504 738 LGDDYPE 744 (815)
Q Consensus 738 ~~~~~~~ 744 (815)
|....+.
T Consensus 214 f~a~t~~ 220 (429)
T KOG0595|consen 214 FDAETPK 220 (429)
T ss_pred ccccCHH
Confidence 9864443
No 10
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.6e-44 Score=381.88 Aligned_cols=246 Identities=25% Similarity=0.396 Sum_probs=211.8
Q ss_pred cCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCC---cccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEE
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGS---TLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIY 583 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 583 (815)
.+|..++.||+|+|+.||+++. ..|..||+|++.+.. ....+...+||+|-++|+|||||++++||++.+..|+|.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 4688999999999999999996 889999999997642 334567889999999999999999999999999999999
Q ss_pred EeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccC
Q 003504 584 DYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDI 663 (815)
Q Consensus 584 ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDl 663 (815)
|+|++|+|.+++.. .++++......+..||+.||.||| +.+|+||||
T Consensus 98 ELC~~~sL~el~Kr------------------------------rk~ltEpEary~l~QIv~GlkYLH---~~~IiHRDL 144 (592)
T KOG0575|consen 98 ELCHRGSLMELLKR------------------------------RKPLTEPEARYFLRQIVEGLKYLH---SLGIIHRDL 144 (592)
T ss_pred EecCCccHHHHHHh------------------------------cCCCCcHHHHHHHHHHHHHHHHHH---hcCceeccc
Confidence 99999999999874 346788888999999999999999 899999999
Q ss_pred CCCceEEcCCCCeeecccccceecCCC-CccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCC
Q 003504 664 KASSVYLDMNLEPRLSDFGLAKIFGNG-LDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDY 742 (815)
Q Consensus 664 k~~NIll~~~~~~kl~Dfgla~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~ 742 (815)
|..|+++++++++||+|||+|..+..+ ....+.+|||.|+|||++.... .+..+||||+|||||-|+.|++||....
T Consensus 145 KLGNlfL~~~~~VKIgDFGLAt~le~~~Erk~TlCGTPNYIAPEVl~k~g--HsfEvDiWSlGcvmYtLL~G~PPFetk~ 222 (592)
T KOG0575|consen 145 KLGNLFLNENMNVKIGDFGLATQLEYDGERKKTLCGTPNYIAPEVLNKSG--HSFEVDIWSLGCVMYTLLVGRPPFETKT 222 (592)
T ss_pred chhheeecCcCcEEecccceeeeecCcccccceecCCCcccChhHhccCC--CCCchhhhhhhhHHHhhhhCCCCcccch
Confidence 999999999999999999999988744 6778889999999999998665 6899999999999999999999998643
Q ss_pred CccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 743 PEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 743 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
..+....+ +. .+.. .|...+.+..+|+.++++++|.+|||+++|+.
T Consensus 223 vkety~~I--------k~---~~Y~-------~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~ 268 (592)
T KOG0575|consen 223 VKETYNKI--------KL---NEYS-------MPSHLSAEAKDLIRKLLRPNPSERPSLDEVLD 268 (592)
T ss_pred HHHHHHHH--------Hh---cCcc-------cccccCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 33222111 11 1111 24456678899999999999999999999975
No 11
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-43 Score=403.38 Aligned_cols=262 Identities=28% Similarity=0.401 Sum_probs=214.0
Q ss_pred cCCCCCCeecccCCeeeEEEEcCC--C----cEEEEEEeecC-CcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeE
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFLPG--G----IHVAVKVLVHG-STLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRI 580 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~~~--~----~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 580 (815)
...+..+.||+|+||.||+|+..+ | ..||||.+.+. +..+..+|.+|..+|+.++|||||+++|+|.+....+
T Consensus 692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~ 771 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPL 771 (1025)
T ss_pred hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcE
Confidence 345567899999999999999532 3 35999999775 3455678999999999999999999999999999999
Q ss_pred EEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeee
Q 003504 581 AIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIH 660 (815)
Q Consensus 581 lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivH 660 (815)
+++|||++|+|..||++.+... .....++..+.+.+|.|||+|+.||+ ++++||
T Consensus 772 i~leyM~gGDL~sflr~~r~~~-----------------------~~~~~L~~~dLl~~a~dvA~G~~YLe---~~~fvH 825 (1025)
T KOG1095|consen 772 ILLEYMEGGDLLSFLRESRPAP-----------------------FQPSNLSMRDLLAFALDVAKGMNYLE---SKHFVH 825 (1025)
T ss_pred EEehhcccCcHHHHHHhccccc-----------------------CCCCCCCHHHHHHHHHHHhhhhHHHH---hCCCcC
Confidence 9999999999999998753221 11446888999999999999999999 899999
Q ss_pred ccCCCCceEEcCCCCeeecccccceecCCCCcc---ccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CCC
Q 003504 661 RDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDE---EIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GKK 736 (815)
Q Consensus 661 rDlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~ 736 (815)
|||.++|+|+++...+||+|||+|+..-...-. ....-...|||||.+.... ++.|+|||||||++||++| |..
T Consensus 826 RDLAaRNCLL~~~r~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~i--FtskSDvWsFGVllWEifslG~~ 903 (1025)
T KOG1095|consen 826 RDLAARNCLLDERRVVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGI--FTSKSDVWSFGVLLWEIFSLGAT 903 (1025)
T ss_pred cchhhhheeecccCcEEEcccchhHhhhhchheeccCccccceecCCHHHHhhcc--cccccchhhhHHHHHHHHhCCCC
Confidence 999999999999999999999999954332211 1112346899999998755 8999999999999999999 999
Q ss_pred CCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhhhhc
Q 003504 737 PLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDIEST 814 (815)
Q Consensus 737 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~~~ 814 (815)
||.+....+. .. ..... . +...|..|++.+.++|..||+.+|++||+|..+++++..+.+.
T Consensus 904 PY~~~~n~~v----~~---~~~~g---------g-RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~ 964 (1025)
T KOG1095|consen 904 PYPSRSNFEV----LL---DVLEG---------G-RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNA 964 (1025)
T ss_pred CCCCcchHHH----HH---HHHhC---------C-ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhh
Confidence 9986443222 11 11111 1 4455888999999999999999999999999999999888654
No 12
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.2e-44 Score=345.65 Aligned_cols=248 Identities=25% Similarity=0.421 Sum_probs=202.8
Q ss_pred cCCCCCCeecccCCeeeEEEE-cCCCcEEEEEEeecCC--cccHHHHHHHHHHhcCCCCCCceeeeeE-EEeCCe-eEEE
Q 003504 508 SNFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHGS--TLTDQEAARELEYLGRIKHPNLVPLTGY-CIAGDQ-RIAI 582 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~-~~~~~~-~~lv 582 (815)
.+|.+.++||+|.||+|||++ ..+|..||.|.+.-+. ....++...|+.+|++|+|||||++++. +.+..+ .++|
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv 98 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV 98 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence 356778899999999999998 6789999999987432 2335678899999999999999999994 344444 7899
Q ss_pred EEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCC--eee
Q 003504 583 YDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPP--IIH 660 (815)
Q Consensus 583 ~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~--ivH 660 (815)
||||..|+|...++..+ .....++.+..++++.|+++||..+|... +. |+|
T Consensus 99 mE~c~~GDLsqmIk~~K--------------------------~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~-~r~~VmH 151 (375)
T KOG0591|consen 99 MELCDAGDLSQMIKHFK--------------------------KQKRLIPEKTVWKYFVQLCRALYHCHSKI-PRGTVMH 151 (375)
T ss_pred HHhhcccCHHHHHHHHH--------------------------hccccCchHHHHHHHHHHHHHHHHHhccc-cccceee
Confidence 99999999999997532 23567788889999999999999999422 44 889
Q ss_pred ccCCCCceEEcCCCCeeecccccceecCCCC-ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCC
Q 003504 661 RDIKASSVYLDMNLEPRLSDFGLAKIFGNGL-DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLG 739 (815)
Q Consensus 661 rDlk~~NIll~~~~~~kl~Dfgla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~ 739 (815)
|||||.||+++.+|.+|++|||+++.+.... .....+|||.||+||.+.... |+.||||||+||++|||+.-+.||.
T Consensus 152 RDIKPaNIFl~~~gvvKLGDfGL~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~--Y~~kSDiWslGCllyEMcaL~~PF~ 229 (375)
T KOG0591|consen 152 RDIKPANIFLTANGVVKLGDFGLGRFLSSKTTFAHSLVGTPYYMSPERIHESG--YNFKSDIWSLGCLLYEMCALQSPFY 229 (375)
T ss_pred ccCcchheEEcCCCceeeccchhHhHhcchhHHHHhhcCCCcccCHHHHhcCC--CCcchhHHHHHHHHHHHHhcCCCcc
Confidence 9999999999999999999999999987654 334567999999999999887 8999999999999999999999998
Q ss_pred CCCCccccccHHHHHHHHHhcCCCCccccccccCCCC-HHHHHHHHHHHhhccccCCCCCCCH
Q 003504 740 DDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGP-EKQMEEALKIGYLCTADLPLKRPSM 801 (815)
Q Consensus 740 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~Cl~~dP~~RPs~ 801 (815)
++ ++.+..+.+-.. .+. ..| +..+..+..++..|+..||+.||+.
T Consensus 230 g~-------n~~~L~~KI~qg---------d~~-~~p~~~YS~~l~~li~~ci~vd~~~RP~t 275 (375)
T KOG0591|consen 230 GD-------NLLSLCKKIEQG---------DYP-PLPDEHYSTDLRELINMCIAVDPEQRPDT 275 (375)
T ss_pred cc-------cHHHHHHHHHcC---------CCC-CCcHHHhhhHHHHHHHHHccCCcccCCCc
Confidence 63 344433333221 111 123 6678899999999999999999983
No 13
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=9.3e-43 Score=363.99 Aligned_cols=263 Identities=26% Similarity=0.370 Sum_probs=213.6
Q ss_pred HhcCCCCCCeecccCCeeeEEEEcCCCcEEEEEEeecCCcccH-HHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEE
Q 003504 506 ATSNFDRGTLLAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTD-QEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYD 584 (815)
Q Consensus 506 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~-~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 584 (815)
+.+...+.+.||+|-||+|..+....+..||||.++..+..+. .+|.+|+++|.+++|||||+++|+|..+++.++|+|
T Consensus 536 PRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~E 615 (807)
T KOG1094|consen 536 PRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITE 615 (807)
T ss_pred chhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHH
Confidence 3345667899999999999999999899999999998766655 799999999999999999999999999999999999
Q ss_pred eCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCC
Q 003504 585 YMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIK 664 (815)
Q Consensus 585 y~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk 664 (815)
||++|+|.+|+.....+ ..+-..-.+|+.|||.||+||. +.++||||+.
T Consensus 616 YmEnGDLnqFl~aheap----------------------------t~~t~~~vsi~tqiasgmaYLe---s~nfVHrd~a 664 (807)
T KOG1094|consen 616 YMENGDLNQFLSAHELP----------------------------TAETAPGVSICTQIASGMAYLE---SLNFVHRDLA 664 (807)
T ss_pred HHhcCcHHHHHHhccCc----------------------------ccccchhHHHHHHHHHHHHHHH---hhchhhcccc
Confidence 99999999999764211 1233445679999999999999 8999999999
Q ss_pred CCceEEcCCCCeeecccccceecCCCCc---cccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh--CCCCCC
Q 003504 665 ASSVYLDMNLEPRLSDFGLAKIFGNGLD---EEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT--GKKPLG 739 (815)
Q Consensus 665 ~~NIll~~~~~~kl~Dfgla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t--g~~p~~ 739 (815)
++|||+|.++++||+|||.++.+-.+.. ....+-...|||||.+...+ ++.+||||+|||.+||+++ ...||.
T Consensus 665 ~rNcLv~~e~~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawEsillgk--FttaSDvWafgvTlwE~~~~C~e~Py~ 742 (807)
T KOG1094|consen 665 TRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESILLGK--FTTASDVWAFGVTLWEVFMLCREQPYS 742 (807)
T ss_pred ccceeecCcccEEecCcccccccccCCceeeecceeeeeeehhHHHHHhcc--ccchhhhhhhHHHHHHHHHHHhhCchh
Confidence 9999999999999999999996644432 12233467999999888776 8999999999999999988 788987
Q ss_pred CCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhh
Q 003504 740 DDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDI 811 (815)
Q Consensus 740 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 811 (815)
....+ ++++-....++... +......|.-|+..+.++|.+||+.|-++||+++++...|.+.
T Consensus 743 ~lt~e----~vven~~~~~~~~~------~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 743 QLTDE----QVVENAGEFFRDQG------RQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred hhhHH----HHHHhhhhhcCCCC------cceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 64433 23332232332221 1112233667888999999999999999999999999988764
No 14
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=9.4e-43 Score=367.61 Aligned_cols=263 Identities=25% Similarity=0.374 Sum_probs=211.5
Q ss_pred HHHHHhcCCCCCCeecccCCeeeEEEEcCCCcEEEEEEeecCCcc--cHHHHHHHHHHhcCCCCCCceeeeeEEEeCCee
Q 003504 502 DLLSATSNFDRGTLLAEGKFGPVYRGFLPGGIHVAVKVLVHGSTL--TDQEAARELEYLGRIKHPNLVPLTGYCIAGDQR 579 (815)
Q Consensus 502 ~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 579 (815)
+..+..+.+.+++.||+|+||+||+|.|.+ .||||++...... ..+.|++|+..+++-+|.||+=+.|||..+..
T Consensus 386 ~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~- 462 (678)
T KOG0193|consen 386 EWEIPPEEVLLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL- 462 (678)
T ss_pred ccccCHHHhhccceeccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-
Confidence 334444556668899999999999999974 4999999765443 34689999999999999999999999998766
Q ss_pred EEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCee
Q 003504 580 IAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPII 659 (815)
Q Consensus 580 ~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~iv 659 (815)
.+|+.+|++-+|+.+||.. ...++....+.||.|||+||.||| .++||
T Consensus 463 AIiTqwCeGsSLY~hlHv~-----------------------------etkfdm~~~idIAqQiaqGM~YLH---AK~II 510 (678)
T KOG0193|consen 463 AIITQWCEGSSLYTHLHVQ-----------------------------ETKFDMNTTIDIAQQIAQGMDYLH---AKNII 510 (678)
T ss_pred eeeehhccCchhhhhccch-----------------------------hhhhhHHHHHHHHHHHHHhhhhhh---hhhhh
Confidence 9999999999999999963 345778888999999999999999 99999
Q ss_pred eccCCCCceEEcCCCCeeecccccceecC---CCCccccccccccccCCcccCCCC-CCCCCcCcchhHHHHHHHHHhCC
Q 003504 660 HRDIKASSVYLDMNLEPRLSDFGLAKIFG---NGLDEEIARGSPGYIPPEFAQPDS-DFPTPKSDVYCYGVVLLELITGK 735 (815)
Q Consensus 660 HrDlk~~NIll~~~~~~kl~Dfgla~~~~---~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~~~Dv~S~Gvvl~el~tg~ 735 (815)
|||||+.||++.+++++||+|||++..-. .+.......|..-|||||++.... ..|++++||||||+|+|||++|.
T Consensus 511 HrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~ 590 (678)
T KOG0193|consen 511 HRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGE 590 (678)
T ss_pred hhhccccceEEccCCcEEEecccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCc
Confidence 99999999999999999999999986432 222344455888999999987543 44799999999999999999999
Q ss_pred CCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhhh
Q 003504 736 KPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDIE 812 (815)
Q Consensus 736 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~ 812 (815)
.||.....+.. . +.. .+....|+... ...++++++.+|+..||..++++||.+.+|+..|+++.
T Consensus 591 lPysi~~~dqI----i------fmV--GrG~l~pd~s~-~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~ 654 (678)
T KOG0193|consen 591 LPYSIQNRDQI----I------FMV--GRGYLMPDLSK-IRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELL 654 (678)
T ss_pred CCcCCCChhhe----E------EEe--cccccCccchh-hhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhh
Confidence 99985332211 0 111 11122222211 14567889999999999999999999999999888764
No 15
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-42 Score=346.65 Aligned_cols=241 Identities=25% Similarity=0.315 Sum_probs=200.3
Q ss_pred hcCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCccc---HHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEE
Q 003504 507 TSNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGSTLT---DQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAI 582 (815)
Q Consensus 507 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~---~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv 582 (815)
.++|++.++||+|+||+||.++. ++++.+|+|++++..... .+....|..+|.+++||.||+++..+++.+..|+|
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence 45799999999999999999995 568899999998765443 35678899999999999999999999999999999
Q ss_pred EEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecc
Q 003504 583 YDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRD 662 (815)
Q Consensus 583 ~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrD 662 (815)
+||+.||.|..+|+.. ..++.....-.+..|+.||.||| +.+|||||
T Consensus 104 ld~~~GGeLf~hL~~e------------------------------g~F~E~~arfYlaEi~lAL~~LH---~~gIiyRD 150 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQRE------------------------------GRFSEDRARFYLAEIVLALGYLH---SKGIIYRD 150 (357)
T ss_pred EeccCCccHHHHHHhc------------------------------CCcchhHHHHHHHHHHHHHHHHH---hCCeeecc
Confidence 9999999999999752 23444444557778999999999 89999999
Q ss_pred CCCCceEEcCCCCeeecccccceecC-CCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCC
Q 003504 663 IKASSVYLDMNLEPRLSDFGLAKIFG-NGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDD 741 (815)
Q Consensus 663 lk~~NIll~~~~~~kl~Dfgla~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~ 741 (815)
|||+|||+|++|+++|+|||+++..- .+....+.+||+.|||||++.... ++..+|+||+||++|||++|.+||...
T Consensus 151 lKPENILLd~~GHi~LtDFgL~k~~~~~~~~t~tfcGT~eYmAPEil~~~g--y~~~vDWWsLGillYeML~G~pPF~~~ 228 (357)
T KOG0598|consen 151 LKPENILLDEQGHIKLTDFGLCKEDLKDGDATRTFCGTPEYMAPEILLGKG--YDKAVDWWSLGILLYEMLTGKPPFYAE 228 (357)
T ss_pred CCHHHeeecCCCcEEEeccccchhcccCCCccccccCCccccChHHHhcCC--CCcccchHhHHHHHHHHhhCCCCCcCc
Confidence 99999999999999999999999544 445666789999999999999886 799999999999999999999999853
Q ss_pred CCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCC
Q 003504 742 YPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRP 799 (815)
Q Consensus 742 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP 799 (815)
. ...+.+.+.... ....+.-...+..+++.+.+..||++|.
T Consensus 229 ~-------~~~~~~~I~~~k----------~~~~p~~ls~~ardll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 229 D-------VKKMYDKILKGK----------LPLPPGYLSEEARDLLKKLLKRDPRQRL 269 (357)
T ss_pred c-------HHHHHHHHhcCc----------CCCCCccCCHHHHHHHHHHhccCHHHhc
Confidence 3 333334433322 1111333556788999999999999996
No 16
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-42 Score=372.04 Aligned_cols=258 Identities=26% Similarity=0.382 Sum_probs=209.7
Q ss_pred HhcCCCCCCeecccCCeeeEEEEcCC--C---cEEEEEEeecCC---cccHHHHHHHHHHhcCCCCCCceeeeeEEEeCC
Q 003504 506 ATSNFDRGTLLAEGKFGPVYRGFLPG--G---IHVAVKVLVHGS---TLTDQEAARELEYLGRIKHPNLVPLTGYCIAGD 577 (815)
Q Consensus 506 ~~~~~~~~~~ig~G~~g~Vy~~~~~~--~---~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~ 577 (815)
.-++....+.||+|+||.||+|.+.. + ..||||...... .....+|.+|+++|++++|||||+++|++....
T Consensus 155 ~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~ 234 (474)
T KOG0194|consen 155 SHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEE 234 (474)
T ss_pred eccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCC
Confidence 34455667999999999999999532 2 238999987532 334568999999999999999999999999999
Q ss_pred eeEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCC
Q 003504 578 QRIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPP 657 (815)
Q Consensus 578 ~~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ 657 (815)
+.++|||+|+||+|.++|++. ...++..++++++.++|.||+||| +.+
T Consensus 235 Pl~ivmEl~~gGsL~~~L~k~-----------------------------~~~v~~~ek~~~~~~AA~Gl~YLh---~k~ 282 (474)
T KOG0194|consen 235 PLMLVMELCNGGSLDDYLKKN-----------------------------KKSLPTLEKLRFCYDAARGLEYLH---SKN 282 (474)
T ss_pred ccEEEEEecCCCcHHHHHHhC-----------------------------CCCCCHHHHHHHHHHHHhHHHHHH---HCC
Confidence 999999999999999999863 235889999999999999999999 899
Q ss_pred eeeccCCCCceEEcCCCCeeecccccceecCCCCccc-cccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CC
Q 003504 658 IIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEE-IARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GK 735 (815)
Q Consensus 658 ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~ 735 (815)
+|||||.++|+|++.++.+||+|||+++.-....... ...-...|+|||.+.... +++++|||||||++||+++ |.
T Consensus 283 ~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~~~~~~~~klPirWLAPEtl~~~~--~s~kTDV~sfGV~~~Eif~~g~ 360 (474)
T KOG0194|consen 283 CIHRDIAARNCLYSKKGVVKISDFGLSRAGSQYVMKKFLKKLPIRWLAPETLNTGI--FSFKTDVWSFGVLLWEIFENGA 360 (474)
T ss_pred CcchhHhHHHheecCCCeEEeCccccccCCcceeeccccccCcceecChhhhccCc--cccccchhheeeeEEeeeccCC
Confidence 9999999999999999999999999988543111111 122457899999998775 8999999999999999999 89
Q ss_pred CCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhhhh
Q 003504 736 KPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDIES 813 (815)
Q Consensus 736 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~~ 813 (815)
.||.+.... .+..++ . ...++...+...+.++..++..||..+|++||+|.++.+.++.+..
T Consensus 361 ~Py~g~~~~----~v~~kI---~---------~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~ 422 (474)
T KOG0194|consen 361 EPYPGMKNY----EVKAKI---V---------KNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEK 422 (474)
T ss_pred CCCCCCCHH----HHHHHH---H---------hcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHh
Confidence 999764332 122211 1 1223333455677889999999999999999999999999998754
No 17
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=5.2e-42 Score=332.62 Aligned_cols=265 Identities=22% Similarity=0.271 Sum_probs=205.0
Q ss_pred cCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCC--cccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEE
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGS--TLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYD 584 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 584 (815)
+.|+....+|+|+||.|||++. .+|+.||||++.... +.-.+-..||+++|++++|||+|.++.+|......++|+|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 3577778999999999999996 569999999997632 2334567899999999999999999999999999999999
Q ss_pred eCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCC
Q 003504 585 YMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIK 664 (815)
Q Consensus 585 y~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk 664 (815)
||+. ++.+-|...+ ...+.....+++.|+++|+.|+| +.++||||||
T Consensus 82 ~~dh-TvL~eLe~~p-----------------------------~G~~~~~vk~~l~Q~l~ai~~cH---k~n~IHRDIK 128 (396)
T KOG0593|consen 82 YCDH-TVLHELERYP-----------------------------NGVPSELVKKYLYQLLKAIHFCH---KNNCIHRDIK 128 (396)
T ss_pred ecch-HHHHHHHhcc-----------------------------CCCCHHHHHHHHHHHHHHhhhhh---hcCeecccCC
Confidence 9998 4444454432 23455667899999999999999 8999999999
Q ss_pred CCceEEcCCCCeeecccccceecC-CCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCC
Q 003504 665 ASSVYLDMNLEPRLSDFGLAKIFG-NGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYP 743 (815)
Q Consensus 665 ~~NIll~~~~~~kl~Dfgla~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~ 743 (815)
|+||||+.+|.+||||||+|+.+. ++...+..+.|.+|+|||.+.+... |+..+||||.||++.||++|.+-|.+...
T Consensus 129 PENILit~~gvvKLCDFGFAR~L~~pgd~YTDYVATRWYRaPELLvGDtq-YG~pVDiWAiGCv~aEl~~G~pL~PG~SD 207 (396)
T KOG0593|consen 129 PENILITQNGVVKLCDFGFARTLSAPGDNYTDYVATRWYRAPELLVGDTQ-YGKPVDIWAIGCVFAELLTGEPLWPGRSD 207 (396)
T ss_pred hhheEEecCCcEEeccchhhHhhcCCcchhhhhhhhhhccChhhhcccCc-CCCcccchhhhHHHHHHhcCCcCCCCcch
Confidence 999999999999999999999987 6667777889999999999998765 78899999999999999999998876332
Q ss_pred ccccccHHHH-------HHHHHhcCC-CCccccccccCCC-----CHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 744 EEKEGNLVSW-------VRGLVRNNK-GSRAIDPKIRDTG-----PEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 744 ~~~~~~~~~~-------~~~~~~~~~-~~~~~~~~~~~~~-----~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
-+.---+..- -..++..+. ...+.-|...... .......+++++..|++.||.+|++-+|++.
T Consensus 208 iDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 208 IDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred HHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 1110011111 112222222 1222222222111 2234567899999999999999999999864
No 18
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=6.8e-43 Score=364.91 Aligned_cols=363 Identities=29% Similarity=0.357 Sum_probs=330.1
Q ss_pred CCCCcceeeeEecCCC--------------CeEEEEecCCCCCccCCCcccccCCCCCCEEECcCCCCCCCCcccCCCCC
Q 003504 12 SASFCSWRGVVCDSNK--------------QHVTDFLASNSGLSGSVPDTTIGKLSKLQSLDLSENNITALPSDLWSLGS 77 (815)
Q Consensus 12 ~~~~c~w~gv~C~~~~--------------~~~~~l~~~~~~~~g~~~~~~~~~l~~L~~L~Ls~n~l~~lp~~~~~l~~ 77 (815)
.++.|.-.-..|++.+ ..+.+|++++|++.. +....|.++++|++++|.+|.++.||.......+
T Consensus 48 a~c~c~~~lldcs~~~lea~~~~~l~g~lp~~t~~LdlsnNkl~~-id~~~f~nl~nLq~v~l~~N~Lt~IP~f~~~sgh 126 (873)
T KOG4194|consen 48 ATCPCNTRLLDCSDRELEAIDKSRLKGFLPSQTQTLDLSNNKLSH-IDFEFFYNLPNLQEVNLNKNELTRIPRFGHESGH 126 (873)
T ss_pred CcCCCCceeeecCccccccccccccCCcCccceeeeecccccccc-CcHHHHhcCCcceeeeeccchhhhcccccccccc
Confidence 3455666667776532 135679999999984 5556799999999999999999999987777889
Q ss_pred CCEEEccCCcCCccCCccccCCCCCcEEEccCCcCCCCChhhhcCCcCCCEEEcCCCcccccCCcccccccccceeeccC
Q 003504 78 LKSLNLSYNRISGSLPSNIGNFGLLEVFDLSNNNFSGEIPAAISSLVSLRVLKLDGNMFQWSIPPGLLNCQSLVTVDLSM 157 (815)
Q Consensus 78 L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 157 (815)
|+.|+|.+|.|+.+..+.++.++.|+.||||.|.|+.+.-.+|..-.++++|+|++|+|+....+.|..+.+|.+|.|+.
T Consensus 127 l~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsr 206 (873)
T KOG4194|consen 127 LEKLDLRHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSR 206 (873)
T ss_pred eeEEeeeccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeeccc
Confidence 99999999999999999999999999999999999988888999999999999999999998899999999999999999
Q ss_pred CcCCCCCCchhhccCCCCCEEEcCCCcccCC-CCCCCCCCCCCeEeccCCcCCCcchhhh--hcccceeeeccccccCcc
Q 003504 158 NQLNGSLPDGFGAAFPKLKSLNLAGNEIKGR-DTHFAGLKSITNLNISGNLFQGSVMGVF--LESLEVIDLRSNQFQGHI 234 (815)
Q Consensus 158 N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~-~~~~~~l~~L~~L~Ls~N~l~~~~~~~~--l~~L~~L~L~~N~l~~~~ 234 (815)
|+|+ .+|...|..+++|+.|+|..|+|... ...|.+|++|+.|.|..|.|..+..++| +.+++.|+|+.|+++.
T Consensus 207 Nrit-tLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~-- 283 (873)
T KOG4194|consen 207 NRIT-TLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQA-- 283 (873)
T ss_pred Cccc-ccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhh--
Confidence 9999 99999999999999999999999987 4679999999999999999999999999 9999999999999864
Q ss_pred cccccccccCCccceEEEcCCCccCcchhhccccCCCCCEEEecCCcCcCCCccccccccCCCeEecCCCcCcCCCchhh
Q 003504 235 SQVQFNSSYNWSRLVYVDLSENQLSGEIFHNFSQAQNLKHLSLAYNRFTRQEFPQIGTLLGLEHLNLSRTSLIGDIPSEI 314 (815)
Q Consensus 235 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 314 (815)
+.-..+++++.|+.|+||.|.|..+.++.|...++|++|+|++|+|+.+++..|..+..|+.|+|++|.+...-...|
T Consensus 284 --vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af 361 (873)
T KOG4194|consen 284 --VNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAF 361 (873)
T ss_pred --hhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHH
Confidence 444567789999999999999999999999999999999999999999999999999999999999999987777789
Q ss_pred hcCCCCCEEeCCCCcCCCCCCcc-----CCCCccEEEccCCcCcccCChHHhhcCCCCceeeccCCCCcccC
Q 003504 315 LQLSSLHTLDLSMNHLTGQIPTV-----SAKNLGIIDMSHNNLSGEIPASLLEKLPQMERFNFSYNNLTLCA 381 (815)
Q Consensus 315 ~~l~~L~~L~ls~N~l~~~~~~~-----~~~~L~~L~ls~N~l~~~~p~~~~~~l~~l~~l~l~~N~l~~~~ 381 (815)
..+++|++|||++|.|+..+.+. .++.|+.|++.+|+|. .||...|..++.|+.|||.+|.+....
T Consensus 362 ~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk-~I~krAfsgl~~LE~LdL~~NaiaSIq 432 (873)
T KOG4194|consen 362 VGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLK-SIPKRAFSGLEALEHLDLGDNAIASIQ 432 (873)
T ss_pred HHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceee-ecchhhhccCcccceecCCCCcceeec
Confidence 99999999999999999866543 6789999999999998 899999999999999999999986443
No 19
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8.6e-42 Score=353.31 Aligned_cols=264 Identities=24% Similarity=0.327 Sum_probs=208.2
Q ss_pred cCCCCCCeecccCCeeeEEEE-cCCCcEEEEEEeecCC--cccHHHHHHHHHHhcCCCCCCceeeeeEEEeC--CeeEEE
Q 003504 508 SNFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHGS--TLTDQEAARELEYLGRIKHPNLVPLTGYCIAG--DQRIAI 582 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lv 582 (815)
+.|+..+.||+|.||.||+|+ ..+|+.||+|+++... .....-..|||.||++|+||||+++.+...+. ...|+|
T Consensus 117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlV 196 (560)
T KOG0600|consen 117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLV 196 (560)
T ss_pred HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEE
Confidence 456677899999999999999 6789999999997643 34456678999999999999999999999886 689999
Q ss_pred EEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecc
Q 003504 583 YDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRD 662 (815)
Q Consensus 583 ~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrD 662 (815)
+|||+. +|.-++.. .+..++..+...++.|++.||+|+| .++|+|||
T Consensus 197 FeYMdh-DL~GLl~~-----------------------------p~vkft~~qIKc~mkQLl~Gl~~cH---~~gvlHRD 243 (560)
T KOG0600|consen 197 FEYMDH-DLSGLLSS-----------------------------PGVKFTEPQIKCYMKQLLEGLEYCH---SRGVLHRD 243 (560)
T ss_pred Eecccc-hhhhhhcC-----------------------------CCcccChHHHHHHHHHHHHHHHHHh---hcCeeecc
Confidence 999998 88888864 2456788899999999999999999 89999999
Q ss_pred CCCCceEEcCCCCeeecccccceecCCCC--ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCC
Q 003504 663 IKASSVYLDMNLEPRLSDFGLAKIFGNGL--DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGD 740 (815)
Q Consensus 663 lk~~NIll~~~~~~kl~Dfgla~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~ 740 (815)
||.+|||||.+|.+||+|||+|+++.... ..+..+-|.+|+|||++.+... |+.+.|+||.||||.||++|++.|.+
T Consensus 244 IK~SNiLidn~G~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRpPELLLG~t~-Yg~aVDlWS~GCIl~El~~gkPI~~G 322 (560)
T KOG0600|consen 244 IKGSNILIDNNGVLKIADFGLARFYTPSGSAPYTSRVVTLWYRPPELLLGATS-YGTAVDLWSVGCILAELFLGKPILQG 322 (560)
T ss_pred ccccceEEcCCCCEEeccccceeeccCCCCcccccceEEeeccChHHhcCCcc-cccceeehhhhHHHHHHHcCCCCcCC
Confidence 99999999999999999999999876543 4556678999999999998876 79999999999999999999999987
Q ss_pred CCCccccccHHHHHHHHHhcCCC------Ccccccc------ccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 741 DYPEEKEGNLVSWVRGLVRNNKG------SRAIDPK------IRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 741 ~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~------~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
...-+....+.+.+..-...-|. ...+.+. ++.. ....+...++|+..++..||.+|.|+.++++
T Consensus 323 ~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~-~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 323 RTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRET-FKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred ccHHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHHHH-hccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 54332222333222110001011 0111111 1000 1223467889999999999999999999875
No 20
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.6e-41 Score=340.74 Aligned_cols=261 Identities=20% Similarity=0.312 Sum_probs=207.7
Q ss_pred hcCCCCCCeecccCCeeeEEEE-cCCCcEEEEEEeecCCccc-HHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEE
Q 003504 507 TSNFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHGSTLT-DQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYD 584 (815)
Q Consensus 507 ~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~l~~~~~~~-~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 584 (815)
..+|+..+.||.|..++||+|. .+.+..||||++.-+.... .+.+.+|+..|..++||||++++..|..+...|+||.
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmp 104 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMP 104 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeeh
Confidence 3578889999999999999999 6778999999997654444 4789999999999999999999999999999999999
Q ss_pred eCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCC
Q 003504 585 YMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIK 664 (815)
Q Consensus 585 y~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk 664 (815)
||.+||+.+.+...- ...++......|.+++++||.||| .+|.||||||
T Consensus 105 fMa~GS~ldIik~~~----------------------------~~Gl~E~~Ia~iLre~LkaL~YLH---~~G~IHRdvK 153 (516)
T KOG0582|consen 105 FMAGGSLLDIIKTYY----------------------------PDGLEEASIATILREVLKALDYLH---QNGHIHRDVK 153 (516)
T ss_pred hhcCCcHHHHHHHHc----------------------------cccccHHHHHHHHHHHHHHHHHHH---hcCceecccc
Confidence 999999999997531 223677788899999999999999 8999999999
Q ss_pred CCceEEcCCCCeeecccccceecCC-CCc----cccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCC
Q 003504 665 ASSVYLDMNLEPRLSDFGLAKIFGN-GLD----EEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLG 739 (815)
Q Consensus 665 ~~NIll~~~~~~kl~Dfgla~~~~~-~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~ 739 (815)
+.||||+.+|.+||+|||.+-.+.. +.. .....||+.|||||+++..-..|+.|+||||||+...|+.+|..||.
T Consensus 154 AgnILi~~dG~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~ 233 (516)
T KOG0582|consen 154 AGNILIDSDGTVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFS 233 (516)
T ss_pred cccEEEcCCCcEEEcCceeeeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcc
Confidence 9999999999999999998865532 221 14557999999999955555458999999999999999999999998
Q ss_pred CCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 740 DDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 740 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
...+- +....-+... ........+..+........+.+++..|+..||.+|||++++++
T Consensus 234 k~pPm-------kvLl~tLqn~-pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 234 KYPPM-------KVLLLTLQND-PPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred cCChH-------HHHHHHhcCC-CCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 53221 1111111111 11111112222223345568899999999999999999999975
No 21
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-41 Score=346.85 Aligned_cols=253 Identities=29% Similarity=0.449 Sum_probs=202.8
Q ss_pred cCCCCCCeecccCCeeeEEEEcC-CCcEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCC--eeEEEEE
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFLP-GGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGD--QRIAIYD 584 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~--~~~lv~e 584 (815)
.++..++.||+|+||.||++... +|...|||..........+.+.+|+.+|.+++|||||+++|.....+ .++++||
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE 96 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME 96 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence 45667899999999999999964 48999999986543233567899999999999999999999865555 5889999
Q ss_pred eCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCC
Q 003504 585 YMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIK 664 (815)
Q Consensus 585 y~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk 664 (815)
|+++|+|.+++... .+ .++.......+.||++||+||| +++|||||||
T Consensus 97 y~~~GsL~~~~~~~----------------------------g~-~l~E~~v~~ytr~iL~GL~ylH---s~g~vH~DiK 144 (313)
T KOG0198|consen 97 YAPGGSLSDLIKRY----------------------------GG-KLPEPLVRRYTRQILEGLAYLH---SKGIVHCDIK 144 (313)
T ss_pred ccCCCcHHHHHHHc----------------------------CC-CCCHHHHHHHHHHHHHHHHHHH---hCCEeccCcc
Confidence 99999999999753 12 5788889999999999999999 8999999999
Q ss_pred CCceEEcC-CCCeeecccccceecCC----CCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCC
Q 003504 665 ASSVYLDM-NLEPRLSDFGLAKIFGN----GLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLG 739 (815)
Q Consensus 665 ~~NIll~~-~~~~kl~Dfgla~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~ 739 (815)
|+|||++. ++.+||+|||+++.... ........||+.|||||++..... ...++||||+||++.||+||+.||.
T Consensus 145 ~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~-~~~~sDiWSlGCtVvEM~Tg~~PW~ 223 (313)
T KOG0198|consen 145 PANILLDPSNGDVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEV-ARRESDIWSLGCTVVEMLTGKPPWS 223 (313)
T ss_pred cceEEEeCCCCeEEeccCccccccccccccccccccccCCccccCchhhcCCCc-CCccchhhhcCCEEEeccCCCCcch
Confidence 99999999 79999999999987763 122345679999999999985321 3459999999999999999999997
Q ss_pred CCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 003504 740 DDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLL 808 (815)
Q Consensus 740 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L 808 (815)
.. .....++-...... ..| ..|...+.+..+++.+|++.||++||||+++++.-
T Consensus 224 ~~------~~~~~~~~~ig~~~-----~~P----~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hp 277 (313)
T KOG0198|consen 224 EF------FEEAEALLLIGRED-----SLP----EIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHP 277 (313)
T ss_pred hh------cchHHHHHHHhccC-----CCC----CCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhCh
Confidence 52 11122222222111 112 23555778899999999999999999999998754
No 22
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-42 Score=356.36 Aligned_cols=250 Identities=25% Similarity=0.378 Sum_probs=209.2
Q ss_pred cccCHHHHHHHhcCCCCCCeecccCCeeeEEEEcCCCcEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCceeeeeEEEe
Q 003504 496 LNITFADLLSATSNFDRGTLLAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIA 575 (815)
Q Consensus 496 ~~~~~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~ 575 (815)
..+.|+++. ..+.+|.|+-|.||+|+++ +..||||+++.- -+.+|+-|++|+||||+.|.|+|..
T Consensus 119 WeiPFe~Is-------ELeWlGSGaQGAVF~Grl~-netVAVKKV~el-------kETdIKHLRkLkH~NII~FkGVCtq 183 (904)
T KOG4721|consen 119 WEIPFEEIS-------ELEWLGSGAQGAVFLGRLH-NETVAVKKVREL-------KETDIKHLRKLKHPNIITFKGVCTQ 183 (904)
T ss_pred ccCCHHHhh-------hhhhhccCcccceeeeecc-CceehhHHHhhh-------hhhhHHHHHhccCcceeeEeeeecC
Confidence 345555543 3689999999999999997 668999987441 2357888999999999999999999
Q ss_pred CCeeEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCC
Q 003504 576 GDQRIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCS 655 (815)
Q Consensus 576 ~~~~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~ 655 (815)
..-+++|||||+.|-|.+.|+. +.++.-.....|..+||.||.||| .
T Consensus 184 sPcyCIiMEfCa~GqL~~VLka------------------------------~~~itp~llv~Wsk~IA~GM~YLH---~ 230 (904)
T KOG4721|consen 184 SPCYCIIMEFCAQGQLYEVLKA------------------------------GRPITPSLLVDWSKGIAGGMNYLH---L 230 (904)
T ss_pred CceeEEeeeccccccHHHHHhc------------------------------cCccCHHHHHHHHHHhhhhhHHHH---H
Confidence 9999999999999999999976 345666677889999999999999 8
Q ss_pred CCeeeccCCCCceEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCC
Q 003504 656 PPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735 (815)
Q Consensus 656 ~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~ 735 (815)
+.|||||||+-||||..+..+||+|||.++....-...-.++||..|||||++.... +++|+||||||||||||+||.
T Consensus 231 hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~STkMSFaGTVaWMAPEvIrneP--csEKVDIwSfGVVLWEmLT~E 308 (904)
T KOG4721|consen 231 HKIIHRDLKSPNILISYDDVVKISDFGTSKELSDKSTKMSFAGTVAWMAPEVIRNEP--CSEKVDIWSFGVVLWEMLTGE 308 (904)
T ss_pred hhHhhhccCCCceEeeccceEEeccccchHhhhhhhhhhhhhhhHhhhCHHHhhcCC--cccccceehhHHHHHHHHhcC
Confidence 999999999999999999999999999999887665666778999999999999888 899999999999999999999
Q ss_pred CCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhh
Q 003504 736 KPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDI 811 (815)
Q Consensus 736 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 811 (815)
-||.+-..... ...+=...+....|..|++-+.-|++.||+..|..||+|+|++..|+-.
T Consensus 309 iPYkdVdssAI----------------IwGVGsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa 368 (904)
T KOG4721|consen 309 IPYKDVDSSAI----------------IWGVGSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIA 368 (904)
T ss_pred CCccccchhee----------------EEeccCCcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhc
Confidence 99976322111 0011112233345788889999999999999999999999999998643
No 23
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=1.9e-40 Score=350.27 Aligned_cols=250 Identities=20% Similarity=0.246 Sum_probs=201.5
Q ss_pred CCeecccCCeeeEEEEcCCCcEEEEEEeecCCccc---HHHHHHHHHHhcCCCCCCceeeeeEEEe----CCeeEEEEEe
Q 003504 513 GTLLAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLT---DQEAARELEYLGRIKHPNLVPLTGYCIA----GDQRIAIYDY 585 (815)
Q Consensus 513 ~~~ig~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~---~~~~~~E~~~l~~l~H~niv~l~g~~~~----~~~~~lv~ey 585 (815)
...||+|++|.||+|.. +|+.||||.++...... .+.+.+|+.++.+++||||++++|++.+ ....++||||
T Consensus 25 ~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey 103 (283)
T PHA02988 25 SVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY 103 (283)
T ss_pred CeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence 46899999999999998 58899999997643333 3567899999999999999999999977 3467899999
Q ss_pred CCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCC
Q 003504 586 MENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKA 665 (815)
Q Consensus 586 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~ 665 (815)
+++|+|.++++. ...++|..+.+++.|++.||+|||. ..+++||||||
T Consensus 104 ~~~g~L~~~l~~------------------------------~~~~~~~~~~~i~~~i~~~l~~lH~--~~~~~Hrdlkp 151 (283)
T PHA02988 104 CTRGYLREVLDK------------------------------EKDLSFKTKLDMAIDCCKGLYNLYK--YTNKPYKNLTS 151 (283)
T ss_pred CCCCcHHHHHhh------------------------------CCCCChhHHHHHHHHHHHHHHHHHh--cCCCCCCcCCh
Confidence 999999999975 2357888999999999999999993 24788999999
Q ss_pred CceEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCcc
Q 003504 666 SSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEE 745 (815)
Q Consensus 666 ~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~ 745 (815)
+||++++++.+||+|||+++.+... .....|+..|+|||++.+....++.++|||||||++|||++|+.||......
T Consensus 152 ~nill~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~- 228 (283)
T PHA02988 152 VSFLVTENYKLKIICHGLEKILSSP--PFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTK- 228 (283)
T ss_pred hhEEECCCCcEEEcccchHhhhccc--cccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHH-
Confidence 9999999999999999999866432 2234588999999998763233789999999999999999999999753221
Q ss_pred ccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhhhh
Q 003504 746 KEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDIES 813 (815)
Q Consensus 746 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~~ 813 (815)
.........+. +...+..++.++.+++.+||+.||++||+|+++++.|+.+.+
T Consensus 229 ------~~~~~i~~~~~---------~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~ 281 (283)
T PHA02988 229 ------EIYDLIINKNN---------SLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYKF 281 (283)
T ss_pred ------HHHHHHHhcCC---------CCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence 11122221111 111123456789999999999999999999999999998764
No 24
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-41 Score=354.84 Aligned_cols=248 Identities=24% Similarity=0.369 Sum_probs=212.6
Q ss_pred cCCCCCCeecccCCeeeEEEE-cCCCcEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeC
Q 003504 508 SNFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYM 586 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 586 (815)
..|..-..||+|+.|.||.|. ..+++.||||++....+...+-+..|+.+|+..+|+|||.++..+...++.|+|||||
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym 352 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYM 352 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeec
Confidence 456677899999999999998 5678899999998877777888899999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCC
Q 003504 587 ENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKAS 666 (815)
Q Consensus 587 ~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~ 666 (815)
++|+|.+.+... .++..+...|+.++..||+||| .++|+|||||.+
T Consensus 353 ~ggsLTDvVt~~-------------------------------~~~E~qIA~Icre~l~aL~fLH---~~gIiHrDIKSD 398 (550)
T KOG0578|consen 353 EGGSLTDVVTKT-------------------------------RMTEGQIAAICREILQGLKFLH---ARGIIHRDIKSD 398 (550)
T ss_pred CCCchhhhhhcc-------------------------------cccHHHHHHHHHHHHHHHHHHH---hcceeeeccccc
Confidence 999999998642 4677888999999999999999 999999999999
Q ss_pred ceEEcCCCCeeecccccceecCCCC-ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCcc
Q 003504 667 SVYLDMNLEPRLSDFGLAKIFGNGL-DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEE 745 (815)
Q Consensus 667 NIll~~~~~~kl~Dfgla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~ 745 (815)
|||++.+|.+||+|||++..+.... .....+||+.|||||+..... |++|.||||||++++||+-|.+||-.+.+-
T Consensus 399 nILL~~~g~vKltDFGFcaqi~~~~~KR~TmVGTPYWMAPEVvtrk~--YG~KVDIWSLGIMaIEMveGEPPYlnE~Pl- 475 (550)
T KOG0578|consen 399 NILLTMDGSVKLTDFGFCAQISEEQSKRSTMVGTPYWMAPEVVTRKP--YGPKVDIWSLGIMAIEMVEGEPPYLNENPL- 475 (550)
T ss_pred eeEeccCCcEEEeeeeeeeccccccCccccccCCCCccchhhhhhcc--cCccccchhhhhHHHHHhcCCCCccCCChH-
Confidence 9999999999999999998776544 456677999999999998877 899999999999999999999999753331
Q ss_pred ccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 746 KEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 746 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
. -++.+. .+ .......++..+.++.++..+|+..||++||++.++++
T Consensus 476 -----r-AlyLIa-~n-------g~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~ 522 (550)
T KOG0578|consen 476 -----R-ALYLIA-TN-------GTPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLE 522 (550)
T ss_pred -----H-HHHHHh-hc-------CCCCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhc
Confidence 1 111111 11 11222346777889999999999999999999999986
No 25
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.6e-42 Score=358.53 Aligned_cols=260 Identities=27% Similarity=0.383 Sum_probs=219.3
Q ss_pred HHHHHHhcCCCCCCeecccCCeeeEEEEcCC-CcEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCee
Q 003504 501 ADLLSATSNFDRGTLLAEGKFGPVYRGFLPG-GIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQR 579 (815)
Q Consensus 501 ~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 579 (815)
++++-...++...+.||-|-||.||.|+|+. .-.||||.++. +....++|.+|+.+|..++|||+|+++|+|......
T Consensus 260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKE-DtMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPF 338 (1157)
T KOG4278|consen 260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPF 338 (1157)
T ss_pred chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhh-cchhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCe
Confidence 4444555677778999999999999999864 56799999976 566778999999999999999999999999999999
Q ss_pred EEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCee
Q 003504 580 IAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPII 659 (815)
Q Consensus 580 ~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~iv 659 (815)
|+|+|||.+|+|.+||++.+ ...+.-...+.||.||+.||+||. .+.+|
T Consensus 339 YIiTEfM~yGNLLdYLRecn----------------------------r~ev~avvLlyMAtQIsSaMeYLE---kknFI 387 (1157)
T KOG4278|consen 339 YIITEFMCYGNLLDYLRECN----------------------------RSEVPAVVLLYMATQISSAMEYLE---KKNFI 387 (1157)
T ss_pred EEEEecccCccHHHHHHHhc----------------------------hhhcchhHHHHHHHHHHHHHHHHH---Hhhhh
Confidence 99999999999999999863 223444556889999999999999 89999
Q ss_pred eccCCCCceEEcCCCCeeecccccceecCCCCccccccc---cccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CC
Q 003504 660 HRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARG---SPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GK 735 (815)
Q Consensus 660 HrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~g---t~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~ 735 (815)
||||.++|+|+.++-.+||+|||+++.+..+ ..+..+| ...|.|||-+.-.. ++.|+|||+|||+|||+.| |-
T Consensus 388 HRDLAARNCLVgEnhiVKvADFGLsRlMtgD-TYTAHAGAKFPIKWTAPEsLAyNt--FSiKSDVWAFGVLLWEIATYGM 464 (1157)
T KOG4278|consen 388 HRDLAARNCLVGENHIVKVADFGLSRLMTGD-TYTAHAGAKFPIKWTAPESLAYNT--FSIKSDVWAFGVLLWEIATYGM 464 (1157)
T ss_pred hhhhhhhhccccccceEEeeccchhhhhcCC-ceecccCccCcccccCcccccccc--cccchhhHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999998644 2333333 56799999887666 7999999999999999999 88
Q ss_pred CCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhhh
Q 003504 736 KPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDIE 812 (815)
Q Consensus 736 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~ 812 (815)
.||.+.. ...+.. .+...++...|+.|+..+++||+.||+++|.+||+|.++-+.++.+-
T Consensus 465 sPYPGid--------lSqVY~---------LLEkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf 524 (1157)
T KOG4278|consen 465 SPYPGID--------LSQVYG---------LLEKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMF 524 (1157)
T ss_pred CCCCCcc--------HHHHHH---------HHhccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHh
Confidence 8887522 111222 33456777789999999999999999999999999999999998763
No 26
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-42 Score=353.39 Aligned_cols=263 Identities=21% Similarity=0.246 Sum_probs=211.3
Q ss_pred hcCCCCCCeecccCCeeeEEEE-cCCCcEEEEEEeecCCcc-cHHHHHHHHHHhcCCC-CCCceeeeeEEEeCC-eeEEE
Q 003504 507 TSNFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHGSTL-TDQEAARELEYLGRIK-HPNLVPLTGYCIAGD-QRIAI 582 (815)
Q Consensus 507 ~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~-~~~lv 582 (815)
.++|...+.||.|.||.||+|+ ..+|..||||++++.... ++..-.||++.|+++. ||||+++..++.+.+ ..++|
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fV 88 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFV 88 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeee
Confidence 3567788999999999999999 667889999999764332 2334568999999998 999999999999988 89999
Q ss_pred EEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecc
Q 003504 583 YDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRD 662 (815)
Q Consensus 583 ~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrD 662 (815)
||||+. +|+++++++ +..++......|+.||.+||+|+| .+|+.|||
T Consensus 89 fE~Md~-NLYqLmK~R-----------------------------~r~fse~~irnim~QilqGL~hiH---k~GfFHRD 135 (538)
T KOG0661|consen 89 FEFMDC-NLYQLMKDR-----------------------------NRLFSESDIRNIMYQILQGLAHIH---KHGFFHRD 135 (538)
T ss_pred HHhhhh-hHHHHHhhc-----------------------------CCcCCHHHHHHHHHHHHHHHHHHH---hcCccccc
Confidence 999998 999999863 557888999999999999999999 89999999
Q ss_pred CCCCceEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCC
Q 003504 663 IKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDY 742 (815)
Q Consensus 663 lk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~ 742 (815)
+||+|||+.....+||+|||+||........+..+.|.+|+|||++..... |+.+.||||+|||++|+.+-++-|.+..
T Consensus 136 lKPENiLi~~~~~iKiaDFGLARev~SkpPYTeYVSTRWYRAPEvLLrs~~-Ys~pvD~wA~GcI~aEl~sLrPLFPG~s 214 (538)
T KOG0661|consen 136 LKPENILISGNDVIKIADFGLAREVRSKPPYTEYVSTRWYRAPEVLLRSGY-YSSPVDMWAVGCIMAELYSLRPLFPGAS 214 (538)
T ss_pred CChhheEecccceeEecccccccccccCCCcchhhhcccccchHHhhhccc-cCCchHHHHHHHHHHHHHHhcccCCCCc
Confidence 999999999888999999999999887777788889999999999887664 7999999999999999999999887643
Q ss_pred CccccccHHHHHHHH--------------HhcCC--CCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 743 PEEKEGNLVSWVRGL--------------VRNNK--GSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 743 ~~~~~~~~~~~~~~~--------------~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
.- +++.+.+..+ ..... ......-.+..-.+ .+..+..+++.+|+++||.+|||++|+++
T Consensus 215 E~---Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p-~~s~~~~~li~~ll~WDP~kRpTA~~al~ 290 (538)
T KOG0661|consen 215 EI---DQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLP-NASSEAASLIERLLAWDPDKRPTASQALQ 290 (538)
T ss_pred HH---HHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCc-ccCHHHHHHHHHHhcCCCccCccHHHHhc
Confidence 21 1222222110 00000 00111111111112 37788999999999999999999999986
Q ss_pred H
Q 003504 807 L 807 (815)
Q Consensus 807 ~ 807 (815)
.
T Consensus 291 ~ 291 (538)
T KOG0661|consen 291 H 291 (538)
T ss_pred C
Confidence 3
No 27
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=1e-40 Score=318.59 Aligned_cols=262 Identities=23% Similarity=0.320 Sum_probs=207.2
Q ss_pred cCCCCCCeecccCCeeeEEEE-cCCCcEEEEEEeecCCc--ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEE
Q 003504 508 SNFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHGST--LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYD 584 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 584 (815)
.+|...+.+|+|.||.||+|+ ..+|+.||||+++.+.. .......||++.|+.++||||+.+++++...+...+|+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 357778999999999999999 57899999999976432 224567899999999999999999999999999999999
Q ss_pred eCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCC
Q 003504 585 YMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIK 664 (815)
Q Consensus 585 y~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk 664 (815)
||+. +|...+++. ...++-.....++.++.+|++||| +..|+|||||
T Consensus 82 fm~t-dLe~vIkd~-----------------------------~i~l~pa~iK~y~~m~LkGl~y~H---~~~IlHRDlK 128 (318)
T KOG0659|consen 82 FMPT-DLEVVIKDK-----------------------------NIILSPADIKSYMLMTLKGLAYCH---SKWILHRDLK 128 (318)
T ss_pred eccc-cHHHHhccc-----------------------------ccccCHHHHHHHHHHHHHHHHHHH---hhhhhcccCC
Confidence 9998 999999763 557888889999999999999999 8999999999
Q ss_pred CCceEEcCCCCeeecccccceecCCCCc-cccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCC
Q 003504 665 ASSVYLDMNLEPRLSDFGLAKIFGNGLD-EEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYP 743 (815)
Q Consensus 665 ~~NIll~~~~~~kl~Dfgla~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~ 743 (815)
|.|+|++.+|.+||+|||+|+.+.+... ....+-|.+|+|||++.+... |+...||||.||++.||+.|.+-|.+...
T Consensus 129 PnNLLis~~g~lKiADFGLAr~f~~p~~~~~~~V~TRWYRAPELLfGsr~-Yg~~VDmWavGCI~AELllr~P~fpG~sD 207 (318)
T KOG0659|consen 129 PNNLLISSDGQLKIADFGLARFFGSPNRIQTHQVVTRWYRAPELLFGSRQ-YGTGVDMWAVGCIFAELLLRVPFFPGDSD 207 (318)
T ss_pred ccceEEcCCCcEEeecccchhccCCCCcccccceeeeeccChHHhccchh-cCCcchhhhHHHHHHHHHccCCCCCCCch
Confidence 9999999999999999999999876543 333368999999999998876 78899999999999999999887765322
Q ss_pred ccccccHHHHHHHHH--h-cCC-----------CCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003504 744 EEKEGNLVSWVRGLV--R-NNK-----------GSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGL 807 (815)
Q Consensus 744 ~~~~~~~~~~~~~~~--~-~~~-----------~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~ 807 (815)
- +++...++.+= . +.| ....-.+.... -...+..+..+++..++..||.+|++++|++++
T Consensus 208 i---dQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~-lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 208 I---DQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNN-LFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred H---HHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCcccc-ccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 1 12222111110 0 000 01011111111 122345667999999999999999999999864
No 28
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-41 Score=350.23 Aligned_cols=248 Identities=26% Similarity=0.349 Sum_probs=204.7
Q ss_pred HhcCCCCCCeecccCCeeeEEEE-cCCCcEEEEEEeecCCc---ccHHHHHHHHHHhcCC-CCCCceeeeeEEEeCCeeE
Q 003504 506 ATSNFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHGST---LTDQEAARELEYLGRI-KHPNLVPLTGYCIAGDQRI 580 (815)
Q Consensus 506 ~~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~ 580 (815)
...+|.+++.||+|+|++||+|+ ...++.+|||++.+.-. ...+.+.+|-++|.+| .||.|++|+..|.+....|
T Consensus 71 ~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLY 150 (604)
T KOG0592|consen 71 TPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLY 150 (604)
T ss_pred ChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceE
Confidence 34689999999999999999999 56789999999966422 2334567899999999 8999999999999999999
Q ss_pred EEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeee
Q 003504 581 AIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIH 660 (815)
Q Consensus 581 lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivH 660 (815)
+|+||+++|+|.++|++. ..++.....-.|.+|..||+||| +.||||
T Consensus 151 FvLe~A~nGdll~~i~K~------------------------------Gsfde~caR~YAAeIldAleylH---~~GIIH 197 (604)
T KOG0592|consen 151 FVLEYAPNGDLLDLIKKY------------------------------GSFDETCARFYAAEILDALEYLH---SNGIIH 197 (604)
T ss_pred EEEEecCCCcHHHHHHHh------------------------------CcchHHHHHHHHHHHHHHHHHHH---hcCcee
Confidence 999999999999999863 23555556678999999999999 999999
Q ss_pred ccCCCCceEEcCCCCeeecccccceecCCCC------------cc--ccccccccccCCcccCCCCCCCCCcCcchhHHH
Q 003504 661 RDIKASSVYLDMNLEPRLSDFGLAKIFGNGL------------DE--EIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGV 726 (815)
Q Consensus 661 rDlk~~NIll~~~~~~kl~Dfgla~~~~~~~------------~~--~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gv 726 (815)
|||||+|||+|+||++||+|||.|+.+.+.. .. ..++||..|.+||++.... .+..+|+|+|||
T Consensus 198 RDlKPENILLd~dmhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~--~~~~sDiWAlGC 275 (604)
T KOG0592|consen 198 RDLKPENILLDKDGHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSP--AGPSSDLWALGC 275 (604)
T ss_pred ccCChhheeEcCCCcEEEeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCC--CCcccchHHHHH
Confidence 9999999999999999999999999875321 11 4467999999999998776 789999999999
Q ss_pred HHHHHHhCCCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 727 VLLELITGKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 727 vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
++|.|+.|++||.+....- .+++++. +....++..++.+.+|+.+.+..||.+|++.+||.+
T Consensus 276 ilyQmlaG~PPFra~Neyl-------iFqkI~~-----------l~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~ 337 (604)
T KOG0592|consen 276 ILYQMLAGQPPFRAANEYL-------IFQKIQA-----------LDYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKA 337 (604)
T ss_pred HHHHHhcCCCCCccccHHH-------HHHHHHH-----------hcccCCCCCCHHHHHHHHHHHccCccccccHHHHhh
Confidence 9999999999997633211 1222222 112335555678999999999999999999988765
No 29
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=3.3e-40 Score=358.49 Aligned_cols=287 Identities=26% Similarity=0.355 Sum_probs=207.2
Q ss_pred hcCCCCCCeecccCCeeeEEEEc------CCCcEEEEEEeecCCc-ccHHHHHHHHHHhcCC-CCCCceeeeeEEEeCC-
Q 003504 507 TSNFDRGTLLAEGKFGPVYRGFL------PGGIHVAVKVLVHGST-LTDQEAARELEYLGRI-KHPNLVPLTGYCIAGD- 577 (815)
Q Consensus 507 ~~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~- 577 (815)
.++|.+.+.||+|+||.||+|.. .++..||||++..... .....+.+|+.++.++ +||||++++|+|....
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNG 85 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCC
Confidence 46788999999999999999973 2356799999875432 2345788999999999 8999999999987644
Q ss_pred eeEEEEEeCCCCChhhhhccCCCCCccccC----------------CCC------------CccccCC----CccccccC
Q 003504 578 QRIAIYDYMENGNLQNLLHDLPLGVQTTED----------------WST------------DTWEEDG----TNSIQNVG 625 (815)
Q Consensus 578 ~~~lv~ey~~~gsL~~~l~~~~~~~~~~~~----------------~~~------------~~~~~~~----~~~~~~~~ 625 (815)
..++||||+++|+|.++++........... ... ..+.... ...-....
T Consensus 86 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (338)
T cd05102 86 PLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDD 165 (338)
T ss_pred ceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccc
Confidence 578999999999999999753211000000 000 0000000 00000001
Q ss_pred CCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCceEEcCCCCeeecccccceecCCCC---ccccccccccc
Q 003504 626 SEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGL---DEEIARGSPGY 702 (815)
Q Consensus 626 ~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~---~~~~~~gt~~y 702 (815)
....++++....+++.|+++||+||| +.+|+||||||+|||++.++.+||+|||+++...... ......++..|
T Consensus 166 ~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y 242 (338)
T cd05102 166 LWKSPLTMEDLICYSFQVARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKW 242 (338)
T ss_pred cccCCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccc
Confidence 11346889999999999999999999 8999999999999999999999999999998654322 11223356789
Q ss_pred cCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHH
Q 003504 703 IPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQME 781 (815)
Q Consensus 703 ~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 781 (815)
+|||++.+.. ++.++|||||||++|||++ |+.||......+ ..... ..... ....+..++.
T Consensus 243 ~aPE~~~~~~--~~~~sDiwslG~il~el~~~g~~pf~~~~~~~------~~~~~-~~~~~---------~~~~~~~~~~ 304 (338)
T cd05102 243 MAPESIFDKV--YTTQSDVWSFGVLLWEIFSLGASPYPGVQINE------EFCQR-LKDGT---------RMRAPENATP 304 (338)
T ss_pred cCcHHhhcCC--CCcccCHHHHHHHHHHHHhCCCCCCCCCCccH------HHHHH-HhcCC---------CCCCCCCCCH
Confidence 9999987665 7899999999999999997 999997532211 11111 11111 0111334556
Q ss_pred HHHHHHhhccccCCCCCCCHHHHHHHHHhhhhc
Q 003504 782 EALKIGYLCTADLPLKRPSMQQIVGLLKDIEST 814 (815)
Q Consensus 782 ~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~~~ 814 (815)
++.+++.+||+.||++||++.++++.|+++.+.
T Consensus 305 ~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~~ 337 (338)
T cd05102 305 EIYRIMLACWQGDPKERPTFSALVEILGDLLQE 337 (338)
T ss_pred HHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 789999999999999999999999999988654
No 30
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-39 Score=330.64 Aligned_cols=266 Identities=25% Similarity=0.351 Sum_probs=208.2
Q ss_pred hcCCCCCCeecccCCeeeEEEEcCCCcEEEEEEeecCCcccHHHHHHHHHHhcCC--CCCCceeeeeEEEeCC----eeE
Q 003504 507 TSNFDRGTLLAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRI--KHPNLVPLTGYCIAGD----QRI 580 (815)
Q Consensus 507 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l--~H~niv~l~g~~~~~~----~~~ 580 (815)
.......+.||+|+||+||+|.++ |..||||++. ..++..+.+|.+|++.+ +|+||+.+++.-..+. +.+
T Consensus 210 arqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~---srdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLw 285 (513)
T KOG2052|consen 210 ARQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFS---SRDERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLW 285 (513)
T ss_pred hheeEEEEEecCccccceeecccc-CCceEEEEec---ccchhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEE
Confidence 345677899999999999999998 7789999994 45677888888888764 9999999999765543 679
Q ss_pred EEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHh-----cCCC
Q 003504 581 AIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLH-----HGCS 655 (815)
Q Consensus 581 lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH-----~~~~ 655 (815)
||++|.+.|||++||.. ..++....++++..+|.||++|| +...
T Consensus 286 LvTdYHe~GSL~DyL~r-------------------------------~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgK 334 (513)
T KOG2052|consen 286 LVTDYHEHGSLYDYLNR-------------------------------NTVTTEGMLKLALSIASGLAHLHMEIVGTQGK 334 (513)
T ss_pred EeeecccCCcHHHHHhh-------------------------------ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCC
Confidence 99999999999999964 35778889999999999999999 3347
Q ss_pred CCeeeccCCCCceEEcCCCCeeecccccceecCCCC-----ccccccccccccCCcccCCCCC----CCCCcCcchhHHH
Q 003504 656 PPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGL-----DEEIARGSPGYIPPEFAQPDSD----FPTPKSDVYCYGV 726 (815)
Q Consensus 656 ~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~----~~~~~~Dv~S~Gv 726 (815)
+.|.|||||+.||||..++++.|+|+|+|....... .....+||.+|||||++....+ ..-..+||||||.
T Consensus 335 PaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgL 414 (513)
T KOG2052|consen 335 PAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGL 414 (513)
T ss_pred chhhccccccccEEEccCCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHH
Confidence 899999999999999999999999999998876542 4566789999999998764321 1234689999999
Q ss_pred HHHHHHhC----------CCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCC
Q 003504 727 VLLELITG----------KKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPL 796 (815)
Q Consensus 727 vl~el~tg----------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~ 796 (815)
|+||+.-+ +.||.+-.+.+- + .+-++..+...+.+..++.+.. ..+.+..+.++|+.||..+|.
T Consensus 415 VlWEiarRc~~ggi~eey~~Pyyd~Vp~DP--s-~eeMrkVVCv~~~RP~ipnrW~---s~~~l~~m~klMkeCW~~Np~ 488 (513)
T KOG2052|consen 415 VLWEIARRCESGGIVEEYQLPYYDVVPSDP--S-FEEMRKVVCVQKLRPNIPNRWK---SDPALRVMAKLMKECWYANPA 488 (513)
T ss_pred HHHHHHHHhhcCCEehhhcCCcccCCCCCC--C-HHHHhcceeecccCCCCCcccc---cCHHHHHHHHHHHHhhcCCch
Confidence 99999863 357776433221 1 1112222222222222222222 457889999999999999999
Q ss_pred CCCCHHHHHHHHHhhhh
Q 003504 797 KRPSMQQIVGLLKDIES 813 (815)
Q Consensus 797 ~RPs~~~v~~~L~~i~~ 813 (815)
.|-|+-.+.+.|.++.+
T Consensus 489 aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 489 ARLTALRIKKTLAKLSN 505 (513)
T ss_pred hhhHHHHHHHHHHHHhc
Confidence 99999999999988763
No 31
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-40 Score=349.77 Aligned_cols=256 Identities=25% Similarity=0.374 Sum_probs=215.9
Q ss_pred HhcCCCCCCeecccCCeeeEEEEcC---CC--cEEEEEEeecC-CcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCee
Q 003504 506 ATSNFDRGTLLAEGKFGPVYRGFLP---GG--IHVAVKVLVHG-STLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQR 579 (815)
Q Consensus 506 ~~~~~~~~~~ig~G~~g~Vy~~~~~---~~--~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 579 (815)
+.+..+..+.||.|-||.||+|+.. .| ..||||..+.+ ...+.+.|..|..+|++++||||++++|+|.+ .+.
T Consensus 387 ~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~ 465 (974)
T KOG4257|consen 387 RRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPM 465 (974)
T ss_pred ehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-cce
Confidence 3445666789999999999999842 23 35899998874 34557789999999999999999999999976 589
Q ss_pred EEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCee
Q 003504 580 IAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPII 659 (815)
Q Consensus 580 ~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~iv 659 (815)
++|||.++.|.|.+||+.+ ...++.......+.|+..||+||| +..+|
T Consensus 466 WivmEL~~~GELr~yLq~n-----------------------------k~sL~l~tL~ly~~Qi~talaYLe---SkrfV 513 (974)
T KOG4257|consen 466 WIVMELAPLGELREYLQQN-----------------------------KDSLPLRTLTLYCYQICTALAYLE---SKRFV 513 (974)
T ss_pred eEEEecccchhHHHHHHhc-----------------------------cccchHHHHHHHHHHHHHHHHHHH---hhchh
Confidence 9999999999999999863 445778888999999999999999 89999
Q ss_pred eccCCCCceEEcCCCCeeecccccceecCCCCcccccc--ccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CCC
Q 003504 660 HRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIAR--GSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GKK 736 (815)
Q Consensus 660 HrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~--gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~ 736 (815)
||||.++|||+....-+|++|||+++.+....-..... -...|||||.+.-.. ++.+||||-|||+|||++. |.+
T Consensus 514 HRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYkaS~~kLPIKWmaPESINfRr--FTtASDVWMFgVCmWEIl~lGvk 591 (974)
T KOG4257|consen 514 HRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYKASRGKLPIKWMAPESINFRR--FTTASDVWMFGVCMWEILSLGVK 591 (974)
T ss_pred hhhhhhhheeecCcceeeecccchhhhccccchhhccccccceeecCccccchhc--ccchhhHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999887655333333 356899999998776 8999999999999999998 999
Q ss_pred CCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhhhh
Q 003504 737 PLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDIES 813 (815)
Q Consensus 737 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~~ 813 (815)
||.+-. +..+...+..+-+...|+.|+..+..+|.+||+.||.+||.+.++...|.++.+
T Consensus 592 Pfqgvk-----------------NsDVI~~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 592 PFQGVK-----------------NSDVIGHIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred cccccc-----------------ccceEEEecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 998632 222333344455666789999999999999999999999999999999988754
No 32
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-39 Score=333.97 Aligned_cols=264 Identities=24% Similarity=0.326 Sum_probs=202.2
Q ss_pred CCCCeecccCCeeeEEEEcCCCcEEEEEEeecCCcccHHHHHHHHHHhcC--CCCCCceeeeeEEEeCC----eeEEEEE
Q 003504 511 DRGTLLAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGR--IKHPNLVPLTGYCIAGD----QRIAIYD 584 (815)
Q Consensus 511 ~~~~~ig~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~g~~~~~~----~~~lv~e 584 (815)
...++||+|+||.||||++. ++.||||++. ..+.+.|..|-+|..- ++|+||++++++-..+. ++++|+|
T Consensus 213 ~l~eli~~Grfg~V~KaqL~-~~~VAVKifp---~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~ 288 (534)
T KOG3653|consen 213 QLLELIGRGRFGCVWKAQLD-NRLVAVKIFP---EQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTE 288 (534)
T ss_pred hhHHHhhcCccceeehhhcc-CceeEEEecC---HHHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEee
Confidence 34578999999999999987 4899999994 4566778877777664 58999999999876655 8899999
Q ss_pred eCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcC------CCCCe
Q 003504 585 YMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHG------CSPPI 658 (815)
Q Consensus 585 y~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~------~~~~i 658 (815)
|.+.|+|.+||.. ..++|....+||..+|+||+|||++ .+++|
T Consensus 289 fh~kGsL~dyL~~-------------------------------ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~I 337 (534)
T KOG3653|consen 289 FHPKGSLCDYLKA-------------------------------NTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPI 337 (534)
T ss_pred eccCCcHHHHHHh-------------------------------ccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCcc
Confidence 9999999999975 3689999999999999999999955 36789
Q ss_pred eeccCCCCceEEcCCCCeeecccccceecCCCCc---cccccccccccCCcccCCCCCCC----CCcCcchhHHHHHHHH
Q 003504 659 IHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLD---EEIARGSPGYIPPEFAQPDSDFP----TPKSDVYCYGVVLLEL 731 (815)
Q Consensus 659 vHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~----~~~~Dv~S~Gvvl~el 731 (815)
+|||||++||||..|+++.|+|||+|..+..+.. ....+||.+|||||++.+....- -.+.||||+|.|||||
T Consensus 338 aHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi 417 (534)
T KOG3653|consen 338 AHRDLKSKNVLVKNDLTCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEI 417 (534)
T ss_pred ccccccccceEEccCCcEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998876542 23357999999999998765321 1357999999999999
Q ss_pred HhCCCCCC--------CCCCccccc-cHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHH
Q 003504 732 ITGKKPLG--------DDYPEEKEG-NLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQ 802 (815)
Q Consensus 732 ~tg~~p~~--------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ 802 (815)
+++..-+. ..+.++... .-.+-++.++-.++.+..+..... ....+.-+.+.+..||..||+.|.|+.
T Consensus 418 ~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~---~h~~~~~l~et~EeCWDhDaeARLTA~ 494 (534)
T KOG3653|consen 418 ASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWR---KHAGMAVLCETIEECWDHDAEARLTAG 494 (534)
T ss_pred HhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhccCCCChhhhh---cCccHHHHHHHHHHHcCCchhhhhhhH
Confidence 99654332 222222211 122333333333222222222222 124566788999999999999999999
Q ss_pred HHHHHHHhhh
Q 003504 803 QIVGLLKDIE 812 (815)
Q Consensus 803 ~v~~~L~~i~ 812 (815)
=|-+++.++.
T Consensus 495 Cv~eR~~~l~ 504 (534)
T KOG3653|consen 495 CVEERMAELM 504 (534)
T ss_pred HHHHHHHHHh
Confidence 9988887764
No 33
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.6e-40 Score=350.77 Aligned_cols=249 Identities=26% Similarity=0.371 Sum_probs=207.4
Q ss_pred HhcCCCCCCeecccCCeeeEEEE-cCCCcEEEEEEeecC----Cc-ccHHHHHHHHHHhcCCC-CCCceeeeeEEEeCCe
Q 003504 506 ATSNFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHG----ST-LTDQEAARELEYLGRIK-HPNLVPLTGYCIAGDQ 578 (815)
Q Consensus 506 ~~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~l~~~----~~-~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~ 578 (815)
....|.+++.||+|+||.||.|+ ..++..||||++.+. .. ...+.+.+|+.++++++ ||||++++.++.....
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~ 94 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK 94 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence 34678999999999999999998 457899999977553 11 23456778999999999 9999999999999999
Q ss_pred eEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCe
Q 003504 579 RIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPI 658 (815)
Q Consensus 579 ~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~i 658 (815)
.++||||+.+|+|.+++.. ...+......+++.|++.|++|+| +++|
T Consensus 95 ~~ivmEy~~gGdL~~~i~~------------------------------~g~l~E~~ar~~F~Qlisav~y~H---~~gi 141 (370)
T KOG0583|consen 95 IYIVMEYCSGGDLFDYIVN------------------------------KGRLKEDEARKYFRQLISAVAYCH---SRGI 141 (370)
T ss_pred EEEEEEecCCccHHHHHHH------------------------------cCCCChHHHHHHHHHHHHHHHHHH---hCCE
Confidence 9999999999999999975 234555778899999999999999 8999
Q ss_pred eeccCCCCceEEcCC-CCeeecccccceec-CCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCC
Q 003504 659 IHRDIKASSVYLDMN-LEPRLSDFGLAKIF-GNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKK 736 (815)
Q Consensus 659 vHrDlk~~NIll~~~-~~~kl~Dfgla~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~ 736 (815)
+||||||+|||+|.+ +++||+|||++... ..+......+||+.|+|||++.+...+.+.++||||+||++|.|++|+.
T Consensus 142 ~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~ 221 (370)
T KOG0583|consen 142 VHRDLKPENILLDGNEGNLKLSDFGLSAISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRL 221 (370)
T ss_pred eeCCCCHHHEEecCCCCCEEEeccccccccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCC
Confidence 999999999999999 99999999999988 4566777889999999999999876346789999999999999999999
Q ss_pred CCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHH-HHHHHHHHhhccccCCCCCCCHHHHH
Q 003504 737 PLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQ-MEEALKIGYLCTADLPLKRPSMQQIV 805 (815)
Q Consensus 737 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~Cl~~dP~~RPs~~~v~ 805 (815)
||++.. .....+..... +. ..|... ..++..++.+|+..||.+|+++.+++
T Consensus 222 PF~d~~-------~~~l~~ki~~~----~~-------~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~ 273 (370)
T KOG0583|consen 222 PFDDSN-------VPNLYRKIRKG----EF-------KIPSYLLSPEARSLIEKMLVPDPSTRITLLEIL 273 (370)
T ss_pred CCCCcc-------HHHHHHHHhcC----Cc-------cCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHh
Confidence 998632 22222221111 01 113333 67889999999999999999999998
No 34
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=5.9e-40 Score=343.07 Aligned_cols=245 Identities=23% Similarity=0.324 Sum_probs=203.4
Q ss_pred HhcCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCcccH---HHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEE
Q 003504 506 ATSNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGSTLTD---QEAARELEYLGRIKHPNLVPLTGYCIAGDQRIA 581 (815)
Q Consensus 506 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~---~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 581 (815)
..++|+...+||+|+||+||.|+. .+|..+|+|++++...... +.++.|-++|...++|+||+++..|.+.+..||
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence 457899999999999999999995 5699999999987543333 346789999999999999999999999999999
Q ss_pred EEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeec
Q 003504 582 IYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHR 661 (815)
Q Consensus 582 v~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHr 661 (815)
||||++||++..+|.. ...++.......+.+++-|++-+| ..|||||
T Consensus 219 iMEylPGGD~mTLL~~------------------------------~~~L~e~~arfYiaE~vlAI~~iH---~~gyIHR 265 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLMR------------------------------KDTLTEDWARFYIAETVLAIESIH---QLGYIHR 265 (550)
T ss_pred EEEecCCccHHHHHHh------------------------------cCcCchHHHHHHHHHHHHHHHHHH---HcCcccc
Confidence 9999999999999975 224444445566778899999999 8999999
Q ss_pred cCCCCceEEcCCCCeeecccccceecCC------------------C-----Cc-------------------------c
Q 003504 662 DIKASSVYLDMNLEPRLSDFGLAKIFGN------------------G-----LD-------------------------E 693 (815)
Q Consensus 662 Dlk~~NIll~~~~~~kl~Dfgla~~~~~------------------~-----~~-------------------------~ 693 (815)
||||+|+|||..|++||+|||++.-+.. . .. .
T Consensus 266 DIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a 345 (550)
T KOG0605|consen 266 DIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLA 345 (550)
T ss_pred cCChhheeecCCCCEeeccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhh
Confidence 9999999999999999999999853211 0 00 0
Q ss_pred ccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccC
Q 003504 694 EIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRD 773 (815)
Q Consensus 694 ~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 773 (815)
...+|||.|||||++.+.. |+..+|+||+|||||||+.|.+||....+.+...++..|...+....
T Consensus 346 ~StVGTPDYiAPEVll~kg--Y~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~------------ 411 (550)
T KOG0605|consen 346 YSTVGTPDYIAPEVLLGKG--YGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPE------------ 411 (550)
T ss_pred hcccCCccccchHHHhcCC--CCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCC------------
Confidence 1123999999999999887 79999999999999999999999999999999999998876543221
Q ss_pred CCCHHHHHHHHHHHhhccccCCCCCCC
Q 003504 774 TGPEKQMEEALKIGYLCTADLPLKRPS 800 (815)
Q Consensus 774 ~~~~~~~~~~~~l~~~Cl~~dP~~RPs 800 (815)
......+..++|.+|+. ||+.|--
T Consensus 412 --~~~~s~eA~DLI~rll~-d~~~RLG 435 (550)
T KOG0605|consen 412 --EVDLSDEAKDLITRLLC-DPENRLG 435 (550)
T ss_pred --cCcccHHHHHHHHHHhc-CHHHhcC
Confidence 11233678899999999 9999985
No 35
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.9e-40 Score=311.14 Aligned_cols=248 Identities=24% Similarity=0.346 Sum_probs=205.7
Q ss_pred hcCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCC---cccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEE
Q 003504 507 TSNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGS---TLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAI 582 (815)
Q Consensus 507 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv 582 (815)
.++|++++.+|+|.||.||.|+. +++-.||+|++.+.. ...+.++.+|++|-..|+||||++++||+.+....|++
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi 100 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI 100 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence 45799999999999999999994 567889999997642 23456899999999999999999999999999999999
Q ss_pred EEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecc
Q 003504 583 YDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRD 662 (815)
Q Consensus 583 ~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrD 662 (815)
+||.+.|++...|++.+ ....+......+..|+|.||.|+| .++++|||
T Consensus 101 lEya~~gel~k~L~~~~----------------------------~~~f~e~~~a~Yi~q~A~Al~y~h---~k~VIhRd 149 (281)
T KOG0580|consen 101 LEYAPRGELYKDLQEGR----------------------------MKRFDEQRAATYIKQLANALLYCH---LKRVIHRD 149 (281)
T ss_pred EEecCCchHHHHHHhcc----------------------------cccccccchhHHHHHHHHHHHHhc---cCCcccCC
Confidence 99999999999998532 122333344567889999999999 89999999
Q ss_pred CCCCceEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCC
Q 003504 663 IKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDY 742 (815)
Q Consensus 663 lk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~ 742 (815)
|||+|+|++.++..||+|||.+.... .....+.+||..|.|||...+.. .+...|+|++||+.||++.|.+||....
T Consensus 150 iKpenlLlg~~~~lkiAdfGwsV~~p-~~kR~tlcgt~dyl~pEmv~~~~--hd~~Vd~w~lgvl~yeflvg~ppFes~~ 226 (281)
T KOG0580|consen 150 IKPENLLLGSAGELKIADFGWSVHAP-SNKRKTLCGTLDYLPPEMVEGRG--HDKFVDLWSLGVLCYEFLVGLPPFESQS 226 (281)
T ss_pred CCHHHhccCCCCCeeccCCCceeecC-CCCceeeecccccCCHhhcCCCC--ccchhhHHHHHHHHHHHHhcCCchhhhh
Confidence 99999999999999999999998654 45667789999999999998877 6889999999999999999999997643
Q ss_pred CccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 743 PEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 743 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
..+.+..+.+ .+. ..|.....++.+++.+|+..+|.+|.+..|+++
T Consensus 227 ~~etYkrI~k-----------~~~-------~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~ 272 (281)
T KOG0580|consen 227 HSETYKRIRK-----------VDL-------KFPSTISGGAADLISRLLVKNPIERLALTEVMD 272 (281)
T ss_pred hHHHHHHHHH-----------ccc-------cCCcccChhHHHHHHHHhccCccccccHHHHhh
Confidence 2222211111 111 124556678899999999999999999999875
No 36
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.3e-39 Score=346.68 Aligned_cols=248 Identities=25% Similarity=0.308 Sum_probs=214.1
Q ss_pred cCCCCCCeecccCCeeeEEEE-cCCCcEEEEEEeecCCc---ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEE
Q 003504 508 SNFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHGST---LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIY 583 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 583 (815)
.-|..++.||+|+.|.|..|+ ..+|+.+|||++.+... .....+++|+.+|+-+.||||+++++++++..+.|+|.
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl 91 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL 91 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence 346778999999999999999 46899999999977532 23567899999999999999999999999999999999
Q ss_pred EeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccC
Q 003504 584 DYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDI 663 (815)
Q Consensus 584 ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDl 663 (815)
||+++|.|+++|-. ..++......+.+.||..|+.|+| ..+|+||||
T Consensus 92 Eyv~gGELFdylv~------------------------------kG~l~e~eaa~ff~QIi~gv~yCH---~~~icHRDL 138 (786)
T KOG0588|consen 92 EYVPGGELFDYLVR------------------------------KGPLPEREAAHFFRQILDGVSYCH---AFNICHRDL 138 (786)
T ss_pred EecCCchhHHHHHh------------------------------hCCCCCHHHHHHHHHHHHHHHHHh---hhcceeccC
Confidence 99999999999965 335667778899999999999999 899999999
Q ss_pred CCCceEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCC
Q 003504 664 KASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYP 743 (815)
Q Consensus 664 k~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~ 743 (815)
||+|+|+|..+++||+|||+|-.-.++.-..+.||++.|.|||++.+..+ .+.++||||+|||+|.|+||+.||++++
T Consensus 139 KpENlLLd~~~nIKIADFGMAsLe~~gklLeTSCGSPHYA~PEIV~G~pY-dG~~sDVWSCGVILfALLtG~LPFdDdN- 216 (786)
T KOG0588|consen 139 KPENLLLDVKNNIKIADFGMASLEVPGKLLETSCGSPHYAAPEIVSGRPY-DGRPSDVWSCGVILFALLTGKLPFDDDN- 216 (786)
T ss_pred CchhhhhhcccCEeeeccceeecccCCccccccCCCcccCCchhhcCCCC-CCCccccchhHHHHHHHHhCCCCCCCcc-
Confidence 99999999999999999999998888888888999999999999999885 6889999999999999999999998533
Q ss_pred ccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003504 744 EEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGL 807 (815)
Q Consensus 744 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~ 807 (815)
+.....+..+. .-..|.+.+.++++|+.+++..||++|.|++||++.
T Consensus 217 ------ir~LLlKV~~G-----------~f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kH 263 (786)
T KOG0588|consen 217 ------IRVLLLKVQRG-----------VFEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKH 263 (786)
T ss_pred ------HHHHHHHHHcC-----------cccCCCcCCHHHHHHHHHHhccCccccccHHHHhhC
Confidence 22222221111 112367778899999999999999999999999874
No 37
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=3.4e-39 Score=341.60 Aligned_cols=250 Identities=22% Similarity=0.247 Sum_probs=201.0
Q ss_pred CCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCc---ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEe
Q 003504 510 FDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGST---LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDY 585 (815)
Q Consensus 510 ~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 585 (815)
|+..+.||+|+||.||+|.. .+++.||||.+..... .....+.+|+.++.+++|+||+++++++.+.+..++||||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence 66778999999999999985 5789999999865322 2234578899999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCC
Q 003504 586 MENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKA 665 (815)
Q Consensus 586 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~ 665 (815)
+++|+|..++... ....+++..+..++.|++.||+||| +.+|+||||||
T Consensus 82 ~~~g~L~~~~~~~----------------------------~~~~~~~~~~~~~~~qi~~~l~~lH---~~~iiH~dikp 130 (285)
T cd05631 82 MNGGDLKFHIYNM----------------------------GNPGFDEQRAIFYAAELCCGLEDLQ---RERIVYRDLKP 130 (285)
T ss_pred cCCCcHHHHHHhh----------------------------CCCCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCH
Confidence 9999999888542 1235788889999999999999999 89999999999
Q ss_pred CceEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCcc
Q 003504 666 SSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEE 745 (815)
Q Consensus 666 ~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~ 745 (815)
+|||+++++.+||+|||++.............|+..|+|||++.+.. ++.++|||||||++|||++|+.||.......
T Consensus 131 ~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~--~~~~~DvwslGvil~el~~g~~pf~~~~~~~ 208 (285)
T cd05631 131 ENILLDDRGHIRISDLGLAVQIPEGETVRGRVGTVGYMAPEVINNEK--YTFSPDWWGLGCLIYEMIQGQSPFRKRKERV 208 (285)
T ss_pred HHEEECCCCCEEEeeCCCcEEcCCCCeecCCCCCCCccCHhhhcCCC--CCcccCchhHHHHHHHHHhCCCCCCCCCcch
Confidence 99999999999999999998765444444557999999999998765 7899999999999999999999998643221
Q ss_pred ccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCC-----HHHHHH
Q 003504 746 KEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPS-----MQQIVG 806 (815)
Q Consensus 746 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs-----~~~v~~ 806 (815)
....+. ...... ....+...+.++.+++.+||+.||++||+ ++++++
T Consensus 209 ~~~~~~----~~~~~~----------~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 209 KREEVD----RRVKED----------QEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred hHHHHH----HHhhcc----------cccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence 111111 111100 01113344567899999999999999997 788875
No 38
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=7.6e-39 Score=342.45 Aligned_cols=277 Identities=24% Similarity=0.350 Sum_probs=205.6
Q ss_pred cCCCCCCeecccCCeeeEEEEcCC-----------------CcEEEEEEeecCCc-ccHHHHHHHHHHhcCCCCCCceee
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFLPG-----------------GIHVAVKVLVHGST-LTDQEAARELEYLGRIKHPNLVPL 569 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~~~-----------------~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l 569 (815)
++|.+.+.||+|+||.||+|..++ +..||+|.+..... .....+.+|++++.+++||||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 568888999999999999997532 34699999876432 234578999999999999999999
Q ss_pred eeEEEeCCeeEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHH
Q 003504 570 TGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAF 649 (815)
Q Consensus 570 ~g~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~y 649 (815)
+|++.+.+..++||||+++|+|.+++.......... ...... ........++|....+++.|++.||+|
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~----------~~~~~~-~~~~~~~~~~~~~~~~i~~~i~~al~~ 153 (304)
T cd05096 85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEE----------NGNDAV-PPAHCLPAISYSSLLHVALQIASGMKY 153 (304)
T ss_pred EEEEecCCceEEEEecCCCCcHHHHHHhcccccccc----------cccccc-ccccccccccHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999996532110000 000000 001123468899999999999999999
Q ss_pred HhcCCCCCeeeccCCCCceEEcCCCCeeecccccceecCCCCc---cccccccccccCCcccCCCCCCCCCcCcchhHHH
Q 003504 650 LHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLD---EEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGV 726 (815)
Q Consensus 650 LH~~~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gv 726 (815)
|| +.+|+||||||+|||++.++.+||+|||+++....... .....++..|+|||++.... ++.++||||||+
T Consensus 154 lH---~~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~Dv~slG~ 228 (304)
T cd05096 154 LS---SLNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGK--FTTASDVWAFGV 228 (304)
T ss_pred HH---HCCccccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCC--CCchhhhHHHHH
Confidence 99 88999999999999999999999999999987643321 12233578899999987655 789999999999
Q ss_pred HHHHHHh--CCCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHH
Q 003504 727 VLLELIT--GKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQI 804 (815)
Q Consensus 727 vl~el~t--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v 804 (815)
++|||++ +..||...... .....+.......... . ....+..++..+.+++.+||+.||++||+|++|
T Consensus 229 ~l~el~~~~~~~p~~~~~~~----~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i 298 (304)
T cd05096 229 TLWEILMLCKEQPYGELTDE----QVIENAGEFFRDQGRQ-V-----YLFRPPPCPQGLYELMLQCWSRDCRERPSFSDI 298 (304)
T ss_pred HHHHHHHccCCCCCCcCCHH----HHHHHHHHHhhhcccc-c-----cccCCCCCCHHHHHHHHHHccCCchhCcCHHHH
Confidence 9999987 55677653222 2222222222221100 0 011123456688999999999999999999999
Q ss_pred HHHHHh
Q 003504 805 VGLLKD 810 (815)
Q Consensus 805 ~~~L~~ 810 (815)
.+.|++
T Consensus 299 ~~~l~~ 304 (304)
T cd05096 299 HAFLTE 304 (304)
T ss_pred HHHHhC
Confidence 998863
No 39
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=9.1e-40 Score=340.54 Aligned_cols=245 Identities=23% Similarity=0.365 Sum_probs=208.9
Q ss_pred cCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCcc--cHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEE
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGSTL--TDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYD 584 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 584 (815)
++|.+.+.||+|+||.||||+- .+.+.||+|.+.+.... +-+.+.+|++|+++++|||||.++++|+...+.++|.|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 4677889999999999999994 56788999998764332 33568899999999999999999999999999999999
Q ss_pred eCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCC
Q 003504 585 YMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIK 664 (815)
Q Consensus 585 y~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk 664 (815)
|+.+ +|..+|.+ +..+.......|+.|+..||.||| +.+|.|||+|
T Consensus 82 ~a~g-~L~~il~~------------------------------d~~lpEe~v~~~a~~LVsaL~yLh---s~rilhrd~k 127 (808)
T KOG0597|consen 82 YAVG-DLFTILEQ------------------------------DGKLPEEQVRAIAYDLVSALYYLH---SNRILHRDMK 127 (808)
T ss_pred hhhh-hHHHHHHh------------------------------ccCCCHHHHHHHHHHHHHHHHHHH---hcCcccccCC
Confidence 9988 99999975 445777888999999999999999 8999999999
Q ss_pred CCceEEcCCCCeeecccccceecCCCC-ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCC
Q 003504 665 ASSVYLDMNLEPRLSDFGLAKIFGNGL-DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYP 743 (815)
Q Consensus 665 ~~NIll~~~~~~kl~Dfgla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~ 743 (815)
|.|||++..|.+|++|||+|+.+.... ......||+-|||||+..+.. |+..+|.||+||++||+++|++||.
T Consensus 128 PqniLl~~~~~~KlcdFg~Ar~m~~~t~vltsikGtPlYmAPElv~e~p--yd~~sDlWslGcilYE~~~G~PPF~---- 201 (808)
T KOG0597|consen 128 PQNILLEKGGTLKLCDFGLARAMSTNTSVLTSIKGTPLYMAPELVEEQP--YDHTSDLWSLGCILYELYVGQPPFY---- 201 (808)
T ss_pred cceeeecCCCceeechhhhhhhcccCceeeeeccCcccccCHHHHcCCC--ccchhhHHHHHHHHHHHhcCCCCch----
Confidence 999999999999999999999887543 334456999999999998766 7999999999999999999999997
Q ss_pred ccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 744 EEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 744 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
...+...++.+..+. .. .|......+..++...+.+||.+|.+..+++.
T Consensus 202 ---a~si~~Lv~~I~~d~--------v~---~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 202 ---ARSITQLVKSILKDP--------VK---PPSTASSSFVNFLQGLLIKDPAQRLTWTDLLG 250 (808)
T ss_pred ---HHHHHHHHHHHhcCC--------CC---CcccccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence 345556666555431 11 24466778899999999999999999998864
No 40
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-39 Score=315.10 Aligned_cols=236 Identities=27% Similarity=0.318 Sum_probs=199.1
Q ss_pred cCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCcccHH---HHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEE
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGSTLTDQ---EAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIY 583 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~---~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 583 (815)
++|+..+.+|.|+||.|..++. .+|..+|+|++.+......+ ...+|..+|+.+.||.++++++.+.+....++||
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm 123 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM 123 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence 4688899999999999999995 56889999999876554443 3567999999999999999999999999999999
Q ss_pred EeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccC
Q 003504 584 DYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDI 663 (815)
Q Consensus 584 ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDl 663 (815)
||+++|.|.++|+.. ..++.....-+|.+|+.||+||| +..|++|||
T Consensus 124 eyv~GGElFS~Lrk~------------------------------~rF~e~~arFYAAeivlAleylH---~~~iiYRDL 170 (355)
T KOG0616|consen 124 EYVPGGELFSYLRKS------------------------------GRFSEPHARFYAAEIVLALEYLH---SLDIIYRDL 170 (355)
T ss_pred eccCCccHHHHHHhc------------------------------CCCCchhHHHHHHHHHHHHHHHH---hcCeeeccC
Confidence 999999999999863 24556667779999999999999 899999999
Q ss_pred CCCceEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCC
Q 003504 664 KASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYP 743 (815)
Q Consensus 664 k~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~ 743 (815)
||+|||+|.+|.+||+|||+|+.+.. ...+.|||+.|+|||++.... +..++|.|||||++|||+.|.+||.+..+
T Consensus 171 KPENiLlD~~G~iKitDFGFAK~v~~--rT~TlCGTPeYLAPEii~sk~--ynkavDWWalGVLIYEMlaG~pPF~~~~~ 246 (355)
T KOG0616|consen 171 KPENLLLDQNGHIKITDFGFAKRVSG--RTWTLCGTPEYLAPEIIQSKG--YNKAVDWWALGVLIYEMLAGYPPFYDDNP 246 (355)
T ss_pred ChHHeeeccCCcEEEEeccceEEecC--cEEEecCCccccChHHhhcCC--CCcchhHHHHHHHHHHHHcCCCCCcCCCh
Confidence 99999999999999999999998864 366789999999999999887 78899999999999999999999987655
Q ss_pred ccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCC
Q 003504 744 EEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKR 798 (815)
Q Consensus 744 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~R 798 (815)
-..+.++. .. . ...|.....++.+|+...++.|-.+|
T Consensus 247 ~~iY~KI~-------~~---------~--v~fP~~fs~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 247 IQIYEKIL-------EG---------K--VKFPSYFSSDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred HHHHHHHH-------hC---------c--ccCCcccCHHHHHHHHHHHhhhhHhh
Confidence 33322222 11 1 12345556678888999999998888
No 41
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=5.6e-39 Score=336.45 Aligned_cols=253 Identities=22% Similarity=0.344 Sum_probs=203.0
Q ss_pred cCCCCCCeecccCCeeeEEEEcC----CCcEEEEEEeecCCc-ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEE
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFLP----GGIHVAVKVLVHGST-LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAI 582 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv 582 (815)
.+|++.+.||+|+||.||+|++. .+..||+|.++.... .....+.+|+.++.+++||||++++|++..++..++|
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 84 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIV 84 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEE
Confidence 46788899999999999999853 356899999876432 2345788999999999999999999999999999999
Q ss_pred EEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecc
Q 003504 583 YDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRD 662 (815)
Q Consensus 583 ~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrD 662 (815)
|||+++|+|.+++... ...++|..++.++.|++.||+||| +.+++|||
T Consensus 85 ~e~~~~~~L~~~l~~~-----------------------------~~~l~~~~~~~~~~~i~~al~~lH---~~~iiH~d 132 (266)
T cd05064 85 TEYMSNGALDSFLRKH-----------------------------EGQLVAGQLMGMLPGLASGMKYLS---EMGYVHKG 132 (266)
T ss_pred EEeCCCCcHHHHHHhC-----------------------------CCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecc
Confidence 9999999999999652 235789999999999999999999 88999999
Q ss_pred CCCCceEEcCCCCeeecccccceecCCCCc--cccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CCCCCC
Q 003504 663 IKASSVYLDMNLEPRLSDFGLAKIFGNGLD--EEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GKKPLG 739 (815)
Q Consensus 663 lk~~NIll~~~~~~kl~Dfgla~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~ 739 (815)
|||+||+++.++.+|++|||.+........ .....++..|+|||.+.+.. ++.++|||||||++||+++ |+.||.
T Consensus 133 ikp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~Di~slG~~l~ell~~g~~p~~ 210 (266)
T cd05064 133 LAAHKVLVNSDLVCKISGFRRLQEDKSEAIYTTMSGKSPVLWAAPEAIQYHH--FSSASDVWSFGIVMWEVMSYGERPYW 210 (266)
T ss_pred ccHhhEEEcCCCcEEECCCcccccccccchhcccCCCCceeecCHHHHhhCC--ccchhHHHHHHHHHHHHhcCCCCCcC
Confidence 999999999999999999998765432211 11223567899999987665 7889999999999999876 999997
Q ss_pred CCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhh
Q 003504 740 DDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDI 811 (815)
Q Consensus 740 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 811 (815)
.....+ + ... .... .....+..++..+.+++.+||+.+|++||+++++.+.|+++
T Consensus 211 ~~~~~~----~---~~~-~~~~---------~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 211 DMSGQD----V---IKA-VEDG---------FRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred cCCHHH----H---HHH-HHCC---------CCCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 532211 1 111 1111 01112344667899999999999999999999999998764
No 42
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-40 Score=335.98 Aligned_cols=247 Identities=23% Similarity=0.358 Sum_probs=203.4
Q ss_pred CCCCCCeecccCCeeeEEEE-cCCCcEEEEEEeecC-CcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeC
Q 003504 509 NFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHG-STLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYM 586 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 586 (815)
.|...+.||+|.||.||||. ...++.||+|++.-. ....-+++.+|+.++.+++++||.+++|.+..+...+++||||
T Consensus 14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~ 93 (467)
T KOG0201|consen 14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYC 93 (467)
T ss_pred ccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHh
Confidence 46667899999999999999 467889999999754 3334568899999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCC
Q 003504 587 ENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKAS 666 (815)
Q Consensus 587 ~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~ 666 (815)
.+|++.+.|...+ .++.....-|++++..||.||| ..+.+|||||+.
T Consensus 94 ~gGsv~~lL~~~~------------------------------~~~E~~i~~ilre~l~~l~ylH---~~~kiHrDIKaa 140 (467)
T KOG0201|consen 94 GGGSVLDLLKSGN------------------------------ILDEFEIAVILREVLKGLDYLH---SEKKIHRDIKAA 140 (467)
T ss_pred cCcchhhhhccCC------------------------------CCccceeeeehHHHHHHhhhhh---hcceeccccccc
Confidence 9999999997532 2233334457889999999999 889999999999
Q ss_pred ceEEcCCCCeeecccccceecCCCC-ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCcc
Q 003504 667 SVYLDMNLEPRLSDFGLAKIFGNGL-DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEE 745 (815)
Q Consensus 667 NIll~~~~~~kl~Dfgla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~ 745 (815)
|||+..+|.+|++|||++..+.... .....+||+.|||||++.+.. |+.|+||||+|++.+||.+|.+|+....|..
T Consensus 141 nil~s~~g~vkl~DfgVa~ql~~~~~rr~tfvGTPfwMAPEVI~~~~--Y~~KADIWSLGITaiEla~GePP~s~~hPmr 218 (467)
T KOG0201|consen 141 NILLSESGDVKLADFGVAGQLTNTVKRRKTFVGTPFWMAPEVIKQSG--YDTKADIWSLGITAIELAKGEPPHSKLHPMR 218 (467)
T ss_pred ceeEeccCcEEEEecceeeeeechhhccccccccccccchhhhcccc--ccchhhhhhhhHHHHHHhcCCCCCcccCcce
Confidence 9999999999999999998876544 336788999999999999655 8999999999999999999999998755522
Q ss_pred ccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003504 746 KEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGL 807 (815)
Q Consensus 746 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~ 807 (815)
..-.+ ..-..|.+. ..+...+.+++..|+.++|+.||++.++++.
T Consensus 219 vlflI-------------pk~~PP~L~----~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 219 VLFLI-------------PKSAPPRLD----GDFSPPFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred EEEec-------------cCCCCCccc----cccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 21110 111233332 3566779999999999999999999999863
No 43
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=8.7e-39 Score=351.12 Aligned_cols=284 Identities=26% Similarity=0.352 Sum_probs=206.4
Q ss_pred hcCCCCCCeecccCCeeeEEEEc------CCCcEEEEEEeecCC-cccHHHHHHHHHHhcCC-CCCCceeeeeEEEeCCe
Q 003504 507 TSNFDRGTLLAEGKFGPVYRGFL------PGGIHVAVKVLVHGS-TLTDQEAARELEYLGRI-KHPNLVPLTGYCIAGDQ 578 (815)
Q Consensus 507 ~~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~ 578 (815)
.++|++++.||+|+||.||+|+. .++..||||+++... ....+.+.+|++++..+ +||||++++|+|...+.
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~ 113 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGP 113 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCc
Confidence 45788899999999999999973 345689999986532 23345788999999999 89999999999999999
Q ss_pred eEEEEEeCCCCChhhhhccCCCCCcc---c-----------------cCCCCCccc-----------cC-----------
Q 003504 579 RIAIYDYMENGNLQNLLHDLPLGVQT---T-----------------EDWSTDTWE-----------ED----------- 616 (815)
Q Consensus 579 ~~lv~ey~~~gsL~~~l~~~~~~~~~---~-----------------~~~~~~~~~-----------~~----------- 616 (815)
.++||||+++|+|.++++........ . .......+. ..
T Consensus 114 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (375)
T cd05104 114 TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGS 193 (375)
T ss_pred ceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccce
Confidence 99999999999999999754211000 0 000000000 00
Q ss_pred ---CCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCceEEcCCCCeeecccccceecCCCCcc
Q 003504 617 ---GTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDE 693 (815)
Q Consensus 617 ---~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~ 693 (815)
..............++|..+.+++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++........
T Consensus 194 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 270 (375)
T cd05104 194 YIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNY 270 (375)
T ss_pred ecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCchhhEEEECCCcEEEecCccceeccCcccc
Confidence 00000000112346889999999999999999999 889999999999999999999999999999876543211
Q ss_pred ---ccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCCccccccHHHHHHHHHhcCCCCccccc
Q 003504 694 ---EIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDP 769 (815)
Q Consensus 694 ---~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 769 (815)
....++..|+|||.+.+.. ++.++|||||||++|||++ |..||...... .....+ +....
T Consensus 271 ~~~~~~~~~~~y~aPE~~~~~~--~~~~sDi~slG~~l~ellt~g~~p~~~~~~~---~~~~~~----~~~~~------- 334 (375)
T cd05104 271 VVKGNARLPVKWMAPESIFNCV--YTFESDVWSYGILLWEIFSLGSSPYPGMPVD---SKFYKM----IKEGY------- 334 (375)
T ss_pred cccCCCCCCcceeChhHhcCCC--CCCCCCHHHHHHHHHHHHhcCCCCCCCCCch---HHHHHH----HHhCc-------
Confidence 1223456799999987665 7899999999999999998 88898653211 111211 11111
Q ss_pred cccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhh
Q 003504 770 KIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDI 811 (815)
Q Consensus 770 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 811 (815)
....+...+.++.+++.+||+.||++||+|.+|++.|++.
T Consensus 335 --~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 335 --RMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred --cCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 1111222356789999999999999999999999999863
No 44
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=1e-38 Score=332.49 Aligned_cols=249 Identities=24% Similarity=0.391 Sum_probs=202.2
Q ss_pred cCCCCCCeecccCCeeeEEEEcCCCcEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeCC
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYME 587 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 587 (815)
++|++.+.||+|+||.||+|.+.++..+|+|.+... ......+.+|++++++++||||+++++++...+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~ 82 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEG-AMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME 82 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccC-CccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence 457778999999999999999988889999988643 3446788999999999999999999999999999999999999
Q ss_pred CCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCc
Q 003504 588 NGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASS 667 (815)
Q Consensus 588 ~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~N 667 (815)
+|+|.++++.. ...++|..+..++.|++.||+||| +.+++||||||+|
T Consensus 83 ~~~L~~~~~~~-----------------------------~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~n 130 (256)
T cd05114 83 NGCLLNYLRQR-----------------------------QGKLSKDMLLSMCQDVCEGMEYLE---RNSFIHRDLAARN 130 (256)
T ss_pred CCcHHHHHHhC-----------------------------ccCCCHHHHHHHHHHHHHHHHHHH---HCCccccccCcce
Confidence 99999998752 124788999999999999999999 8899999999999
Q ss_pred eEEcCCCCeeecccccceecCCCCc--cccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCCc
Q 003504 668 VYLDMNLEPRLSDFGLAKIFGNGLD--EEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GKKPLGDDYPE 744 (815)
Q Consensus 668 Ill~~~~~~kl~Dfgla~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~ 744 (815)
|++++++.+||+|||.++....... .....++..|+|||.+.+.. ++.++||||||+++||+++ |+.||.....
T Consensus 131 i~i~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~Di~s~G~~l~el~~~g~~p~~~~~~- 207 (256)
T cd05114 131 CLVSSTGVVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNFSK--YSSKSDVWSFGVLMWEVFTEGKMPFEKKSN- 207 (256)
T ss_pred EEEcCCCeEEECCCCCccccCCCceeccCCCCCchhhCChhhcccCc--cchhhhhHHHHHHHHHHHcCCCCCCCCCCH-
Confidence 9999999999999999986543221 12223566899999987655 6889999999999999999 8999875322
Q ss_pred cccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 003504 745 EKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLL 808 (815)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L 808 (815)
...+....... .... +...+.++.+++.+||+.+|++||+|+++++.|
T Consensus 208 ------~~~~~~i~~~~---~~~~-------~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 208 ------YEVVEMISRGF---RLYR-------PKLASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred ------HHHHHHHHCCC---CCCC-------CCCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 11122221111 1111 222345789999999999999999999999887
No 45
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=4e-38 Score=388.97 Aligned_cols=348 Identities=32% Similarity=0.522 Sum_probs=256.8
Q ss_pred CCeEEEEecCCCCCccCCCcccccCCCCCCEEECcCCCCC-CCCcccCCCCCCCEEEccCCcCCccCCccccCCCCCcEE
Q 003504 27 KQHVTDFLASNSGLSGSVPDTTIGKLSKLQSLDLSENNIT-ALPSDLWSLGSLKSLNLSYNRISGSLPSNIGNFGLLEVF 105 (815)
Q Consensus 27 ~~~~~~l~~~~~~~~g~~~~~~~~~l~~L~~L~Ls~n~l~-~lp~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L 105 (815)
..+++.|++++|++.|.+|. .++.+++|++|+|++|+++ .+|..+..+++|++|+|++|.+.+.+|..|.++++|+.|
T Consensus 235 l~~L~~L~L~~n~l~~~~p~-~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L 313 (968)
T PLN00113 235 LTSLNHLDLVYNNLTGPIPS-SLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEIL 313 (968)
T ss_pred CCCCCEEECcCceeccccCh-hHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEE
Confidence 34566777777777766665 5777777777777777765 456666667777777777777777777777777777777
Q ss_pred EccCCcCCCCChhhhcCCcCCCEEEcCCCcccccCCcccccccccceeeccCCcCCCCCCchhh----------------
Q 003504 106 DLSNNNFSGEIPAAISSLVSLRVLKLDGNMFQWSIPPGLLNCQSLVTVDLSMNQLNGSLPDGFG---------------- 169 (815)
Q Consensus 106 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~lp~~~~---------------- 169 (815)
+|++|.+++..|..+.++++|+.|+|++|.+++.+|..+..+++|+.|+|++|++++.+|..+.
T Consensus 314 ~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~ 393 (968)
T PLN00113 314 HLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLE 393 (968)
T ss_pred ECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEec
Confidence 7777777766677777777777777777777666666666666666666666666655554432
Q ss_pred -------ccCCCCCEEEcCCCcccC-CCCCCCCCCCCCeEeccCCcCCCcchhhh--hcccceeeeccccccCccccccc
Q 003504 170 -------AAFPKLKSLNLAGNEIKG-RDTHFAGLKSITNLNISGNLFQGSVMGVF--LESLEVIDLRSNQFQGHISQVQF 239 (815)
Q Consensus 170 -------~~l~~L~~L~L~~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~--l~~L~~L~L~~N~l~~~~~~~~~ 239 (815)
..+++|+.|+|++|++++ .+..|..+++|+.|+|++|.+++..+..+ +++|+.|+|++|++.+.++..
T Consensus 394 ~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~-- 471 (968)
T PLN00113 394 GEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDS-- 471 (968)
T ss_pred ccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCcc--
Confidence 234555666666665553 34456666666666666666665544433 566777777777666544432
Q ss_pred ccccCCccceEEEcCCCccCcchhhccccCCCCCEEEecCCcCcCCCccccccccCCCeEecCCCcCcCCCchhhhcCCC
Q 003504 240 NSSYNWSRLVYVDLSENQLSGEIFHNFSQAQNLKHLSLAYNRFTRQEFPQIGTLLGLEHLNLSRTSLIGDIPSEILQLSS 319 (815)
Q Consensus 240 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 319 (815)
...++|+.|++++|++.+..|..+..+++|++|+|++|++++..+..+..+++|+.|+|++|.+++.+|..+..+++
T Consensus 472 ---~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 548 (968)
T PLN00113 472 ---FGSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPV 548 (968)
T ss_pred ---cccccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCccc
Confidence 24578999999999999999999999999999999999998888889999999999999999999999999999999
Q ss_pred CCEEeCCCCcCCCCCCcc--CCCCccEEEccCCcCcccCChHHhhcCCCCceeeccCCCCcccCCC
Q 003504 320 LHTLDLSMNHLTGQIPTV--SAKNLGIIDMSHNNLSGEIPASLLEKLPQMERFNFSYNNLTLCASE 383 (815)
Q Consensus 320 L~~L~ls~N~l~~~~~~~--~~~~L~~L~ls~N~l~~~~p~~~~~~l~~l~~l~l~~N~l~~~~~~ 383 (815)
|+.|+|++|++++.+|.. .+.+|+.|++++|+++|.+|.. ..+..+....+.+|+. .|+..
T Consensus 549 L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~--~~~~~~~~~~~~~n~~-lc~~~ 611 (968)
T PLN00113 549 LSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPST--GAFLAINASAVAGNID-LCGGD 611 (968)
T ss_pred CCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCCCc--chhcccChhhhcCCcc-ccCCc
Confidence 999999999999988875 6789999999999999999953 2334455556677763 46543
No 46
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=1.1e-39 Score=340.24 Aligned_cols=246 Identities=32% Similarity=0.498 Sum_probs=192.8
Q ss_pred CCeecccCCeeeEEEEcC-----CCcEEEEEEeecCCc-ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeC
Q 003504 513 GTLLAEGKFGPVYRGFLP-----GGIHVAVKVLVHGST-LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYM 586 (815)
Q Consensus 513 ~~~ig~G~~g~Vy~~~~~-----~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 586 (815)
.+.||.|+||.||+|.+. .+..|+||.+..... ...+.+.+|++.+++++||||++++|+|...+..++|+||+
T Consensus 4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~ 83 (259)
T PF07714_consen 4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEYC 83 (259)
T ss_dssp EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--
T ss_pred eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccccc
Confidence 468999999999999976 357899999965322 23678999999999999999999999999888899999999
Q ss_pred CCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCC
Q 003504 587 ENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKAS 666 (815)
Q Consensus 587 ~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~ 666 (815)
++|+|.++|+.. ....+++..+.+|+.|+|+||+||| +.+++||||+++
T Consensus 84 ~~g~L~~~L~~~----------------------------~~~~~~~~~~~~i~~~i~~~l~~Lh---~~~iiH~~l~~~ 132 (259)
T PF07714_consen 84 PGGSLDDYLKSK----------------------------NKEPLSEQQRLSIAIQIAEALSYLH---SNNIIHGNLSPS 132 (259)
T ss_dssp TTEBHHHHHHHT----------------------------CTTTSBHHHHHHHHHHHHHHHHHHH---HTTEEEST-SGG
T ss_pred cccccccccccc----------------------------ccccccccccccccccccccccccc---cccccccccccc
Confidence 999999999863 2456899999999999999999999 789999999999
Q ss_pred ceEEcCCCCeeecccccceecCCCC---ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCC
Q 003504 667 SVYLDMNLEPRLSDFGLAKIFGNGL---DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GKKPLGDDY 742 (815)
Q Consensus 667 NIll~~~~~~kl~Dfgla~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~ 742 (815)
||+++.++.+||+|||+++...... ......+...|+|||.+.... ++.++||||||+++||+++ |+.||.+..
T Consensus 133 nill~~~~~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~--~~~ksDVysfG~~l~ei~~~~~~p~~~~~ 210 (259)
T PF07714_consen 133 NILLDSNGQVKLSDFGLSRPISEKSKYKNDSSQQLPLRYLAPEVLKDGE--YTKKSDVYSFGMLLYEILTLGKFPFSDYD 210 (259)
T ss_dssp GEEEETTTEEEEESTTTGEETTTSSSEEESTTSESGGGGS-HHHHHHSE--ESHHHHHHHHHHHHHHHHTTSSGTTTTSC
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccccccc
Confidence 9999999999999999998773222 122334677899999987766 6999999999999999999 788886432
Q ss_pred CccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 003504 743 PEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLL 808 (815)
Q Consensus 743 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L 808 (815)
. ........ .. .+...+..++..+.+++..||+.+|++||+|+++++.|
T Consensus 211 ~-------~~~~~~~~-~~---------~~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 211 N-------EEIIEKLK-QG---------QRLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp H-------HHHHHHHH-TT---------EETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred c-------cccccccc-cc---------ccceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 1 12222221 11 11112334567789999999999999999999999886
No 47
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=1.5e-38 Score=332.37 Aligned_cols=253 Identities=27% Similarity=0.387 Sum_probs=205.7
Q ss_pred cCCCCCCeecccCCeeeEEEEcCCCcEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeCC
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYME 587 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 587 (815)
++|++.+.||+|+||.||+|...++..||+|.+... ....+.+.+|+.++++++||||+++++++...+..++||||++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 84 (261)
T cd05072 6 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPG-TMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMA 84 (261)
T ss_pred HHeEEeeecCCcCCceEEEEEecCCceEEEEEccCC-chhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCC
Confidence 468888999999999999999888889999987653 3345788999999999999999999999999999999999999
Q ss_pred CCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCc
Q 003504 588 NGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASS 667 (815)
Q Consensus 588 ~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~N 667 (815)
+|+|.++++.. .....++..+..++.|++.||+||| +.+++||||||+|
T Consensus 85 ~~~L~~~l~~~----------------------------~~~~~~~~~~~~~~~~l~~~l~~LH---~~~i~H~dl~p~n 133 (261)
T cd05072 85 KGSLLDFLKSD----------------------------EGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHRDLRAAN 133 (261)
T ss_pred CCcHHHHHHHh----------------------------cCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhh
Confidence 99999999752 1335788889999999999999999 7899999999999
Q ss_pred eEEcCCCCeeecccccceecCCCCc--cccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCCc
Q 003504 668 VYLDMNLEPRLSDFGLAKIFGNGLD--EEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GKKPLGDDYPE 744 (815)
Q Consensus 668 Ill~~~~~~kl~Dfgla~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~ 744 (815)
|+++.++.+||+|||+++....... .....++..|+|||++.... ++.++|||||||++|||++ |+.||......
T Consensus 134 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~ 211 (261)
T cd05072 134 VLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGS--FTIKSDVWSFGILLYEIVTYGKIPYPGMSNS 211 (261)
T ss_pred EEecCCCcEEECCCccceecCCCceeccCCCccceecCCHHHhccCC--CChhhhhhhhHHHHHHHHccCCCCCCCCCHH
Confidence 9999999999999999987654321 12233567899999987655 6889999999999999998 99998653221
Q ss_pred cccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhh
Q 003504 745 EKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDI 811 (815)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 811 (815)
.....+ .... ........+.++.+++.+||..+|++||+++++.+.|+++
T Consensus 212 ----~~~~~~----~~~~---------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 212 ----DVMSAL----QRGY---------RMPRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred ----HHHHHH----HcCC---------CCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 112111 1110 0111223456789999999999999999999999999864
No 48
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=1e-38 Score=350.12 Aligned_cols=285 Identities=25% Similarity=0.329 Sum_probs=206.6
Q ss_pred hcCCCCCCeecccCCeeeEEEEc------CCCcEEEEEEeecCCcc-cHHHHHHHHHHhcCC-CCCCceeeeeEEEeCCe
Q 003504 507 TSNFDRGTLLAEGKFGPVYRGFL------PGGIHVAVKVLVHGSTL-TDQEAARELEYLGRI-KHPNLVPLTGYCIAGDQ 578 (815)
Q Consensus 507 ~~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~ 578 (815)
.++|++.+.||+|+||.||+|+. .++..||||++...... ....+.+|+++++.+ +||||++++|+|.....
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~ 116 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGP 116 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCC
Confidence 45788899999999999999873 23457999999754322 345688999999999 89999999999999999
Q ss_pred eEEEEEeCCCCChhhhhccCCCCCccccC-----------------------------------CCCCccccCC-----C
Q 003504 579 RIAIYDYMENGNLQNLLHDLPLGVQTTED-----------------------------------WSTDTWEEDG-----T 618 (815)
Q Consensus 579 ~~lv~ey~~~gsL~~~l~~~~~~~~~~~~-----------------------------------~~~~~~~~~~-----~ 618 (815)
.++||||+++|+|.++++........... +..-...... .
T Consensus 117 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (374)
T cd05106 117 VLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSD 196 (374)
T ss_pred eEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccccc
Confidence 99999999999999999753211000000 0000000000 0
Q ss_pred ccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCceEEcCCCCeeecccccceecCCCCcc---cc
Q 003504 619 NSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDE---EI 695 (815)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~---~~ 695 (815)
............+++....+++.|++.||+||| +.+|+||||||+|||+++++.+||+|||+++........ ..
T Consensus 197 ~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH---~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~ 273 (374)
T cd05106 197 SKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLA---SKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGN 273 (374)
T ss_pred ccchhccCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccC
Confidence 000000112346889999999999999999999 899999999999999999999999999999876433221 12
Q ss_pred ccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCC
Q 003504 696 ARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDT 774 (815)
Q Consensus 696 ~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 774 (815)
..++..|+|||++.... ++.++|||||||++|||++ |+.||....... ... ...... ....
T Consensus 274 ~~~~~~y~aPE~~~~~~--~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~---~~~----~~~~~~---------~~~~ 335 (374)
T cd05106 274 ARLPVKWMAPESIFDCV--YTVQSDVWSYGILLWEIFSLGKSPYPGILVNS---KFY----KMVKRG---------YQMS 335 (374)
T ss_pred CCCccceeCHHHhcCCC--CCccccHHHHHHHHHHHHhCCCCCCccccccH---HHH----HHHHcc---------cCcc
Confidence 23456899999987655 7899999999999999997 999997532211 111 111111 1111
Q ss_pred CCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhhh
Q 003504 775 GPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDIE 812 (815)
Q Consensus 775 ~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~ 812 (815)
.+...+.++.+++.+||+.||++||++.+|++.|+++.
T Consensus 336 ~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 336 RPDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 12223567899999999999999999999999999864
No 49
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.5e-39 Score=326.28 Aligned_cols=259 Identities=24% Similarity=0.317 Sum_probs=198.1
Q ss_pred CCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCe-----eEEEE
Q 003504 510 FDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQ-----RIAIY 583 (815)
Q Consensus 510 ~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~-----~~lv~ 583 (815)
|...+++|+|+||.||+|+. .++..||||+...+.. .-.+|+++|++++|||||++..++....+ ..+||
T Consensus 26 ~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r----~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVl 101 (364)
T KOG0658|consen 26 YEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR----YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVL 101 (364)
T ss_pred EEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC----cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHH
Confidence 45578999999999999995 4578999998754322 23479999999999999999998876432 24799
Q ss_pred EeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccC
Q 003504 584 DYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDI 663 (815)
Q Consensus 584 ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDl 663 (815)
||||. +|.++++..- ..+..++.....-+..|+.+||+||| +.+|+||||
T Consensus 102 eymP~-tL~~~~r~~~--------------------------~~~~~mp~~~iKLYt~Qlfrgl~yLh---~~~IcHRDI 151 (364)
T KOG0658|consen 102 EYMPE-TLYRVIRHYT--------------------------RANQRMPLLEIKLYTYQLFRGLAYLH---SHGICHRDI 151 (364)
T ss_pred HhchH-HHHHHHHHHh--------------------------hcCCCCceeeeHHHHHHHHHHHHHHH---hcCcccCCC
Confidence 99999 9999997421 11223344445668899999999999 899999999
Q ss_pred CCCceEEcCC-CCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCC
Q 003504 664 KASSVYLDMN-LEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDY 742 (815)
Q Consensus 664 k~~NIll~~~-~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~ 742 (815)
||.|+|+|.+ |.+||||||.|+....+........|..|+|||.+.+... |+.+.||||.|||+.||+-|++-|.++.
T Consensus 152 KPqNlLvD~~tg~LKicDFGSAK~L~~~epniSYicSRyYRaPELifga~~-Yt~~IDiWSaGCV~aELl~g~plFpG~s 230 (364)
T KOG0658|consen 152 KPQNLLVDPDTGVLKICDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE-YTTSIDIWSAGCVMAELLKGQPLFPGDS 230 (364)
T ss_pred ChheEEEcCCCCeEEeccCCcceeeccCCCceeEEEeccccCHHHHcCccc-cCceeEEhhhhHHHHHHhcCCcccCCCC
Confidence 9999999966 9999999999999988777777778999999999998876 7999999999999999999999998743
Q ss_pred CccccccHHHHHHH-------HHhcCCC--CccccccccCC-----CCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 743 PEEKEGNLVSWVRG-------LVRNNKG--SRAIDPKIRDT-----GPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 743 ~~~~~~~~~~~~~~-------~~~~~~~--~~~~~~~~~~~-----~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
.. .++...++. .+..... .+...|.+... .....+.+..+++.+++..+|.+|.++.|++.
T Consensus 231 ~~---dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~ 305 (364)
T KOG0658|consen 231 SV---DQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALA 305 (364)
T ss_pred HH---HHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhc
Confidence 32 222222221 1111111 11112222211 23345678999999999999999999999874
No 50
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-38 Score=326.87 Aligned_cols=253 Identities=22% Similarity=0.309 Sum_probs=200.5
Q ss_pred HHhcCCCCCCeecccCCeeeEEEE-cCCCcEEEEEEeecCCc--------------ccHHHHHHHHHHhcCCCCCCceee
Q 003504 505 SATSNFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHGST--------------LTDQEAARELEYLGRIKHPNLVPL 569 (815)
Q Consensus 505 ~~~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~l~~~~~--------------~~~~~~~~E~~~l~~l~H~niv~l 569 (815)
...+.|++.+.||+|.||.|-+|+ ..+++.||||++.+... ...+...+||.+|++++|||||+|
T Consensus 94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L 173 (576)
T KOG0585|consen 94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL 173 (576)
T ss_pred eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence 345689999999999999999999 46789999999964211 112467899999999999999999
Q ss_pred eeEEEeC--CeeEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcc-cCHHHHHHHHHHHHHH
Q 003504 570 TGYCIAG--DQRIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLL-TTWRFRHKIALGTARA 646 (815)
Q Consensus 570 ~g~~~~~--~~~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~ia~~ 646 (815)
+.+..+. +..|||+|||..|.+...= .+.+ ++..+..+++.++..|
T Consensus 174 iEvLDDP~s~~~YlVley~s~G~v~w~p-------------------------------~d~~els~~~Ar~ylrDvv~G 222 (576)
T KOG0585|consen 174 IEVLDDPESDKLYLVLEYCSKGEVKWCP-------------------------------PDKPELSEQQARKYLRDVVLG 222 (576)
T ss_pred EEeecCcccCceEEEEEeccCCccccCC-------------------------------CCcccccHHHHHHHHHHHHHH
Confidence 9998774 5789999999998764322 1223 7888889999999999
Q ss_pred HHHHhcCCCCCeeeccCCCCceEEcCCCCeeecccccceecCCCC------ccccccccccccCCcccCCCC--CCCCCc
Q 003504 647 LAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGL------DEEIARGSPGYIPPEFAQPDS--DFPTPK 718 (815)
Q Consensus 647 L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~------~~~~~~gt~~y~aPE~~~~~~--~~~~~~ 718 (815)
|+||| .++||||||||+|+|++++|++||+|||.+.....+. ......||+.|+|||...++. .+.+.+
T Consensus 223 LEYLH---~QgiiHRDIKPsNLLl~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a 299 (576)
T KOG0585|consen 223 LEYLH---YQGIIHRDIKPSNLLLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFA 299 (576)
T ss_pred HHHHH---hcCeeccccchhheEEcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchh
Confidence 99999 8999999999999999999999999999998774332 223467999999999988743 235788
Q ss_pred CcchhHHHHHHHHHhCCCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCC
Q 003504 719 SDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKR 798 (815)
Q Consensus 719 ~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~R 798 (815)
.||||+||+||-++.|+.||.+++..+.. .++.. ..+.....++..+++.+++.+++.+||++|
T Consensus 300 ~DiWalGVTLYCllfG~~PF~~~~~~~l~-------~KIvn---------~pL~fP~~pe~~e~~kDli~~lL~KdP~~R 363 (576)
T KOG0585|consen 300 LDIWALGVTLYCLLFGQLPFFDDFELELF-------DKIVN---------DPLEFPENPEINEDLKDLIKRLLEKDPEQR 363 (576)
T ss_pred hhhhhhhhhHHHhhhccCCcccchHHHHH-------HHHhc---------CcccCCCcccccHHHHHHHHHHhhcChhhe
Confidence 99999999999999999999864432222 22221 122222223567789999999999999999
Q ss_pred CCHHHHHHH
Q 003504 799 PSMQQIVGL 807 (815)
Q Consensus 799 Ps~~~v~~~ 807 (815)
.+..+|...
T Consensus 364 i~l~~ik~H 372 (576)
T KOG0585|consen 364 ITLPDIKLH 372 (576)
T ss_pred eehhhheec
Confidence 999988643
No 51
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=1.3e-38 Score=332.83 Aligned_cols=256 Identities=28% Similarity=0.441 Sum_probs=210.4
Q ss_pred HhcCCCCCCeecccCCeeeEEEEcCCCcEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEe
Q 003504 506 ATSNFDRGTLLAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDY 585 (815)
Q Consensus 506 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 585 (815)
+..+|++.+.||.|+||.||+|...++..||+|.+..........+.+|+.+++.++||||+++++++...+..++||||
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 83 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITEL 83 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEee
Confidence 44578889999999999999999888999999999775555567899999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCC
Q 003504 586 MENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKA 665 (815)
Q Consensus 586 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~ 665 (815)
+++|+|.++++.. ....+++..+..++.|++.||+||| +.+++||||||
T Consensus 84 ~~~~~L~~~~~~~----------------------------~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~h~dl~~ 132 (261)
T cd05148 84 MEKGSLLAFLRSP----------------------------EGQVLPVASLIDMACQVAEGMAYLE---EQNSIHRDLAA 132 (261)
T ss_pred cccCCHHHHHhcC----------------------------CCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccCc
Confidence 9999999999752 2345789999999999999999999 88999999999
Q ss_pred CceEEcCCCCeeecccccceecCCCCc-cccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCC
Q 003504 666 SSVYLDMNLEPRLSDFGLAKIFGNGLD-EEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GKKPLGDDYP 743 (815)
Q Consensus 666 ~NIll~~~~~~kl~Dfgla~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~ 743 (815)
+||+++.++.+||+|||.+........ .....++..|+|||.+.... ++.++||||||+++||+++ |+.||.....
T Consensus 133 ~nilv~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~--~~~~~DiwslG~~l~~l~~~g~~p~~~~~~ 210 (261)
T cd05148 133 RNILVGEDLVCKVADFGLARLIKEDVYLSSDKKIPYKWTAPEAASHGT--FSTKSDVWSFGILLYEMFTYGQVPYPGMNN 210 (261)
T ss_pred ceEEEcCCceEEEccccchhhcCCccccccCCCCceEecCHHHHccCC--CCchhhHHHHHHHHHHHHcCCCCCCCcCCH
Confidence 999999999999999999987643321 12233567899999887655 6889999999999999998 8999865321
Q ss_pred ccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhh
Q 003504 744 EEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDI 811 (815)
Q Consensus 744 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 811 (815)
. ..... ... ......+..++.++.+++.+||+.||++||+++++++.|+.+
T Consensus 211 ~----~~~~~---~~~----------~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 211 H----EVYDQ---ITA----------GYRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred H----HHHHH---HHh----------CCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 1 11111 111 111112344567889999999999999999999999999864
No 52
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=3.4e-38 Score=330.00 Aligned_cols=253 Identities=26% Similarity=0.356 Sum_probs=205.0
Q ss_pred cCCCCCCeecccCCeeeEEEEcC-CCcEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeC
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFLP-GGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYM 586 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 586 (815)
.+|++.+.||+|+||.||+|... .+..||+|.+... ......+.+|++++++++||||+++++++...+..++||||+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 84 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeC
Confidence 35777889999999999999954 5888999998653 334567899999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCC
Q 003504 587 ENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKAS 666 (815)
Q Consensus 587 ~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~ 666 (815)
++|+|.+++... ....+++..+..++.|+++||+||| +.+++||||||+
T Consensus 85 ~~~~L~~~~~~~----------------------------~~~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~ 133 (263)
T cd05052 85 TYGNLLDYLREC----------------------------NRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAAR 133 (263)
T ss_pred CCCcHHHHHHhC----------------------------CCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccCcc
Confidence 999999999652 1335788999999999999999999 889999999999
Q ss_pred ceEEcCCCCeeecccccceecCCCCcc--ccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCC
Q 003504 667 SVYLDMNLEPRLSDFGLAKIFGNGLDE--EIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GKKPLGDDYP 743 (815)
Q Consensus 667 NIll~~~~~~kl~Dfgla~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~ 743 (815)
||++++++.+||+|||+++........ ....++..|+|||.+.+.. ++.++|||||||++|||++ |..||.....
T Consensus 134 nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~Dv~slG~il~el~t~g~~p~~~~~~ 211 (263)
T cd05052 134 NCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK--FSIKSDVWAFGVLLWEIATYGMSPYPGIDL 211 (263)
T ss_pred eEEEcCCCcEEeCCCccccccccceeeccCCCCCccccCCHHHhccCC--CCchhHHHHHHHHHHHHHcCCCCCCCCCCH
Confidence 999999999999999999876543211 1222456899999887665 6889999999999999998 9999865322
Q ss_pred ccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhh
Q 003504 744 EEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDI 811 (815)
Q Consensus 744 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 811 (815)
+ +...... . ......+...+.++.+++.+||..+|++||++.+++++|+++
T Consensus 212 ~-------~~~~~~~-~---------~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 212 S-------QVYELLE-K---------GYRMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred H-------HHHHHHH-C---------CCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 1 1111111 1 111122344567899999999999999999999999999875
No 53
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=5.2e-38 Score=328.27 Aligned_cols=254 Identities=26% Similarity=0.394 Sum_probs=206.4
Q ss_pred hcCCCCCCeecccCCeeeEEEEcCCCcEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeC
Q 003504 507 TSNFDRGTLLAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYM 586 (815)
Q Consensus 507 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 586 (815)
.++|++.+.||+|+||.||+|...+++.||||.++.. ....+++.+|+.++++++||||+++++++...+..++||||+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPG-TMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELM 83 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCC-cccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecc
Confidence 4568888999999999999999878889999998653 344677999999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCC
Q 003504 587 ENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKAS 666 (815)
Q Consensus 587 ~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~ 666 (815)
++++|.+++... ....++|..+..++.|++.||.||| +.+++||||||+
T Consensus 84 ~~~~L~~~~~~~----------------------------~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ 132 (261)
T cd05068 84 KYGSLLEYLQGG----------------------------AGRALKLPQLIDMAAQVASGMAYLE---AQNYIHRDLAAR 132 (261)
T ss_pred cCCcHHHHHhcc----------------------------CCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCcc
Confidence 999999999652 1345789999999999999999999 789999999999
Q ss_pred ceEEcCCCCeeecccccceecCCCCcc--ccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCC
Q 003504 667 SVYLDMNLEPRLSDFGLAKIFGNGLDE--EIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GKKPLGDDYP 743 (815)
Q Consensus 667 NIll~~~~~~kl~Dfgla~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~ 743 (815)
||++++++.+||+|||+++........ .....+..|+|||++.+.. ++.++||||||+++||+++ |+.||.....
T Consensus 133 Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~Di~slG~~l~el~t~g~~p~~~~~~ 210 (261)
T cd05068 133 NVLVGENNICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAALYNR--FSIKSDVWSFGILLTEIVTYGRMPYPGMTN 210 (261)
T ss_pred eEEEcCCCCEEECCcceEEEccCCcccccCCCcCceeccCccccccCC--CCchhhHHHHHHHHHHHHhcCCCCCCCCCH
Confidence 999999999999999999877532211 1122345799999887655 7889999999999999999 9999865321
Q ss_pred ccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhh
Q 003504 744 EEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDI 811 (815)
Q Consensus 744 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 811 (815)
. .+.. ...... ....+...+..+.+++.+|++.+|++||++.++++.|+++
T Consensus 211 ~----~~~~----~~~~~~---------~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 211 A----EVLQ----QVDQGY---------RMPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred H----HHHH----HHHcCC---------CCCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence 1 1111 111110 1111334567899999999999999999999999999864
No 54
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=2.3e-38 Score=341.31 Aligned_cols=240 Identities=23% Similarity=0.268 Sum_probs=194.6
Q ss_pred CeecccCCeeeEEEEc-CCCcEEEEEEeecCCc---ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeCCCC
Q 003504 514 TLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGST---LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENG 589 (815)
Q Consensus 514 ~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~g 589 (815)
+.||+|+||.||+|+. .+|+.||||++..... .....+.+|++++++++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999985 5789999999875321 22346778999999999999999999999999999999999999
Q ss_pred ChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCceE
Q 003504 590 NLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVY 669 (815)
Q Consensus 590 sL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NIl 669 (815)
+|.+++.. ...+++.....++.|++.||+||| +.+|+||||||+|||
T Consensus 81 ~L~~~l~~------------------------------~~~~~~~~~~~~~~qi~~~L~~lH---~~~ivHrDlkp~NIl 127 (323)
T cd05571 81 ELFFHLSR------------------------------ERVFSEDRARFYGAEIVSALGYLH---SCDVVYRDLKLENLM 127 (323)
T ss_pred cHHHHHHH------------------------------cCCCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHEE
Confidence 99999864 235678888899999999999999 899999999999999
Q ss_pred EcCCCCeeecccccceecCC-CCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCccccc
Q 003504 670 LDMNLEPRLSDFGLAKIFGN-GLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEG 748 (815)
Q Consensus 670 l~~~~~~kl~Dfgla~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~ 748 (815)
++.++.+||+|||+++.... +.......||+.|+|||++.+.. ++.++|||||||++|||++|+.||......
T Consensus 128 l~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DiwSlG~il~elltg~~Pf~~~~~~---- 201 (323)
T cd05571 128 LDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDND--YGRAVDWWGLGVVMYEMMCGRLPFYNQDHE---- 201 (323)
T ss_pred ECCCCCEEEeeCCCCcccccCCCcccceecCccccChhhhcCCC--CCccccCcccchhhhhhhcCCCCCCCCCHH----
Confidence 99999999999999975432 22334456999999999987665 789999999999999999999999753211
Q ss_pred cHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCC-----CHHHHHH
Q 003504 749 NLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRP-----SMQQIVG 806 (815)
Q Consensus 749 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----s~~~v~~ 806 (815)
.......... . ..+...+.++.+++.+||+.||++|| ++.++++
T Consensus 202 ---~~~~~~~~~~-------~----~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 202 ---KLFELILMEE-------I----RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred ---HHHHHHHcCC-------C----CCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 1111111111 0 11334556788999999999999999 7888864
No 55
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=1.3e-38 Score=338.01 Aligned_cols=244 Identities=22% Similarity=0.249 Sum_probs=198.8
Q ss_pred cCCCCCCeecccCCeeeEEEEcC-CCcEEEEEEeecCCc---ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEE
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFLP-GGIHVAVKVLVHGST---LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIY 583 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 583 (815)
++|++.+.||+|+||.||+|... +++.||+|++..... ...+.+.+|++++++++||||+++++++.+....++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 36888999999999999999954 688999999864321 23456889999999999999999999999999999999
Q ss_pred EeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccC
Q 003504 584 DYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDI 663 (815)
Q Consensus 584 ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDl 663 (815)
||+++|+|.+++.. ...+++.....++.|++.||+||| +.+|+||||
T Consensus 81 e~~~~~~L~~~~~~------------------------------~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl 127 (291)
T cd05612 81 EYVPGGELFSYLRN------------------------------SGRFSNSTGLFYASEIVCALEYLH---SKEIVYRDL 127 (291)
T ss_pred eCCCCCCHHHHHHH------------------------------cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCC
Confidence 99999999999964 224677888899999999999999 899999999
Q ss_pred CCCceEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCC
Q 003504 664 KASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYP 743 (815)
Q Consensus 664 k~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~ 743 (815)
||+||+++.++.+||+|||+++..... .....|++.|+|||++.+.. ++.++|||||||++|||++|+.||.....
T Consensus 128 kp~NIli~~~~~~kl~Dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~~~--~~~~~DiwSlG~il~~l~~g~~pf~~~~~ 203 (291)
T cd05612 128 KPENILLDKEGHIKLTDFGFAKKLRDR--TWTLCGTPEYLAPEVIQSKG--HNKAVDWWALGILIYEMLVGYPPFFDDNP 203 (291)
T ss_pred CHHHeEECCCCCEEEEecCcchhccCC--cccccCChhhcCHHHHcCCC--CCchhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 999999999999999999999876432 23346899999999987765 68899999999999999999999975332
Q ss_pred ccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCC-----HHHHHH
Q 003504 744 EEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPS-----MQQIVG 806 (815)
Q Consensus 744 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs-----~~~v~~ 806 (815)
.+ ......... ...+......+.+++.+||+.||.+||+ ++++++
T Consensus 204 ~~-------~~~~i~~~~-----------~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 253 (291)
T cd05612 204 FG-------IYEKILAGK-----------LEFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKN 253 (291)
T ss_pred HH-------HHHHHHhCC-----------cCCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhc
Confidence 11 112221111 0112233567889999999999999995 777764
No 56
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=2.5e-38 Score=342.76 Aligned_cols=252 Identities=23% Similarity=0.262 Sum_probs=202.4
Q ss_pred CCCCCCeecccCCeeeEEEEcC-CCcEEEEEEeecCC---cccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEE
Q 003504 509 NFDRGTLLAEGKFGPVYRGFLP-GGIHVAVKVLVHGS---TLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYD 584 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 584 (815)
+|++.+.||+|+||.||+|+.. +++.||||++.... ......+.+|++++..++||||+++++++...+..++|||
T Consensus 2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e 81 (333)
T cd05600 2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAME 81 (333)
T ss_pred CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEe
Confidence 6888899999999999999964 58899999997532 1234567889999999999999999999999999999999
Q ss_pred eCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCC
Q 003504 585 YMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIK 664 (815)
Q Consensus 585 y~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk 664 (815)
|+++|+|.+++.. ...+++.....++.|++.||+||| +.+|+|||||
T Consensus 82 ~~~g~~L~~~l~~------------------------------~~~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlk 128 (333)
T cd05600 82 YVPGGDFRTLLNN------------------------------LGVLSEDHARFYMAEMFEAVDALH---ELGYIHRDLK 128 (333)
T ss_pred CCCCCCHHHHHHH------------------------------cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCC
Confidence 9999999999964 234677888899999999999999 8999999999
Q ss_pred CCceEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCc
Q 003504 665 ASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPE 744 (815)
Q Consensus 665 ~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~ 744 (815)
|+||+++.++.+||+|||+++.... ......||+.|+|||++.+.. ++.++|||||||++|||++|+.||......
T Consensus 129 p~Nil~~~~~~~kL~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwslG~il~ell~g~~pf~~~~~~ 204 (333)
T cd05600 129 PENFLIDASGHIKLTDFGLSKGIVT--YANSVVGSPDYMAPEVLRGKG--YDFTVDYWSLGCMLYEFLCGFPPFSGSTPN 204 (333)
T ss_pred HHHEEECCCCCEEEEeCcCCccccc--ccCCcccCccccChhHhcCCC--CCCccceecchHHHhhhhhCCCCCCCCCHH
Confidence 9999999999999999999986543 233456999999999988765 789999999999999999999999764432
Q ss_pred cccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003504 745 EKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGL 807 (815)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~ 807 (815)
+....+..|.. ....+... ......+.++.+++.+|+..+|++||+++++++.
T Consensus 205 ~~~~~i~~~~~---------~~~~~~~~-~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 205 ETWENLKYWKE---------TLQRPVYD-DPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred HHHHHHHhccc---------cccCCCCC-ccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 22211111110 00011110 0012346678899999999999999999999864
No 57
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.2e-38 Score=319.29 Aligned_cols=245 Identities=22% Similarity=0.385 Sum_probs=210.4
Q ss_pred CCCCCCeecccCCeeeEEEE-cCCCcEEEEEEeecCCcccHH---HHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEE
Q 003504 509 NFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHGSTLTDQ---EAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYD 584 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~l~~~~~~~~~---~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 584 (815)
+|++.+.+|+|.||.|-+|. ...|+.||||.+++....+++ .+.+|++||..|+||||+.++.+|+..+...+|||
T Consensus 54 RyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivME 133 (668)
T KOG0611|consen 54 RYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVME 133 (668)
T ss_pred HHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEEE
Confidence 57778899999999999999 478999999999887666655 46799999999999999999999999999999999
Q ss_pred eCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCC
Q 003504 585 YMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIK 664 (815)
Q Consensus 585 y~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk 664 (815)
|..+|.|++|+.+ ...++.+....++.||..|+.|+| ..++||||||
T Consensus 134 YaS~GeLYDYiSe------------------------------r~~LsErEaRhfFRQIvSAVhYCH---knrVvHRDLK 180 (668)
T KOG0611|consen 134 YASGGELYDYISE------------------------------RGSLSEREARHFFRQIVSAVHYCH---KNRVVHRDLK 180 (668)
T ss_pred ecCCccHHHHHHH------------------------------hccccHHHHHHHHHHHHHHHHHHh---hccceecccc
Confidence 9999999999965 346778888899999999999999 8999999999
Q ss_pred CCceEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCc
Q 003504 665 ASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPE 744 (815)
Q Consensus 665 ~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~ 744 (815)
.+|||+|.++++||+|||++-.+..+...+++||++-|.+||++.+..+ -++.+|-||+||++|-|+.|..||++.+
T Consensus 181 LENILLD~N~NiKIADFGLSNly~~~kfLqTFCGSPLYASPEIvNG~PY-~GPEVDsWsLGvLLYtLVyGtMPFDG~D-- 257 (668)
T KOG0611|consen 181 LENILLDQNNNIKIADFGLSNLYADKKFLQTFCGSPLYASPEIVNGTPY-KGPEVDSWSLGVLLYTLVYGTMPFDGRD-- 257 (668)
T ss_pred hhheeecCCCCeeeeccchhhhhccccHHHHhcCCcccCCccccCCCCC-CCCccchhhHHHHHHHHhhcccccCCch--
Confidence 9999999999999999999999988888889999999999999998875 4889999999999999999999998632
Q ss_pred cccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 745 EKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
....++++.+. .+..| +.+....-+++.++..+|++|-|..+|..
T Consensus 258 -----hk~lvrQIs~G----aYrEP--------~~PSdA~gLIRwmLmVNP~RRATieDiAs 302 (668)
T KOG0611|consen 258 -----HKRLVRQISRG----AYREP--------ETPSDASGLIRWMLMVNPERRATIEDIAS 302 (668)
T ss_pred -----HHHHHHHhhcc----cccCC--------CCCchHHHHHHHHHhcCcccchhHHHHhh
Confidence 22223332221 12222 22345678899999999999999999864
No 58
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=4.1e-38 Score=340.52 Aligned_cols=262 Identities=21% Similarity=0.320 Sum_probs=201.5
Q ss_pred hcCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCc-ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEE
Q 003504 507 TSNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGST-LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYD 584 (815)
Q Consensus 507 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 584 (815)
.++|++.+.||+|+||.||+|+. .++..||+|.+..... .....+.+|++++++++||||+++++++...+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence 35788999999999999999995 4688899999875422 234578999999999999999999999999999999999
Q ss_pred eCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCC
Q 003504 585 YMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIK 664 (815)
Q Consensus 585 y~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk 664 (815)
|+++|+|.+++... ..+++.....++.|++.||+|||+ ..+|+|||||
T Consensus 84 ~~~~~~L~~~l~~~------------------------------~~~~~~~~~~~~~~i~~~l~~lH~--~~~ivH~dlk 131 (331)
T cd06649 84 HMDGGSLDQVLKEA------------------------------KRIPEEILGKVSIAVLRGLAYLRE--KHQIMHRDVK 131 (331)
T ss_pred cCCCCcHHHHHHHc------------------------------CCCCHHHHHHHHHHHHHHHHHHhh--cCCEEcCCCC
Confidence 99999999999642 246778889999999999999993 2469999999
Q ss_pred CCceEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCc
Q 003504 665 ASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPE 744 (815)
Q Consensus 665 ~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~ 744 (815)
|+||+++.++.+||+|||+++..... ......|+..|+|||++.+.. ++.++|||||||++|||++|+.||......
T Consensus 132 p~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~--~~~~~DiwslG~il~el~tg~~p~~~~~~~ 208 (331)
T cd06649 132 PSNILVNSRGEIKLCDFGVSGQLIDS-MANSFVGTRSYMSPERLQGTH--YSVQSDIWSMGLSLVELAIGRYPIPPPDAK 208 (331)
T ss_pred hhhEEEcCCCcEEEccCccccccccc-ccccCCCCcCcCCHhHhcCCC--CCchHhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 99999999999999999999866432 223446899999999988665 788999999999999999999999753321
Q ss_pred cccccHHHHHHHH-HhcCCC-Cc--------------------------------cccccccCCCCHHHHHHHHHHHhhc
Q 003504 745 EKEGNLVSWVRGL-VRNNKG-SR--------------------------------AIDPKIRDTGPEKQMEEALKIGYLC 790 (815)
Q Consensus 745 ~~~~~~~~~~~~~-~~~~~~-~~--------------------------------~~~~~~~~~~~~~~~~~~~~l~~~C 790 (815)
+. ...+... ...... .. +.............+.++.+++.+|
T Consensus 209 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 284 (331)
T cd06649 209 EL----EAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKC 284 (331)
T ss_pred HH----HHHhcccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHH
Confidence 11 1100000 000000 00 0000000000123456789999999
Q ss_pred cccCCCCCCCHHHHHHH
Q 003504 791 TADLPLKRPSMQQIVGL 807 (815)
Q Consensus 791 l~~dP~~RPs~~~v~~~ 807 (815)
|+.||++||+++++++.
T Consensus 285 L~~~P~~Rpt~~ell~h 301 (331)
T cd06649 285 LIKNPAERADLKMLMNH 301 (331)
T ss_pred ccCCcccCCCHHHHhcC
Confidence 99999999999999864
No 59
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=5.3e-38 Score=345.62 Aligned_cols=287 Identities=24% Similarity=0.321 Sum_probs=209.2
Q ss_pred HhcCCCCCCeecccCCeeeEEEEcC------CCcEEEEEEeecCCc-ccHHHHHHHHHHhcCCC-CCCceeeeeEEEeCC
Q 003504 506 ATSNFDRGTLLAEGKFGPVYRGFLP------GGIHVAVKVLVHGST-LTDQEAARELEYLGRIK-HPNLVPLTGYCIAGD 577 (815)
Q Consensus 506 ~~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~ 577 (815)
..++|.+++.||+|+||.||+|+.. .+..||||++..... ...+.+.+|+++++++. ||||++++|+|.+..
T Consensus 35 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~ 114 (400)
T cd05105 35 PRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSG 114 (400)
T ss_pred cccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCC
Confidence 4568889999999999999999852 234699999965432 23457899999999996 999999999999999
Q ss_pred eeEEEEEeCCCCChhhhhccCCCCCccc----------------cCCCCCcccc-----C-------CCcc---------
Q 003504 578 QRIAIYDYMENGNLQNLLHDLPLGVQTT----------------EDWSTDTWEE-----D-------GTNS--------- 620 (815)
Q Consensus 578 ~~~lv~ey~~~gsL~~~l~~~~~~~~~~----------------~~~~~~~~~~-----~-------~~~~--------- 620 (815)
..++||||+++|+|.++++......... .....+.+.. . ....
T Consensus 115 ~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (400)
T cd05105 115 PIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEI 194 (400)
T ss_pred ceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhh
Confidence 9999999999999999997642110000 0000000000 0 0000
Q ss_pred ------------------c-----------cccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCceEEc
Q 003504 621 ------------------I-----------QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLD 671 (815)
Q Consensus 621 ------------------~-----------~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NIll~ 671 (815)
. .........+++..+.+++.|++.||+||| +.+|+||||||+|||++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivH~dikp~Nill~ 271 (400)
T cd05105 195 KEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLA---SKNCVHRDLAARNVLLA 271 (400)
T ss_pred hhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChHhEEEe
Confidence 0 000011235889999999999999999999 88999999999999999
Q ss_pred CCCCeeecccccceecCCCCc---cccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCCcccc
Q 003504 672 MNLEPRLSDFGLAKIFGNGLD---EEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKE 747 (815)
Q Consensus 672 ~~~~~kl~Dfgla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~~~~ 747 (815)
.++.+||+|||+++....... .....++..|+|||.+.+.. ++.++|||||||++|||++ |..||.......
T Consensus 272 ~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~-- 347 (400)
T cd05105 272 QGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNL--YTTLSDVWSYGILLWEIFSLGGTPYPGMIVDS-- 347 (400)
T ss_pred CCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCC--CCchhhHHHHHHHHHHHHHCCCCCCcccchhH--
Confidence 999999999999987643221 22234678899999987665 7899999999999999997 999986432111
Q ss_pred ccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhhhh
Q 003504 748 GNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDIES 813 (815)
Q Consensus 748 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~~ 813 (815)
.+. ...... .....+..++.++.+++.+||+.||++||++.+|.+.|+++-+
T Consensus 348 -~~~----~~~~~~---------~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 348 -TFY----NKIKSG---------YRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred -HHH----HHHhcC---------CCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 111 111111 1111234456789999999999999999999999999998753
No 60
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=3.7e-38 Score=338.91 Aligned_cols=254 Identities=24% Similarity=0.374 Sum_probs=201.2
Q ss_pred cCCCCCCeecccCCeeeEEEEcC-CCc----EEEEEEeecCC-cccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEE
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFLP-GGI----HVAVKVLVHGS-TLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIA 581 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~----~vavK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 581 (815)
.+|+..+.||+|+||.||+|++. ++. .||||.+.... ....+.+.+|+.+++.++||||++++|+|... ..++
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~ 85 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 85 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence 46888999999999999999853 333 48999986532 23456788999999999999999999999864 5679
Q ss_pred EEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeec
Q 003504 582 IYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHR 661 (815)
Q Consensus 582 v~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHr 661 (815)
|+||+++|+|.++++.. ...+++...++++.|++.||+||| +.+|+||
T Consensus 86 v~e~~~~g~l~~~l~~~-----------------------------~~~~~~~~~~~~~~qi~~~L~~LH---~~~iiH~ 133 (316)
T cd05108 86 ITQLMPFGCLLDYVREH-----------------------------KDNIGSQYLLNWCVQIAKGMNYLE---ERRLVHR 133 (316)
T ss_pred eeecCCCCCHHHHHHhc-----------------------------cccCCHHHHHHHHHHHHHHHHHHH---hcCeecc
Confidence 99999999999999752 234678889999999999999999 8999999
Q ss_pred cCCCCceEEcCCCCeeecccccceecCCCCcc---ccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CCCC
Q 003504 662 DIKASSVYLDMNLEPRLSDFGLAKIFGNGLDE---EIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GKKP 737 (815)
Q Consensus 662 Dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p 737 (815)
||||+|||++.++.+||+|||+++........ ....++..|+|||.+.... ++.++|||||||++||+++ |+.|
T Consensus 134 dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~--~~~~~Di~slGv~l~el~t~g~~p 211 (316)
T cd05108 134 DLAARNVLVKTPQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 211 (316)
T ss_pred ccchhheEecCCCcEEEccccccccccCCCcceeccCCccceeecChHHhccCC--CCchhhhHHHHHHHHHHHcCCCCC
Confidence 99999999999999999999999876543321 2223466899999987665 7899999999999999998 9999
Q ss_pred CCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhhhh
Q 003504 738 LGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDIES 813 (815)
Q Consensus 738 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~~ 813 (815)
|.+.... .+.. ..... . ....+..++.++.+++.+||..+|++||++.+++..+.++..
T Consensus 212 ~~~~~~~----~~~~----~~~~~--~-------~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~ 270 (316)
T cd05108 212 YDGIPAS----EISS----ILEKG--E-------RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 270 (316)
T ss_pred CCCCCHH----HHHH----HHhCC--C-------CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHc
Confidence 8753221 1111 11111 0 011122345678899999999999999999999999987753
No 61
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-39 Score=348.13 Aligned_cols=249 Identities=25% Similarity=0.371 Sum_probs=208.3
Q ss_pred CCCeecccCCeeeEEEEc-CCC----cEEEEEEeecCC-cccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEe
Q 003504 512 RGTLLAEGKFGPVYRGFL-PGG----IHVAVKVLVHGS-TLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDY 585 (815)
Q Consensus 512 ~~~~ig~G~~g~Vy~~~~-~~~----~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 585 (815)
..++||+|+||+||||.+ +.| .+||+|++.... ....+++..|+-+|++++|||+++++|+|..+. ..+|++|
T Consensus 700 k~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq~ 778 (1177)
T KOG1025|consen 700 KDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQL 778 (1177)
T ss_pred hhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHHh
Confidence 368999999999999985 333 469999987653 345678999999999999999999999998765 8899999
Q ss_pred CCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCC
Q 003504 586 MENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKA 665 (815)
Q Consensus 586 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~ 665 (815)
|+.|+|.+|++.. ...+--...+.|..|||+||.||| ++++|||||.+
T Consensus 779 mP~G~LlDyvr~h-----------------------------r~~igsq~lLnw~~QIAkgM~YLe---~qrlVHrdLaa 826 (1177)
T KOG1025|consen 779 MPLGCLLDYVREH-----------------------------RDNIGSQDLLNWCYQIAKGMKYLE---EQRLVHRDLAA 826 (1177)
T ss_pred cccchHHHHHHHh-----------------------------hccccHHHHHHHHHHHHHHHHHHH---hcchhhhhhhh
Confidence 9999999999864 334556778899999999999999 89999999999
Q ss_pred CceEEcCCCCeeecccccceecCCCCcccccc---ccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCC
Q 003504 666 SSVYLDMNLEPRLSDFGLAKIFGNGLDEEIAR---GSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GKKPLGDD 741 (815)
Q Consensus 666 ~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~---gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~ 741 (815)
+||||..-..+||.|||+++....+..+.... -.+.|||-|.+.-.. ++.++|||||||.+||++| |..||++.
T Consensus 827 RNVLVksP~hvkitdfgla~ll~~d~~ey~~~~gK~pikwmale~i~~~~--~thqSDVWsfGVtiWElmTFGa~Py~gi 904 (1177)
T KOG1025|consen 827 RNVLVKSPNHVKITDFGLAKLLAPDEKEYSAPGGKVPIKWMALESIRIRK--YTHQSDVWSFGVTIWELMTFGAKPYDGI 904 (1177)
T ss_pred hheeecCCCeEEEEecchhhccCcccccccccccccCcHHHHHHHhhccC--CCchhhhhhhhhhHHHHHhcCCCccCCC
Confidence 99999999999999999999988766444333 356799999887666 7999999999999999999 99999874
Q ss_pred CCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhhh
Q 003504 742 YPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDIE 812 (815)
Q Consensus 742 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~ 812 (815)
..++. ...+ ...-+..+|+.+..++..++.+||..|+..||+|+++..++.++.
T Consensus 905 ~~~eI--------~dll---------e~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~a 958 (1177)
T KOG1025|consen 905 PAEEI--------PDLL---------EKGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMA 958 (1177)
T ss_pred CHHHh--------hHHH---------hccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHh
Confidence 43322 1122 223345568889999999999999999999999999999988764
No 62
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=2.4e-38 Score=341.97 Aligned_cols=244 Identities=24% Similarity=0.287 Sum_probs=197.7
Q ss_pred cCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCC---cccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEE
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGS---TLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIY 583 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 583 (815)
++|++.+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 4688889999999999999996 468899999986532 123456889999999999999999999999999999999
Q ss_pred EeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccC
Q 003504 584 DYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDI 663 (815)
Q Consensus 584 ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDl 663 (815)
||+++|+|.+++... ..+++.....++.|++.||+||| +.+|+||||
T Consensus 98 e~~~~~~L~~~l~~~------------------------------~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~dl 144 (329)
T PTZ00263 98 EFVVGGELFTHLRKA------------------------------GRFPNDVAKFYHAELVLAFEYLH---SKDIIYRDL 144 (329)
T ss_pred cCCCCChHHHHHHHc------------------------------CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCC
Confidence 999999999999652 24566777889999999999999 899999999
Q ss_pred CCCceEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCC
Q 003504 664 KASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYP 743 (815)
Q Consensus 664 k~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~ 743 (815)
||+|||++.++.+||+|||+++..... .....||+.|+|||++.+.. ++.++|||||||++|||++|+.||.+..+
T Consensus 145 kp~NIll~~~~~~kl~Dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~~~--~~~~~DiwslG~il~elltg~~pf~~~~~ 220 (329)
T PTZ00263 145 KPENLLLDNKGHVKVTDFGFAKKVPDR--TFTLCGTPEYLAPEVIQSKG--HGKAVDWWTMGVLLYEFIAGYPPFFDDTP 220 (329)
T ss_pred CHHHEEECCCCCEEEeeccCceEcCCC--cceecCChhhcCHHHHcCCC--CCCcceeechHHHHHHHHcCCCCCCCCCH
Confidence 999999999999999999999876432 23456999999999988766 68899999999999999999999975332
Q ss_pred ccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCC-----HHHHHH
Q 003504 744 EEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPS-----MQQIVG 806 (815)
Q Consensus 744 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs-----~~~v~~ 806 (815)
.+ ........ . . ..+...+.++.+++.+||+.||.+||+ ++++++
T Consensus 221 ~~-------~~~~i~~~-~--------~--~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 270 (329)
T PTZ00263 221 FR-------IYEKILAG-R--------L--KFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKN 270 (329)
T ss_pred HH-------HHHHHhcC-C--------c--CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 11 11111111 0 0 112224456889999999999999996 577653
No 63
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=4.2e-38 Score=309.58 Aligned_cols=259 Identities=23% Similarity=0.281 Sum_probs=202.8
Q ss_pred cCCCCCCeecccCCeeeEEEE-cCCCcEEEEEEeecCCcc--cHHHHHHHHHHhcCCCCCCceeeeeEEEe--CCeeEEE
Q 003504 508 SNFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHGSTL--TDQEAARELEYLGRIKHPNLVPLTGYCIA--GDQRIAI 582 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~g~~~~--~~~~~lv 582 (815)
++|+..+.|++|+||.||+|+ ..++..||+|+++-.... -.-.-.|||.+|.+.+|||||.+-.+... -+..|+|
T Consensus 76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~V 155 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIV 155 (419)
T ss_pred HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeee
Confidence 457778999999999999999 467889999999754321 12345799999999999999999998875 3578999
Q ss_pred EEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecc
Q 003504 583 YDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRD 662 (815)
Q Consensus 583 ~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrD 662 (815)
||||+. +|.++++.. .+++.......++.|+++|++||| ...|+|||
T Consensus 156 Me~~Eh-DLksl~d~m-----------------------------~q~F~~~evK~L~~QlL~glk~lH---~~wilHRD 202 (419)
T KOG0663|consen 156 MEYVEH-DLKSLMETM-----------------------------KQPFLPGEVKTLMLQLLRGLKHLH---DNWILHRD 202 (419)
T ss_pred HHHHHh-hHHHHHHhc-----------------------------cCCCchHHHHHHHHHHHHHHHHHh---hceeEecc
Confidence 999998 999999753 345677788899999999999999 78999999
Q ss_pred CCCCceEEcCCCCeeecccccceecCCCC-ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCC
Q 003504 663 IKASSVYLDMNLEPRLSDFGLAKIFGNGL-DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDD 741 (815)
Q Consensus 663 lk~~NIll~~~~~~kl~Dfgla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~ 741 (815)
||++|+|++..|.+||+|||+|+.++... ..+..+-|.+|+|||++.+... |++..|+||+|||+.|++++++-|.+.
T Consensus 203 LK~SNLLm~~~G~lKiaDFGLAR~ygsp~k~~T~lVVTLWYRaPELLLG~~t-yst~iDMWSvGCI~aE~l~~kPlf~G~ 281 (419)
T KOG0663|consen 203 LKTSNLLLSHKGILKIADFGLAREYGSPLKPYTPLVVTLWYRAPELLLGAKT-YSTAVDMWSVGCIFAELLTQKPLFPGK 281 (419)
T ss_pred cchhheeeccCCcEEecccchhhhhcCCcccCcceEEEeeecCHHHhcCCcc-cCcchhhhhHHHHHHHHHhcCCCCCCC
Confidence 99999999999999999999999998654 3455668999999999988775 789999999999999999999988864
Q ss_pred CCccccccHHHHHHHHHhcCCCCcccccccc-------------------CCCCH-HHHHHHHHHHhhccccCCCCCCCH
Q 003504 742 YPEEKEGNLVSWVRGLVRNNKGSRAIDPKIR-------------------DTGPE-KQMEEALKIGYLCTADLPLKRPSM 801 (815)
Q Consensus 742 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~-~~~~~~~~l~~~Cl~~dP~~RPs~ 801 (815)
..-+....+...+ ....+...|++. ..++. ...+.-++++...+..||.+|.|+
T Consensus 282 sE~dQl~~If~ll------GtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA 355 (419)
T KOG0663|consen 282 SEIDQLDKIFKLL------GTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITA 355 (419)
T ss_pred chHHHHHHHHHHh------CCCccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccH
Confidence 3222211121111 111111112111 01111 134678899999999999999999
Q ss_pred HHHHH
Q 003504 802 QQIVG 806 (815)
Q Consensus 802 ~~v~~ 806 (815)
+|.++
T Consensus 356 ~~~L~ 360 (419)
T KOG0663|consen 356 EDGLK 360 (419)
T ss_pred HHhhc
Confidence 99875
No 64
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=5.9e-38 Score=332.04 Aligned_cols=268 Identities=25% Similarity=0.385 Sum_probs=206.9
Q ss_pred cCCCCCCeecccCCeeeEEEEcCC------CcEEEEEEeecCCc-ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeE
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFLPG------GIHVAVKVLVHGST-LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRI 580 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~~~------~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 580 (815)
++|++.+.||+|+||.||+|...+ ...||+|.+..... .....+.+|+.++.+++||||+++++++......+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC 84 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence 367888999999999999998532 25799999865332 23457899999999999999999999999988999
Q ss_pred EEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeee
Q 003504 581 AIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIH 660 (815)
Q Consensus 581 lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivH 660 (815)
++|||+++|+|.+++.......... ...........+++.....++.|++.||+||| +.+++|
T Consensus 85 ~~~e~~~~~~L~~~l~~~~~~~~~~--------------~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH---~~~i~H 147 (283)
T cd05048 85 MLFEYLAHGDLHEFLVRNSPHSDVG--------------AESGDETVKSSLDCSDFLHIAIQIAAGMEYLS---SHHFVH 147 (283)
T ss_pred EEEecCCCCcHHHHHHhcCCCcccc--------------cccccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCeec
Confidence 9999999999999997532110000 00000011246788999999999999999999 889999
Q ss_pred ccCCCCceEEcCCCCeeecccccceecCCCC---ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CCC
Q 003504 661 RDIKASSVYLDMNLEPRLSDFGLAKIFGNGL---DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GKK 736 (815)
Q Consensus 661 rDlk~~NIll~~~~~~kl~Dfgla~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~ 736 (815)
|||||+||++++++.+||+|||+++...... ......+++.|+|||.+.... ++.++|||||||++|||++ |..
T Consensus 148 ~dlkp~Nil~~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~sDv~slG~il~el~~~g~~ 225 (283)
T cd05048 148 RDLAARNCLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGK--FTTESDIWSFGVVLWEIFSYGLQ 225 (283)
T ss_pred cccccceEEEcCCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCc--CchhhhHHHHHHHHHHHHcCCCC
Confidence 9999999999999999999999998654322 122334678899999887655 6899999999999999998 999
Q ss_pred CCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhh
Q 003504 737 PLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDI 811 (815)
Q Consensus 737 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 811 (815)
||.+....+ +... +... .....+..++.++.+++.+||+.||++||++++|++.|+.+
T Consensus 226 p~~~~~~~~----~~~~----i~~~---------~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05048 226 PYYGFSNQE----VIEM----IRSR---------QLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW 283 (283)
T ss_pred CCCCCCHHH----HHHH----HHcC---------CcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence 997543221 1111 1111 11112455678899999999999999999999999999753
No 65
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-39 Score=342.32 Aligned_cols=247 Identities=27% Similarity=0.394 Sum_probs=205.2
Q ss_pred CCCCeecccCCeeeEEEEcC--CC--cEEEEEEeecCCcc-cHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEe
Q 003504 511 DRGTLLAEGKFGPVYRGFLP--GG--IHVAVKVLVHGSTL-TDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDY 585 (815)
Q Consensus 511 ~~~~~ig~G~~g~Vy~~~~~--~~--~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 585 (815)
...+.||+|.||.|++|.|. +| ..||||.++..... ...+|.+|+.+|.+|+|||++++||++.+ ....+|+|.
T Consensus 113 ~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~EL 191 (1039)
T KOG0199|consen 113 KLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFEL 191 (1039)
T ss_pred HHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhh
Confidence 34678999999999999974 33 46899999876554 56799999999999999999999999987 688899999
Q ss_pred CCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCC
Q 003504 586 MENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKA 665 (815)
Q Consensus 586 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~ 665 (815)
++.|||.+.|++.. ...+-......+|.|||.||.||. ++++|||||.+
T Consensus 192 aplGSLldrLrka~----------------------------~~~llv~~Lcdya~QiA~aM~YLe---skrlvHRDLAA 240 (1039)
T KOG0199|consen 192 APLGSLLDRLRKAK----------------------------KAILLVSRLCDYAMQIAKAMQYLE---SKRLVHRDLAA 240 (1039)
T ss_pred cccchHHHHHhhcc----------------------------ccceeHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhh
Confidence 99999999998732 223455666789999999999999 89999999999
Q ss_pred CceEEcCCCCeeecccccceecCCCCcccccc----ccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCC
Q 003504 666 SSVYLDMNLEPRLSDFGLAKIFGNGLDEEIAR----GSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GKKPLGD 740 (815)
Q Consensus 666 ~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~----gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~ 740 (815)
+|+|+-..-.+||+|||+.+.++.+...+... -...|+|||.+.... ++.++|||+|||.+|||+| |..||.+
T Consensus 241 RNlllasprtVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~k--FShaSDvWmyGVTiWEMFtyGEePW~G 318 (1039)
T KOG0199|consen 241 RNLLLASPRTVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRHRK--FSHASDVWMYGVTIWEMFTYGEEPWVG 318 (1039)
T ss_pred hhheecccceeeeecccceeccCCCCcceEecCCCcCcccccCHhHhcccc--ccccchhhhhhhhHHhhhccCCCCCCC
Confidence 99999998899999999999987665443322 356799999998777 8999999999999999999 8999976
Q ss_pred CCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 003504 741 DYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLL 808 (815)
Q Consensus 741 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L 808 (815)
.... ++. +.+|.+-+...|..|+++++++|..||..+|++||+|.++.+.+
T Consensus 319 ~~g~----qIL-------------~~iD~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 319 CRGI----QIL-------------KNIDAGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDL 369 (1039)
T ss_pred CCHH----HHH-------------HhccccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhH
Confidence 3321 111 12333444455888999999999999999999999999998554
No 66
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=6.8e-38 Score=332.83 Aligned_cols=265 Identities=20% Similarity=0.285 Sum_probs=196.2
Q ss_pred cCCCCCCeecccCCeeeEEEEc--CCCcEEEEEEeecCCc--ccHHHHHHHHHHhcCC---CCCCceeeeeEEEe-----
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFL--PGGIHVAVKVLVHGST--LTDQEAARELEYLGRI---KHPNLVPLTGYCIA----- 575 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~--~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l---~H~niv~l~g~~~~----- 575 (815)
++|++.+.||+|+||.||+|+. .+++.||||.++.... .....+.+|+.+++.+ +||||++++++|..
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 3688899999999999999985 3478899999865322 2234566777776665 69999999999863
Q ss_pred CCeeEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCC
Q 003504 576 GDQRIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCS 655 (815)
Q Consensus 576 ~~~~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~ 655 (815)
....++||||++ |+|.+++... ....+++..+..++.|++.||+||| +
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~----------------------------~~~~~~~~~~~~i~~qi~~aL~~lH---~ 128 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKV----------------------------PEPGVPTETIKDMMFQLLRGLDFLH---S 128 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhC----------------------------CCCCCCHHHHHHHHHHHHHHHHHHH---H
Confidence 345789999997 5999998652 1234788899999999999999999 8
Q ss_pred CCeeeccCCCCceEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCC
Q 003504 656 PPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735 (815)
Q Consensus 656 ~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~ 735 (815)
.+|+||||||+|||++.++.+||+|||+++............|++.|+|||.+.... ++.++|||||||++|||++|+
T Consensus 129 ~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~DiwslG~il~el~~g~ 206 (290)
T cd07862 129 HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSS--YATPVDLWSVGCIFAEMFRRK 206 (290)
T ss_pred CCeeeCCCCHHHEEEcCCCCEEEccccceEeccCCcccccccccccccChHHHhCCC--CCCccchHHHHHHHHHHHcCC
Confidence 999999999999999999999999999998766544444556899999999987655 688999999999999999999
Q ss_pred CCCCCCCCccccccHHHHHHHHHhcCCC------CccccccccC---CCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 736 KPLGDDYPEEKEGNLVSWVRGLVRNNKG------SRAIDPKIRD---TGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 736 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~---~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
.||.+....+....+......-...... ...+.+.-.. ......+..+.+++.+|++.||++||++.++++
T Consensus 207 ~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 207 PLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred CCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 9998644332222222111000000000 0000000000 001124466789999999999999999999985
No 67
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=9.7e-38 Score=331.16 Aligned_cols=267 Identities=26% Similarity=0.374 Sum_probs=208.6
Q ss_pred cCCCCCCeecccCCeeeEEEEc------CCCcEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEE
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFL------PGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIA 581 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 581 (815)
.+|.+.+.||+|+||.||++.. .++..+|+|.+........+.+.+|++++++++||||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 84 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence 4688889999999999999974 2346689999876555556679999999999999999999999999999999
Q ss_pred EEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeec
Q 003504 582 IYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHR 661 (815)
Q Consensus 582 v~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHr 661 (815)
||||+++|+|.++++....... ..........+++..+..++.|++.||+||| +.+++||
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~-----------------~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH---~~~i~H~ 144 (288)
T cd05093 85 VFEYMKHGDLNKFLRAHGPDAV-----------------LMAEGNRPAELTQSQMLHIAQQIAAGMVYLA---SQHFVHR 144 (288)
T ss_pred EEEcCCCCCHHHHHHHcCCccc-----------------cccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeec
Confidence 9999999999999975321100 0001122345899999999999999999999 8899999
Q ss_pred cCCCCceEEcCCCCeeecccccceecCCCCc---cccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CCCC
Q 003504 662 DIKASSVYLDMNLEPRLSDFGLAKIFGNGLD---EEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GKKP 737 (815)
Q Consensus 662 Dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p 737 (815)
||||+||++++++.+||+|||+++....... .....++..|+|||.+.+.. ++.++|||||||++|||++ |+.|
T Consensus 145 dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~sDiwslG~il~~l~t~g~~p 222 (288)
T cd05093 145 DLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRK--FTTESDVWSLGVVLWEIFTYGKQP 222 (288)
T ss_pred ccCcceEEEccCCcEEeccCCccccccCCceeecCCCCCccccccCHHHhccCC--CCchhhHHHHHHHHHHHHhCCCCC
Confidence 9999999999999999999999986543221 12233577899999987655 7889999999999999998 8999
Q ss_pred CCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhhhh
Q 003504 738 LGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDIES 813 (815)
Q Consensus 738 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~~ 813 (815)
|......+ . ..... ..... ..+...+.++.+++.+||+.+|.+||++++|.+.|+++.+
T Consensus 223 ~~~~~~~~----~---~~~i~-~~~~~---------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~ 281 (288)
T cd05093 223 WYQLSNNE----V---IECIT-QGRVL---------QRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAK 281 (288)
T ss_pred CCCCCHHH----H---HHHHH-cCCcC---------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence 86533211 1 11111 11100 0122344678999999999999999999999999998865
No 68
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=3.4e-38 Score=338.36 Aligned_cols=237 Identities=22% Similarity=0.255 Sum_probs=191.5
Q ss_pred ecccCCeeeEEEEc-CCCcEEEEEEeecCC---cccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeCCCCCh
Q 003504 516 LAEGKFGPVYRGFL-PGGIHVAVKVLVHGS---TLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNL 591 (815)
Q Consensus 516 ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL 591 (815)
||+|+||.||+|.. .+++.||+|++.... ......+.+|+.++++++||||+++++++...+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 69999999999995 468899999986532 22345678899999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCceEEc
Q 003504 592 QNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLD 671 (815)
Q Consensus 592 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NIll~ 671 (815)
.+++.. ...+++..+..++.|++.||+||| +.+|+||||||+||+++
T Consensus 81 ~~~l~~------------------------------~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~HrDlkp~Nili~ 127 (312)
T cd05585 81 FHHLQR------------------------------EGRFDLSRARFYTAELLCALENLH---KFNVIYRDLKPENILLD 127 (312)
T ss_pred HHHHHh------------------------------cCCCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHeEEC
Confidence 999964 224678888999999999999999 89999999999999999
Q ss_pred CCCCeeecccccceecCCC-CccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCccccccH
Q 003504 672 MNLEPRLSDFGLAKIFGNG-LDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNL 750 (815)
Q Consensus 672 ~~~~~kl~Dfgla~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~ 750 (815)
.++.+||+|||+++..... .......||+.|+|||.+.+.. ++.++|||||||++|||++|+.||.....
T Consensus 128 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwslGvil~el~tg~~pf~~~~~------- 198 (312)
T cd05585 128 YQGHIALCDFGLCKLNMKDDDKTNTFCGTPEYLAPELLLGHG--YTKAVDWWTLGVLLYEMLTGLPPFYDENV------- 198 (312)
T ss_pred CCCcEEEEECcccccCccCCCccccccCCcccCCHHHHcCCC--CCCccceechhHHHHHHHhCCCCcCCCCH-------
Confidence 9999999999999864322 2233456999999999987765 78999999999999999999999975322
Q ss_pred HHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCC---HHHHH
Q 003504 751 VSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPS---MQQIV 805 (815)
Q Consensus 751 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs---~~~v~ 805 (815)
....+...... ...+...+.++.+++.+||+.||++||+ +.+++
T Consensus 199 ~~~~~~~~~~~-----------~~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l 245 (312)
T cd05585 199 NEMYRKILQEP-----------LRFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIK 245 (312)
T ss_pred HHHHHHHHcCC-----------CCCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHH
Confidence 22222222211 0113345567889999999999999986 45554
No 69
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=6.3e-38 Score=332.44 Aligned_cols=265 Identities=20% Similarity=0.275 Sum_probs=199.5
Q ss_pred cCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCC-cccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEe
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGS-TLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDY 585 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 585 (815)
++|+..+.||+|+||.||+|.. .++..||+|.++... ......+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY 84 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence 4688899999999999999985 468899999986432 22345678999999999999999999999998899999999
Q ss_pred CCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCC
Q 003504 586 MENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKA 665 (815)
Q Consensus 586 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~ 665 (815)
+++ +|.+++... ...+++.....++.|++.||+||| +.+|+||||||
T Consensus 85 ~~~-~l~~~l~~~-----------------------------~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp 131 (288)
T cd07871 85 LDS-DLKQYLDNC-----------------------------GNLMSMHNVKIFMFQLLRGLSYCH---KRKILHRDLKP 131 (288)
T ss_pred CCc-CHHHHHHhc-----------------------------CCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCH
Confidence 985 999988642 234677888999999999999999 89999999999
Q ss_pred CceEEcCCCCeeecccccceecCCCC-ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCc
Q 003504 666 SSVYLDMNLEPRLSDFGLAKIFGNGL-DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPE 744 (815)
Q Consensus 666 ~NIll~~~~~~kl~Dfgla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~ 744 (815)
+|||++.++.+||+|||+++...... ......|++.|+|||.+.+... ++.++||||+||++|||++|+.||......
T Consensus 132 ~Nil~~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~~DiwslG~~l~~l~~g~~pf~~~~~~ 210 (288)
T cd07871 132 QNLLINEKGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTE-YSTPIDMWGVGCILYEMATGRPMFPGSTVK 210 (288)
T ss_pred HHEEECCCCCEEECcCcceeeccCCCccccCceecccccChHHhcCCcc-cCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 99999999999999999998654322 2234468999999998865432 688999999999999999999999764332
Q ss_pred cccccHHHHHH--------HHHhcCCCCccccccccCCC----CHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 745 EKEGNLVSWVR--------GLVRNNKGSRAIDPKIRDTG----PEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 745 ~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
+....+..... .............+...... ......+..+++.+|+..||.+|||++|+++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 211 EELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred HHHHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 22111111000 00000000111111111100 1123457889999999999999999999975
No 70
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=6.6e-38 Score=337.56 Aligned_cols=240 Identities=24% Similarity=0.274 Sum_probs=193.8
Q ss_pred CeecccCCeeeEEEEc-CCCcEEEEEEeecCCc---ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeCCCC
Q 003504 514 TLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGST---LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENG 589 (815)
Q Consensus 514 ~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~g 589 (815)
+.||+|+||.||+|.. .+|..||+|++..... .....+.+|++++++++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 4699999999999995 5689999999975322 22345678999999999999999999999999999999999999
Q ss_pred ChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCceE
Q 003504 590 NLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVY 669 (815)
Q Consensus 590 sL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NIl 669 (815)
+|..++.. ...+++.....++.|++.||+||| +.+|+||||||+|||
T Consensus 81 ~L~~~l~~------------------------------~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIl 127 (323)
T cd05595 81 ELFFHLSR------------------------------ERVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLM 127 (323)
T ss_pred cHHHHHHH------------------------------cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEE
Confidence 99988864 235778889999999999999999 889999999999999
Q ss_pred EcCCCCeeecccccceecCC-CCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCccccc
Q 003504 670 LDMNLEPRLSDFGLAKIFGN-GLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEG 748 (815)
Q Consensus 670 l~~~~~~kl~Dfgla~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~ 748 (815)
++.++.+||+|||+++.... ........||+.|+|||++.+.. ++.++|||||||++|||++|+.||......+
T Consensus 128 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~--- 202 (323)
T cd05595 128 LDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDND--YGRAVDWWGLGVVMYEMMCGRLPFYNQDHER--- 202 (323)
T ss_pred EcCCCCEEecccHHhccccCCCCccccccCCcCcCCcccccCCC--CCchhchhhhHHHHHHHHhCCCCCCCCCHHH---
Confidence 99999999999999876432 22233456999999999987665 6899999999999999999999997532211
Q ss_pred cHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCC-----CHHHHHH
Q 003504 749 NLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRP-----SMQQIVG 806 (815)
Q Consensus 749 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----s~~~v~~ 806 (815)
......... . ..+...+.++.+++.+||+.||++|| ++.++++
T Consensus 203 ----~~~~~~~~~-------~----~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 203 ----LFELILMEE-------I----RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred ----HHHHHhcCC-------C----CCCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 111111111 0 11334456788999999999999998 7888764
No 71
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=9.6e-38 Score=325.21 Aligned_cols=248 Identities=27% Similarity=0.422 Sum_probs=201.0
Q ss_pred CCCCCCeecccCCeeeEEEEcCCCcEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeCCC
Q 003504 509 NFDRGTLLAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMEN 588 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 588 (815)
+|++.+.||+|+||.||+|...++..+|+|.+... ......+.+|++++++++||||+++++++...+..++|+||+++
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREG-AMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMAN 83 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCCccEEEEEeccC-CCCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCC
Confidence 57788999999999999999887788999998653 33456788999999999999999999999999999999999999
Q ss_pred CChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCce
Q 003504 589 GNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSV 668 (815)
Q Consensus 589 gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NI 668 (815)
++|.++++.. ...++|..+..++.|++.||+||| +.+++||||||+||
T Consensus 84 ~~L~~~l~~~-----------------------------~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~ni 131 (256)
T cd05059 84 GCLLNYLRER-----------------------------KGKLGTEWLLDMCSDVCEAMEYLE---SNGFIHRDLAARNC 131 (256)
T ss_pred CCHHHHHHhc-----------------------------ccCCCHHHHHHHHHHHHHHHHHHH---HCCcccccccHhhE
Confidence 9999999752 225788999999999999999999 88999999999999
Q ss_pred EEcCCCCeeecccccceecCCCCcc--ccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCCcc
Q 003504 669 YLDMNLEPRLSDFGLAKIFGNGLDE--EIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GKKPLGDDYPEE 745 (815)
Q Consensus 669 ll~~~~~~kl~Dfgla~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~~ 745 (815)
+++.++.+||+|||+++........ ....++..|+|||.+.+.. ++.++||||||+++||+++ |+.||......+
T Consensus 132 ~i~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~--~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~ 209 (256)
T cd05059 132 LVGEDNVVKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDYSR--FSSKSDVWSFGVLMWEVFSEGKMPYERFSNSE 209 (256)
T ss_pred EECCCCcEEECCcccceecccccccccCCCCCCccccCHHHhccCC--CCchhhHHHHHHHHHHHhccCCCCCCCCCHHH
Confidence 9999999999999999866432211 1122345799999987665 6889999999999999999 899987532211
Q ss_pred ccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 003504 746 KEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLL 808 (815)
Q Consensus 746 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L 808 (815)
... .. ... .....+..++.++.+++.+||..+|++||+|.++++.|
T Consensus 210 ----~~~---~~-~~~---------~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 210 ----VVE---SV-SAG---------YRLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred ----HHH---HH-HcC---------CcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 111 11 111 11111233567899999999999999999999999887
No 72
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=1.5e-37 Score=325.73 Aligned_cols=253 Identities=26% Similarity=0.401 Sum_probs=203.9
Q ss_pred cCCCCCCeecccCCeeeEEEEcC----CCcEEEEEEeecCCcc-cHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEE
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFLP----GGIHVAVKVLVHGSTL-TDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAI 582 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv 582 (815)
++|++.+.||+|+||.||+|.+. +...||||.++..... ....|.+|+.++++++||||+++++++...+..++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv 83 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII 83 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence 56888999999999999999864 2457999988654332 345788999999999999999999999999999999
Q ss_pred EEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecc
Q 003504 583 YDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRD 662 (815)
Q Consensus 583 ~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrD 662 (815)
|||+++|+|.+++... ...+++..+.+++.|++.||+||| +.+|+|||
T Consensus 84 ~e~~~~~~L~~~~~~~-----------------------------~~~~~~~~~~~~~~~l~~~l~~Lh---~~~i~H~d 131 (266)
T cd05033 84 TEYMENGSLDKFLREN-----------------------------DGKFTVGQLVGMLRGIASGMKYLS---EMNYVHRD 131 (266)
T ss_pred EEcCCCCCHHHHHHhc-----------------------------cCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCC
Confidence 9999999999999752 235789999999999999999999 89999999
Q ss_pred CCCCceEEcCCCCeeecccccceecCCCC---ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CCCCC
Q 003504 663 IKASSVYLDMNLEPRLSDFGLAKIFGNGL---DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GKKPL 738 (815)
Q Consensus 663 lk~~NIll~~~~~~kl~Dfgla~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~ 738 (815)
|||+||++++++.+||+|||+++...... ......++..|+|||.+.... ++.++||||||+++||+++ |..||
T Consensus 132 i~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~--~~~~~Dv~slG~~l~~l~~~g~~p~ 209 (266)
T cd05033 132 LAARNILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRK--FTSASDVWSFGIVMWEVMSYGERPY 209 (266)
T ss_pred CCcceEEEcCCCCEEECccchhhcccccccceeccCCCCCccccChhhhccCC--CccccchHHHHHHHHHHHccCCCCC
Confidence 99999999999999999999998775221 111223467899999987655 7889999999999999998 99998
Q ss_pred CCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhh
Q 003504 739 GDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDI 811 (815)
Q Consensus 739 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 811 (815)
...... .+... ..... ....+..++..+.+++.+||+.+|++||++++|++.|+++
T Consensus 210 ~~~~~~----~~~~~----~~~~~---------~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 210 WDMSNQ----DVIKA----VEDGY---------RLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred CCCCHH----HHHHH----HHcCC---------CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 643211 11111 11110 0011234556789999999999999999999999999875
No 73
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=8.2e-38 Score=325.66 Aligned_cols=250 Identities=26% Similarity=0.378 Sum_probs=201.8
Q ss_pred cCCCCCCeecccCCeeeEEEEcCCCcEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeCC
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYME 587 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 587 (815)
++|.+.+.||+|+||.||+|...++..||||.+... ......+.+|+.++.+++||||+++++++...+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS 82 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCC-cccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence 457778999999999999999877778999988653 3445679999999999999999999999998888999999999
Q ss_pred CCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCc
Q 003504 588 NGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASS 667 (815)
Q Consensus 588 ~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~N 667 (815)
+|+|.+++... ...+++..+++++.|++.||+||| +.+++||||||+|
T Consensus 83 ~~~l~~~i~~~-----------------------------~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~n 130 (256)
T cd05113 83 NGCLLNYLREH-----------------------------GKRFQPSQLLEMCKDVCEGMAYLE---SKQFIHRDLAARN 130 (256)
T ss_pred CCcHHHHHHhc-----------------------------CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccCcce
Confidence 99999999652 225789999999999999999999 8899999999999
Q ss_pred eEEcCCCCeeecccccceecCCCCc--cccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCCc
Q 003504 668 VYLDMNLEPRLSDFGLAKIFGNGLD--EEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GKKPLGDDYPE 744 (815)
Q Consensus 668 Ill~~~~~~kl~Dfgla~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~ 744 (815)
|+++.++.+||+|||.++....... .....++..|+|||.+.+.. ++.++|||||||++|||++ |+.||......
T Consensus 131 ili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~--~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~ 208 (256)
T cd05113 131 CLVDDQGCVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLYSK--FSSKSDVWAFGVLMWEVYSLGKMPYERFNNS 208 (256)
T ss_pred EEEcCCCCEEECCCccceecCCCceeecCCCccChhhCCHHHHhcCc--ccchhHHHHHHHHHHHHhcCCCCCcCcCCHH
Confidence 9999999999999999986643321 11223567899999987655 6889999999999999999 99998643221
Q ss_pred cccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 003504 745 EKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLK 809 (815)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~ 809 (815)
... ........ ...+...+..+.+++.+||+.+|.+||++.++++.|+
T Consensus 209 ----~~~---~~~~~~~~----------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 209 ----ETV---EKVSQGLR----------LYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred ----HHH---HHHhcCCC----------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 111 11111110 0112223568899999999999999999999998774
No 74
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=4.3e-38 Score=340.58 Aligned_cols=244 Identities=20% Similarity=0.220 Sum_probs=197.7
Q ss_pred cCCCCCCeecccCCeeeEEEEcCC--CcEEEEEEeecCC---cccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEE
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFLPG--GIHVAVKVLVHGS---TLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAI 582 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~~~--~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv 582 (815)
++|++.+.||+|+||.||+|...+ +..||+|++.... ....+.+.+|+.+++.++||||+++++++.+....++|
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 109 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLV 109 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEE
Confidence 468888999999999999998532 3689999986532 22345678899999999999999999999999999999
Q ss_pred EEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecc
Q 003504 583 YDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRD 662 (815)
Q Consensus 583 ~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrD 662 (815)
|||+++|+|.+++.. ...+++.....++.|++.||+||| +.+|+|||
T Consensus 110 ~Ey~~~g~L~~~i~~------------------------------~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrD 156 (340)
T PTZ00426 110 LEFVIGGEFFTFLRR------------------------------NKRFPNDVGCFYAAQIVLIFEYLQ---SLNIVYRD 156 (340)
T ss_pred EeCCCCCcHHHHHHH------------------------------cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEccC
Confidence 999999999999965 234678888899999999999999 89999999
Q ss_pred CCCCceEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCC
Q 003504 663 IKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDY 742 (815)
Q Consensus 663 lk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~ 742 (815)
|||+|||++.++.+||+|||+++..... .....||+.|+|||++.+.. ++.++|||||||++|||++|+.||....
T Consensus 157 Lkp~NILl~~~~~ikL~DFG~a~~~~~~--~~~~~gt~~y~aPE~~~~~~--~~~~~DiwSlGvil~ell~G~~Pf~~~~ 232 (340)
T PTZ00426 157 LKPENLLLDKDGFIKMTDFGFAKVVDTR--TYTLCGTPEYIAPEILLNVG--HGKAADWWTLGIFIYEILVGCPPFYANE 232 (340)
T ss_pred CCHHHEEECCCCCEEEecCCCCeecCCC--cceecCChhhcCHHHHhCCC--CCccccccchhhHHHHHhcCCCCCCCCC
Confidence 9999999999999999999999876432 23456999999999987665 6889999999999999999999997543
Q ss_pred CccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCC-----CHHHHHH
Q 003504 743 PEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRP-----SMQQIVG 806 (815)
Q Consensus 743 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----s~~~v~~ 806 (815)
+... ........ ...+...+..+.+++.+|++.||++|+ +++++++
T Consensus 233 ~~~~-------~~~i~~~~-----------~~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~ 283 (340)
T PTZ00426 233 PLLI-------YQKILEGI-----------IYFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKE 283 (340)
T ss_pred HHHH-------HHHHhcCC-----------CCCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHc
Confidence 2111 11111111 011223345678999999999999995 8888865
No 75
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=5.4e-38 Score=333.04 Aligned_cols=264 Identities=19% Similarity=0.186 Sum_probs=199.4
Q ss_pred cCCCCCCeecccCCeeeEEEEcC-CCcEEEEEEeecCCc--ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEE
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFLP-GGIHVAVKVLVHGST--LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYD 584 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 584 (815)
++|++.+.||+|+||.||+|+.. +++.||||++..... ...+.+.+|++++++++||||+++++++...+..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 36888999999999999999964 678899999875322 234568899999999999999999999999999999999
Q ss_pred eCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCC
Q 003504 585 YMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIK 664 (815)
Q Consensus 585 y~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk 664 (815)
|++++.+..+... ...+++..+..++.|++.||+||| +.+|+|||||
T Consensus 81 ~~~~~~l~~~~~~------------------------------~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dlk 127 (287)
T cd07848 81 YVEKNMLELLEEM------------------------------PNGVPPEKVRSYIYQLIKAIHWCH---KNDIVHRDIK 127 (287)
T ss_pred cCCCCHHHHHHhc------------------------------CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCC
Confidence 9999777654422 234677888999999999999999 8999999999
Q ss_pred CCceEEcCCCCeeecccccceecCCCC--ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCC
Q 003504 665 ASSVYLDMNLEPRLSDFGLAKIFGNGL--DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDY 742 (815)
Q Consensus 665 ~~NIll~~~~~~kl~Dfgla~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~ 742 (815)
|+||+++.++.+||+|||+++...... ......|++.|+|||++.+.. ++.++|||||||++|||++|+.||....
T Consensus 128 p~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~DiwslGvil~el~~g~~pf~~~~ 205 (287)
T cd07848 128 PENLLISHNDVLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLGAP--YGKAVDMWSVGCILGELSDGQPLFPGES 205 (287)
T ss_pred HHHEEEcCCCcEEEeeccCcccccccccccccccccccccCCcHHHcCCC--CCCchhHHhHHHHHHHHHhCCCCCCCCC
Confidence 999999999999999999998765332 223346899999999987665 6889999999999999999999997633
Q ss_pred CccccccHHH--------HHHHHHhcCCCCccccccccC------CCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 743 PEEKEGNLVS--------WVRGLVRNNKGSRAIDPKIRD------TGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 743 ~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
..+....+.. +...............+.... ......+.++.+++.+|++.||++||+++++++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 206 EIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred HHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 2111111110 001000000000000011100 011224567999999999999999999999875
No 76
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=1.3e-37 Score=330.62 Aligned_cols=270 Identities=24% Similarity=0.334 Sum_probs=208.7
Q ss_pred cCCCCCCeecccCCeeeEEEEc------CCCcEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEE
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFL------PGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIA 581 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 581 (815)
.+|.+.+.||+|+||.||+|+. .++..||+|.+........+.+.+|++++++++||||+++++++......++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM 84 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence 3577789999999999999974 2356699999876555555679999999999999999999999999999999
Q ss_pred EEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeec
Q 003504 582 IYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHR 661 (815)
Q Consensus 582 v~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHr 661 (815)
||||+++|+|.+++.......... .+.. .......++|..+++++.|++.||+||| +.+++||
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~--------~~~~------~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~ 147 (291)
T cd05094 85 VFEYMKHGDLNKFLRAHGPDAMIL--------VDGQ------PRQAKGELGLSQMLHIASQIASGMVYLA---SQHFVHR 147 (291)
T ss_pred EEecCCCCcHHHHHHhcCcccccc--------cccc------cccCcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeec
Confidence 999999999999997532110000 0000 0011235789999999999999999999 8999999
Q ss_pred cCCCCceEEcCCCCeeecccccceecCCCCc---cccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CCCC
Q 003504 662 DIKASSVYLDMNLEPRLSDFGLAKIFGNGLD---EEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GKKP 737 (815)
Q Consensus 662 Dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p 737 (815)
||||+||+++.++.+||+|||+++....... .....++..|+|||.+.+.. ++.++|||||||++|||++ |+.|
T Consensus 148 dlkp~Nil~~~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~Di~slG~il~el~t~g~~p 225 (291)
T cd05094 148 DLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRK--FTTESDVWSFGVILWEIFTYGKQP 225 (291)
T ss_pred ccCcceEEEccCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCC--CCchhhHHHHHHHHHHHHhCCCCC
Confidence 9999999999999999999999986543221 12334678899999887665 7889999999999999999 9999
Q ss_pred CCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhhhh
Q 003504 738 LGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDIES 813 (815)
Q Consensus 738 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~~ 813 (815)
|......+ . ... ..... ....+..++..+.+++.+||+.+|++||++++|+++|+++..
T Consensus 226 ~~~~~~~~----~---~~~-~~~~~---------~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~ 284 (291)
T cd05094 226 WFQLSNTE----V---IEC-ITQGR---------VLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGK 284 (291)
T ss_pred CCCCCHHH----H---HHH-HhCCC---------CCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHh
Confidence 87533211 1 111 11111 001123345678999999999999999999999999999854
No 77
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=1e-37 Score=336.64 Aligned_cols=240 Identities=23% Similarity=0.271 Sum_probs=194.3
Q ss_pred CeecccCCeeeEEEEc-CCCcEEEEEEeecCC---cccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeCCCC
Q 003504 514 TLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGS---TLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENG 589 (815)
Q Consensus 514 ~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~g 589 (815)
+.||+|+||.||+|.. .+++.||||++.... ......+.+|+.+++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999985 568999999997532 223356788999999999999999999999999999999999999
Q ss_pred ChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCceE
Q 003504 590 NLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVY 669 (815)
Q Consensus 590 sL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NIl 669 (815)
+|..++.. ...+++.....++.|++.||+||| +.+|+||||||+|||
T Consensus 81 ~L~~~l~~------------------------------~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDikp~NIl 127 (328)
T cd05593 81 ELFFHLSR------------------------------ERVFSEDRTRFYGAEIVSALDYLH---SGKIVYRDLKLENLM 127 (328)
T ss_pred CHHHHHHh------------------------------cCCCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeE
Confidence 99988864 235778889999999999999999 899999999999999
Q ss_pred EcCCCCeeecccccceecCCC-CccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCccccc
Q 003504 670 LDMNLEPRLSDFGLAKIFGNG-LDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEG 748 (815)
Q Consensus 670 l~~~~~~kl~Dfgla~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~ 748 (815)
++.++.+||+|||+++..... .......||+.|+|||++.+.. ++.++|||||||++|||++|+.||......
T Consensus 128 l~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DiwslGvil~elltG~~Pf~~~~~~---- 201 (328)
T cd05593 128 LDKDGHIKITDFGLCKEGITDAATMKTFCGTPEYLAPEVLEDND--YGRAVDWWGLGVVMYEMMCGRLPFYNQDHE---- 201 (328)
T ss_pred ECCCCcEEEecCcCCccCCCcccccccccCCcCccChhhhcCCC--CCccCCccccchHHHHHhhCCCCCCCCCHH----
Confidence 999999999999998764322 2233456999999999987665 689999999999999999999999753221
Q ss_pred cHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCC-----CHHHHHH
Q 003504 749 NLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRP-----SMQQIVG 806 (815)
Q Consensus 749 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----s~~~v~~ 806 (815)
.......... . ..+...+.++.+++.+|++.||++|| ++.++++
T Consensus 202 ---~~~~~~~~~~-------~----~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~ 250 (328)
T cd05593 202 ---KLFELILMED-------I----KFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMR 250 (328)
T ss_pred ---HHHHHhccCC-------c----cCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhc
Confidence 1111111110 1 11233456788999999999999997 8888875
No 78
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=1.9e-37 Score=323.80 Aligned_cols=251 Identities=26% Similarity=0.396 Sum_probs=202.8
Q ss_pred cCCCCCCeecccCCeeeEEEEcCCCcEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeCC
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYME 587 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 587 (815)
++|++.+.||+|+||.||+|...++..||+|.+... ....+.+.+|+.++++++|||++++++++. ....++||||++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~ 83 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPG-TMSPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYMS 83 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCCceeEEEEecCC-CCCHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEecC
Confidence 468888999999999999999888889999998763 334567999999999999999999999875 456789999999
Q ss_pred CCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCc
Q 003504 588 NGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASS 667 (815)
Q Consensus 588 ~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~N 667 (815)
+|+|.++++.. ....+++..+..++.|++.||+||| +.+++||||||+|
T Consensus 84 ~~~L~~~~~~~----------------------------~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~di~p~N 132 (260)
T cd05070 84 KGSLLDFLKDG----------------------------EGRALKLPNLVDMAAQVAAGMAYIE---RMNYIHRDLRSAN 132 (260)
T ss_pred CCcHHHHHHhc----------------------------CCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccce
Confidence 99999999752 1335789999999999999999999 7899999999999
Q ss_pred eEEcCCCCeeecccccceecCCCCcc--ccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCCc
Q 003504 668 VYLDMNLEPRLSDFGLAKIFGNGLDE--EIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GKKPLGDDYPE 744 (815)
Q Consensus 668 Ill~~~~~~kl~Dfgla~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~ 744 (815)
|++++++.+||+|||++......... ....++..|+|||.+.... ++.++||||||+++||+++ |+.||.+....
T Consensus 133 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~ 210 (260)
T cd05070 133 ILVGDGLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR--FTIKSDVWSFGILLTELVTKGRVPYPGMNNR 210 (260)
T ss_pred EEEeCCceEEeCCceeeeeccCcccccccCCCCCccccChHHHhcCC--CcchhhhHHHHHHHHHHHhcCCCCCCCCCHH
Confidence 99999999999999999876543211 1223566899999887655 6889999999999999999 88898653211
Q ss_pred cccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHh
Q 003504 745 EKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKD 810 (815)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~ 810 (815)
......... .....+...+.++.+++.+|+..+|++|||+.++.+.|++
T Consensus 211 -------~~~~~~~~~----------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 211 -------EVLEQVERG----------YRMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred -------HHHHHHHcC----------CCCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 111111111 1111233456689999999999999999999999999875
No 79
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=5e-37 Score=321.96 Aligned_cols=260 Identities=23% Similarity=0.366 Sum_probs=207.8
Q ss_pred cCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCC---cccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEE
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGS---TLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIY 583 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 583 (815)
++|++.+.||+|+||.||+|+. .+++.||||.+.... ......+.+|++++++++||||+++++++.+.+..++|+
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 4788899999999999999995 478999999876422 222356889999999999999999999999999999999
Q ss_pred EeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccC
Q 003504 584 DYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDI 663 (815)
Q Consensus 584 ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDl 663 (815)
||+++|+|.+++.... .....++......++.|++.||+||| +.+++||||
T Consensus 82 e~~~~~~L~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl 132 (267)
T cd08228 82 ELADAGDLSQMIKYFK--------------------------KQKRLIPERTVWKYFVQLCSAVEHMH---SRRVMHRDI 132 (267)
T ss_pred EecCCCcHHHHHHHhh--------------------------hccCCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCC
Confidence 9999999999986421 11234677888999999999999999 899999999
Q ss_pred CCCceEEcCCCCeeecccccceecCCCCc-cccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCC
Q 003504 664 KASSVYLDMNLEPRLSDFGLAKIFGNGLD-EEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDY 742 (815)
Q Consensus 664 k~~NIll~~~~~~kl~Dfgla~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~ 742 (815)
||+||+++.++.++|+|||++........ .....|+..|+|||.+.+.. ++.++||||||+++|||++|+.||....
T Consensus 133 ~~~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~--~~~~~Di~slG~~l~el~~g~~p~~~~~ 210 (267)
T cd08228 133 KPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENG--YNFKSDIWSLGCLLYEMAALQSPFYGDK 210 (267)
T ss_pred CHHHEEEcCCCCEEECccccceeccchhHHHhcCCCCccccChhhhccCC--CCchhhHHHHHHHHHHHhcCCCCCcccc
Confidence 99999999999999999999987653321 22345888999999987655 6889999999999999999999986432
Q ss_pred CccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhhh
Q 003504 743 PEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDIE 812 (815)
Q Consensus 743 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~ 812 (815)
. ....+..... .. ......+...+..+.+++.+||..+|++||++.+|++.+++++
T Consensus 211 ~-----~~~~~~~~~~-~~--------~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 211 M-----NLFSLCQKIE-QC--------DYPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred c-----cHHHHHHHHh-cC--------CCCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 1 1122222211 11 0111123445678999999999999999999999999998874
No 80
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=1.4e-37 Score=329.13 Aligned_cols=251 Identities=24% Similarity=0.246 Sum_probs=201.0
Q ss_pred CCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCc---ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEE
Q 003504 509 NFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGST---LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYD 584 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 584 (815)
+|+..+.||+|+||.||++.. .+++.||||.+..... .....+.+|+.++++++||||+++++++.+++..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 367789999999999999995 5688999999865322 123457789999999999999999999999999999999
Q ss_pred eCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCC
Q 003504 585 YMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIK 664 (815)
Q Consensus 585 y~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk 664 (815)
|+++|+|.+++... ....+++.....++.|++.||+||| +.+++|||||
T Consensus 81 ~~~~~~L~~~~~~~----------------------------~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlk 129 (285)
T cd05605 81 LMNGGDLKFHIYNM----------------------------GNPGFDEERAVFYAAEITCGLEDLH---RERIVYRDLK 129 (285)
T ss_pred ccCCCcHHHHHHhc----------------------------CcCCCCHHHHHHHHHHHHHHHHHHH---HCCcEecCCC
Confidence 99999999888642 1235788899999999999999999 7899999999
Q ss_pred CCceEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCc
Q 003504 665 ASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPE 744 (815)
Q Consensus 665 ~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~ 744 (815)
|+||++++++.++|+|||+++............|+..|+|||++.+.. ++.++|||||||++||+++|+.||.+....
T Consensus 130 p~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~Diws~G~~l~el~~g~~pf~~~~~~ 207 (285)
T cd05605 130 PENILLDDYGHIRISDLGLAVEIPEGETIRGRVGTVGYMAPEVVKNER--YTFSPDWWGLGCLIYEMIEGKSPFRQRKEK 207 (285)
T ss_pred HHHEEECCCCCEEEeeCCCceecCCCCccccccCCCCccCcHHhcCCC--CCccccchhHHHHHHHHHHCCCCCCCCchh
Confidence 999999999999999999998765444434456899999999987655 688999999999999999999999753322
Q ss_pred cccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCC-----CHHHHHH
Q 003504 745 EKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRP-----SMQQIVG 806 (815)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----s~~~v~~ 806 (815)
... ..+....... ....+...+..+.+++.+||..||++|| +++++++
T Consensus 208 ~~~----~~~~~~~~~~----------~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05605 208 VKR----EEVERRVKED----------QEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKA 260 (285)
T ss_pred hHH----HHHHHHhhhc----------ccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhc
Confidence 111 1111111110 0112334566789999999999999999 7888854
No 81
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=2.1e-37 Score=326.86 Aligned_cols=254 Identities=21% Similarity=0.314 Sum_probs=198.8
Q ss_pred cCCCCCCeecccCCeeeEEEEc-CCCc----EEEEEEeecCCc-ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEE
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFL-PGGI----HVAVKVLVHGST-LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIA 581 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~----~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 581 (815)
++|.+.+.||+|+||.||+|.+ .++. .||+|.+..... ....++..|+.++++++||||++++|++.. ...++
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~ 85 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQL 85 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccEE
Confidence 4677889999999999999985 3444 477887754322 223567888889999999999999998754 45778
Q ss_pred EEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeec
Q 003504 582 IYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHR 661 (815)
Q Consensus 582 v~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHr 661 (815)
++||+++|+|.++++.. ...++|.....++.|++.||+||| +.+++||
T Consensus 86 i~e~~~~gsL~~~l~~~-----------------------------~~~~~~~~~~~i~~qi~~~l~~lH---~~~iiH~ 133 (279)
T cd05111 86 VTQLSPLGSLLDHVRQH-----------------------------RDSLDPQRLLNWCVQIAKGMYYLE---EHRMVHR 133 (279)
T ss_pred EEEeCCCCcHHHHHHhc-----------------------------ccCCCHHHHHHHHHHHHHHHHHHH---HCCEecc
Confidence 99999999999999752 235789999999999999999999 7899999
Q ss_pred cCCCCceEEcCCCCeeecccccceecCCCCc---cccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CCCC
Q 003504 662 DIKASSVYLDMNLEPRLSDFGLAKIFGNGLD---EEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GKKP 737 (815)
Q Consensus 662 Dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p 737 (815)
||||+||+++.++.+||+|||+++....... .....++..|+|||.+.... ++.++|||||||++||+++ |+.|
T Consensus 134 dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~--~~~~~Dv~slG~il~el~t~g~~p 211 (279)
T cd05111 134 NLAARNILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGR--YTHQSDVWSYGVTVWEMMSYGAEP 211 (279)
T ss_pred ccCcceEEEcCCCcEEEcCCccceeccCCCcccccCCCCCcccccCHHHhccCC--cCchhhHHHHHHHHHHHHcCCCCC
Confidence 9999999999999999999999987643321 22334677899999987665 7899999999999999998 9999
Q ss_pred CCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhhhh
Q 003504 738 LGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDIES 813 (815)
Q Consensus 738 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~~ 813 (815)
|.+..+.+ +.+ ..... ..... +..+..++.+++.+||..+|++||++.++++.|..+..
T Consensus 212 ~~~~~~~~----~~~----~~~~~--~~~~~-------~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~ 270 (279)
T cd05111 212 YAGMRPHE----VPD----LLEKG--ERLAQ-------PQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMAR 270 (279)
T ss_pred CCCCCHHH----HHH----HHHCC--CcCCC-------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHh
Confidence 97533211 111 11111 11111 22234567889999999999999999999999988654
No 82
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-39 Score=306.31 Aligned_cols=250 Identities=24% Similarity=0.314 Sum_probs=204.1
Q ss_pred cCCCCCCeecccCCeeeEEEE-cCCCcEEEEEEeecC--CcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEE
Q 003504 508 SNFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHG--STLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYD 584 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 584 (815)
+.|++.+.||+|+|+.||++. ..+|+.+|+|++.-. .....+++++|+.|.+.++|||||++.....+....++|+|
T Consensus 11 d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe 90 (355)
T KOG0033|consen 11 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD 90 (355)
T ss_pred hhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEe
Confidence 457777899999999999998 467999999987532 33467889999999999999999999999999899999999
Q ss_pred eCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCC
Q 003504 585 YMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIK 664 (815)
Q Consensus 585 y~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk 664 (815)
+|.+|+|..-+-+ ....+....-....||+++|.|+| ..+|||||+|
T Consensus 91 ~m~G~dl~~eIV~------------------------------R~~ySEa~aSH~~rQiLeal~yCH---~n~IvHRDvk 137 (355)
T KOG0033|consen 91 LVTGGELFEDIVA------------------------------REFYSEADASHCIQQILEALAYCH---SNGIVHRDLK 137 (355)
T ss_pred cccchHHHHHHHH------------------------------HHHHHHHHHHHHHHHHHHHHHHHH---hcCceeccCC
Confidence 9999999776643 123445556678899999999999 8999999999
Q ss_pred CCceEEcCC---CCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCC
Q 003504 665 ASSVYLDMN---LEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDD 741 (815)
Q Consensus 665 ~~NIll~~~---~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~ 741 (815)
|+|+++-.. --+|++|||+|..++.+......+|||+|||||++.... ++..+|||+.||++|-++.|..||.+.
T Consensus 138 P~nllLASK~~~A~vKL~~FGvAi~l~~g~~~~G~~GtP~fmaPEvvrkdp--y~kpvDiW~cGViLfiLL~G~~PF~~~ 215 (355)
T KOG0033|consen 138 PENLLLASKAKGAAVKLADFGLAIEVNDGEAWHGFAGTPGYLSPEVLKKDP--YSKPVDIWACGVILYILLVGYPPFWDE 215 (355)
T ss_pred hhheeeeeccCCCceeecccceEEEeCCccccccccCCCcccCHHHhhcCC--CCCcchhhhhhHHHHHHHhCCCCCCCc
Confidence 999999633 348999999999999777778889999999999998887 799999999999999999999999875
Q ss_pred CCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 742 YPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 742 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
..+...+.+. .. . -.+.+.......++..+++++|+..||.+|.|+.|.++
T Consensus 216 ~~~rlye~I~-------~g---~----yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 216 DQHRLYEQIK-------AG---A----YDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALK 266 (355)
T ss_pred cHHHHHHHHh-------cc---c----cCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence 4433322222 11 1 11222234456678899999999999999999998864
No 83
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=1.7e-37 Score=327.92 Aligned_cols=266 Identities=26% Similarity=0.358 Sum_probs=207.0
Q ss_pred hcCCCCCCeecccCCeeeEEEEcC------CCcEEEEEEeecCCcc-cHHHHHHHHHHhcCCCCCCceeeeeEEEeCCee
Q 003504 507 TSNFDRGTLLAEGKFGPVYRGFLP------GGIHVAVKVLVHGSTL-TDQEAARELEYLGRIKHPNLVPLTGYCIAGDQR 579 (815)
Q Consensus 507 ~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 579 (815)
.++|.+.+.||+|+||.||+|... ++..||||.+...... ..+.+.+|++++++++||||+++++++......
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 83 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPP 83 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCe
Confidence 346778899999999999999863 3478999998764443 356899999999999999999999999999999
Q ss_pred EEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCee
Q 003504 580 IAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPII 659 (815)
Q Consensus 580 ~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~iv 659 (815)
++||||+++|+|.++++........ ..........+.+.....++.|++.|++||| +.+++
T Consensus 84 ~lv~e~~~~~~L~~~i~~~~~~~~~----------------~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH---~~~i~ 144 (280)
T cd05049 84 IMVFEYMEHGDLNKFLRSHGPDAAF----------------LKSPDSPMGELTLSQLLQIAVQIASGMVYLA---SQHFV 144 (280)
T ss_pred EEEEecCCCCCHHHHHHhcCCchhh----------------hcccccccccccHHHHHHHHHHHHHHHHHHh---hCCee
Confidence 9999999999999999753211000 0000122445789999999999999999999 88999
Q ss_pred eccCCCCceEEcCCCCeeecccccceecCCCC---ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CC
Q 003504 660 HRDIKASSVYLDMNLEPRLSDFGLAKIFGNGL---DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GK 735 (815)
Q Consensus 660 HrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~ 735 (815)
||||||+||+++.++.+||+|||+++...... ......+++.|+|||++.+.. ++.++|||||||++|||++ |+
T Consensus 145 h~dlkp~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~Di~slG~il~e~~~~g~ 222 (280)
T cd05049 145 HRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRK--FTTESDVWSFGVVLWEIFTYGK 222 (280)
T ss_pred ccccccceEEEcCCCeEEECCcccceecccCcceecCCCCcccceecChhhhccCC--cchhhhHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999998653322 122334577899999987665 7889999999999999998 99
Q ss_pred CCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHh
Q 003504 736 KPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKD 810 (815)
Q Consensus 736 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~ 810 (815)
.||.....++ ... ... .... ...+...+.++.+++.+||..||++||++.||++.|++
T Consensus 223 ~p~~~~~~~~----~~~---~~~-~~~~---------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~ 280 (280)
T cd05049 223 QPWYGLSNEE----VIE---CIT-QGRL---------LQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK 280 (280)
T ss_pred CCCCCCCHHH----HHH---HHH-cCCc---------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence 9987533221 111 111 1110 11123455678999999999999999999999999863
No 84
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.4e-38 Score=336.39 Aligned_cols=242 Identities=27% Similarity=0.334 Sum_probs=201.9
Q ss_pred HhcCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCccc---HHHHHHHHHHhcCC-CCCCceeeeeEEEeCCeeE
Q 003504 506 ATSNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGSTLT---DQEAARELEYLGRI-KHPNLVPLTGYCIAGDQRI 580 (815)
Q Consensus 506 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~---~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~ 580 (815)
..++|...++||+|.||+|++|.. .++..+|||+++++.... .+..+.|-.|+... +||.++.++.++.+.+..+
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~ 445 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLF 445 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEE
Confidence 456899999999999999999995 457889999998875433 34455666666555 6999999999999999999
Q ss_pred EEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeee
Q 003504 581 AIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIH 660 (815)
Q Consensus 581 lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivH 660 (815)
.||||+.||++..+.+. ..++.....-+|..|+-||.||| +.+||+
T Consensus 446 fvmey~~Ggdm~~~~~~-------------------------------~~F~e~rarfyaAev~l~L~fLH---~~~IIY 491 (694)
T KOG0694|consen 446 FVMEYVAGGDLMHHIHT-------------------------------DVFSEPRARFYAAEVVLGLQFLH---ENGIIY 491 (694)
T ss_pred EEEEecCCCcEEEEEec-------------------------------ccccHHHHHHHHHHHHHHHHHHH---hcCcee
Confidence 99999999995555442 34666777789999999999999 899999
Q ss_pred ccCCCCceEEcCCCCeeecccccceecC-CCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCC
Q 003504 661 RDIKASSVYLDMNLEPRLSDFGLAKIFG-NGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLG 739 (815)
Q Consensus 661 rDlk~~NIll~~~~~~kl~Dfgla~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~ 739 (815)
||||.+|||+|.+|.+||+|||+++.-- .+....+.+||+.|||||++.+.. |+..+|+|||||+||||+.|..||.
T Consensus 492 RDlKLdNiLLD~eGh~kiADFGlcKe~m~~g~~TsTfCGTpey~aPEil~e~~--Yt~aVDWW~lGVLlyeML~Gq~PF~ 569 (694)
T KOG0694|consen 492 RDLKLDNLLLDTEGHVKIADFGLCKEGMGQGDRTSTFCGTPEFLAPEVLTEQS--YTRAVDWWGLGVLLYEMLVGESPFP 569 (694)
T ss_pred eecchhheEEcccCcEEecccccccccCCCCCccccccCChhhcChhhhccCc--ccchhhHHHHHHHHHHHHcCCCCCC
Confidence 9999999999999999999999999754 667788899999999999999887 8999999999999999999999999
Q ss_pred CCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCH
Q 003504 740 DDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSM 801 (815)
Q Consensus 740 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~ 801 (815)
+++.++.-..+. .. + ...|...+.+..+++.+.+.++|++|.-+
T Consensus 570 gddEee~FdsI~-------~d-------~----~~yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 570 GDDEEEVFDSIV-------ND-------E----VRYPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred CCCHHHHHHHHh-------cC-------C----CCCCCcccHHHHHHHHHHhccCcccccCC
Confidence 765544433322 11 1 12256677889999999999999999865
No 85
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=2.7e-37 Score=322.94 Aligned_cols=252 Identities=25% Similarity=0.390 Sum_probs=202.6
Q ss_pred cCCCCCCeecccCCeeeEEEEcCCCcEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeCC
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYME 587 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 587 (815)
++|.+.+.||+|+||.||+|+..++..||+|.+... ....+.+.+|++++++++||||+++++++. ....++||||++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~ 83 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMS 83 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccC-ccCHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEcCC
Confidence 468889999999999999999877778999998753 334567899999999999999999999874 456789999999
Q ss_pred CCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCc
Q 003504 588 NGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASS 667 (815)
Q Consensus 588 ~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~N 667 (815)
+|+|.++++.. ....++|..+..++.|++.||+||| +.+++||||||+|
T Consensus 84 ~~~L~~~~~~~----------------------------~~~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~N 132 (262)
T cd05071 84 KGSLLDFLKGE----------------------------MGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAAN 132 (262)
T ss_pred CCcHHHHHhhc----------------------------cccCCCHHHHHHHHHHHHHHHHHHH---HCCccccccCccc
Confidence 99999999752 1235688999999999999999999 8899999999999
Q ss_pred eEEcCCCCeeecccccceecCCCCc--cccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCCc
Q 003504 668 VYLDMNLEPRLSDFGLAKIFGNGLD--EEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GKKPLGDDYPE 744 (815)
Q Consensus 668 Ill~~~~~~kl~Dfgla~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~ 744 (815)
|++++++.+||+|||.++....... .....++..|+|||...... ++.++||||||+++||+++ |+.||......
T Consensus 133 ill~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~--~~~~~DvwslG~~l~ellt~g~~p~~~~~~~ 210 (262)
T cd05071 133 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNR 210 (262)
T ss_pred EEEcCCCcEEeccCCceeeccccccccccCCcccceecCHhHhccCC--CCchhhHHHHHHHHHHHHcCCCCCCCCCChH
Confidence 9999999999999999987653321 12233567899999887655 6889999999999999999 88888653221
Q ss_pred cccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhh
Q 003504 745 EKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDI 811 (815)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 811 (815)
+ .. .... .. .....+...+..+.+++.+|++.+|++||+++++++.|++.
T Consensus 211 ~----~~---~~~~-~~---------~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 211 E----VL---DQVE-RG---------YRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred H----HH---HHHh-cC---------CCCCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 1 11 1111 10 01111334567889999999999999999999999999864
No 86
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=2.8e-37 Score=322.58 Aligned_cols=253 Identities=28% Similarity=0.472 Sum_probs=204.5
Q ss_pred hcCCCCCCeecccCCeeeEEEEcCCCcEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeC
Q 003504 507 TSNFDRGTLLAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYM 586 (815)
Q Consensus 507 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 586 (815)
.++|++.+.||+|+||.||+|...+++.||+|.+... ......+.+|+.++++++||||+++++++. .+..++||||+
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~ 82 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQG-SMSPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEYM 82 (260)
T ss_pred hHHceeeeeeccCccceEEeeecCCCceEEEEEecCC-CCcHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEcC
Confidence 3568889999999999999999888999999998753 345678999999999999999999999864 45789999999
Q ss_pred CCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCC
Q 003504 587 ENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKAS 666 (815)
Q Consensus 587 ~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~ 666 (815)
++|+|.+++... .+..+++..+..++.|++.||+||| +.+++||||||+
T Consensus 83 ~~~~L~~~~~~~----------------------------~~~~~~~~~~~~i~~~i~~al~~LH---~~~i~H~dl~p~ 131 (260)
T cd05067 83 ENGSLVDFLKTP----------------------------EGIKLTINKLIDMAAQIAEGMAFIE---RKNYIHRDLRAA 131 (260)
T ss_pred CCCCHHHHHHhc----------------------------CCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHH
Confidence 999999998652 2345788999999999999999999 889999999999
Q ss_pred ceEEcCCCCeeecccccceecCCCCc--cccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCC
Q 003504 667 SVYLDMNLEPRLSDFGLAKIFGNGLD--EEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GKKPLGDDYP 743 (815)
Q Consensus 667 NIll~~~~~~kl~Dfgla~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~ 743 (815)
||+++.++.++|+|||++........ .....++..|+|||.+.... ++.++|||||||++||+++ |+.||.+...
T Consensus 132 ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~--~~~~~Di~slG~~l~el~~~g~~p~~~~~~ 209 (260)
T cd05067 132 NILVSETLCCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT--FTIKSDVWSFGILLTEIVTYGRIPYPGMTN 209 (260)
T ss_pred hEEEcCCCCEEEccCcceeecCCCCcccccCCcccccccCHHHhccCC--cCcccchHHHHHHHHHHHhCCCCCCCCCCh
Confidence 99999999999999999987653221 12234567899999987665 6889999999999999999 9999975332
Q ss_pred ccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhh
Q 003504 744 EEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDI 811 (815)
Q Consensus 744 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 811 (815)
.+ .. ... ... .....+...+.++.+++.+||..+|++||+++++++.|+.+
T Consensus 210 ~~----~~---~~~-~~~---------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 260 (260)
T cd05067 210 PE----VI---QNL-ERG---------YRMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLEDF 260 (260)
T ss_pred HH----HH---HHH-HcC---------CCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhcC
Confidence 11 11 111 111 01111233456799999999999999999999999999753
No 87
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=2.2e-37 Score=327.68 Aligned_cols=265 Identities=24% Similarity=0.310 Sum_probs=201.5
Q ss_pred CCCCCeecccCCeeeEEEE-----cCCCcEEEEEEeecCCc-ccHHHHHHHHHHhcCCCCCCceeeeeEEEeC--CeeEE
Q 003504 510 FDRGTLLAEGKFGPVYRGF-----LPGGIHVAVKVLVHGST-LTDQEAARELEYLGRIKHPNLVPLTGYCIAG--DQRIA 581 (815)
Q Consensus 510 ~~~~~~ig~G~~g~Vy~~~-----~~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~l 581 (815)
|...+.||+|+||+||++. ..++..||+|.+..... .....+.+|++++++++||||+++++++... ...++
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQL 85 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEE
Confidence 4778999999999998865 24678899999875432 3456788999999999999999999998764 35789
Q ss_pred EEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeec
Q 003504 582 IYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHR 661 (815)
Q Consensus 582 v~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHr 661 (815)
||||+++|+|.+++... .+++..+..++.|++.||+||| +.+|+||
T Consensus 86 v~e~~~~~~l~~~~~~~-------------------------------~l~~~~~~~i~~~l~~~l~~lH---~~~i~H~ 131 (283)
T cd05080 86 IMEYVPLGSLRDYLPKH-------------------------------KLNLAQLLLFAQQICEGMAYLH---SQHYIHR 131 (283)
T ss_pred EecCCCCCCHHHHHHHc-------------------------------CCCHHHHHHHHHHHHHHHHHHH---HCCeecc
Confidence 99999999999998641 3789999999999999999999 8899999
Q ss_pred cCCCCceEEcCCCCeeecccccceecCCCCc----cccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCC
Q 003504 662 DIKASSVYLDMNLEPRLSDFGLAKIFGNGLD----EEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKP 737 (815)
Q Consensus 662 Dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p 737 (815)
||||+||+++.++.+||+|||+++....+.. .....++..|+|||.+.... .+.++||||||+++|||++|+.|
T Consensus 132 dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~--~~~~~Di~slG~~l~el~tg~~p 209 (283)
T cd05080 132 DLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENK--FSYASDVWSFGVTLYELLTHCDS 209 (283)
T ss_pred ccChheEEEcCCCcEEEeecccccccCCcchhhccCCCCCCCceeeCHhHhcccC--CCcccccHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999987654321 12223566799999887655 68899999999999999999999
Q ss_pred CCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhhh
Q 003504 738 LGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDIE 812 (815)
Q Consensus 738 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~ 812 (815)
|....... .....+...........+..+.......+..++.++.+++.+||+.+|++||+++++++.|+++.
T Consensus 210 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 210 KQSPPKKF--EEMIGPKQGQMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred CCCCcchh--hhhhcccccccchhhhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 86432110 00000000000000001111111122224456678999999999999999999999999999875
No 88
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.1e-38 Score=301.50 Aligned_cols=252 Identities=22% Similarity=0.337 Sum_probs=208.3
Q ss_pred cCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCcc----cH----HHHHHHHHHhcCC-CCCCceeeeeEEEeCC
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGSTL----TD----QEAARELEYLGRI-KHPNLVPLTGYCIAGD 577 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~----~~----~~~~~E~~~l~~l-~H~niv~l~g~~~~~~ 577 (815)
+.|...+.+|+|..++|.++.. .+|...|+|++...... .. +.-.+|+.||+++ .||+|+++.++++.+.
T Consensus 17 ~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~s 96 (411)
T KOG0599|consen 17 AKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDA 96 (411)
T ss_pred hhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcc
Confidence 4577788999999999998884 57889999998643221 11 3446799999999 5999999999999999
Q ss_pred eeEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCC
Q 003504 578 QRIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPP 657 (815)
Q Consensus 578 ~~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ 657 (815)
..++|+|.|+.|.|.++|.. ...++.+...+|+.|+.+|++||| ...
T Consensus 97 F~FlVFdl~prGELFDyLts------------------------------~VtlSEK~tR~iMrqlfegVeylH---a~~ 143 (411)
T KOG0599|consen 97 FVFLVFDLMPRGELFDYLTS------------------------------KVTLSEKETRRIMRQLFEGVEYLH---ARN 143 (411)
T ss_pred hhhhhhhhcccchHHHHhhh------------------------------heeecHHHHHHHHHHHHHHHHHHH---Hhh
Confidence 99999999999999999964 446778888899999999999999 899
Q ss_pred eeeccCCCCceEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCCC----CCCCCcCcchhHHHHHHHHHh
Q 003504 658 IIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDS----DFPTPKSDVYCYGVVLLELIT 733 (815)
Q Consensus 658 ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~~~Dv~S~Gvvl~el~t 733 (815)
||||||||+|||+|++.++||+|||+|+.+.++......+||++|+|||.+.+.. ..|+...|+||+||+||.++.
T Consensus 144 IVHRDLKpENILlddn~~i~isDFGFa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLa 223 (411)
T KOG0599|consen 144 IVHRDLKPENILLDDNMNIKISDFGFACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLA 223 (411)
T ss_pred hhhcccChhheeeccccceEEeccceeeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHc
Confidence 9999999999999999999999999999999998888899999999999887543 226889999999999999999
Q ss_pred CCCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 734 GKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 734 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
|.+||... .++. ..+.++. .. -.+......+...++-+++.+|++.||.+|.|++|+++
T Consensus 224 GcpPFwHR------kQml-MLR~Ime-Gk------yqF~speWadis~~~KdLIsrlLqVdp~~Ritake~La 282 (411)
T KOG0599|consen 224 GCPPFWHR------KQML-MLRMIME-GK------YQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALA 282 (411)
T ss_pred CCCchhHH------HHHH-HHHHHHh-cc------cccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence 99999741 1111 1222222 11 12333445677888999999999999999999999975
No 89
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=1.5e-37 Score=339.35 Aligned_cols=248 Identities=24% Similarity=0.406 Sum_probs=193.2
Q ss_pred CCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCc-ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeC
Q 003504 509 NFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGST-LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYM 586 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 586 (815)
+|+..+.||+|+||.||+|+. .+++.||||++..... .....+.+|++++++++|+||+++++++...+..++||||+
T Consensus 75 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 154 (353)
T PLN00034 75 ELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFM 154 (353)
T ss_pred HHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecC
Confidence 455678999999999999995 4689999999865332 23467889999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCC
Q 003504 587 ENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKAS 666 (815)
Q Consensus 587 ~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~ 666 (815)
++|+|.... ...+.....++.|++.||+||| +.+||||||||+
T Consensus 155 ~~~~L~~~~----------------------------------~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~ 197 (353)
T PLN00034 155 DGGSLEGTH----------------------------------IADEQFLADVARQILSGIAYLH---RRHIVHRDIKPS 197 (353)
T ss_pred CCCcccccc----------------------------------cCCHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHH
Confidence 999986432 1234566789999999999999 889999999999
Q ss_pred ceEEcCCCCeeecccccceecCCCC-ccccccccccccCCcccCCCC---CCCCCcCcchhHHHHHHHHHhCCCCCCCCC
Q 003504 667 SVYLDMNLEPRLSDFGLAKIFGNGL-DEEIARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELITGKKPLGDDY 742 (815)
Q Consensus 667 NIll~~~~~~kl~Dfgla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~---~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~ 742 (815)
|||+++++.+||+|||+++...... ......||..|+|||.+.... .+.+.++|||||||++|||++|+.||....
T Consensus 198 NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~ 277 (353)
T PLN00034 198 NLLINSAKNVKIADFGVSRILAQTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGR 277 (353)
T ss_pred HEEEcCCCCEEEcccccceecccccccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCC
Confidence 9999999999999999998765332 223456999999999875421 224568999999999999999999997322
Q ss_pred CccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003504 743 PEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGL 807 (815)
Q Consensus 743 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~ 807 (815)
.. ............. ....+...+.++.+++.+||+.||++||++.|+++.
T Consensus 278 ~~----~~~~~~~~~~~~~----------~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 278 QG----DWASLMCAICMSQ----------PPEAPATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred Cc----cHHHHHHHHhccC----------CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 11 1111111111000 011133456678999999999999999999999863
No 90
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=4.1e-37 Score=332.70 Aligned_cols=200 Identities=23% Similarity=0.370 Sum_probs=171.5
Q ss_pred hcCCCCCCeecccCCeeeEEEEcC-CCcEEEEEEeecCC-cccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEE
Q 003504 507 TSNFDRGTLLAEGKFGPVYRGFLP-GGIHVAVKVLVHGS-TLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYD 584 (815)
Q Consensus 507 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 584 (815)
.++|++.+.||+|+||.||+|... ++..+|+|.+.... ......+.+|++++++++||||++++++|.+.+..++|||
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence 468999999999999999999964 68889999886542 2234578999999999999999999999999999999999
Q ss_pred eCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCC
Q 003504 585 YMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIK 664 (815)
Q Consensus 585 y~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk 664 (815)
|+++|+|.+++... ..+++.....++.+++.||+|||+ ..+|+|||||
T Consensus 84 ~~~~~~L~~~l~~~------------------------------~~~~~~~~~~~~~~l~~~l~~lH~--~~~ivH~dlk 131 (333)
T cd06650 84 HMDGGSLDQVLKKA------------------------------GRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVK 131 (333)
T ss_pred cCCCCcHHHHHHHc------------------------------CCCCHHHHHHHHHHHHHHHHHHHh--cCCEEecCCC
Confidence 99999999999642 246677888999999999999993 2479999999
Q ss_pred CCceEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCC
Q 003504 665 ASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDD 741 (815)
Q Consensus 665 ~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~ 741 (815)
|+|||++.++.+||+|||++...... ......|+..|+|||.+.+.. ++.++|||||||++||+++|+.||...
T Consensus 132 p~Nili~~~~~~kL~Dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~--~~~~~DvwslG~il~~l~~g~~p~~~~ 205 (333)
T cd06650 132 PSNILVNSRGEIKLCDFGVSGQLIDS-MANSFVGTRSYMSPERLQGTH--YSVQSDIWSMGLSLVEMAIGRYPIPPP 205 (333)
T ss_pred hhhEEEcCCCCEEEeeCCcchhhhhh-ccccCCCCccccCHHHhcCCC--CCcHHHHHHHHHHHHHHHHCCCCCCCc
Confidence 99999999999999999999765432 223346899999999987655 688999999999999999999999753
No 91
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=1.9e-37 Score=327.07 Aligned_cols=263 Identities=22% Similarity=0.325 Sum_probs=203.6
Q ss_pred HhcCCCCCCeecccCCeeeEEEEcC------CCcEEEEEEeecCCc-ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCe
Q 003504 506 ATSNFDRGTLLAEGKFGPVYRGFLP------GGIHVAVKVLVHGST-LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQ 578 (815)
Q Consensus 506 ~~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~ 578 (815)
++++|+..+.||+|+||.||+|... .+..||||.+..... ....++.+|+.+++.++||||+++++++.+...
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~ 83 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 83 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 4567999999999999999998743 356799998864322 234568899999999999999999999999899
Q ss_pred eEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCe
Q 003504 579 RIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPI 658 (815)
Q Consensus 579 ~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~i 658 (815)
.++||||+++|+|.++++....... ........+|..+..++.|++.||+||| +.++
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~ 140 (277)
T cd05062 84 TLVIMELMTRGDLKSYLRSLRPEME--------------------NNPVQAPPSLKKMIQMAGEIADGMAYLN---ANKF 140 (277)
T ss_pred eEEEEecCCCCCHHHHHHHcCcccc--------------------ccccccCCCHHHHHHHHHHHHHHHHHHH---HCCc
Confidence 9999999999999999975321100 0011235688899999999999999999 7899
Q ss_pred eeccCCCCceEEcCCCCeeecccccceecCCCCc---cccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-C
Q 003504 659 IHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLD---EEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-G 734 (815)
Q Consensus 659 vHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g 734 (815)
+||||||+||++++++.+||+|||+++....... .....++..|+|||++.... ++.++|||||||++|||++ |
T Consensus 141 vH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~Di~slG~~l~el~~~~ 218 (277)
T cd05062 141 VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGV--FTTYSDVWSFGVVLWEIATLA 218 (277)
T ss_pred ccCCcchheEEEcCCCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCC--cCchhHHHHHHHHHHHHHcCC
Confidence 9999999999999999999999999976543221 11223577899999987655 7899999999999999999 7
Q ss_pred CCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHh
Q 003504 735 KKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKD 810 (815)
Q Consensus 735 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~ 810 (815)
..||.....+ ... .... ..... ..+..++..+.+++.+||+.+|++||++.++++.|++
T Consensus 219 ~~p~~~~~~~----~~~---~~~~-~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 219 EQPYQGMSNE----QVL---RFVM-EGGLL---------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred CCCCCCCCHH----HHH---HHHH-cCCcC---------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 8888653221 111 1111 11100 1123345678999999999999999999999998864
No 92
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=3e-37 Score=339.34 Aligned_cols=288 Identities=24% Similarity=0.305 Sum_probs=209.4
Q ss_pred HHHhcCCCCCCeecccCCeeeEEEEcC------CCcEEEEEEeecCCcc-cHHHHHHHHHHhcCCC-CCCceeeeeEEEe
Q 003504 504 LSATSNFDRGTLLAEGKFGPVYRGFLP------GGIHVAVKVLVHGSTL-TDQEAARELEYLGRIK-HPNLVPLTGYCIA 575 (815)
Q Consensus 504 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~-H~niv~l~g~~~~ 575 (815)
....++|.+++.||+|+||.||+|++. .+..||||+++..... ..+.+.+|++++.++. ||||++++|+|..
T Consensus 33 ~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~ 112 (401)
T cd05107 33 EMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTK 112 (401)
T ss_pred eecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEcc
Confidence 334456888899999999999999853 3467999999754222 2346889999999997 9999999999999
Q ss_pred CCeeEEEEEeCCCCChhhhhccCCCCCccc-----cC----CCCCccc--------------------------------
Q 003504 576 GDQRIAIYDYMENGNLQNLLHDLPLGVQTT-----ED----WSTDTWE-------------------------------- 614 (815)
Q Consensus 576 ~~~~~lv~ey~~~gsL~~~l~~~~~~~~~~-----~~----~~~~~~~-------------------------------- 614 (815)
....++|+||+++|+|.++++..+...... .. .......
T Consensus 113 ~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (401)
T cd05107 113 GGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPM 192 (401)
T ss_pred CCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccch
Confidence 889999999999999999998643110000 00 0000000
Q ss_pred ---------------------------cCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCc
Q 003504 615 ---------------------------EDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASS 667 (815)
Q Consensus 615 ---------------------------~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~N 667 (815)
................++|....+++.|++.||+||| +.+++||||||+|
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrdlkp~N 269 (401)
T cd05107 193 QDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLA---SKNCVHRDLAARN 269 (401)
T ss_pred hcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHh---cCCcCcccCCcce
Confidence 0000000001122346789999999999999999999 8899999999999
Q ss_pred eEEcCCCCeeecccccceecCCCC---ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCC
Q 003504 668 VYLDMNLEPRLSDFGLAKIFGNGL---DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GKKPLGDDYP 743 (815)
Q Consensus 668 Ill~~~~~~kl~Dfgla~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~ 743 (815)
||+++++.+||+|||+++...... ......++..|+|||.+.... ++.++|||||||++|||++ |+.||.....
T Consensus 270 iLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~DvwslGvil~e~l~~g~~P~~~~~~ 347 (401)
T cd05107 270 VLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNL--YTTLSDVWSFGILLWEIFTLGGTPYPELPM 347 (401)
T ss_pred EEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCC--CCcHhHHHHHHHHHHHHHHcCCCCCCCCCc
Confidence 999999999999999998654322 112334678899999987655 6889999999999999998 8889864321
Q ss_pred ccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhhh
Q 003504 744 EEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDIE 812 (815)
Q Consensus 744 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~ 812 (815)
.+. ........ .+...+..++.++.+++.+||..+|++||++++|++.|+++.
T Consensus 348 ~~~-------~~~~~~~~---------~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 348 NEQ-------FYNAIKRG---------YRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred hHH-------HHHHHHcC---------CCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 111 11111111 111123345678999999999999999999999999999864
No 93
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=3e-37 Score=328.83 Aligned_cols=270 Identities=25% Similarity=0.366 Sum_probs=204.5
Q ss_pred cCCCCCCeecccCCeeeEEEEcCC-C--cEEEEEEeecCC-cccHHHHHHHHHHhcCC-CCCCceeeeeEEEeCCeeEEE
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFLPG-G--IHVAVKVLVHGS-TLTDQEAARELEYLGRI-KHPNLVPLTGYCIAGDQRIAI 582 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~~~-~--~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv 582 (815)
++|++.+.||+|+||.||+|+..+ + ..+|+|.++... ....+.+.+|++++.++ +||||+++++++......++|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 468889999999999999998643 3 347888876422 23346788999999999 799999999999998899999
Q ss_pred EEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecc
Q 003504 583 YDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRD 662 (815)
Q Consensus 583 ~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrD 662 (815)
+||+++|+|.++++........ ............+++.....++.|++.||+||| +.+|+|||
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~--------------~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH---~~~ivH~d 144 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETD--------------PAFAKEHGTASTLTSQQLLQFASDVATGMQYLS---EKQFIHRD 144 (297)
T ss_pred EEecCCCcHHHHHHhccccccc--------------cccccccCccCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCc
Confidence 9999999999999753211000 000000012345889999999999999999999 89999999
Q ss_pred CCCCceEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCC
Q 003504 663 IKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GKKPLGDD 741 (815)
Q Consensus 663 lk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~ 741 (815)
|||+||++++++.+||+|||++..............+..|+|||++.... ++.++|||||||++|||++ |..||...
T Consensus 145 lkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~DvwSlG~il~el~t~g~~pf~~~ 222 (297)
T cd05089 145 LAARNVLVGENLASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSV--YTTKSDVWSFGVLLWEIVSLGGTPYCGM 222 (297)
T ss_pred CCcceEEECCCCeEEECCcCCCccccceeccCCCCcCccccCchhhccCC--CCchhhHHHHHHHHHHHHcCCCCCCCCC
Confidence 99999999999999999999987543222222223356799999887665 6889999999999999998 99999753
Q ss_pred CCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhhhh
Q 003504 742 YPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDIES 813 (815)
Q Consensus 742 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~~ 813 (815)
...+ ....... ......+..++.++.+++.+||+.+|.+||+++++++.|+++.+
T Consensus 223 ~~~~-------~~~~~~~----------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~ 277 (297)
T cd05089 223 TCAE-------LYEKLPQ----------GYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLE 277 (297)
T ss_pred CHHH-------HHHHHhc----------CCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 3211 1111111 11111233455678999999999999999999999999988754
No 94
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.5e-37 Score=351.49 Aligned_cols=249 Identities=21% Similarity=0.257 Sum_probs=200.6
Q ss_pred CCCCCeecccCCeeeEEEEc-CC-CcEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeCC
Q 003504 510 FDRGTLLAEGKFGPVYRGFL-PG-GIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYME 587 (815)
Q Consensus 510 ~~~~~~ig~G~~g~Vy~~~~-~~-~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 587 (815)
|.+.+.||+|+||.||+|.. .+ +..||+|.+..........+.+|+.+++.++|||||++++++...+..++||||++
T Consensus 69 y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~~ 148 (478)
T PTZ00267 69 YVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGS 148 (478)
T ss_pred EEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECCC
Confidence 77789999999999999984 33 67889997755444445567889999999999999999999999999999999999
Q ss_pred CCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCc
Q 003504 588 NGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASS 667 (815)
Q Consensus 588 ~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~N 667 (815)
+|+|.++++... ....++++.....++.|++.||+||| +.+||||||||+|
T Consensus 149 gg~L~~~l~~~~--------------------------~~~~~l~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~N 199 (478)
T PTZ00267 149 GGDLNKQIKQRL--------------------------KEHLPFQEYEVGLLFYQIVLALDEVH---SRKMMHRDLKSAN 199 (478)
T ss_pred CCCHHHHHHHHH--------------------------hccCCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCcCHHh
Confidence 999999886421 11335778888999999999999999 8999999999999
Q ss_pred eEEcCCCCeeecccccceecCCCC---ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCc
Q 003504 668 VYLDMNLEPRLSDFGLAKIFGNGL---DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPE 744 (815)
Q Consensus 668 Ill~~~~~~kl~Dfgla~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~ 744 (815)
||++.++.+||+|||+++...... .....+||+.|+|||++.+.. ++.++|||||||++|||++|+.||.....
T Consensus 200 Ill~~~~~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~slG~~l~el~tg~~Pf~~~~~- 276 (478)
T PTZ00267 200 IFLMPTGIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWERKR--YSKKADMWSLGVILYELLTLHRPFKGPSQ- 276 (478)
T ss_pred EEECCCCcEEEEeCcCceecCCccccccccccCCCccccCHhHhCCCC--CCcHHhHHHHHHHHHHHHhCCCCCCCCCH-
Confidence 999999999999999998765432 123456999999999987765 78999999999999999999999975321
Q ss_pred cccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 745 EKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
...+........ + ..+...+.++.+++.+||..||++||++++++.
T Consensus 277 ------~~~~~~~~~~~~-----~-----~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 277 ------REIMQQVLYGKY-----D-----PFPCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred ------HHHHHHHHhCCC-----C-----CCCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 122222221110 0 112334567899999999999999999999864
No 95
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=3.8e-37 Score=321.47 Aligned_cols=252 Identities=27% Similarity=0.415 Sum_probs=202.2
Q ss_pred cCCCCCCeecccCCeeeEEEEcCCCcEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeCC
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYME 587 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 587 (815)
++|.+.+.||+|+||.||+|...++..||+|.+... ....+.+.+|++++++++|||++++++++. ....++||||++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~ 83 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPG-TMMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMG 83 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccC-CccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCC
Confidence 457788899999999999999877778999987653 334567899999999999999999999875 456789999999
Q ss_pred CCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCc
Q 003504 588 NGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASS 667 (815)
Q Consensus 588 ~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~N 667 (815)
+|+|.++++.. ....++|..+..++.|++.||+||| +.+++||||||+|
T Consensus 84 ~~~L~~~~~~~----------------------------~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~dl~~~N 132 (260)
T cd05069 84 KGSLLDFLKEG----------------------------DGKYLKLPQLVDMAAQIADGMAYIE---RMNYIHRDLRAAN 132 (260)
T ss_pred CCCHHHHHhhC----------------------------CCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccCcce
Confidence 99999999752 1335789999999999999999999 7899999999999
Q ss_pred eEEcCCCCeeecccccceecCCCCc--cccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCCc
Q 003504 668 VYLDMNLEPRLSDFGLAKIFGNGLD--EEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GKKPLGDDYPE 744 (815)
Q Consensus 668 Ill~~~~~~kl~Dfgla~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~ 744 (815)
|++++++.+||+|||+++....... .....++..|+|||...+.. ++.++|||||||++||+++ |+.||.+....
T Consensus 133 ill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~--~~~~~Di~slG~~l~el~t~g~~p~~~~~~~ 210 (260)
T cd05069 133 ILVGDNLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR--FTIKSDVWSFGILLTELVTKGRVPYPGMVNR 210 (260)
T ss_pred EEEcCCCeEEECCCccceEccCCcccccCCCccchhhCCHHHhccCC--cChHHHHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence 9999999999999999987643321 12233567899999887655 7889999999999999999 89998753221
Q ss_pred cccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhh
Q 003504 745 EKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDI 811 (815)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 811 (815)
+ ... ... .. .....+...+..+.+++.+||+.+|++||++++|++.|+++
T Consensus 211 ~----~~~---~~~-~~---------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 260 (260)
T cd05069 211 E----VLE---QVE-RG---------YRMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLEDY 260 (260)
T ss_pred H----HHH---HHH-cC---------CCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 1 111 111 11 01112334567899999999999999999999999999863
No 96
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=2.8e-37 Score=334.25 Aligned_cols=287 Identities=27% Similarity=0.344 Sum_probs=205.9
Q ss_pred hcCCCCCCeecccCCeeeEEEEcC------CCcEEEEEEeecCCcc-cHHHHHHHHHHhcCC-CCCCceeeeeEEEeC-C
Q 003504 507 TSNFDRGTLLAEGKFGPVYRGFLP------GGIHVAVKVLVHGSTL-TDQEAARELEYLGRI-KHPNLVPLTGYCIAG-D 577 (815)
Q Consensus 507 ~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~-~ 577 (815)
.++|.+.+.||+|+||.||+|... +++.||+|+++..... ..+.+.+|+.++.++ +||||++++++|... .
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~ 85 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGG 85 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCC
Confidence 346888999999999999999742 3478999998653322 235678899999999 799999999988754 4
Q ss_pred eeEEEEEeCCCCChhhhhccCCCCCc--ccc------------------------CCCCCccccCC-----CccccccCC
Q 003504 578 QRIAIYDYMENGNLQNLLHDLPLGVQ--TTE------------------------DWSTDTWEEDG-----TNSIQNVGS 626 (815)
Q Consensus 578 ~~~lv~ey~~~gsL~~~l~~~~~~~~--~~~------------------------~~~~~~~~~~~-----~~~~~~~~~ 626 (815)
..++++||+++|+|.+++........ ... +.....+.... .........
T Consensus 86 ~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (337)
T cd05054 86 PLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDEL 165 (337)
T ss_pred CEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHH
Confidence 67899999999999999965321100 000 00000000000 000000001
Q ss_pred CCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCceEEcCCCCeeecccccceecCCCC---cccccccccccc
Q 003504 627 EGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGL---DEEIARGSPGYI 703 (815)
Q Consensus 627 ~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~---~~~~~~gt~~y~ 703 (815)
....++|..+.+++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++.+.... ......++..|+
T Consensus 166 ~~~~l~~~~~~~~~~qi~~aL~~lH---~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~ 242 (337)
T cd05054 166 YKEPLTLEDLISYSFQVARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWM 242 (337)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCcccc
Confidence 1236899999999999999999999 8899999999999999999999999999998764322 112234567899
Q ss_pred CCcccCCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHH
Q 003504 704 PPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEE 782 (815)
Q Consensus 704 aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 782 (815)
|||++.+.. ++.++|||||||++||+++ |+.||.+....+ .+. ....... ....+.....+
T Consensus 243 aPE~~~~~~--~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~---~~~----~~~~~~~---------~~~~~~~~~~~ 304 (337)
T cd05054 243 APESIFDKV--YTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE---EFC----RRLKEGT---------RMRAPEYATPE 304 (337)
T ss_pred CcHHhcCCC--CCccccHHHHHHHHHHHHHcCCCCCCCCCccH---HHH----HHHhccC---------CCCCCccCCHH
Confidence 999987765 7899999999999999998 999997532211 111 1111110 11112334567
Q ss_pred HHHHHhhccccCCCCCCCHHHHHHHHHhhhhc
Q 003504 783 ALKIGYLCTADLPLKRPSMQQIVGLLKDIEST 814 (815)
Q Consensus 783 ~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~~~ 814 (815)
+.+++.+||+.+|++||++.++++.|+++.+.
T Consensus 305 ~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~~ 336 (337)
T cd05054 305 IYSIMLDCWHNNPEDRPTFSELVEILGDLLQE 336 (337)
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 89999999999999999999999999988654
No 97
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=2.5e-37 Score=333.27 Aligned_cols=240 Identities=22% Similarity=0.268 Sum_probs=192.5
Q ss_pred CeecccCCeeeEEEEc----CCCcEEEEEEeecCC----cccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEe
Q 003504 514 TLLAEGKFGPVYRGFL----PGGIHVAVKVLVHGS----TLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDY 585 (815)
Q Consensus 514 ~~ig~G~~g~Vy~~~~----~~~~~vavK~l~~~~----~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 585 (815)
+.||+|+||.||+++. .+++.||||++.... ......+.+|+.+++.++||||+++++++...+..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 6899999999999984 357889999987532 12234577899999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCC
Q 003504 586 MENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKA 665 (815)
Q Consensus 586 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~ 665 (815)
+++|+|.+++... ..+.+.....++.|++.||+||| +.+|+||||||
T Consensus 82 ~~~~~L~~~~~~~------------------------------~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp 128 (323)
T cd05584 82 LSGGELFMHLERE------------------------------GIFMEDTACFYLSEISLALEHLH---QQGIIYRDLKP 128 (323)
T ss_pred CCCchHHHHHHHc------------------------------CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCH
Confidence 9999999998642 24566777889999999999999 89999999999
Q ss_pred CceEEcCCCCeeecccccceecCCC-CccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCc
Q 003504 666 SSVYLDMNLEPRLSDFGLAKIFGNG-LDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPE 744 (815)
Q Consensus 666 ~NIll~~~~~~kl~Dfgla~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~ 744 (815)
+|||++.++.+||+|||+++..... .......||+.|+|||++.+.. ++.++|||||||++|||++|+.||.....
T Consensus 129 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DiwslG~il~ell~G~~pf~~~~~- 205 (323)
T cd05584 129 ENILLDAQGHVKLTDFGLCKESIHEGTVTHTFCGTIEYMAPEILMRSG--HGKAVDWWSLGALMYDMLTGAPPFTAENR- 205 (323)
T ss_pred HHeEECCCCCEEEeeCcCCeecccCCCcccccCCCccccChhhccCCC--CCCcceecccHHHHHHHhcCCCCCCCCCH-
Confidence 9999999999999999999754322 2233456999999999987665 68899999999999999999999975322
Q ss_pred cccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCC-----CHHHHHH
Q 003504 745 EKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRP-----SMQQIVG 806 (815)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----s~~~v~~ 806 (815)
........... ...+...+.++.+++.+||+.||++|| +++++++
T Consensus 206 ------~~~~~~~~~~~-----------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 206 ------KKTIDKILKGK-----------LNLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred ------HHHHHHHHcCC-----------CCCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 11122222111 011233456788999999999999999 7887765
No 98
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=2.7e-37 Score=326.92 Aligned_cols=268 Identities=22% Similarity=0.316 Sum_probs=204.3
Q ss_pred cCCCCCCeecccCCeeeEEEEc-----CCCcEEEEEEeecCCc-ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEE
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFL-----PGGIHVAVKVLVHGST-LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIA 581 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~-----~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 581 (815)
++|++.+.||+|+||.||+|+. .++..||+|.+..... .....+.+|++++++++||||+++++++......++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 84 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM 84 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence 3577789999999999999984 3567899999864322 233578899999999999999999999999999999
Q ss_pred EEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeec
Q 003504 582 IYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHR 661 (815)
Q Consensus 582 v~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHr 661 (815)
||||+++|+|.+++.......... +. ....+.....+++...+.++.|++.||+||| +.+++||
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~--~~-----------~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~ 148 (283)
T cd05090 85 LFEYLNQGDLHEFLIMRSPHSDVG--CS-----------SDEDGTVKSSLDHGDFLHIAIQIAAGMEYLS---SHFFVHK 148 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCCccc--cc-----------cccccccccccCHHHHHHHHHHHHHHHHHHH---hcCeehh
Confidence 999999999999996532110000 00 0001112345789999999999999999999 7899999
Q ss_pred cCCCCceEEcCCCCeeecccccceecCCCC---ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CCCC
Q 003504 662 DIKASSVYLDMNLEPRLSDFGLAKIFGNGL---DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GKKP 737 (815)
Q Consensus 662 Dlk~~NIll~~~~~~kl~Dfgla~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p 737 (815)
||||+||++++++.+||+|||+++...... ......++..|+|||++.+.. ++.++|||||||++|||++ |..|
T Consensus 149 dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~Dv~slG~il~el~~~g~~p 226 (283)
T cd05090 149 DLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGK--FSSDSDIWSFGVVLWEIFSFGLQP 226 (283)
T ss_pred ccccceEEEcCCCcEEeccccccccccCCcceecccCCCccceecChHHhccCC--CCchhhhHHHHHHHHHHHcCCCCC
Confidence 999999999999999999999998654322 122233567899999987655 6899999999999999999 9989
Q ss_pred CCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHh
Q 003504 738 LGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKD 810 (815)
Q Consensus 738 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~ 810 (815)
|....+. .+.. ...... ....+..++.++.+++.+||+.||++||++.+|.++|..
T Consensus 227 ~~~~~~~----~~~~----~~~~~~---------~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 227 YYGFSNQ----EVIE----MVRKRQ---------LLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred CCCCCHH----HHHH----HHHcCC---------cCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 8643211 1111 111111 011233455678999999999999999999999998864
No 99
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=1.4e-37 Score=329.24 Aligned_cols=262 Identities=24% Similarity=0.322 Sum_probs=202.0
Q ss_pred cCCCCCCeecccCCeeeEEEEc-----CCCcEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCceeeeeEEEeC--CeeE
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFL-----PGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAG--DQRI 580 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~-----~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~ 580 (815)
.+|.+.+.||+|+||.||+|.. .++..||+|.+........+.+.+|++++++++||||+++++++... ...+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 83 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR 83 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence 4677889999999999999974 35788999998765555566889999999999999999999988653 4678
Q ss_pred EEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeee
Q 003504 581 AIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIH 660 (815)
Q Consensus 581 lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivH 660 (815)
+|+||+++|+|.+++... ...++|..+..++.|++.||+||| +.+++|
T Consensus 84 lv~e~~~~~~L~~~l~~~-----------------------------~~~l~~~~~~~~~~~l~~aL~~LH---~~~i~H 131 (284)
T cd05081 84 LVMEYLPYGSLRDYLQKH-----------------------------RERLDHRKLLLYASQICKGMEYLG---SKRYVH 131 (284)
T ss_pred EEEEecCCCCHHHHHHhc-----------------------------CcCCCHHHHHHHHHHHHHHHHHHH---HCCcee
Confidence 999999999999999642 234789999999999999999999 889999
Q ss_pred ccCCCCceEEcCCCCeeecccccceecCCCCcc----ccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCC
Q 003504 661 RDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDE----EIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKK 736 (815)
Q Consensus 661 rDlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~ 736 (815)
|||||+||++++++.+||+|||+++........ ....++..|+|||.+.+.. ++.++|||||||++|||++|..
T Consensus 132 ~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~Di~slG~~l~el~~~~~ 209 (284)
T cd05081 132 RDLATRNILVESENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESK--FSVASDVWSFGVVLYELFTYSD 209 (284)
T ss_pred ccCCHhhEEECCCCeEEECCCcccccccCCCcceeecCCCCCceEeeCHHHhccCC--cChHHHHHHHHHHHHHHhhcCC
Confidence 999999999999999999999999876543211 1122345699999987655 6889999999999999999887
Q ss_pred CCCCCCCccc-------c-ccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 003504 737 PLGDDYPEEK-------E-GNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLL 808 (815)
Q Consensus 737 p~~~~~~~~~-------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L 808 (815)
|+........ . ............. ......+..++.++.+++.+||+.+|++||||.+|++.|
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l 280 (284)
T cd05081 210 KSCSPPAEFMRMMGNDKQGQMIVYHLIELLKN---------NGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQV 280 (284)
T ss_pred cCCCcchhhhhhcccccccccchHHHHHHHhc---------CCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHH
Confidence 7543211000 0 0001111111111 111112334567899999999999999999999999999
Q ss_pred Hhhh
Q 003504 809 KDIE 812 (815)
Q Consensus 809 ~~i~ 812 (815)
+.++
T Consensus 281 ~~~~ 284 (284)
T cd05081 281 EAIR 284 (284)
T ss_pred HhcC
Confidence 8763
No 100
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=5.7e-37 Score=322.60 Aligned_cols=256 Identities=27% Similarity=0.432 Sum_probs=200.5
Q ss_pred CCCCCeecccCCeeeEEEEcCC----CcEEEEEEeecCCc--ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCe-----
Q 003504 510 FDRGTLLAEGKFGPVYRGFLPG----GIHVAVKVLVHGST--LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQ----- 578 (815)
Q Consensus 510 ~~~~~~ig~G~~g~Vy~~~~~~----~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~----- 578 (815)
|.+++.||+|+||.||+|.... +..||||++..... .....+.+|++.++.++||||+++++++...+.
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 5678999999999999998532 36799999875322 234578899999999999999999999876554
Q ss_pred -eEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCC
Q 003504 579 -RIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPP 657 (815)
Q Consensus 579 -~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ 657 (815)
.++|+||+++|+|..++.....+ .....+++.....++.|++.||+||| +.+
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~------------------------~~~~~~~~~~~~~~~~~i~~aL~~lH---~~~ 133 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLG------------------------GLPEKLPLQTLLKFMVDIALGMEYLS---NRN 133 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhcc------------------------CCcccCCHHHHHHHHHHHHHHHHHHH---hCC
Confidence 68999999999999998653111 12335788899999999999999999 789
Q ss_pred eeeccCCCCceEEcCCCCeeecccccceecCCCCc---cccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-
Q 003504 658 IIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLD---EEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT- 733 (815)
Q Consensus 658 ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t- 733 (815)
++||||||+||++++++.+||+|||+++.+..... .....++..|+|||.+.... ++.++|||||||++|||++
T Consensus 134 i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~--~~~~~Dv~SlG~il~el~~~ 211 (273)
T cd05035 134 FIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRV--YTSKSDVWAFGVTMWEIATR 211 (273)
T ss_pred eeccccchheEEECCCCeEEECCccceeeccccccccccccccCCccccCHhhcccCC--CCcccchHHHHHHHHHHHhC
Confidence 99999999999999999999999999987653321 11223567899999986655 7899999999999999999
Q ss_pred CCCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhh
Q 003504 734 GKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDI 811 (815)
Q Consensus 734 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 811 (815)
|..||.+.... .+.++ .. ... ....+..++.++.+++.+||+.||++||++.++++.|+++
T Consensus 212 g~~p~~~~~~~----~~~~~---~~-~~~---------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 212 GQTPYPGVENH----EIYDY---LR-HGN---------RLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred CCCCCCCCCHH----HHHHH---HH-cCC---------CCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 88888653221 11111 11 111 0111334567899999999999999999999999999876
No 101
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=5.3e-37 Score=325.91 Aligned_cols=277 Identities=25% Similarity=0.353 Sum_probs=207.4
Q ss_pred CCCCCCeecccCCeeeEEEEcC------CCcEEEEEEeecCCc-ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEE
Q 003504 509 NFDRGTLLAEGKFGPVYRGFLP------GGIHVAVKVLVHGST-LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIA 581 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 581 (815)
+|++.+.||+|+||.||+|+.. +...||+|.+..... .....+.+|+.+++.++||||++++++|...+..++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence 4677899999999999999842 235789998865433 234578899999999999999999999999999999
Q ss_pred EEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeec
Q 003504 582 IYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHR 661 (815)
Q Consensus 582 v~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHr 661 (815)
|+||+++|+|.+++............ .+...............+++...+.++.|++.||+||| +.+++||
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH---~~~ivH~ 151 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLG------SDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLA---EMKLVHR 151 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccc------cccccccccccCccccccCHHHHHHHHHHHHHHHHHHH---HCCeehh
Confidence 99999999999999754221110000 00000000011122346889999999999999999999 8899999
Q ss_pred cCCCCceEEcCCCCeeecccccceecCCCCc---cccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CCCC
Q 003504 662 DIKASSVYLDMNLEPRLSDFGLAKIFGNGLD---EEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GKKP 737 (815)
Q Consensus 662 Dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p 737 (815)
||||+||++++++.+||+|||+++....... .....++..|+|||.+.+.. ++.++||||||+++|||++ |..|
T Consensus 152 dikp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~--~~~~~Di~slG~~l~el~t~g~~p 229 (290)
T cd05045 152 DLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHI--YTTQSDVWSFGVLLWEIVTLGGNP 229 (290)
T ss_pred hhhhheEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCC--cchHhHHHHHHHHHHHHHhcCCCC
Confidence 9999999999999999999999986533221 12233567899999887655 7899999999999999998 9999
Q ss_pred CCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhhhh
Q 003504 738 LGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDIES 813 (815)
Q Consensus 738 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~~ 813 (815)
|....++ .+..++ ... .....+...+.++.+++.+||+.+|++||++.++++.|+++-.
T Consensus 230 ~~~~~~~----~~~~~~----~~~---------~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 230 YPGIAPE----RLFNLL----KTG---------YRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred CCCCCHH----HHHHHH----hCC---------CCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 8653322 122211 111 1111233455678999999999999999999999999998754
No 102
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=1.3e-37 Score=347.89 Aligned_cols=265 Identities=20% Similarity=0.293 Sum_probs=195.8
Q ss_pred hcCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCceeeeeEEEeC--------C
Q 003504 507 TSNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAG--------D 577 (815)
Q Consensus 507 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--------~ 577 (815)
..+|.+.+.||+|+||.||+|+. .+++.||||++... .....+|+.++++++||||+++++++... .
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~----~~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 140 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQD----PQYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNI 140 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecC----cchHHHHHHHHHhcCCCCCcceeeeEeecccccCCCce
Confidence 45799999999999999999995 56889999988542 23346799999999999999999987542 1
Q ss_pred eeEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCC
Q 003504 578 QRIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPP 657 (815)
Q Consensus 578 ~~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ 657 (815)
..++||||+++ +|.+++.... .....+++.....++.|++.||+||| +.+
T Consensus 141 ~l~lvmE~~~~-~l~~~~~~~~--------------------------~~~~~l~~~~~~~~~~qi~~gL~yLH---~~~ 190 (440)
T PTZ00036 141 FLNVVMEFIPQ-TVHKYMKHYA--------------------------RNNHALPLFLVKLYSYQLCRALAYIH---SKF 190 (440)
T ss_pred EEEEEEecCCc-cHHHHHHHHh--------------------------hcCCCCCHHHHHHHHHHHHHHHHHHH---HCC
Confidence 35689999985 7877775321 12345788889999999999999999 899
Q ss_pred eeeccCCCCceEEcCCC-CeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCC
Q 003504 658 IIHRDIKASSVYLDMNL-EPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKK 736 (815)
Q Consensus 658 ivHrDlk~~NIll~~~~-~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~ 736 (815)
|+||||||+|||++.++ .+||+|||+|+....+.......||+.|+|||++.+... ++.++|||||||++|||++|+.
T Consensus 191 IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~~~~~~~~~~~t~~y~aPE~~~~~~~-~~~~~DiwSlGvil~elltG~~ 269 (440)
T PTZ00036 191 ICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQRSVSYICSRFYRAPELMLGATN-YTTHIDLWSLGCIIAEMILGYP 269 (440)
T ss_pred EecCCcCHHHEEEcCCCCceeeeccccchhccCCCCcccCCCCcCccCHHHhcCCCC-CCcHHHHHHHHHHHHHHHhCCC
Confidence 99999999999999664 799999999987765544445678999999998865433 6889999999999999999999
Q ss_pred CCCCCCCccccccHHHHHH----HHHh-c-CCCC-----ccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHH
Q 003504 737 PLGDDYPEEKEGNLVSWVR----GLVR-N-NKGS-----RAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIV 805 (815)
Q Consensus 737 p~~~~~~~~~~~~~~~~~~----~~~~-~-~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~ 805 (815)
||.+....+....+..... .... . .... .+....+....+...+.++.+++.+||..||.+||++.|++
T Consensus 270 pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l 349 (440)
T PTZ00036 270 IFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEAL 349 (440)
T ss_pred CCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHh
Confidence 9986433221111111000 0000 0 0000 01111111112333456889999999999999999999997
Q ss_pred H
Q 003504 806 G 806 (815)
Q Consensus 806 ~ 806 (815)
+
T Consensus 350 ~ 350 (440)
T PTZ00036 350 A 350 (440)
T ss_pred C
Confidence 4
No 103
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=6.3e-38 Score=296.55 Aligned_cols=265 Identities=25% Similarity=0.333 Sum_probs=211.0
Q ss_pred hcCCCCCCeecccCCeeeEEEE-cCCCcEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCC-----eeE
Q 003504 507 TSNFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGD-----QRI 580 (815)
Q Consensus 507 ~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~-----~~~ 580 (815)
..+|.+.+.+|+|||+-||.++ ..++.-+|+|++......+.+...+|++..++++|||++++++++..+. +.|
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~y 99 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAY 99 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEE
Confidence 4578899999999999999999 6778899999998766667788899999999999999999999886543 589
Q ss_pred EEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeee
Q 003504 581 AIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIH 660 (815)
Q Consensus 581 lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivH 660 (815)
++++|...|+|.+.+...+. .+..++..+.+.|+.++.+||++||+. .++++|
T Consensus 100 ll~Pyy~~Gsl~d~i~~~k~--------------------------kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH 152 (302)
T KOG2345|consen 100 LLLPYYKRGSLLDEIERLKI--------------------------KGNFVSEAQILWIFLGICRGLEALHEK-EPPYAH 152 (302)
T ss_pred EEeehhccccHHHHHHHHhh--------------------------cCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccc
Confidence 99999999999999976432 245688899999999999999999943 456999
Q ss_pred ccCCCCceEEcCCCCeeecccccceecCC---CC-------ccccccccccccCCcccCCCCC-CCCCcCcchhHHHHHH
Q 003504 661 RDIKASSVYLDMNLEPRLSDFGLAKIFGN---GL-------DEEIARGSPGYIPPEFAQPDSD-FPTPKSDVYCYGVVLL 729 (815)
Q Consensus 661 rDlk~~NIll~~~~~~kl~Dfgla~~~~~---~~-------~~~~~~gt~~y~aPE~~~~~~~-~~~~~~Dv~S~Gvvl~ 729 (815)
|||||.|||+.+++.++|.|||.+....- +. .......|..|.|||.+....+ ..++++|||||||++|
T Consensus 153 ~DiKP~NILls~~~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLY 232 (302)
T KOG2345|consen 153 RDIKPANILLSDSGLPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLY 232 (302)
T ss_pred cCCCcceeEecCCCceEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHH
Confidence 99999999999999999999999876531 11 1112236889999998775542 2589999999999999
Q ss_pred HHHhCCCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 003504 730 ELITGKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLK 809 (815)
Q Consensus 730 el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~ 809 (815)
+|+.|..||......+ +++. ..+..+.+.-......++.+.+++..|++.||.+||+..+++..++
T Consensus 233 a~mf~~sPfe~~~~~G--gSla------------LAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d 298 (302)
T KOG2345|consen 233 AMMFGESPFERIYQQG--GSLA------------LAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLD 298 (302)
T ss_pred HHHHcCCcchHHhhcC--CeEE------------EeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHH
Confidence 9999999997533311 1111 0111222222223337789999999999999999999999999988
Q ss_pred hhh
Q 003504 810 DIE 812 (815)
Q Consensus 810 ~i~ 812 (815)
.+.
T Consensus 299 ~Li 301 (302)
T KOG2345|consen 299 DLI 301 (302)
T ss_pred hhc
Confidence 764
No 104
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=3.4e-37 Score=320.34 Aligned_cols=245 Identities=22% Similarity=0.346 Sum_probs=195.6
Q ss_pred CeecccCCeeeEEEEc-CCCcEEEEEEeecCC-cccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeCCCCCh
Q 003504 514 TLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGS-TLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNL 591 (815)
Q Consensus 514 ~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL 591 (815)
+.||+|+||.||+|+. .+++.||+|.+.... ......+.+|++++++++||||++++++|......++||||+++++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 4699999999999996 478899999876432 23345789999999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCceEEc
Q 003504 592 QNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLD 671 (815)
Q Consensus 592 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NIll~ 671 (815)
.++++.. ...+++.....++.|++.||+||| +.+++||||||+||+++
T Consensus 81 ~~~~~~~-----------------------------~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dl~p~nil~~ 128 (252)
T cd05084 81 LTFLRTE-----------------------------GPRLKVKELIQMVENAAAGMEYLE---SKHCIHRDLAARNCLVT 128 (252)
T ss_pred HHHHHhC-----------------------------CCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchheEEEc
Confidence 9999642 234788999999999999999999 88999999999999999
Q ss_pred CCCCeeecccccceecCCCCcc---ccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCCcccc
Q 003504 672 MNLEPRLSDFGLAKIFGNGLDE---EIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKE 747 (815)
Q Consensus 672 ~~~~~kl~Dfgla~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~~~~ 747 (815)
.++.+||+|||++......... ....++..|+|||.+.+.. ++.++|||||||++||+++ |..||......
T Consensus 129 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~--- 203 (252)
T cd05084 129 EKNVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGR--YSSESDVWSFGILLWEAFSLGAVPYANLSNQ--- 203 (252)
T ss_pred CCCcEEECccccCcccccccccccCCCCCCceeecCchhhcCCC--CChHHHHHHHHHHHHHHHhCCCCCccccCHH---
Confidence 9999999999998865432211 1112345699999987665 6889999999999999998 88888643221
Q ss_pred ccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 003504 748 GNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLK 809 (815)
Q Consensus 748 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~ 809 (815)
.. ...... ......+..++.++.+++.+||+.+|++||++.++.++|+
T Consensus 204 -~~----~~~~~~---------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 204 -QT----REAIEQ---------GVRLPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred -HH----HHHHHc---------CCCCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 11 111111 1111223345678999999999999999999999999886
No 105
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=3.8e-37 Score=325.33 Aligned_cols=264 Identities=25% Similarity=0.388 Sum_probs=208.4
Q ss_pred hcCCCCCCeecccCCeeeEEEEcCC-----CcEEEEEEeecCCc-ccHHHHHHHHHHhcCCCCCCceeeeeEEEe-CCee
Q 003504 507 TSNFDRGTLLAEGKFGPVYRGFLPG-----GIHVAVKVLVHGST-LTDQEAARELEYLGRIKHPNLVPLTGYCIA-GDQR 579 (815)
Q Consensus 507 ~~~~~~~~~ig~G~~g~Vy~~~~~~-----~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~-~~~~ 579 (815)
.++|.+.+.||+|+||.||+|...+ +..||+|.+..... ...+.+.+|+.++++++||||+++++++.. ....
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 84 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPP 84 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCC
Confidence 4678889999999999999999755 68899998865322 334568899999999999999999999876 4678
Q ss_pred EEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCee
Q 003504 580 IAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPII 659 (815)
Q Consensus 580 ~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~iv 659 (815)
++++||+++|+|.+++...+... ......+++..+..++.|++.||+||| +.+++
T Consensus 85 ~~~~~~~~~~~L~~~l~~~~~~~----------------------~~~~~~l~~~~~~~i~~~i~~~l~~LH---~~~i~ 139 (280)
T cd05043 85 FVLYPYMNWGNLKLFLQQCRLGE----------------------ANNPQALSTQQLVHMAIQIACGMSYLH---KRGVI 139 (280)
T ss_pred EEEEEcCCCCcHHHHHHhccccc----------------------cccccCCCHHHHHHHHHHHHHHHHHHH---HCCEe
Confidence 99999999999999997532110 012346889999999999999999999 88999
Q ss_pred eccCCCCceEEcCCCCeeecccccceecCCCCc---cccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CC
Q 003504 660 HRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLD---EEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GK 735 (815)
Q Consensus 660 HrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~ 735 (815)
||||||+||++++++.+||+|||+++.+..+.. .....++..|+|||.+.... ++.++|||||||++||+++ |+
T Consensus 140 H~di~p~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~--~~~~~Di~slG~~l~el~~~g~ 217 (280)
T cd05043 140 HKDIAARNCVIDEELQVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKE--YSSASDVWSFGVLLWELMTLGQ 217 (280)
T ss_pred ecccCHhhEEEcCCCcEEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCC--CCchhhHHHhHHHHHHHhcCCC
Confidence 999999999999999999999999986643321 12233567899999887655 7899999999999999999 99
Q ss_pred CCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhhhhc
Q 003504 736 KPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDIEST 814 (815)
Q Consensus 736 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~~~ 814 (815)
.||....+. .+..++. .. .....+..++.++.+++.+||..||++||++.++++.|+++.+.
T Consensus 218 ~p~~~~~~~----~~~~~~~----~~---------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~ 279 (280)
T cd05043 218 TPYVEIDPF----EMAAYLK----DG---------YRLAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHAQ 279 (280)
T ss_pred CCcCcCCHH----HHHHHHH----cC---------CCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence 999753321 1222111 11 01111223456789999999999999999999999999998764
No 106
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=7.1e-37 Score=326.96 Aligned_cols=263 Identities=20% Similarity=0.252 Sum_probs=196.8
Q ss_pred hcCCCCCCeecccCCeeeEEEEcC-CCcEEEEEEeecCCc-ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEE
Q 003504 507 TSNFDRGTLLAEGKFGPVYRGFLP-GGIHVAVKVLVHGST-LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYD 584 (815)
Q Consensus 507 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 584 (815)
.++|++.+.||+|+||.||+|... +++.||||++..... .....+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence 467999999999999999999964 688999999865332 223467889999999999999999999999999999999
Q ss_pred eCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCC
Q 003504 585 YMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIK 664 (815)
Q Consensus 585 y~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk 664 (815)
|++ ++|.+++... ...++......++.|++.||+||| +.+|+|||||
T Consensus 84 ~~~-~~l~~~~~~~-----------------------------~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlk 130 (303)
T cd07869 84 YVH-TDLCQYMDKH-----------------------------PGGLHPENVKLFLFQLLRGLSYIH---QRYILHRDLK 130 (303)
T ss_pred CCC-cCHHHHHHhC-----------------------------CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCC
Confidence 996 5888887642 234667778899999999999999 8999999999
Q ss_pred CCceEEcCCCCeeecccccceecCCCC-ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCC
Q 003504 665 ASSVYLDMNLEPRLSDFGLAKIFGNGL-DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYP 743 (815)
Q Consensus 665 ~~NIll~~~~~~kl~Dfgla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~ 743 (815)
|+||+++.++.+||+|||+++...... ......|++.|+|||++.+... ++.++||||+||++|||++|+.||.+...
T Consensus 131 p~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~~DiwslG~il~~l~~g~~pf~~~~~ 209 (303)
T cd07869 131 PQNLLISDTGELKLADFGLARAKSVPSHTYSNEVVTLWYRPPDVLLGSTE-YSTCLDMWGVGCIFVEMIQGVAAFPGMKD 209 (303)
T ss_pred HHHEEECCCCCEEECCCCcceeccCCCccCCCCcccCCCCChHHHcCCCC-CCcHHHHHHHHHHHHHHHhCCCCCCCCcc
Confidence 999999999999999999997653222 2234568999999998865432 67889999999999999999999975321
Q ss_pred ccccccHHHHHHHHHhcCC---C------CccccccccCCCCH---------HHHHHHHHHHhhccccCCCCCCCHHHHH
Q 003504 744 EEKEGNLVSWVRGLVRNNK---G------SRAIDPKIRDTGPE---------KQMEEALKIGYLCTADLPLKRPSMQQIV 805 (815)
Q Consensus 744 ~~~~~~~~~~~~~~~~~~~---~------~~~~~~~~~~~~~~---------~~~~~~~~l~~~Cl~~dP~~RPs~~~v~ 805 (815)
. ...+.. +........ . ............+. ..+..+.+++.+|++.||++|||++|++
T Consensus 210 ~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l 286 (303)
T cd07869 210 I--QDQLER-IFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAAL 286 (303)
T ss_pred H--HHHHHH-HHHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHh
Confidence 1 111111 110000000 0 00000000000011 1235678999999999999999999997
Q ss_pred H
Q 003504 806 G 806 (815)
Q Consensus 806 ~ 806 (815)
+
T Consensus 287 ~ 287 (303)
T cd07869 287 S 287 (303)
T ss_pred c
Confidence 5
No 107
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=2e-37 Score=334.49 Aligned_cols=240 Identities=23% Similarity=0.267 Sum_probs=193.3
Q ss_pred CeecccCCeeeEEEEc-CCCcEEEEEEeecCCc---ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeCCCC
Q 003504 514 TLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGST---LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENG 589 (815)
Q Consensus 514 ~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~g 589 (815)
+.||+|+||.||+|.. .++..||+|++..... .....+.+|+++++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999984 5789999999975321 22346678999999999999999999999999999999999999
Q ss_pred ChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCC-CCeeeccCCCCce
Q 003504 590 NLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCS-PPIIHRDIKASSV 668 (815)
Q Consensus 590 sL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~-~~ivHrDlk~~NI 668 (815)
+|..++.. ...+++.....++.|++.||+||| + .+|+||||||+||
T Consensus 81 ~L~~~l~~------------------------------~~~l~~~~~~~~~~qi~~aL~~lH---~~~~ivHrDikp~NI 127 (325)
T cd05594 81 ELFFHLSR------------------------------ERVFSEDRARFYGAEIVSALDYLH---SEKNVVYRDLKLENL 127 (325)
T ss_pred cHHHHHHh------------------------------cCCCCHHHHHHHHHHHHHHHHHHH---hcCCEEecCCCCCeE
Confidence 99988864 235788889999999999999999 5 7999999999999
Q ss_pred EEcCCCCeeecccccceecCC-CCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCcccc
Q 003504 669 YLDMNLEPRLSDFGLAKIFGN-GLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKE 747 (815)
Q Consensus 669 ll~~~~~~kl~Dfgla~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~ 747 (815)
|++.++.+||+|||+++.... ........||+.|+|||++.+.. ++.++|||||||++|||++|+.||.....+
T Consensus 128 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DiwslG~il~el~tG~~Pf~~~~~~--- 202 (325)
T cd05594 128 MLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDND--YGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--- 202 (325)
T ss_pred EECCCCCEEEecCCCCeecCCCCcccccccCCcccCCHHHHccCC--CCCccccccccceeeeeccCCCCCCCCCHH---
Confidence 999999999999999876432 22233456999999999987665 689999999999999999999999753221
Q ss_pred ccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCC-----CHHHHHH
Q 003504 748 GNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRP-----SMQQIVG 806 (815)
Q Consensus 748 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----s~~~v~~ 806 (815)
.......... . ..+...+.++.+++.+|++.||++|+ +++++++
T Consensus 203 ----~~~~~i~~~~-------~----~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~ 251 (325)
T cd05594 203 ----KLFELILMEE-------I----RFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQ 251 (325)
T ss_pred ----HHHHHHhcCC-------C----CCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhc
Confidence 1111111110 0 11233456788999999999999996 8988875
No 108
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=4.3e-37 Score=333.12 Aligned_cols=250 Identities=25% Similarity=0.272 Sum_probs=196.7
Q ss_pred CCCCCCeecccCCeeeEEEEc----CCCcEEEEEEeecCC----cccHHHHHHHHHHhcCC-CCCCceeeeeEEEeCCee
Q 003504 509 NFDRGTLLAEGKFGPVYRGFL----PGGIHVAVKVLVHGS----TLTDQEAARELEYLGRI-KHPNLVPLTGYCIAGDQR 579 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~----~~~~~vavK~l~~~~----~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~ 579 (815)
+|++.+.||+|+||.||+++. .++..||+|++.+.. ....+.+.+|+.++.++ +||||+++++++...+..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 477889999999999999874 367899999986532 12234678899999999 599999999999999999
Q ss_pred EEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCee
Q 003504 580 IAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPII 659 (815)
Q Consensus 580 ~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~iv 659 (815)
++||||+++|+|.+++.. ...+++.....++.|++.||+||| +.+|+
T Consensus 81 ~lv~e~~~~g~L~~~l~~------------------------------~~~~~~~~~~~~~~qi~~~l~~lH---~~~iv 127 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQ------------------------------RDNFSEDEVRFYSGEIILALEHLH---KLGIV 127 (332)
T ss_pred EEEEeCCCCCcHHHHHHH------------------------------cCCCCHHHHHHHHHHHHHHHHHHH---HCCcE
Confidence 999999999999999864 224677888899999999999999 88999
Q ss_pred eccCCCCceEEcCCCCeeecccccceecCCCC--ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCC
Q 003504 660 HRDIKASSVYLDMNLEPRLSDFGLAKIFGNGL--DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKP 737 (815)
Q Consensus 660 HrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p 737 (815)
||||||+|||++.++.+||+|||+++...... ......||..|+|||++.+... ++.++|||||||++|||++|+.|
T Consensus 128 HrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~~DiwslG~il~elltg~~p 206 (332)
T cd05614 128 YRDIKLENILLDSEGHVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGG-HGKAVDWWSLGILIFELLTGASP 206 (332)
T ss_pred ecCCCHHHeEECCCCCEEEeeCcCCccccccCCCccccccCCccccCHHHhcCCCC-CCCccccccchhhhhhhhcCCCC
Confidence 99999999999999999999999998654322 2234569999999999875432 57899999999999999999999
Q ss_pred CCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCC-----CHHHHHH
Q 003504 738 LGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRP-----SMQQIVG 806 (815)
Q Consensus 738 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----s~~~v~~ 806 (815)
|......... .......... ++.+ +...+.++.+++.+||+.||++|| +++++++
T Consensus 207 f~~~~~~~~~---~~~~~~~~~~-------~~~~----~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 266 (332)
T cd05614 207 FTLEGERNTQ---SEVSRRILKC-------DPPF----PSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE 266 (332)
T ss_pred CCCCCCCCCH---HHHHHHHhcC-------CCCC----CCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence 9753221111 1111111111 1111 233456788999999999999999 6777764
No 109
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=2.8e-37 Score=340.49 Aligned_cols=249 Identities=23% Similarity=0.285 Sum_probs=193.2
Q ss_pred CCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCc---ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEE
Q 003504 509 NFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGST---LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYD 584 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 584 (815)
.|+..+.||+|+||.||+|+. .+++.||||++..... .....+.+|++++++++||||+++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 577889999999999999984 5688999999975322 223468899999999999999999999999999999999
Q ss_pred eCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCC
Q 003504 585 YMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIK 664 (815)
Q Consensus 585 y~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk 664 (815)
|+++|+|.+++... ..+++.....++.|++.||+||| +.+|||||||
T Consensus 82 ~~~gg~L~~~l~~~------------------------------~~~~e~~~~~~~~qi~~aL~~LH---~~givHrDlK 128 (381)
T cd05626 82 YIPGGDMMSLLIRM------------------------------EVFPEVLARFYIAELTLAIESVH---KMGFIHRDIK 128 (381)
T ss_pred cCCCCcHHHHHHhc------------------------------CCCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCc
Confidence 99999999998642 24667777889999999999999 8999999999
Q ss_pred CCceEEcCCCCeeecccccceecCCCC------------------------------------------------ccccc
Q 003504 665 ASSVYLDMNLEPRLSDFGLAKIFGNGL------------------------------------------------DEEIA 696 (815)
Q Consensus 665 ~~NIll~~~~~~kl~Dfgla~~~~~~~------------------------------------------------~~~~~ 696 (815)
|+|||++.++.+||+|||+++...... .....
T Consensus 129 p~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (381)
T cd05626 129 PDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSL 208 (381)
T ss_pred HHHEEECCCCCEEEeeCcCCcccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccc
Confidence 999999999999999999976431000 01124
Q ss_pred cccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCC
Q 003504 697 RGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGP 776 (815)
Q Consensus 697 ~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 (815)
.||+.|+|||++.+.. ++.++|||||||++|||++|+.||....+.+....+ ..... .+.....
T Consensus 209 ~gt~~Y~aPE~~~~~~--~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i-------~~~~~-------~~~~~~~ 272 (381)
T cd05626 209 VGTPNYIAPEVLLRKG--YTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKV-------INWEN-------TLHIPPQ 272 (381)
T ss_pred cCCccccCHHHHcCCC--CCCccceeehhhHHHHHHhCCCCCcCCCHHHHHHHH-------Hcccc-------ccCCCCC
Confidence 6999999999987665 688999999999999999999999764332211111 11000 0000111
Q ss_pred HHHHHHHHHHHhh--ccccCCCCCCCHHHHHH
Q 003504 777 EKQMEEALKIGYL--CTADLPLKRPSMQQIVG 806 (815)
Q Consensus 777 ~~~~~~~~~l~~~--Cl~~dP~~RPs~~~v~~ 806 (815)
...+.++.+++.+ |+..+|..||++++++.
T Consensus 273 ~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~ 304 (381)
T cd05626 273 VKLSPEAVDLITKLCCSAEERLGRNGADDIKA 304 (381)
T ss_pred CCCCHHHHHHHHHHccCcccccCCCCHHHHhc
Confidence 1234566677766 66777778999999975
No 110
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=6.8e-37 Score=320.99 Aligned_cols=260 Identities=23% Similarity=0.389 Sum_probs=208.7
Q ss_pred cCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCc---ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEE
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGST---LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIY 583 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 583 (815)
++|++.+.||+|+||.||+|+. .++..+|||.+..... .....+.+|+++++.++||||+++++++...+..++||
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 3677889999999999999994 5789999998865322 22357889999999999999999999999999999999
Q ss_pred EeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccC
Q 003504 584 DYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDI 663 (815)
Q Consensus 584 ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDl 663 (815)
||+++++|.+++.... .....+++.....++.|++.||+||| +.+++|+||
T Consensus 82 e~~~~~~L~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl 132 (267)
T cd08229 82 ELADAGDLSRMIKHFK--------------------------KQKRLIPEKTVWKYFVQLCSALEHMH---SRRVMHRDI 132 (267)
T ss_pred EecCCCCHHHHHHHhh--------------------------ccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCC
Confidence 9999999999986421 12346789999999999999999999 899999999
Q ss_pred CCCceEEcCCCCeeecccccceecCCCCc-cccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCC
Q 003504 664 KASSVYLDMNLEPRLSDFGLAKIFGNGLD-EEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDY 742 (815)
Q Consensus 664 k~~NIll~~~~~~kl~Dfgla~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~ 742 (815)
||+||+++.++.++|+|||++........ .....|+..|+|||.+.... ++.++||||||+++|||++|..||....
T Consensus 133 ~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~--~~~~~Dv~slG~il~~l~~g~~p~~~~~ 210 (267)
T cd08229 133 KPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENG--YNFKSDIWSLGCLLYEMAALQSPFYGDK 210 (267)
T ss_pred CHHHEEEcCCCCEEECcchhhhccccCCcccccccCCcCccCHHHhcCCC--ccchhhHHHHHHHHHHHHhCCCCccccc
Confidence 99999999999999999999886643321 22345889999999987665 6889999999999999999999986432
Q ss_pred CccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhhh
Q 003504 743 PEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDIE 812 (815)
Q Consensus 743 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~ 812 (815)
. ....+.+..... ......+...+.++.+++.+||+.+|++||+|.+|++.++++.
T Consensus 211 ~-----~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 211 M-----NLYSLCKKIEQC---------DYPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred c-----hHHHHhhhhhcC---------CCCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 1 111221111110 1111113346678999999999999999999999999998874
No 111
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=8.3e-37 Score=320.31 Aligned_cols=255 Identities=23% Similarity=0.297 Sum_probs=202.4
Q ss_pred cCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeC
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYM 586 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 586 (815)
.+|++.+.||+|+||.||+|+. .+++.||+|++..........+.+|+.++++++||||+++++++...+..++|+||+
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~ 88 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYC 88 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCC
Confidence 4788999999999999999995 678899999987644445567889999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCC
Q 003504 587 ENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKAS 666 (815)
Q Consensus 587 ~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~ 666 (815)
++|+|.++++. ...+++..+..++.|++.||+||| +.+|+||||||+
T Consensus 89 ~~~~L~~~~~~------------------------------~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~ 135 (267)
T cd06646 89 GGGSLQDIYHV------------------------------TGPLSELQIAYVCRETLQGLAYLH---SKGKMHRDIKGA 135 (267)
T ss_pred CCCcHHHHHHh------------------------------cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHH
Confidence 99999999864 224678888999999999999999 789999999999
Q ss_pred ceEEcCCCCeeecccccceecCCCC-ccccccccccccCCcccCCC-CCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCc
Q 003504 667 SVYLDMNLEPRLSDFGLAKIFGNGL-DEEIARGSPGYIPPEFAQPD-SDFPTPKSDVYCYGVVLLELITGKKPLGDDYPE 744 (815)
Q Consensus 667 NIll~~~~~~kl~Dfgla~~~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~ 744 (815)
||+++.++.+||+|||++....... ......|+..|+|||.+... ...++.++|||||||++|||++|+.||....+.
T Consensus 136 nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~ 215 (267)
T cd06646 136 NILLTDNGDVKLADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPM 215 (267)
T ss_pred HEEECCCCCEEECcCccceeecccccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchh
Confidence 9999999999999999998764332 22344688999999987532 222578999999999999999999998643221
Q ss_pred cccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 003504 745 EKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLL 808 (815)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L 808 (815)
+....+ .. .....+... .....+.++.+++.+||..+|++||+++++++.|
T Consensus 216 ~~~~~~--------~~---~~~~~~~~~--~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 216 RALFLM--------SK---SNFQPPKLK--DKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred hhheee--------ec---CCCCCCCCc--cccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 111000 00 011111111 1223457889999999999999999999998753
No 112
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=6.6e-37 Score=322.03 Aligned_cols=256 Identities=27% Similarity=0.392 Sum_probs=197.6
Q ss_pred CCCCCeecccCCeeeEEEEcCC-C--cEEEEEEeecCC--cccHHHHHHHHHHhcCCCCCCceeeeeEEEeC------Ce
Q 003504 510 FDRGTLLAEGKFGPVYRGFLPG-G--IHVAVKVLVHGS--TLTDQEAARELEYLGRIKHPNLVPLTGYCIAG------DQ 578 (815)
Q Consensus 510 ~~~~~~ig~G~~g~Vy~~~~~~-~--~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~------~~ 578 (815)
|.+++.||+|+||.||+|+..+ + ..||||.++... ....+.+.+|++++++++||||++++++|... ..
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 3567899999999999999654 3 268999886532 23346788999999999999999999988642 24
Q ss_pred eEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCe
Q 003504 579 RIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPI 658 (815)
Q Consensus 579 ~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~i 658 (815)
.++|+||+++|+|.+++..... +.....+++.....++.|++.||+||| +.+|
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i 133 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRL------------------------GDCPQYLPTQMLVKFMTDIASGMEYLS---SKSF 133 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcc------------------------cCCcccCCHHHHHHHHHHHHHHHHHHH---HCCe
Confidence 6899999999999998853210 012345789999999999999999999 7899
Q ss_pred eeccCCCCceEEcCCCCeeecccccceecCCCCc---cccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-C
Q 003504 659 IHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLD---EEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-G 734 (815)
Q Consensus 659 vHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g 734 (815)
+||||||+||++++++.+||+|||+++.+..... .....+++.|+|||...... ++.++||||||+++||+++ |
T Consensus 134 ~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~--~~~~~Di~slG~il~el~~~g 211 (272)
T cd05075 134 IHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRV--YTTKSDVWSFGVTMWEIATRG 211 (272)
T ss_pred eccccchhheEEcCCCCEEECCCCcccccCcccceecCCcccCCcccCCHHHccCCC--cChHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999999999987654321 12233567899999987665 7889999999999999999 8
Q ss_pred CCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhh
Q 003504 735 KKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDI 811 (815)
Q Consensus 735 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 811 (815)
+.||...... .+.. ........ ..+...+..+.+++.+||+.+|++||++.++++.|+++
T Consensus 212 ~~p~~~~~~~----~~~~----~~~~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 212 QTPYPGVENS----EIYD----YLRQGNRL---------KQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred CCCCCCCCHH----HHHH----HHHcCCCC---------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 8898652221 1111 11111100 11223456789999999999999999999999999875
No 113
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=4.3e-37 Score=331.70 Aligned_cols=243 Identities=24% Similarity=0.294 Sum_probs=191.9
Q ss_pred CCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCC---cccHHHHHHHHHH---hcCCCCCCceeeeeEEEeCCeeEEE
Q 003504 510 FDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGS---TLTDQEAARELEY---LGRIKHPNLVPLTGYCIAGDQRIAI 582 (815)
Q Consensus 510 ~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~E~~~---l~~l~H~niv~l~g~~~~~~~~~lv 582 (815)
|.+.+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|+++ +++++||||+++++++...+..++|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 55678999999999999985 568999999997532 1223456666655 4677899999999999999999999
Q ss_pred EEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecc
Q 003504 583 YDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRD 662 (815)
Q Consensus 583 ~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrD 662 (815)
|||+++|+|..+++. ..+++.....++.|++.||+||| +.+|+|||
T Consensus 81 ~E~~~~~~L~~~~~~-------------------------------~~l~~~~~~~~~~qi~~al~~lH---~~~ivHrd 126 (324)
T cd05589 81 MEYAAGGDLMMHIHT-------------------------------DVFSEPRAVFYAACVVLGLQYLH---ENKIVYRD 126 (324)
T ss_pred EcCCCCCcHHHHhhc-------------------------------CCCCHHHHHHHHHHHHHHHHHHH---hCCeEecC
Confidence 999999999888753 24788899999999999999999 89999999
Q ss_pred CCCCceEEcCCCCeeecccccceecCC-CCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCC
Q 003504 663 IKASSVYLDMNLEPRLSDFGLAKIFGN-GLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDD 741 (815)
Q Consensus 663 lk~~NIll~~~~~~kl~Dfgla~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~ 741 (815)
|||+||+++.++.+||+|||+++.... ........|++.|+|||.+.+.. ++.++|||||||++|||++|+.||...
T Consensus 127 lkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~--~~~~~DiwslG~il~el~~G~~pf~~~ 204 (324)
T cd05589 127 LKLDNLLLDTEGFVKIADFGLCKEGMGFGDRTSTFCGTPEFLAPEVLTETS--YTRAVDWWGLGVLIYEMLVGESPFPGD 204 (324)
T ss_pred CCHHHeEECCCCcEEeCcccCCccCCCCCCcccccccCccccCHhHhcCCC--CCcccchhhHHHHHHHHHhCCCCCCCC
Confidence 999999999999999999999875432 22234456999999999987665 688999999999999999999999753
Q ss_pred CCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCC-----CHHHHHH
Q 003504 742 YPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRP-----SMQQIVG 806 (815)
Q Consensus 742 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----s~~~v~~ 806 (815)
... ........... ..+...+..+.+++.+||+.||++|| ++.++++
T Consensus 205 ~~~-------~~~~~i~~~~~-----------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 205 DEE-------EVFDSIVNDEV-----------RYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred CHH-------HHHHHHHhCCC-----------CCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence 221 11122211110 11333456788999999999999999 4555544
No 114
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=3.8e-37 Score=320.93 Aligned_cols=244 Identities=23% Similarity=0.382 Sum_probs=193.9
Q ss_pred eecccCCeeeEEEEc---CCCcEEEEEEeecCCc--ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeCCCC
Q 003504 515 LLAEGKFGPVYRGFL---PGGIHVAVKVLVHGST--LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENG 589 (815)
Q Consensus 515 ~ig~G~~g~Vy~~~~---~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~g 589 (815)
.||+|+||.||+|.+ .++..||+|++..... ...+++.+|+.++++++||||++++|++. .+..++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 589999999999974 4578899999864332 23467889999999999999999999885 45678999999999
Q ss_pred ChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCceE
Q 003504 590 NLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVY 669 (815)
Q Consensus 590 sL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NIl 669 (815)
+|.+++.. ...+++..+.+++.|++.||+||| +++++||||||+||+
T Consensus 81 ~L~~~l~~------------------------------~~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~nil 127 (257)
T cd05116 81 PLNKFLQK------------------------------NKHVTEKNITELVHQVSMGMKYLE---ETNFVHRDLAARNVL 127 (257)
T ss_pred cHHHHHHh------------------------------cCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccchhhEE
Confidence 99999964 224678889999999999999999 899999999999999
Q ss_pred EcCCCCeeecccccceecCCCCc----cccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCCc
Q 003504 670 LDMNLEPRLSDFGLAKIFGNGLD----EEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GKKPLGDDYPE 744 (815)
Q Consensus 670 l~~~~~~kl~Dfgla~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~ 744 (815)
++.++.+||+|||+++....... .....++..|+|||.+.... ++.++|||||||++||+++ |+.||......
T Consensus 128 l~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~Di~slG~~l~el~t~g~~p~~~~~~~ 205 (257)
T cd05116 128 LVTQHYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYK--FSSKSDVWSFGVLMWEAFSYGQKPYKGMKGN 205 (257)
T ss_pred EcCCCeEEECCCccccccCCCCCeeeecCCCCCCccccCHhHhccCC--cCchhHHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence 99999999999999987654322 12223457899999886554 6889999999999999998 99999753221
Q ss_pred cccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhh
Q 003504 745 EKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDI 811 (815)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 811 (815)
.+. .. .+... ....+..++.++.+++.+||+.||++||++.+|.+.|+++
T Consensus 206 ----~~~---~~-i~~~~---------~~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 206 ----EVT---QM-IESGE---------RMECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred ----HHH---HH-HHCCC---------CCCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 111 11 11111 1112334567789999999999999999999999999864
No 115
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=4.5e-37 Score=320.18 Aligned_cols=251 Identities=29% Similarity=0.445 Sum_probs=205.0
Q ss_pred hcCCCCCCeecccCCeeeEEEEcCCCcEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeC
Q 003504 507 TSNFDRGTLLAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYM 586 (815)
Q Consensus 507 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 586 (815)
.++|++.+.||+|+||.||+|... |+.||||.+..... ..+.+.+|+.++++++|+||+++++++.+....++||||+
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 82 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYM 82 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEec
Confidence 346888899999999999999876 78899999976433 4667899999999999999999999999989999999999
Q ss_pred CCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCC
Q 003504 587 ENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKAS 666 (815)
Q Consensus 587 ~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~ 666 (815)
++|+|.+++... ....++|..+..++.|++.||+||| +.+++||||||+
T Consensus 83 ~~~~L~~~~~~~----------------------------~~~~~~~~~~~~~~~qi~~~l~~lh---~~~i~H~di~p~ 131 (256)
T cd05039 83 AKGSLVDYLRSR----------------------------GRAVITLAQQLGFALDVCEGMEYLE---EKNFVHRDLAAR 131 (256)
T ss_pred CCCcHHHHHHhc----------------------------CCCCCCHHHHHHHHHHHHHHHHHHH---hCCccchhcccc
Confidence 999999999752 1235789999999999999999999 899999999999
Q ss_pred ceEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCCcc
Q 003504 667 SVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GKKPLGDDYPEE 745 (815)
Q Consensus 667 NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~~ 745 (815)
||+++.++.+||+|||.++....... ...++..|+|||.+.... ++.++||||||+++||+++ |+.||......
T Consensus 132 Nili~~~~~~~l~d~g~~~~~~~~~~--~~~~~~~~~ape~~~~~~--~~~~~Di~slG~il~~l~~~g~~p~~~~~~~- 206 (256)
T cd05039 132 NVLVSEDLVAKVSDFGLAKEASQGQD--SGKLPVKWTAPEALREKK--FSTKSDVWSFGILLWEIYSFGRVPYPRIPLK- 206 (256)
T ss_pred eEEEeCCCCEEEcccccccccccccc--cCCCcccccCchhhcCCc--CCcHHHHHHHHHHHHHHHhcCCCCCCCCCHH-
Confidence 99999999999999999987643222 233567899999887655 6889999999999999998 99998643211
Q ss_pred ccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhh
Q 003504 746 KEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDI 811 (815)
Q Consensus 746 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 811 (815)
.+.. ..... .....+...+.++.+++.+||..+|++||++++++++|+.+
T Consensus 207 ---~~~~----~~~~~---------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 207 ---DVVP----HVEKG---------YRMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred ---HHHH----HHhcC---------CCCCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 1111 11111 01111333467889999999999999999999999999764
No 116
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=6.7e-37 Score=321.21 Aligned_cols=254 Identities=26% Similarity=0.432 Sum_probs=202.6
Q ss_pred hcCCCCCCeecccCCeeeEEEEcC-CC---cEEEEEEeecCC-cccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEE
Q 003504 507 TSNFDRGTLLAEGKFGPVYRGFLP-GG---IHVAVKVLVHGS-TLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIA 581 (815)
Q Consensus 507 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~---~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 581 (815)
.++|+..+.||+|+||.||+|... ++ ..+|||.+.... ....+.+.+|++++.+++||||+++.+++...+..++
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMI 83 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEE
Confidence 346778899999999999999864 23 379999886542 2334678899999999999999999999999999999
Q ss_pred EEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeec
Q 003504 582 IYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHR 661 (815)
Q Consensus 582 v~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHr 661 (815)
||||+++|+|.++++.. ...+++..+..++.|++.|++||| +.+++||
T Consensus 84 v~e~~~~~~L~~~~~~~-----------------------------~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~ 131 (268)
T cd05063 84 ITEYMENGALDKYLRDH-----------------------------DGEFSSYQLVGMLRGIAAGMKYLS---DMNYVHR 131 (268)
T ss_pred EEEcCCCCCHHHHHHhc-----------------------------CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecc
Confidence 99999999999999642 235788999999999999999999 8899999
Q ss_pred cCCCCceEEcCCCCeeecccccceecCCCCcc----ccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CCC
Q 003504 662 DIKASSVYLDMNLEPRLSDFGLAKIFGNGLDE----EIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GKK 736 (815)
Q Consensus 662 Dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~ 736 (815)
||||+||+++.++.+||+|||++......... .....+..|+|||++.... ++.++|||||||++||+++ |+.
T Consensus 132 dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~--~~~~~Dv~slG~il~ell~~g~~ 209 (268)
T cd05063 132 DLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRK--FTSASDVWSFGIVMWEVMSFGER 209 (268)
T ss_pred ccchhhEEEcCCCcEEECCCccceecccccccceeccCCCcCceecCHHHhhcCC--cChHhHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999876432211 1112345799999887655 6889999999999999998 999
Q ss_pred CCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhh
Q 003504 737 PLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDI 811 (815)
Q Consensus 737 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 811 (815)
||..... ..+..... .. .....+..++.++.+++.+||+.+|++||++.+|++.|+++
T Consensus 210 p~~~~~~-------~~~~~~i~-~~---------~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 210 PYWDMSN-------HEVMKAIN-DG---------FRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred CCCcCCH-------HHHHHHHh-cC---------CCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 9964322 11222211 11 11111334567889999999999999999999999999876
No 117
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=8.8e-37 Score=329.56 Aligned_cols=243 Identities=20% Similarity=0.245 Sum_probs=191.0
Q ss_pred CeecccCCeeeEEEEc-CCCcEEEEEEeecCCc---ccHHHHHHHHHHhcCC-CCCCceeeeeEEEeCCeeEEEEEeCCC
Q 003504 514 TLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGST---LTDQEAARELEYLGRI-KHPNLVPLTGYCIAGDQRIAIYDYMEN 588 (815)
Q Consensus 514 ~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ey~~~ 588 (815)
+.||+|+||.||+|.. .+++.||+|++..... .....+.+|+.++.++ +||||+++++++......++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 4799999999999995 4678999999975322 2234577888888776 799999999999999999999999999
Q ss_pred CChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCce
Q 003504 589 GNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSV 668 (815)
Q Consensus 589 gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NI 668 (815)
|+|..++.. ...+++.....++.|++.||+||| +.+|+||||||+||
T Consensus 81 ~~L~~~~~~------------------------------~~~l~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dikp~Ni 127 (329)
T cd05618 81 GDLMFHMQR------------------------------QRKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNV 127 (329)
T ss_pred CCHHHHHHH------------------------------cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHE
Confidence 999988854 235778888999999999999999 88999999999999
Q ss_pred EEcCCCCeeecccccceecCC-CCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCcc-c
Q 003504 669 YLDMNLEPRLSDFGLAKIFGN-GLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEE-K 746 (815)
Q Consensus 669 ll~~~~~~kl~Dfgla~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~-~ 746 (815)
+++.++.+||+|||+++.... ........||..|+|||++.+.. ++.++|||||||++|||++|+.||....... .
T Consensus 128 li~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~ 205 (329)
T cd05618 128 LLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGED--YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNP 205 (329)
T ss_pred EECCCCCEEEeeCCccccccCCCCccccccCCccccCHHHHcCCC--CCCccceecccHHHHHHhhCCCCCccCCCcCCc
Confidence 999999999999999975422 22334456999999999998765 6889999999999999999999996422111 1
Q ss_pred cccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCH
Q 003504 747 EGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSM 801 (815)
Q Consensus 747 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~ 801 (815)
......++......... ..|...+.++.+++.+||+.||++||++
T Consensus 206 ~~~~~~~~~~~i~~~~~----------~~p~~~~~~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 206 DQNTEDYLFQVILEKQI----------RIPRSLSVKAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred ccccHHHHHHHHhcCCC----------CCCCCCCHHHHHHHHHHhcCCHHHcCCC
Confidence 12222333322222111 1133445678899999999999999983
No 118
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=8.6e-37 Score=329.79 Aligned_cols=248 Identities=20% Similarity=0.237 Sum_probs=195.3
Q ss_pred CeecccCCeeeEEEEc-CCCcEEEEEEeecCCc---ccHHHHHHHHHHhcCC-CCCCceeeeeEEEeCCeeEEEEEeCCC
Q 003504 514 TLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGST---LTDQEAARELEYLGRI-KHPNLVPLTGYCIAGDQRIAIYDYMEN 588 (815)
Q Consensus 514 ~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ey~~~ 588 (815)
+.||+|+||.||+|+. .++..||||+++.... .....+.+|..++.++ +||||+++++++.+....++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 4799999999999995 4688999999975322 2234577899999988 699999999999999999999999999
Q ss_pred CChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCce
Q 003504 589 GNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSV 668 (815)
Q Consensus 589 gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NI 668 (815)
|+|.+++.. ...+++..+..++.|++.||+||| +.+|+||||||+||
T Consensus 81 g~L~~~~~~------------------------------~~~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Ni 127 (329)
T cd05588 81 GDLMFHMQR------------------------------QRKLPEEHARFYSAEISLALNFLH---ERGIIYRDLKLDNV 127 (329)
T ss_pred CCHHHHHHH------------------------------cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHe
Confidence 999988854 235788899999999999999999 89999999999999
Q ss_pred EEcCCCCeeecccccceecC-CCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCcc-c
Q 003504 669 YLDMNLEPRLSDFGLAKIFG-NGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEE-K 746 (815)
Q Consensus 669 ll~~~~~~kl~Dfgla~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~-~ 746 (815)
+++.++.+||+|||+++... .........||+.|+|||++.+.. ++.++|||||||++|||++|+.||......+ .
T Consensus 128 li~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~ 205 (329)
T cd05588 128 LLDAEGHIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAPEILRGED--YGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNP 205 (329)
T ss_pred EECCCCCEEECcCccccccccCCCccccccCCccccCHHHHcCCC--CCCccceechHHHHHHHHHCCCCcccccccccc
Confidence 99999999999999987532 222334457999999999998765 6889999999999999999999997422211 1
Q ss_pred cccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCC------HHHHHH
Q 003504 747 EGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPS------MQQIVG 806 (815)
Q Consensus 747 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs------~~~v~~ 806 (815)
......+.......... ..|...+.++.+++.+|++.||.+||+ ++++++
T Consensus 206 ~~~~~~~~~~~~~~~~~----------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~ 261 (329)
T cd05588 206 DQNTEDYLFQVILEKQI----------RIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKS 261 (329)
T ss_pred cccchHHHHHHHHcCCC----------CCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhc
Confidence 11222333332222111 112334567889999999999999997 566653
No 119
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=9.1e-37 Score=317.81 Aligned_cols=249 Identities=24% Similarity=0.354 Sum_probs=203.0
Q ss_pred CCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecC--CcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEe
Q 003504 509 NFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHG--STLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDY 585 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 585 (815)
+|+..+.||+|++|.||+|+. .++..||+|.+... .......+.+|++++++++||||+++++++.+....++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 467788999999999999995 46889999998643 233456788999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCC
Q 003504 586 MENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKA 665 (815)
Q Consensus 586 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~ 665 (815)
+++++|.++++.. ....+++.....++.|++.||.||| +.+++||||||
T Consensus 81 ~~~~~L~~~l~~~----------------------------~~~~~~~~~~~~i~~~l~~al~~lH---~~~i~h~dl~~ 129 (256)
T cd08529 81 AENGDLHKLLKMQ----------------------------RGRPLPEDQVWRFFIQILLGLAHLH---SKKILHRDIKS 129 (256)
T ss_pred CCCCcHHHHHHHh----------------------------cCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCc
Confidence 9999999999752 1345788889999999999999999 78999999999
Q ss_pred CceEEcCCCCeeecccccceecCCCC-ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCc
Q 003504 666 SSVYLDMNLEPRLSDFGLAKIFGNGL-DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPE 744 (815)
Q Consensus 666 ~NIll~~~~~~kl~Dfgla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~ 744 (815)
+||+++.++.+||+|||+++...... ......|++.|+|||+..... ++.++|||||||++|||++|+.||......
T Consensus 130 ~nili~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~Di~slG~il~~l~~g~~p~~~~~~~ 207 (256)
T cd08529 130 LNLFLDAYDNVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCEDKP--YNEKSDVWALGVVLYECCTGKHPFDANNQG 207 (256)
T ss_pred ceEEEeCCCCEEEcccccceeccCccchhhccccCccccCHHHhcCCC--CCCccchHHHHHHHHHHHhCCCCCCCCCHH
Confidence 99999999999999999998765433 223346889999999987665 688999999999999999999999753311
Q ss_pred cccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003504 745 EKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGL 807 (815)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~ 807 (815)
.. ....... . ....+...+.++.+++.+||+.+|++||+|.++++.
T Consensus 208 ----~~---~~~~~~~-~---------~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 208 ----AL---ILKIIRG-V---------FPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred ----HH---HHHHHcC-C---------CCCCccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 11 1111111 0 111123456789999999999999999999999863
No 120
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=1.1e-37 Score=340.72 Aligned_cols=250 Identities=24% Similarity=0.292 Sum_probs=201.0
Q ss_pred cCCCCCCeecccCCeeeEEEEcC-CCcEEEEEEeecCC---cccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEE
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFLP-GGIHVAVKVLVHGS---TLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIY 583 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 583 (815)
++|.+.+.||+|+||.||+|... +++.||||++.... ......+.+|++++..++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 36888999999999999999954 78999999997532 133456889999999999999999999999999999999
Q ss_pred EeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccC
Q 003504 584 DYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDI 663 (815)
Q Consensus 584 ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDl 663 (815)
||+++|+|.+++... ..+++.....++.|++.||+||| +.+|+||||
T Consensus 81 e~~~~~~L~~~l~~~------------------------------~~l~~~~~~~i~~qi~~aL~~LH---~~giiH~Dl 127 (350)
T cd05573 81 EYMPGGDLMNLLIRK------------------------------DVFPEETARFYIAELVLALDSVH---KLGFIHRDI 127 (350)
T ss_pred cCCCCCCHHHHHHHc------------------------------CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCC
Confidence 999999999999752 34677888899999999999999 899999999
Q ss_pred CCCceEEcCCCCeeecccccceecCCCC------------------------------ccccccccccccCCcccCCCCC
Q 003504 664 KASSVYLDMNLEPRLSDFGLAKIFGNGL------------------------------DEEIARGSPGYIPPEFAQPDSD 713 (815)
Q Consensus 664 k~~NIll~~~~~~kl~Dfgla~~~~~~~------------------------------~~~~~~gt~~y~aPE~~~~~~~ 713 (815)
||+||+++.++.+||+|||+++...... ......||+.|+|||++.+..
T Consensus 128 kp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~- 206 (350)
T cd05573 128 KPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTP- 206 (350)
T ss_pred CHHHeEECCCCCEEeecCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCC-
Confidence 9999999999999999999998665332 223346899999999998775
Q ss_pred CCCCcCcchhHHHHHHHHHhCCCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhcccc
Q 003504 714 FPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTAD 793 (815)
Q Consensus 714 ~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~ 793 (815)
++.++|||||||++|||++|+.||......+. ........ . .+........+.++.+++.+|+.
T Consensus 207 -~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~-------~~~i~~~~--~-----~~~~p~~~~~~~~~~~li~~ll~- 270 (350)
T cd05573 207 -YGLECDWWSLGVILYEMLYGFPPFYSDTLQET-------YNKIINWK--E-----SLRFPPDPPVSPEAIDLICRLLC- 270 (350)
T ss_pred -CCCceeeEecchhhhhhccCCCCCCCCCHHHH-------HHHHhccC--C-----cccCCCCCCCCHHHHHHHHHHcc-
Confidence 78999999999999999999999976432211 11111100 0 00000011145678899999997
Q ss_pred CCCCCCC-HHHHHHH
Q 003504 794 LPLKRPS-MQQIVGL 807 (815)
Q Consensus 794 dP~~RPs-~~~v~~~ 807 (815)
||.+||+ ++++++.
T Consensus 271 dp~~R~~s~~~ll~h 285 (350)
T cd05573 271 DPEDRLGSFEEIKSH 285 (350)
T ss_pred ChhhcCCCHHHHhcC
Confidence 9999999 9999863
No 121
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=5.7e-37 Score=326.24 Aligned_cols=272 Identities=27% Similarity=0.355 Sum_probs=207.8
Q ss_pred HHhcCCCCCCeecccCCeeeEEEEcC------CCcEEEEEEeecCCc-ccHHHHHHHHHHhcCC-CCCCceeeeeEEEeC
Q 003504 505 SATSNFDRGTLLAEGKFGPVYRGFLP------GGIHVAVKVLVHGST-LTDQEAARELEYLGRI-KHPNLVPLTGYCIAG 576 (815)
Q Consensus 505 ~~~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~ 576 (815)
...++|+..+.||+|+||.||+|... +...||+|.+..... .....+.+|++++.++ +||||+++++++...
T Consensus 9 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 88 (293)
T cd05053 9 LPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQE 88 (293)
T ss_pred cCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCC
Confidence 34457888899999999999999853 236799999875322 2335688999999999 799999999999999
Q ss_pred CeeEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCC
Q 003504 577 DQRIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSP 656 (815)
Q Consensus 577 ~~~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~ 656 (815)
...++||||+++|+|.++++......... ...........+++..+++++.|++.||+||| +.
T Consensus 89 ~~~~li~e~~~~~~L~~~l~~~~~~~~~~--------------~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~ 151 (293)
T cd05053 89 GPLYVVVEYAAHGNLRDFLRARRPPGEYA--------------SPDDPRPPEETLTQKDLVSFAYQVARGMEFLA---SK 151 (293)
T ss_pred CCeEEEEEeCCCCcHHHHHHhcCCCcccc--------------ccccccccccccCHHHHHHHHHHHHHHHHHHH---HC
Confidence 99999999999999999997542110000 00000122456899999999999999999999 88
Q ss_pred CeeeccCCCCceEEcCCCCeeecccccceecCCCCc---cccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh
Q 003504 657 PIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLD---EEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT 733 (815)
Q Consensus 657 ~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t 733 (815)
+|+||||||+||+++.++.+||+|||+++.+..... .....++..|+|||.+.... ++.++|||||||++||+++
T Consensus 152 ~ivH~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~Di~slG~il~el~~ 229 (293)
T cd05053 152 KCIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRV--YTHQSDVWSFGVLLWEIFT 229 (293)
T ss_pred CccccccceeeEEEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCC--cCcccceeehhhHHHHHhc
Confidence 999999999999999999999999999987653321 12223567899999886655 6889999999999999998
Q ss_pred -CCCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhhh
Q 003504 734 -GKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDIE 812 (815)
Q Consensus 734 -g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~ 812 (815)
|..||......+. . . ..... .....+..++..+.+++.+||..+|++|||+.++++.|+++.
T Consensus 230 ~g~~p~~~~~~~~~----~---~-~~~~~---------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 230 LGGSPYPGIPVEEL----F---K-LLKEG---------YRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred CCCCCCCCCCHHHH----H---H-HHHcC---------CcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 9999865322111 1 1 11111 111123345667899999999999999999999999999874
No 122
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=8.2e-37 Score=318.26 Aligned_cols=245 Identities=23% Similarity=0.351 Sum_probs=193.9
Q ss_pred eecccCCeeeEEEEcC---CCcEEEEEEeecCCc-ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeCCCCC
Q 003504 515 LLAEGKFGPVYRGFLP---GGIHVAVKVLVHGST-LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGN 590 (815)
Q Consensus 515 ~ig~G~~g~Vy~~~~~---~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gs 590 (815)
.||+|+||.||+|.+. ++..||+|++..... ...+.+.+|+.++++++||||+++++++. .+..++||||+++|+
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~ 80 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP 80 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence 3899999999999753 456799999865432 22456899999999999999999999885 457889999999999
Q ss_pred hhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCceEE
Q 003504 591 LQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYL 670 (815)
Q Consensus 591 L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NIll 670 (815)
|.+++... ...+++..+.+++.|++.||+||| +.+++||||||+||++
T Consensus 81 L~~~l~~~-----------------------------~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nil~ 128 (257)
T cd05115 81 LNKFLSGK-----------------------------KDEITVSNVVELMHQVSMGMKYLE---GKNFVHRDLAARNVLL 128 (257)
T ss_pred HHHHHHhC-----------------------------CCCCCHHHHHHHHHHHHHHHHHHH---hcCeeecccchheEEE
Confidence 99998642 235788999999999999999999 7899999999999999
Q ss_pred cCCCCeeecccccceecCCCCc----cccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCCcc
Q 003504 671 DMNLEPRLSDFGLAKIFGNGLD----EEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GKKPLGDDYPEE 745 (815)
Q Consensus 671 ~~~~~~kl~Dfgla~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~~ 745 (815)
+.++.+||+|||+++....... .....++..|+|||.+.... ++.++|||||||++||+++ |+.||......
T Consensus 129 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~Di~slG~~l~el~~~g~~p~~~~~~~- 205 (257)
T cd05115 129 VNQHYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFRK--FSSRSDVWSYGITMWEAFSYGQKPYKKMKGP- 205 (257)
T ss_pred cCCCcEEeccCCccccccCCccceeccCCCCCCcccCCHHHHccCC--CCchhhHHHHHHHHHHHhcCCCCCcCcCCHH-
Confidence 9999999999999986543321 11122357899999887655 6889999999999999997 99999753221
Q ss_pred ccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhh
Q 003504 746 KEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDI 811 (815)
Q Consensus 746 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 811 (815)
.+.. .+... .....+..++.++.+++.+||..+|++||++.+|.+.|+.+
T Consensus 206 ---~~~~----~~~~~---------~~~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 206 ---EVMS----FIEQG---------KRLDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred ---HHHH----HHHCC---------CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 1111 11111 11122344567889999999999999999999999999864
No 123
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=3.1e-36 Score=315.89 Aligned_cols=260 Identities=24% Similarity=0.388 Sum_probs=209.2
Q ss_pred cCCCCCCeecccCCeeeEEEEcC-CCcEEEEEEeecCC---cccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEE
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFLP-GGIHVAVKVLVHGS---TLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIY 583 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 583 (815)
++|++.+.||+|+||.||+|... +|+.||+|.++... ....+.+.+|++++++++|+|++++++++...+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 57888999999999999999965 78999999886422 223567889999999999999999999999999999999
Q ss_pred EeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccC
Q 003504 584 DYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDI 663 (815)
Q Consensus 584 ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDl 663 (815)
||+++|+|.+++.... .....+++..+..++.+++.||+||| +.+++||||
T Consensus 82 e~~~~~~L~~~l~~~~--------------------------~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl 132 (267)
T cd08224 82 ELADAGDLSRMIKHFK--------------------------KQKRLIPERTIWKYFVQLCSALEHMH---SKRIMHRDI 132 (267)
T ss_pred ecCCCCCHHHHHHHhc--------------------------ccCCCcCHHHHHHHHHHHHHHHHHHH---hCCEecCCc
Confidence 9999999999986421 12345788899999999999999999 899999999
Q ss_pred CCCceEEcCCCCeeecccccceecCCCC-ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCC
Q 003504 664 KASSVYLDMNLEPRLSDFGLAKIFGNGL-DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDY 742 (815)
Q Consensus 664 k~~NIll~~~~~~kl~Dfgla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~ 742 (815)
+|+||+++.++.++|+|||+++...... ......|+..|+|||.+.+.. ++.++|||||||++||+++|+.||....
T Consensus 133 ~p~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~--~~~~~Di~slG~il~~l~~g~~p~~~~~ 210 (267)
T cd08224 133 KPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENG--YNFKSDIWSLGCLLYEMAALQSPFYGDK 210 (267)
T ss_pred ChhhEEECCCCcEEEeccceeeeccCCCcccceecCCccccCHHHhccCC--CCchhcHHHHHHHHHHHHHCCCCcccCC
Confidence 9999999999999999999988654322 223345888999999987655 6889999999999999999999986422
Q ss_pred CccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhhh
Q 003504 743 PEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDIE 812 (815)
Q Consensus 743 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~ 812 (815)
....+....... . . .........+..+.+++.+||..+|++||++.+|+++|+++.
T Consensus 211 -----~~~~~~~~~~~~-~----~----~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 211 -----MNLYSLCKKIEK-C----D----YPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred -----ccHHHHHhhhhc-C----C----CCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 112222221111 1 0 111112245668899999999999999999999999999875
No 124
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=3e-37 Score=335.58 Aligned_cols=263 Identities=21% Similarity=0.284 Sum_probs=193.7
Q ss_pred CCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCC--cccHHHHHHHHHHhcCCCCCCceeeeeEEEeCC-----eeE
Q 003504 509 NFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGS--TLTDQEAARELEYLGRIKHPNLVPLTGYCIAGD-----QRI 580 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~-----~~~ 580 (815)
+|++.+.||+|+||.||+|+. .++..||||++.... ......+.+|++++++++||||+++++++.... ..+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 477789999999999999994 578999999986432 223456889999999999999999999886532 479
Q ss_pred EEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeee
Q 003504 581 AIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIH 660 (815)
Q Consensus 581 lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivH 660 (815)
+||||+. ++|.+++.. ...+++.....++.|++.||+||| +.+|+|
T Consensus 81 lv~e~~~-~~L~~~l~~------------------------------~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH 126 (338)
T cd07859 81 VVFELME-SDLHQVIKA------------------------------NDDLTPEHHQFFLYQLLRALKYIH---TANVFH 126 (338)
T ss_pred EEEecCC-CCHHHHHHh------------------------------cccCCHHHHHHHHHHHHHHHHHHH---HCCeec
Confidence 9999996 689888864 234788899999999999999999 889999
Q ss_pred ccCCCCceEEcCCCCeeecccccceecCCCC----ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCC
Q 003504 661 RDIKASSVYLDMNLEPRLSDFGLAKIFGNGL----DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKK 736 (815)
Q Consensus 661 rDlk~~NIll~~~~~~kl~Dfgla~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~ 736 (815)
|||||+|||++.++.+||+|||+++...... ......|++.|+|||++.+....++.++|||||||++|||++|+.
T Consensus 127 ~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~ 206 (338)
T cd07859 127 RDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKP 206 (338)
T ss_pred CCCCHHHeEECCCCcEEEccCccccccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCC
Confidence 9999999999999999999999998653221 113346899999999987643337889999999999999999999
Q ss_pred CCCCCCCccccccHHH--------HHHHHHhcCCCCccc---cccccC---CCCHHHHHHHHHHHhhccccCCCCCCCHH
Q 003504 737 PLGDDYPEEKEGNLVS--------WVRGLVRNNKGSRAI---DPKIRD---TGPEKQMEEALKIGYLCTADLPLKRPSMQ 802 (815)
Q Consensus 737 p~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~---~~~~~~---~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ 802 (815)
||...........+.. +... +......+.+ .+.... ......+.++.+++.+||+.||++||+++
T Consensus 207 pf~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~ 285 (338)
T cd07859 207 LFPGKNVVHQLDLITDLLGTPSPETISR-VRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAE 285 (338)
T ss_pred CCCCCChHHHHHHHHHHhCCCCHHHHHH-hhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHH
Confidence 9975322111000000 0000 0000000000 000000 00112345678999999999999999999
Q ss_pred HHHH
Q 003504 803 QIVG 806 (815)
Q Consensus 803 ~v~~ 806 (815)
++++
T Consensus 286 e~l~ 289 (338)
T cd07859 286 EALA 289 (338)
T ss_pred HHhc
Confidence 9985
No 125
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=7e-37 Score=322.48 Aligned_cols=246 Identities=23% Similarity=0.268 Sum_probs=194.2
Q ss_pred ecccCCeeeEEEEc-CCCcEEEEEEeecCCc---ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeCCCCCh
Q 003504 516 LAEGKFGPVYRGFL-PGGIHVAVKVLVHGST---LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNL 591 (815)
Q Consensus 516 ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL 591 (815)
||+|+||.||++.. .+|+.||+|.+..... .....+..|++++++++||||+++++++.+....++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 69999999999985 5689999999864221 2234556799999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCceEEc
Q 003504 592 QNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLD 671 (815)
Q Consensus 592 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NIll~ 671 (815)
.+++... ....+++..+..++.|++.||+||| +.+|+||||||+||+++
T Consensus 81 ~~~~~~~----------------------------~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dikp~Nili~ 129 (277)
T cd05607 81 KYHIYNV----------------------------GERGLEMERVIHYSAQITCGILHLH---SMDIVYRDMKPENVLLD 129 (277)
T ss_pred HHHHHhc----------------------------cccCCCHHHHHHHHHHHHHHHHHHH---HCCEEEccCChHhEEEc
Confidence 9888642 1335788889999999999999999 89999999999999999
Q ss_pred CCCCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCccccccHH
Q 003504 672 MNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLV 751 (815)
Q Consensus 672 ~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~ 751 (815)
.++.+||+|||++.............|+..|+|||++.+.. ++.++|||||||++|||++|+.||........ ..
T Consensus 130 ~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~---~~ 204 (277)
T cd05607 130 DQGNCRLSDLGLAVELKDGKTITQRAGTNGYMAPEILKEEP--YSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVA---KE 204 (277)
T ss_pred CCCCEEEeeceeeeecCCCceeeccCCCCCccCHHHHccCC--CCCchhHHHHHHHHHHHHhCCCCCCCCcchhh---HH
Confidence 99999999999998776544444456899999999987766 78999999999999999999999975321111 11
Q ss_pred HHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003504 752 SWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGL 807 (815)
Q Consensus 752 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~ 807 (815)
......... .... .....+.++.+++.+||+.||++||+++|+++.
T Consensus 205 ~~~~~~~~~---------~~~~-~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ 250 (277)
T cd05607 205 ELKRRTLED---------EVKF-EHQNFTEESKDICRLFLAKKPEDRLGSREKNDD 250 (277)
T ss_pred HHHHHhhcc---------cccc-ccccCCHHHHHHHHHHhccCHhhCCCCccchhh
Confidence 111111111 0100 012345678999999999999999999776543
No 126
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=7.9e-37 Score=322.77 Aligned_cols=266 Identities=24% Similarity=0.319 Sum_probs=205.4
Q ss_pred cCCCCCCeecccCCeeeEEEEc------CCCcEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEE
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFL------PGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIA 581 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 581 (815)
.+|+..+.||+|+||.||+|.. .++..+|+|.+..........+.+|++++++++||||+++++++......++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM 84 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence 4577789999999999999973 2356899999876555556789999999999999999999999999999999
Q ss_pred EEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeec
Q 003504 582 IYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHR 661 (815)
Q Consensus 582 v~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHr 661 (815)
||||+++|+|.++++......... . .........+++..++.++.|++.|++||| +.+++||
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~--------~-------~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~~i~H~ 146 (280)
T cd05092 85 VFEYMRHGDLNRFLRSHGPDAKIL--------A-------GGEDVAPGQLTLGQMLAIASQIASGMVYLA---SLHFVHR 146 (280)
T ss_pred EEecCCCCCHHHHHHhcCcchhhh--------c-------ccccCCccccCHHHHHHHHHHHHHHHHHHH---HCCeecc
Confidence 999999999999997542110000 0 000112345789999999999999999999 8999999
Q ss_pred cCCCCceEEcCCCCeeecccccceecCCCCc---cccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CCCC
Q 003504 662 DIKASSVYLDMNLEPRLSDFGLAKIFGNGLD---EEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GKKP 737 (815)
Q Consensus 662 Dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p 737 (815)
||||+||++++++.+||+|||+++....... .....+++.|+|||.+.+.. ++.++|||||||++|||++ |+.|
T Consensus 147 dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~Di~slG~il~el~~~g~~p 224 (280)
T cd05092 147 DLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRK--FTTESDIWSFGVVLWEIFTYGKQP 224 (280)
T ss_pred cccHhhEEEcCCCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCC--cCchhhHHHHHHHHHHHHcCCCCC
Confidence 9999999999999999999999986543221 12223567899999887665 7899999999999999998 8999
Q ss_pred CCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHh
Q 003504 738 LGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKD 810 (815)
Q Consensus 738 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~ 810 (815)
|......+ . +....... ....+..++..+.+++.+||+.||++||++.+|++.|++
T Consensus 225 ~~~~~~~~----~---~~~~~~~~----------~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 225 WYQLSNTE----A---IECITQGR----------ELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred CccCCHHH----H---HHHHHcCc----------cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 86432211 1 11111110 001123345678899999999999999999999998863
No 127
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=9e-37 Score=318.89 Aligned_cols=254 Identities=28% Similarity=0.426 Sum_probs=206.2
Q ss_pred hcCCCCCCeecccCCeeeEEEEcCCCcEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeC
Q 003504 507 TSNFDRGTLLAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYM 586 (815)
Q Consensus 507 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 586 (815)
.++|.+.+.||+|+||.||+|..++++.||||.+... ....+++.+|+.++++++||||+++++++......++||||+
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 83 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPG-TMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYM 83 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCC-ccCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEecc
Confidence 4678889999999999999999888889999998753 345678999999999999999999999999888999999999
Q ss_pred CCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCC
Q 003504 587 ENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKAS 666 (815)
Q Consensus 587 ~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~ 666 (815)
++++|.++++.. ....+++..+..++.+++.|++||| +.+++||||||+
T Consensus 84 ~~~~L~~~i~~~----------------------------~~~~~~~~~~~~~~~~i~~al~~lh---~~~i~h~di~p~ 132 (261)
T cd05034 84 SKGSLLDFLKSG----------------------------EGKKLRLPQLVDMAAQIAEGMAYLE---SRNYIHRDLAAR 132 (261)
T ss_pred CCCCHHHHHhcc----------------------------ccCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcchh
Confidence 999999999752 1345789999999999999999999 789999999999
Q ss_pred ceEEcCCCCeeecccccceecCCCCc--cccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCC
Q 003504 667 SVYLDMNLEPRLSDFGLAKIFGNGLD--EEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GKKPLGDDYP 743 (815)
Q Consensus 667 NIll~~~~~~kl~Dfgla~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~ 743 (815)
||++++++.+||+|||.++....... .....++..|+|||.+.+.. ++.++|||||||++||+++ |+.||.....
T Consensus 133 nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~--~~~~~Di~slG~il~~l~t~g~~p~~~~~~ 210 (261)
T cd05034 133 NILVGENLVCKIADFGLARLIEDDEYTAREGAKFPIKWTAPEAANYGR--FTIKSDVWSFGILLTEIVTYGRVPYPGMTN 210 (261)
T ss_pred eEEEcCCCCEEECccccceeccchhhhhhhccCCCccccCHHHhccCC--cCchhHHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 99999999999999999987653221 11223456899999987655 6889999999999999999 9999864321
Q ss_pred ccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhh
Q 003504 744 EEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDI 811 (815)
Q Consensus 744 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 811 (815)
. ......... .....+...+.++.+++.+|+..+|++||+++++.+.|+.+
T Consensus 211 ~-------~~~~~~~~~----------~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~~ 261 (261)
T cd05034 211 R-------EVLEQVERG----------YRMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLEDY 261 (261)
T ss_pred H-------HHHHHHHcC----------CCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhcC
Confidence 1 111111111 01111223356789999999999999999999999998753
No 128
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=3.6e-37 Score=310.33 Aligned_cols=265 Identities=23% Similarity=0.304 Sum_probs=203.3
Q ss_pred CCCCCCeecccCCeeeEEEE-cCCCcEEEEEEeecCCc--ccHHHHHHHHHHhcCCCCCC-ceeeeeEEEeCC------e
Q 003504 509 NFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHGST--LTDQEAARELEYLGRIKHPN-LVPLTGYCIAGD------Q 578 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~n-iv~l~g~~~~~~------~ 578 (815)
.|+..+.||+|+||+||+|+ ..+|+.||+|+++-... .......+|+.++.+++|+| ||++++++...+ .
T Consensus 12 ~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~ 91 (323)
T KOG0594|consen 12 DYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGK 91 (323)
T ss_pred HHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccce
Confidence 45556789999999999999 56789999999976433 34556789999999999999 999999998877 6
Q ss_pred eEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCe
Q 003504 579 RIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPI 658 (815)
Q Consensus 579 ~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~i 658 (815)
.++||||++. +|..++...++. ...++-.....++.|+.+||+||| +++|
T Consensus 92 l~lvfe~~d~-DL~~ymd~~~~~--------------------------~~g~~~~~ik~~m~Qll~gl~~~H---~~~I 141 (323)
T KOG0594|consen 92 LYLVFEFLDR-DLKKYMDSLPKK--------------------------PQGLPPRLIKSFMRQLLRGLAFLH---SHGI 141 (323)
T ss_pred EEEEEEeecc-cHHHHHHhcccc--------------------------ccCCCHHHHHHHHHHHHHHHHHHH---hCCe
Confidence 7899999988 999999764311 023444778899999999999999 8999
Q ss_pred eeccCCCCceEEcCCCCeeecccccceecC-CCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCC
Q 003504 659 IHRDIKASSVYLDMNLEPRLSDFGLAKIFG-NGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKP 737 (815)
Q Consensus 659 vHrDlk~~NIll~~~~~~kl~Dfgla~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p 737 (815)
+||||||.||||+++|.+||+|||+|+... +.......++|.+|+|||++.+... |+...||||+||++.||++++.-
T Consensus 142 lHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~~~yt~evvTlWYRaPEvLlGs~~-Ys~~vDiWs~GcIfaEm~~~~~L 220 (323)
T KOG0594|consen 142 LHRDLKPQNLLISSSGVLKLADFGLARAFSIPMRTYTPEVVTLWYRAPEVLLGSTS-YSTSVDIWSLGCIFAEMFTRRPL 220 (323)
T ss_pred ecccCCcceEEECCCCcEeeeccchHHHhcCCcccccccEEEeeccCHHHhcCCCc-CCCCcchHhHHHHHHHHHhCCCC
Confidence 999999999999999999999999999776 3334566779999999999998865 78899999999999999999998
Q ss_pred CCCCCCccccccHHHHHHHH--H-hcCCCCcccccccc----CCC-CH-------HHHHHHHHHHhhccccCCCCCCCHH
Q 003504 738 LGDDYPEEKEGNLVSWVRGL--V-RNNKGSRAIDPKIR----DTG-PE-------KQMEEALKIGYLCTADLPLKRPSMQ 802 (815)
Q Consensus 738 ~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~----~~~-~~-------~~~~~~~~l~~~Cl~~dP~~RPs~~ 802 (815)
|.+.... .++....+.+ . .+.|.....-|... ... +. .......+++.+|++.+|..|.|++
T Consensus 221 FpG~se~---~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~ 297 (323)
T KOG0594|consen 221 FPGDSEI---DQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAK 297 (323)
T ss_pred CCCCcHH---HHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHH
Confidence 8864431 1222221111 0 01111100001111 000 11 1124788999999999999999999
Q ss_pred HHHHH
Q 003504 803 QIVGL 807 (815)
Q Consensus 803 ~v~~~ 807 (815)
.++++
T Consensus 298 ~al~h 302 (323)
T KOG0594|consen 298 GALTH 302 (323)
T ss_pred HHhcC
Confidence 99875
No 129
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=1.1e-36 Score=316.17 Aligned_cols=245 Identities=25% Similarity=0.370 Sum_probs=197.7
Q ss_pred CeecccCCeeeEEEEcCCCcEEEEEEeecCCc-ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeCCCCChh
Q 003504 514 TLLAEGKFGPVYRGFLPGGIHVAVKVLVHGST-LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQ 592 (815)
Q Consensus 514 ~~ig~G~~g~Vy~~~~~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL~ 592 (815)
+.||+|+||.||+|...++..||+|.+..... .....+.+|++++++++||||+++++++......++||||+++|+|.
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 80 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL 80 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence 46899999999999988899999999865432 22446889999999999999999999999999999999999999999
Q ss_pred hhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCceEEcC
Q 003504 593 NLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDM 672 (815)
Q Consensus 593 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NIll~~ 672 (815)
+++... ...+++..+..++.|++.||.|+| +.+++||||||+||+++.
T Consensus 81 ~~~~~~-----------------------------~~~~~~~~~~~~~~~i~~~l~~lH---~~~~~H~dl~p~nili~~ 128 (250)
T cd05085 81 SFLRKK-----------------------------KDELKTKQLVKFALDAAAGMAYLE---SKNCIHRDLAARNCLVGE 128 (250)
T ss_pred HHHHhc-----------------------------CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccChheEEEcC
Confidence 998642 234689999999999999999999 899999999999999999
Q ss_pred CCCeeecccccceecCCCCcc--ccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCCcccccc
Q 003504 673 NLEPRLSDFGLAKIFGNGLDE--EIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGN 749 (815)
Q Consensus 673 ~~~~kl~Dfgla~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~~~~~~ 749 (815)
++.+||+|||++.....+... ....++..|+|||++.+.. ++.++|||||||++||+++ |..||.......
T Consensus 129 ~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~---- 202 (250)
T cd05085 129 NNVLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNYGR--YSSESDVWSYGILLWETFSLGVCPYPGMTNQQ---- 202 (250)
T ss_pred CCeEEECCCccceeccccccccCCCCCCcccccCHHHhccCC--CCchhHHHHHHHHHHHHhcCCCCCCCCCCHHH----
Confidence 999999999999765433211 1223466799999987655 7889999999999999998 999986532211
Q ss_pred HHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 003504 750 LVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLK 809 (815)
Q Consensus 750 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~ 809 (815)
.. ...... .....+...+..+.+++.+||+.+|++||++.+++++|.
T Consensus 203 ~~----~~~~~~---------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 203 AR----EQVEKG---------YRMSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred HH----HHHHcC---------CCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 11 111111 111123345678999999999999999999999999875
No 130
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=5.2e-37 Score=327.82 Aligned_cols=269 Identities=25% Similarity=0.362 Sum_probs=202.8
Q ss_pred cCCCCCCeecccCCeeeEEEEcC-CCc--EEEEEEeecCC-cccHHHHHHHHHHhcCC-CCCCceeeeeEEEeCCeeEEE
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFLP-GGI--HVAVKVLVHGS-TLTDQEAARELEYLGRI-KHPNLVPLTGYCIAGDQRIAI 582 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~--~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv 582 (815)
++|++.+.||+|+||.||+|... ++. .+|+|.+.... ......+.+|++++.++ +||||+++++++...+..++|
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv 86 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 86 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEE
Confidence 46788899999999999999964 444 46777765432 23345788999999999 899999999999999999999
Q ss_pred EEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecc
Q 003504 583 YDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRD 662 (815)
Q Consensus 583 ~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrD 662 (815)
+||+++|+|.++++...... ..... .........+++..++.++.|++.||+||| +.+++|||
T Consensus 87 ~e~~~~~~L~~~l~~~~~~~------------~~~~~--~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~gi~H~d 149 (303)
T cd05088 87 IEYAPHGNLLDFLRKSRVLE------------TDPAF--AIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRD 149 (303)
T ss_pred EEeCCCCcHHHHHHhccccc------------ccccc--cccccccCcCCHHHHHHHHHHHHHHHHHHH---hCCccccc
Confidence 99999999999997532110 00000 000112346889999999999999999999 89999999
Q ss_pred CCCCceEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCC
Q 003504 663 IKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GKKPLGDD 741 (815)
Q Consensus 663 lk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~ 741 (815)
|||+|||++.++.+||+|||+++............++..|+|||++.... ++.++|||||||++||++| |..||...
T Consensus 150 lkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~Di~slG~il~ellt~g~~p~~~~ 227 (303)
T cd05088 150 LAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSV--YTTNSDVWSYGVLLWEIVSLGGTPYCGM 227 (303)
T ss_pred cchheEEecCCCcEEeCccccCcccchhhhcccCCCcccccCHHHHhccC--CcccccchhhhhHHHHHHhcCCCCcccC
Confidence 99999999999999999999987433222222223466899999886655 6889999999999999998 99998643
Q ss_pred CCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhhh
Q 003504 742 YPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDIE 812 (815)
Q Consensus 742 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~ 812 (815)
...+ .. ... .. ......+...+.++.+++.+||+.+|++||+++++++.|+++.
T Consensus 228 ~~~~----~~---~~~-~~---------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~ 281 (303)
T cd05088 228 TCAE----LY---EKL-PQ---------GYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 281 (303)
T ss_pred ChHH----HH---HHH-hc---------CCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 2211 11 111 11 0111112234567899999999999999999999999998764
No 131
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=4.3e-37 Score=325.46 Aligned_cols=266 Identities=21% Similarity=0.255 Sum_probs=202.9
Q ss_pred CCCCCCeecccCCeeeEEEEcC------CCcEEEEEEeecCCcc-cHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEE
Q 003504 509 NFDRGTLLAEGKFGPVYRGFLP------GGIHVAVKVLVHGSTL-TDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIA 581 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 581 (815)
+|.+.+.||+|+||.||+|... ++..||||++...... ....+.+|+.++.+++||||+++++++...+..++
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~ 85 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSM 85 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEE
Confidence 3556789999999999999853 2578999998754322 23568899999999999999999999999999999
Q ss_pred EEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeec
Q 003504 582 IYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHR 661 (815)
Q Consensus 582 v~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHr 661 (815)
++||+++++|.+++......... .. ..........+++..+.+++.|++.||+||| +.+|+||
T Consensus 86 ~~e~~~~~~l~~~l~~~~~~~~~-~~-------------~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH---~~gi~H~ 148 (283)
T cd05091 86 IFSYCSHSDLHEFLVMRSPHSDV-GS-------------TDDDKTVKSTLEPADFVHIVTQIAAGMEFLS---SHHVVHK 148 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCccc-cc-------------cccccccccccCHHHHHHHHHHHHHHHHHHH---HcCcccc
Confidence 99999999999999643211000 00 0000112345788899999999999999999 8899999
Q ss_pred cCCCCceEEcCCCCeeecccccceecCCCCc---cccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CCCC
Q 003504 662 DIKASSVYLDMNLEPRLSDFGLAKIFGNGLD---EEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GKKP 737 (815)
Q Consensus 662 Dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p 737 (815)
||||+||++++++.+||+|||+++....... .....+++.|+|||.+.... ++.++|||||||++|||++ |..|
T Consensus 149 dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~Dv~slG~~l~el~~~g~~p 226 (283)
T cd05091 149 DLATRNVLVFDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGK--FSIDSDIWSYGVVLWEVFSYGLQP 226 (283)
T ss_pred ccchhheEecCCCceEecccccccccccchheeeccCccCCccccCHHHHhcCC--CCcchhHHHHHHHHHHHHcCCCCC
Confidence 9999999999999999999999886643221 12233577899999987655 6889999999999999998 8888
Q ss_pred CCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHh
Q 003504 738 LGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKD 810 (815)
Q Consensus 738 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~ 810 (815)
|.+... ..+........ . ...+..++..+.+++..||+.+|++||++++|+..|+.
T Consensus 227 ~~~~~~-------~~~~~~i~~~~-~---------~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 227 YCGYSN-------QDVIEMIRNRQ-V---------LPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred CCCCCH-------HHHHHHHHcCC-c---------CCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 865322 11222222111 0 11234456778999999999999999999999999874
No 132
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=8.9e-37 Score=325.74 Aligned_cols=256 Identities=30% Similarity=0.419 Sum_probs=203.3
Q ss_pred hcCCCCCCeecccCCeeeEEEEc------CCCcEEEEEEeecCCc-ccHHHHHHHHHHhcCC-CCCCceeeeeEEEeCCe
Q 003504 507 TSNFDRGTLLAEGKFGPVYRGFL------PGGIHVAVKVLVHGST-LTDQEAARELEYLGRI-KHPNLVPLTGYCIAGDQ 578 (815)
Q Consensus 507 ~~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~ 578 (815)
.++|.+.+.||+|+||.||+|.. .++..||||.++.... ...+.+.+|+++++++ +||||+++++++...+.
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 113 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGP 113 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCc
Confidence 35688899999999999999973 2355799999875432 2345788999999999 79999999999999999
Q ss_pred eEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCe
Q 003504 579 RIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPI 658 (815)
Q Consensus 579 ~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~i 658 (815)
.++||||+++|+|.++++.. ....+++..+..++.|++.||+||| +.+|
T Consensus 114 ~~lv~e~~~~~~L~~~i~~~----------------------------~~~~l~~~~~~~i~~~i~~~l~~lH---~~~i 162 (302)
T cd05055 114 ILVITEYCCYGDLLNFLRRK----------------------------RESFLTLEDLLSFSYQVAKGMAFLA---SKNC 162 (302)
T ss_pred eEEEEEcCCCCcHHHHHHhC----------------------------CCCCCCHHHHHHHHHHHHHHHHHHH---HCCe
Confidence 99999999999999999752 1223789999999999999999999 8899
Q ss_pred eeccCCCCceEEcCCCCeeecccccceecCCCCc---cccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-C
Q 003504 659 IHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLD---EEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-G 734 (815)
Q Consensus 659 vHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g 734 (815)
+||||||+||+++.++.+|++|||+++....... .....++..|+|||.+.... ++.++|||||||++||+++ |
T Consensus 163 vH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~DiwslGvil~el~t~g 240 (302)
T cd05055 163 IHRDLAARNVLLTHGKIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCV--YTFESDVWSYGILLWEIFSLG 240 (302)
T ss_pred ehhhhccceEEEcCCCeEEECCCcccccccCCCceeecCCCCcccccCCHhhhccCC--CCcHhHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999986643321 11223567899999887665 6889999999999999998 9
Q ss_pred CCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhh
Q 003504 735 KKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDI 811 (815)
Q Consensus 735 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 811 (815)
+.||......+ ... ...... .....+...+.++.+++.+||..+|++||++.++++.|+++
T Consensus 241 ~~p~~~~~~~~---~~~----~~~~~~---------~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 241 SNPYPGMPVDS---KFY----KLIKEG---------YRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred CCCcCCCCchH---HHH----HHHHcC---------CcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 99987532211 111 111111 11111223356789999999999999999999999999874
No 133
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=4.5e-37 Score=336.74 Aligned_cols=200 Identities=23% Similarity=0.268 Sum_probs=171.6
Q ss_pred cCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCc---ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEE
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGST---LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIY 583 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 583 (815)
++|+..+.||+|+||.||+|.. .+++.||||+++.... .....+.+|+.++.+++||||+++++++.+....++||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 4688899999999999999985 4688999999975322 22346788999999999999999999999999999999
Q ss_pred EeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccC
Q 003504 584 DYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDI 663 (815)
Q Consensus 584 ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDl 663 (815)
||+++|+|.+++.. ...+++.....++.|++.||+||| +.+||||||
T Consensus 81 E~~~gg~L~~~l~~------------------------------~~~l~~~~~~~~~~qi~~aL~~lH---~~givHrDl 127 (363)
T cd05628 81 EFLPGGDMMTLLMK------------------------------KDTLTEEETQFYIAETVLAIDSIH---QLGFIHRDI 127 (363)
T ss_pred cCCCCCcHHHHHHh------------------------------cCCCCHHHHHHHHHHHHHHHHHHH---hCCeEecCC
Confidence 99999999999964 235778888999999999999999 899999999
Q ss_pred CCCceEEcCCCCeeecccccceecCCCC------------------------------------ccccccccccccCCcc
Q 003504 664 KASSVYLDMNLEPRLSDFGLAKIFGNGL------------------------------------DEEIARGSPGYIPPEF 707 (815)
Q Consensus 664 k~~NIll~~~~~~kl~Dfgla~~~~~~~------------------------------------~~~~~~gt~~y~aPE~ 707 (815)
||+|||++.++.+||+|||+++...... .....+||+.|+|||+
T Consensus 128 Kp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~ 207 (363)
T cd05628 128 KPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEV 207 (363)
T ss_pred CHHHeEECCCCCEEEeeccCcccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHH
Confidence 9999999999999999999987543210 0123469999999999
Q ss_pred cCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCC
Q 003504 708 AQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDY 742 (815)
Q Consensus 708 ~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~ 742 (815)
+.+.. ++.++|||||||++|||++|+.||....
T Consensus 208 ~~~~~--~~~~~DvwSlGvil~ell~G~~Pf~~~~ 240 (363)
T cd05628 208 FMQTG--YNKLCDWWSLGVIMYEMLIGYPPFCSET 240 (363)
T ss_pred HcCCC--CCCchhhhhhHHHHHHHHhCCCCCCCCC
Confidence 87665 7889999999999999999999997644
No 134
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-37 Score=342.34 Aligned_cols=257 Identities=22% Similarity=0.252 Sum_probs=206.9
Q ss_pred CCCCCCeecccCCeeeEEEEcCCC-cEEEEEEeecCCcccHHHHHHHHHHhcCCC-CCCceeeeeE-EEe------CCee
Q 003504 509 NFDRGTLLAEGKFGPVYRGFLPGG-IHVAVKVLVHGSTLTDQEAARELEYLGRIK-HPNLVPLTGY-CIA------GDQR 579 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~~~~-~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~-~~~------~~~~ 579 (815)
++++.+.|.+|||+.||.|+...+ .++|+|++...+....+.+.+|+++|+.|+ |||||.+++. ... .-+.
T Consensus 38 ~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~Ev 117 (738)
T KOG1989|consen 38 RVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEV 117 (738)
T ss_pred EEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEE
Confidence 345578999999999999997655 999999987766666778999999999997 9999999993 322 1367
Q ss_pred EEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCee
Q 003504 580 IAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPII 659 (815)
Q Consensus 580 ~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~iv 659 (815)
+|.||||.+|+|-+++..+ ....++..+.++|+.|+++|+++||. +.++||
T Consensus 118 llLmEyC~gg~Lvd~mn~R----------------------------lq~~lte~eVLkIf~dv~~AVa~mH~-~~pPiI 168 (738)
T KOG1989|consen 118 LLLMEYCKGGSLVDFMNTR----------------------------LQTRLTEDEVLKIFYDVCEAVAAMHY-LKPPII 168 (738)
T ss_pred EeehhhccCCcHHHHHHHH----------------------------HhccCChHHHHHHHHHHHHHHHHHhc-CCCccc
Confidence 8999999999999999753 12237888999999999999999994 478899
Q ss_pred eccCCCCceEEcCCCCeeecccccceecCCCC----------ccccccccccccCCcccCCCCC-CCCCcCcchhHHHHH
Q 003504 660 HRDIKASSVYLDMNLEPRLSDFGLAKIFGNGL----------DEEIARGSPGYIPPEFAQPDSD-FPTPKSDVYCYGVVL 728 (815)
Q Consensus 660 HrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~----------~~~~~~gt~~y~aPE~~~~~~~-~~~~~~Dv~S~Gvvl 728 (815)
|||||-+||||+.+++.||||||.|...-... ..-...-|+.|+|||.+--..+ ..++|+|||++||+|
T Consensus 169 HRDLKiENvLls~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclL 248 (738)
T KOG1989|consen 169 HRDLKIENVLLSADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLL 248 (738)
T ss_pred hhhhhhhheEEcCCCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHH
Confidence 99999999999999999999999886432211 0111226899999998653322 158999999999999
Q ss_pred HHHHhCCCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 003504 729 LELITGKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLL 808 (815)
Q Consensus 729 ~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L 808 (815)
|-|+....||.+... ..++...+.......++..+.+||..||+.+|++||++-||++.+
T Consensus 249 YkLCy~t~PFe~sg~--------------------laIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~ 308 (738)
T KOG1989|consen 249 YKLCYFTTPFEESGK--------------------LAILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEI 308 (738)
T ss_pred HHHHHhCCCcCcCcc--------------------eeEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHH
Confidence 999999999975221 123334444443467899999999999999999999999999999
Q ss_pred Hhhhhc
Q 003504 809 KDIEST 814 (815)
Q Consensus 809 ~~i~~~ 814 (815)
.++...
T Consensus 309 ~~l~~~ 314 (738)
T KOG1989|consen 309 FELANK 314 (738)
T ss_pred HHHhcC
Confidence 988653
No 135
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=3e-37 Score=349.02 Aligned_cols=254 Identities=22% Similarity=0.293 Sum_probs=202.4
Q ss_pred HhcCCCCCCeecccCCeeeEEEE-cCCCcEEEEEEeecCC--cccHHHHHHHHHHhcCCCCCCceeeeeEEEeCC-----
Q 003504 506 ATSNFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHGS--TLTDQEAARELEYLGRIKHPNLVPLTGYCIAGD----- 577 (815)
Q Consensus 506 ~~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~----- 577 (815)
..++|.+.+.||+|+||.||+|. ..+|+.||||++.... ......+.+|+.++..++|+||+++.+.+...+
T Consensus 30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~ 109 (496)
T PTZ00283 30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPE 109 (496)
T ss_pred cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcc
Confidence 34689999999999999999998 4578999999986542 223456788999999999999999988775432
Q ss_pred ---eeEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCC
Q 003504 578 ---QRIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGC 654 (815)
Q Consensus 578 ---~~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~ 654 (815)
..++||||+++|+|.++++... .....+++.....++.|++.||+|||
T Consensus 110 ~~~~i~lV~Ey~~~gsL~~~l~~~~--------------------------~~~~~l~e~~~~~i~~qll~aL~~lH--- 160 (496)
T PTZ00283 110 NVLMIALVLDYANAGDLRQEIKSRA--------------------------KTNRTFREHEAGLLFIQVLLAVHHVH--- 160 (496)
T ss_pred cceEEEEEEeCCCCCcHHHHHHHhh--------------------------ccCCCCCHHHHHHHHHHHHHHHHHHH---
Confidence 3579999999999999997531 12345778888999999999999999
Q ss_pred CCCeeeccCCCCceEEcCCCCeeecccccceecCCCC---ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHH
Q 003504 655 SPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGL---DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLEL 731 (815)
Q Consensus 655 ~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el 731 (815)
+.+|+||||||+|||++.++.+||+|||+++.+.... ......||+.|+|||++.+.. ++.++|||||||++|||
T Consensus 161 ~~~IiHrDLKP~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~--~s~k~DVwSlGvilyeL 238 (496)
T PTZ00283 161 SKHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKP--YSKKADMFSLGVLLYEL 238 (496)
T ss_pred hCCEecCCCCHHHEEEeCCCCEEEEecccCeeccccccccccccccCCcceeCHHHhCCCC--CCcHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999998765322 233456999999999998765 78999999999999999
Q ss_pred HhCCCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003504 732 ITGKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGL 807 (815)
Q Consensus 732 ~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~ 807 (815)
++|+.||..... ...+....... .+ ..+...+.++.+++.+||+.||++||++.++++.
T Consensus 239 ltG~~Pf~~~~~-------~~~~~~~~~~~-----~~-----~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 239 LTLKRPFDGENM-------EEVMHKTLAGR-----YD-----PLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred HHCCCCCCCCCH-------HHHHHHHhcCC-----CC-----CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 999999975322 22222222111 00 1133456678999999999999999999999753
No 136
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=4.4e-37 Score=330.67 Aligned_cols=235 Identities=26% Similarity=0.321 Sum_probs=188.8
Q ss_pred CeecccCCeeeEEEEc-CCCcEEEEEEeecCC---cccHHHHHHHHHHhcCC-CCCCceeeeeEEEeCCeeEEEEEeCCC
Q 003504 514 TLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGS---TLTDQEAARELEYLGRI-KHPNLVPLTGYCIAGDQRIAIYDYMEN 588 (815)
Q Consensus 514 ~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ey~~~ 588 (815)
+.||+|+||.||+|+. .+++.||||++.... ......+.+|..++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 4699999999999995 468899999987532 22345667888888876 699999999999999999999999999
Q ss_pred CChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCce
Q 003504 589 GNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSV 668 (815)
Q Consensus 589 gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NI 668 (815)
|+|.+++.. ...+++.....++.|++.||+||| +.+|+||||||+||
T Consensus 81 g~L~~~i~~------------------------------~~~l~~~~~~~~~~ql~~~L~~lH---~~~ivH~dlkp~NI 127 (320)
T cd05590 81 GDLMFHIQK------------------------------SRRFDEARARFYAAEITSALMFLH---DKGIIYRDLKLDNV 127 (320)
T ss_pred chHHHHHHH------------------------------cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHe
Confidence 999998864 234677888899999999999999 89999999999999
Q ss_pred EEcCCCCeeecccccceecCC-CCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCcccc
Q 003504 669 YLDMNLEPRLSDFGLAKIFGN-GLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKE 747 (815)
Q Consensus 669 ll~~~~~~kl~Dfgla~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~ 747 (815)
|++.++.+||+|||+++.... +.......||+.|+|||++.+.. ++.++|||||||++|||++|+.||......
T Consensus 128 li~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DiwslG~il~el~~g~~Pf~~~~~~--- 202 (320)
T cd05590 128 LLDHEGHCKLADFGMCKEGIFNGKTTSTFCGTPDYIAPEILQEML--YGPSVDWWAMGVLLYEMLCGHAPFEAENED--- 202 (320)
T ss_pred EECCCCcEEEeeCCCCeecCcCCCcccccccCccccCHHHHcCCC--CCCccchhhhHHHHHHHhhCCCCCCCCCHH---
Confidence 999999999999999876432 22334456999999999987665 688999999999999999999999753321
Q ss_pred ccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCH
Q 003504 748 GNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSM 801 (815)
Q Consensus 748 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~ 801 (815)
.......... . ..+...+.++.+++.+|++.||++||++
T Consensus 203 ----~~~~~i~~~~----~-------~~~~~~~~~~~~li~~~L~~dP~~R~~~ 241 (320)
T cd05590 203 ----DLFEAILNDE----V-------VYPTWLSQDAVDILKAFMTKNPTMRLGS 241 (320)
T ss_pred ----HHHHHHhcCC----C-------CCCCCCCHHHHHHHHHHcccCHHHCCCC
Confidence 1112222111 1 1122345678899999999999999998
No 137
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=8.8e-37 Score=320.10 Aligned_cols=253 Identities=25% Similarity=0.410 Sum_probs=202.0
Q ss_pred cCCCCCCeecccCCeeeEEEEcC----CCcEEEEEEeecCCc-ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEE
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFLP----GGIHVAVKVLVHGST-LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAI 582 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv 582 (815)
++|.+.+.||+|+||.||+|+.. .+..+|+|.+..... ...+.+.+|+.++.+++||||+++++++...+..++|
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 46788899999999999999853 234799998865332 2345789999999999999999999999999999999
Q ss_pred EEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecc
Q 003504 583 YDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRD 662 (815)
Q Consensus 583 ~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrD 662 (815)
|||+++|+|.+++... ...+++..+..++.|++.||+||| +.+++|||
T Consensus 84 ~e~~~~~~L~~~~~~~-----------------------------~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~h~d 131 (267)
T cd05066 84 TEYMENGSLDAFLRKH-----------------------------DGQFTVIQLVGMLRGIASGMKYLS---DMGYVHRD 131 (267)
T ss_pred EEcCCCCCHHHHHHhc-----------------------------CCCCCHHHHHHHHHHHHHHHHHHH---HCCEeehh
Confidence 9999999999999752 235788999999999999999999 89999999
Q ss_pred CCCCceEEcCCCCeeecccccceecCCCCcc----ccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CCCC
Q 003504 663 IKASSVYLDMNLEPRLSDFGLAKIFGNGLDE----EIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GKKP 737 (815)
Q Consensus 663 lk~~NIll~~~~~~kl~Dfgla~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p 737 (815)
|||+||+++.++.+||+|||++......... ....++..|+|||++.+.. ++.++||||||+++||+++ |+.|
T Consensus 132 lkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~--~~~~~Dv~slG~~l~ell~~g~~p 209 (267)
T cd05066 132 LAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRK--FTSASDVWSYGIVMWEVMSYGERP 209 (267)
T ss_pred hchhcEEECCCCeEEeCCCCcccccccccceeeecCCCccceeecCHhHhccCc--cCchhhhHHHHHHHHHHhcCCCCC
Confidence 9999999999999999999999876543211 1122356799999987655 7889999999999999887 9999
Q ss_pred CCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhh
Q 003504 738 LGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDI 811 (815)
Q Consensus 738 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 811 (815)
|......+ ... ... .. . ....+...+..+.+++.+||+.+|++||+|.++++.|+++
T Consensus 210 ~~~~~~~~----~~~---~~~-~~--~-------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 210 YWEMSNQD----VIK---AIE-EG--Y-------RLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred cccCCHHH----HHH---HHh-CC--C-------cCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 87533221 111 111 11 0 0111233456789999999999999999999999999875
No 138
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=5e-37 Score=330.71 Aligned_cols=240 Identities=26% Similarity=0.323 Sum_probs=191.5
Q ss_pred CeecccCCeeeEEEEc-CCCcEEEEEEeecCC---cccHHHHHHHHHHhcCC-CCCCceeeeeEEEeCCeeEEEEEeCCC
Q 003504 514 TLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGS---TLTDQEAARELEYLGRI-KHPNLVPLTGYCIAGDQRIAIYDYMEN 588 (815)
Q Consensus 514 ~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ey~~~ 588 (815)
+.||+|+||.||+|+. .+++.||||++.... ......+..|.+++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 4699999999999995 457899999987532 22334567888888866 799999999999999999999999999
Q ss_pred CChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCce
Q 003504 589 GNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSV 668 (815)
Q Consensus 589 gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NI 668 (815)
|+|..++.. ...+++.....++.|++.||+||| +.+|+||||||+||
T Consensus 81 ~~L~~~l~~------------------------------~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDikp~Ni 127 (321)
T cd05591 81 GDLMFQIQR------------------------------SRKFDEPRSRFYAAEVTLALMFLH---RHGVIYRDLKLDNI 127 (321)
T ss_pred CcHHHHHHH------------------------------cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHe
Confidence 999998864 234678888999999999999999 88999999999999
Q ss_pred EEcCCCCeeecccccceecCC-CCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCcccc
Q 003504 669 YLDMNLEPRLSDFGLAKIFGN-GLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKE 747 (815)
Q Consensus 669 ll~~~~~~kl~Dfgla~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~ 747 (815)
+++.++.+||+|||+++.... ........||+.|+|||++.... ++.++|||||||++|||++|+.||......+
T Consensus 128 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwslG~il~el~tg~~Pf~~~~~~~-- 203 (321)
T cd05591 128 LLDAEGHCKLADFGMCKEGILNGVTTTTFCGTPDYIAPEILQELE--YGPSVDWWALGVLMYEMMAGQPPFEADNEDD-- 203 (321)
T ss_pred EECCCCCEEEeecccceecccCCccccccccCccccCHHHHcCCC--CCCccceechhHHHHHHhcCCCCCCCCCHHH--
Confidence 999999999999999976432 22233456899999999987665 7889999999999999999999997533211
Q ss_pred ccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCC-------CHHHHHH
Q 003504 748 GNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRP-------SMQQIVG 806 (815)
Q Consensus 748 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-------s~~~v~~ 806 (815)
......... . ..+...+.++.+++.+|++.||++|| +++++++
T Consensus 204 -----~~~~i~~~~----~-------~~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~ 253 (321)
T cd05591 204 -----LFESILHDD----V-------LYPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQ 253 (321)
T ss_pred -----HHHHHHcCC----C-------CCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhc
Confidence 112222111 0 01222456788999999999999999 7777764
No 139
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.4e-36 Score=323.39 Aligned_cols=248 Identities=23% Similarity=0.380 Sum_probs=202.4
Q ss_pred cCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeC
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYM 586 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 586 (815)
.+|+..+.||+|+||.||+|.. .++..||+|.+........+.+.+|+.+++.++||||+++++++......++||||+
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~ 99 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 99 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeeccc
Confidence 4688889999999999999984 568899999987655555677899999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCC
Q 003504 587 ENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKAS 666 (815)
Q Consensus 587 ~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~ 666 (815)
++|+|.++++. ..+++..+..++.|++.||+||| +.+|+||||||+
T Consensus 100 ~~~~L~~~~~~-------------------------------~~~~~~~~~~i~~ql~~aL~~LH---~~gi~H~dLkp~ 145 (296)
T cd06654 100 AGGSLTDVVTE-------------------------------TCMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSD 145 (296)
T ss_pred CCCCHHHHHHh-------------------------------cCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHH
Confidence 99999999864 13678888999999999999999 889999999999
Q ss_pred ceEEcCCCCeeecccccceecCCCC-ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCcc
Q 003504 667 SVYLDMNLEPRLSDFGLAKIFGNGL-DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEE 745 (815)
Q Consensus 667 NIll~~~~~~kl~Dfgla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~ 745 (815)
||+++.++.+||+|||++....... ......|++.|+|||.+.+.. ++.++|||||||++|||++|+.||....+.+
T Consensus 146 Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~ 223 (296)
T cd06654 146 NILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKA--YGPKVDIWSLGIMAIEMIEGEPPYLNENPLR 223 (296)
T ss_pred HEEEcCCCCEEECccccchhccccccccCcccCCccccCHHHHcCCC--CCccchHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 9999999999999999988654332 123346889999999987655 6889999999999999999999997533211
Q ss_pred ccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 746 KEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 746 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
.+. ...... .+ ....+...+..+.+++.+||..+|++||++.++++
T Consensus 224 ------~~~-~~~~~~------~~--~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 224 ------ALY-LIATNG------TP--ELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred ------hHH-HHhcCC------CC--CCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence 111 111110 00 11123445567889999999999999999999986
No 140
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=7.4e-37 Score=328.34 Aligned_cols=239 Identities=24% Similarity=0.302 Sum_probs=188.1
Q ss_pred CeecccCCeeeEEEEc-CCCcEEEEEEeecCC---cccHHHHHHHHHHhcCC-CCCCceeeeeEEEeCCeeEEEEEeCCC
Q 003504 514 TLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGS---TLTDQEAARELEYLGRI-KHPNLVPLTGYCIAGDQRIAIYDYMEN 588 (815)
Q Consensus 514 ~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ey~~~ 588 (815)
+.||+|+||.||+|.. .++..||||+++... ....+.+..|..++... +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 4799999999999995 457889999987532 12234455677777654 899999999999999999999999999
Q ss_pred CChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCce
Q 003504 589 GNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSV 668 (815)
Q Consensus 589 gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NI 668 (815)
|+|..++... ..++......++.|++.||+||| +.+|+||||||+||
T Consensus 81 g~L~~~~~~~------------------------------~~~~~~~~~~~~~qi~~al~~LH---~~~ivH~dlkp~Ni 127 (316)
T cd05592 81 GDLMFHIQSS------------------------------GRFDEARARFYAAEIICGLQFLH---KKGIIYRDLKLDNV 127 (316)
T ss_pred CcHHHHHHHc------------------------------CCCCHHHHHHHHHHHHHHHHHHH---HCCEEeCCCCHHHe
Confidence 9999988642 24677778889999999999999 89999999999999
Q ss_pred EEcCCCCeeecccccceecCCC-CccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCcccc
Q 003504 669 YLDMNLEPRLSDFGLAKIFGNG-LDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKE 747 (815)
Q Consensus 669 ll~~~~~~kl~Dfgla~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~ 747 (815)
+++.++.+||+|||+++..... .......||+.|+|||.+.+.. ++.++|||||||++|||++|+.||.+....
T Consensus 128 ll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwslG~il~ell~G~~Pf~~~~~~--- 202 (316)
T cd05592 128 LLDKDGHIKIADFGMCKENMNGEGKASTFCGTPDYIAPEILKGQK--YNESVDWWSFGVLLYEMLIGQSPFHGEDED--- 202 (316)
T ss_pred EECCCCCEEEccCcCCeECCCCCCccccccCCccccCHHHHcCCC--CCCcccchhHHHHHHHHHhCCCCCCCCCHH---
Confidence 9999999999999999865322 2334456999999999987765 689999999999999999999999753321
Q ss_pred ccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHH-HHH
Q 003504 748 GNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQ-QIV 805 (815)
Q Consensus 748 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~-~v~ 805 (815)
......... .+ ..+...+.++.+++.+||+.||++||++. +++
T Consensus 203 ----~~~~~i~~~-------~~----~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05592 203 ----ELFDSILND-------RP----HFPRWISKEAKDCLSKLFERDPTKRLGVDGDIR 246 (316)
T ss_pred ----HHHHHHHcC-------CC----CCCCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 111111111 01 11233456788999999999999999875 443
No 141
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=5.4e-37 Score=330.89 Aligned_cols=240 Identities=25% Similarity=0.298 Sum_probs=191.5
Q ss_pred CCCCCCeecccCCeeeEEEEcC-CCcEEEEEEeecCC---cccHHHHHHHHHHhcCCCCC-CceeeeeEEEeCCeeEEEE
Q 003504 509 NFDRGTLLAEGKFGPVYRGFLP-GGIHVAVKVLVHGS---TLTDQEAARELEYLGRIKHP-NLVPLTGYCIAGDQRIAIY 583 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~H~-niv~l~g~~~~~~~~~lv~ 583 (815)
+|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+..|++++..++|+ +|+++++++.+.+..++||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 4778899999999999999954 57889999987532 22345677899999999764 6888999998889999999
Q ss_pred EeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccC
Q 003504 584 DYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDI 663 (815)
Q Consensus 584 ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDl 663 (815)
||+++|+|.+++.. ...+++.....++.|++.||+||| +.+|+||||
T Consensus 81 E~~~~g~L~~~~~~------------------------------~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dl 127 (324)
T cd05587 81 EYVNGGDLMYHIQQ------------------------------VGKFKEPHAVFYAAEIAIGLFFLH---SKGIIYRDL 127 (324)
T ss_pred cCCCCCcHHHHHHH------------------------------cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCC
Confidence 99999999999864 224677888999999999999999 899999999
Q ss_pred CCCceEEcCCCCeeecccccceecCC-CCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCC
Q 003504 664 KASSVYLDMNLEPRLSDFGLAKIFGN-GLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDY 742 (815)
Q Consensus 664 k~~NIll~~~~~~kl~Dfgla~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~ 742 (815)
||+|||++.++.+||+|||+++.... ........||+.|+|||++.+.. ++.++|||||||++|||++|+.||....
T Consensus 128 kp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DiwslGvil~elltG~~pf~~~~ 205 (324)
T cd05587 128 KLDNVMLDAEGHIKIADFGMCKENIFGGKTTRTFCGTPDYIAPEIIAYQP--YGKSVDWWAFGVLLYEMLAGQPPFDGED 205 (324)
T ss_pred CHHHeEEcCCCCEEEeecCcceecCCCCCceeeecCCccccChhhhcCCC--CCcccchhhhHHHHHHHHhCCCCCCCCC
Confidence 99999999999999999999875432 22333456999999999998766 6889999999999999999999997533
Q ss_pred CccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCH
Q 003504 743 PEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSM 801 (815)
Q Consensus 743 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~ 801 (815)
..+. ........ ...+...+.++.+++.+|+..||++||+.
T Consensus 206 ~~~~-------~~~i~~~~-----------~~~~~~~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 206 EDEL-------FQSIMEHN-----------VSYPKSLSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred HHHH-------HHHHHcCC-----------CCCCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 2111 11111110 11123345678899999999999999976
No 142
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.7e-37 Score=326.55 Aligned_cols=250 Identities=23% Similarity=0.319 Sum_probs=211.9
Q ss_pred cCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCccc--HHHHHHHHHHhcCCCCCCceeeeeEEEeCCe-eEEEE
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGSTLT--DQEAARELEYLGRIKHPNLVPLTGYCIAGDQ-RIAIY 583 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~--~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~-~~lv~ 583 (815)
++|...+++|+|+||.++.++. .+++.+|+|.+.-..... .+...+|+.++++++|||||.+.+.+..++. .++||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 5688899999999999999885 457789999987654333 3467899999999999999999999999887 89999
Q ss_pred EeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccC
Q 003504 584 DYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDI 663 (815)
Q Consensus 584 ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDl 663 (815)
+|++||++.+.+.+.+ +..++.+...+++.|++.|+.||| +..|+||||
T Consensus 84 ~Y~eGg~l~~~i~~~k----------------------------~~~f~E~~i~~~~~Q~~~av~ylH---~~~iLHRDl 132 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQK----------------------------GVLFPEERILKWFVQILLAVNYLH---ENRVLHRDL 132 (426)
T ss_pred eecCCCCHHHHHHHHh----------------------------hccccHHHHHHHHHHHHHHHHHHH---hhhhhcccc
Confidence 9999999999997632 456777888999999999999999 899999999
Q ss_pred CCCceEEcCCCCeeecccccceecCCCC-ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCC
Q 003504 664 KASSVYLDMNLEPRLSDFGLAKIFGNGL-DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDY 742 (815)
Q Consensus 664 k~~NIll~~~~~~kl~Dfgla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~ 742 (815)
|+.||+++.+..+||+|||+|+.+.+.. ......||+.||.||++.+.. |..|+||||+||++|||++-+++|...+
T Consensus 133 K~~Nifltk~~~VkLgDfGlaK~l~~~~~~a~tvvGTp~YmcPEil~d~p--Yn~KSDiWsLGC~~yEm~~lk~aF~a~~ 210 (426)
T KOG0589|consen 133 KCANIFLTKDKKVKLGDFGLAKILNPEDSLASTVVGTPYYMCPEILSDIP--YNEKSDIWSLGCCLYEMCTLKPAFKASN 210 (426)
T ss_pred hhhhhhccccCceeecchhhhhhcCCchhhhheecCCCcccCHHHhCCCC--CCccCcchhhcchHHHHHhcccccCccc
Confidence 9999999999999999999999998765 556678999999999999888 8999999999999999999999997533
Q ss_pred CccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003504 743 PEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGL 807 (815)
Q Consensus 743 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~ 807 (815)
. ...+.+..+. ....-|..+..++..++..|++.+|+.||++.+++.+
T Consensus 211 m-------~~Li~ki~~~----------~~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 211 M-------SELILKINRG----------LYSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred h-------HHHHHHHhhc----------cCCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 2 2222222221 1122356677889999999999999999999999876
No 143
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=2.2e-37 Score=339.89 Aligned_cols=249 Identities=23% Similarity=0.270 Sum_probs=196.1
Q ss_pred cCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCC---cccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEE
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGS---TLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIY 583 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 583 (815)
++|++.+.||+|+||.||+|+. .+++.||||++.... ......+.+|++++..++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 3688899999999999999995 468899999997532 122345778999999999999999999999999999999
Q ss_pred EeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccC
Q 003504 584 DYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDI 663 (815)
Q Consensus 584 ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDl 663 (815)
||+++|+|.+++.. ...+++.....++.|++.||+||| +.+|+||||
T Consensus 81 E~~~~g~L~~~l~~------------------------------~~~l~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dl 127 (364)
T cd05599 81 EYLPGGDMMTLLMK------------------------------KDTFTEEETRFYIAETILAIDSIH---KLGYIHRDI 127 (364)
T ss_pred CCCCCcHHHHHHHH------------------------------cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccC
Confidence 99999999999964 224678888899999999999999 899999999
Q ss_pred CCCceEEcCCCCeeecccccceecCCCC---------------------------------------ccccccccccccC
Q 003504 664 KASSVYLDMNLEPRLSDFGLAKIFGNGL---------------------------------------DEEIARGSPGYIP 704 (815)
Q Consensus 664 k~~NIll~~~~~~kl~Dfgla~~~~~~~---------------------------------------~~~~~~gt~~y~a 704 (815)
||+|||++.++.+||+|||+++.+.... .....+||+.|+|
T Consensus 128 kp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a 207 (364)
T cd05599 128 KPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIA 207 (364)
T ss_pred CHHHeEECCCCCEEEeecccceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccC
Confidence 9999999999999999999987643211 0012358999999
Q ss_pred CcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHH
Q 003504 705 PEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEAL 784 (815)
Q Consensus 705 PE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 (815)
||++.... ++.++|||||||++|||++|+.||....+.+. ......... .+........+.++.
T Consensus 208 PE~~~~~~--~~~~~DiwSlG~il~el~~G~~Pf~~~~~~~~-------~~~i~~~~~-------~~~~~~~~~~s~~~~ 271 (364)
T cd05599 208 PEVFLQTG--YNKECDWWSLGVIMYEMLVGYPPFCSDNPQET-------YRKIINWKE-------TLQFPDEVPLSPEAK 271 (364)
T ss_pred HHHHcCCC--CCCeeeeecchhHHHHhhcCCCCCCCCCHHHH-------HHHHHcCCC-------ccCCCCCCCCCHHHH
Confidence 99987665 78999999999999999999999976433221 111111110 000000112345678
Q ss_pred HHHhhccccCCCCCCC---HHHHHH
Q 003504 785 KIGYLCTADLPLKRPS---MQQIVG 806 (815)
Q Consensus 785 ~l~~~Cl~~dP~~RPs---~~~v~~ 806 (815)
+++.+|+. +|.+|++ ++++++
T Consensus 272 ~li~~ll~-~p~~R~~~~~~~~ll~ 295 (364)
T cd05599 272 DLIKRLCC-EAERRLGNNGVNEIKS 295 (364)
T ss_pred HHHHHHcc-CHhhcCCCCCHHHHhc
Confidence 88889996 9999998 888865
No 144
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=6.6e-37 Score=322.88 Aligned_cols=258 Identities=24% Similarity=0.322 Sum_probs=201.9
Q ss_pred hcCCCCCCeecccCCeeeEEEEcC------CCcEEEEEEeecCCc-ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCee
Q 003504 507 TSNFDRGTLLAEGKFGPVYRGFLP------GGIHVAVKVLVHGST-LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQR 579 (815)
Q Consensus 507 ~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 579 (815)
+++|.+.+.||+|+||.||+|... .+..||+|.+..... .....+.+|+.++++++|+||+++++++.+.+..
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPR 84 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCc
Confidence 467888999999999999999964 356799998864332 2345789999999999999999999999998899
Q ss_pred EEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCee
Q 003504 580 IAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPII 659 (815)
Q Consensus 580 ~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~iv 659 (815)
++||||+++|+|.++++...... .....++|..+.+++.|++.||+||| +.+++
T Consensus 85 ~lv~e~~~g~~L~~~i~~~~~~~-----------------------~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~iv 138 (277)
T cd05036 85 FILLELMAGGDLKSFLRENRPRP-----------------------ERPSSLTMKDLLFCARDVAKGCKYLE---ENHFI 138 (277)
T ss_pred EEEEecCCCCCHHHHHHHhCCCC-----------------------CCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEe
Confidence 99999999999999997642110 11235889999999999999999999 78999
Q ss_pred eccCCCCceEEcCCC---CeeecccccceecCCCCc---cccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh
Q 003504 660 HRDIKASSVYLDMNL---EPRLSDFGLAKIFGNGLD---EEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT 733 (815)
Q Consensus 660 HrDlk~~NIll~~~~---~~kl~Dfgla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t 733 (815)
||||||+||+++.++ .+||+|||+++....... ......+..|+|||++.+.. ++.++|||||||++|||++
T Consensus 139 H~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~DiwslG~il~el~~ 216 (277)
T cd05036 139 HRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGI--FTSKTDVWSFGVLLWEIFS 216 (277)
T ss_pred ecccchheEEEeccCCCcceEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCC--cCchhHHHHHHHHHHHHHc
Confidence 999999999998654 599999999987643221 11122356799999987665 7899999999999999997
Q ss_pred -CCCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 003504 734 -GKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLK 809 (815)
Q Consensus 734 -g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~ 809 (815)
|+.||.....++ +. ....... ....+...+.++.+++.+||+.+|++||++.+|++.|.
T Consensus 217 ~g~~pf~~~~~~~----~~---~~~~~~~----------~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 217 LGYMPYPGRTNQE----VM---EFVTGGG----------RLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred CCCCCCCCCCHHH----HH---HHHHcCC----------cCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 999987533221 11 1111111 01113344567899999999999999999999999886
No 145
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=7.9e-37 Score=322.68 Aligned_cols=255 Identities=22% Similarity=0.343 Sum_probs=201.6
Q ss_pred hcCCCCCCeecccCCeeeEEEEc-CCCc----EEEEEEeecCCc-ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeE
Q 003504 507 TSNFDRGTLLAEGKFGPVYRGFL-PGGI----HVAVKVLVHGST-LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRI 580 (815)
Q Consensus 507 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~----~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 580 (815)
.++|+..+.||+|+||.||+|.+ .++. .||+|.+..... .....+.+|+.+++.++||||+++++++.. ...+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~ 84 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQ 84 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcE
Confidence 35688889999999999999984 3444 489999865332 335678899999999999999999999975 4567
Q ss_pred EEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeee
Q 003504 581 AIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIH 660 (815)
Q Consensus 581 lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivH 660 (815)
+++||+++|+|.++++.. ...+++..++.++.|++.||+||| +.+|+|
T Consensus 85 l~~~~~~~g~l~~~l~~~-----------------------------~~~~~~~~~~~~~~qi~~~L~~lH---~~~iiH 132 (279)
T cd05109 85 LVTQLMPYGCLLDYVREN-----------------------------KDRIGSQDLLNWCVQIAKGMSYLE---EVRLVH 132 (279)
T ss_pred EEEEcCCCCCHHHHHhhc-----------------------------cCCCCHHHHHHHHHHHHHHHHHHH---HCCeec
Confidence 899999999999999752 235788899999999999999999 899999
Q ss_pred ccCCCCceEEcCCCCeeecccccceecCCCCc---cccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CCC
Q 003504 661 RDIKASSVYLDMNLEPRLSDFGLAKIFGNGLD---EEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GKK 736 (815)
Q Consensus 661 rDlk~~NIll~~~~~~kl~Dfgla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~ 736 (815)
|||||+||+++.++.+||+|||+++....... .....++..|+|||...+.. ++.++|||||||++||+++ |..
T Consensus 133 ~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~--~~~~~Di~slG~~l~el~t~g~~ 210 (279)
T cd05109 133 RDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRR--FTHQSDVWSYGVTVWELMTFGAK 210 (279)
T ss_pred cccccceEEEcCCCcEEECCCCceeecccccceeecCCCccchhhCCHHHhccCC--CCchhHHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999999987653322 11223467899999987665 7889999999999999998 899
Q ss_pred CCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhhhh
Q 003504 737 PLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDIES 813 (815)
Q Consensus 737 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~~ 813 (815)
||..... ..+..++. ... ....+..++.++.+++.+||..||++||++.++++.|+++..
T Consensus 211 p~~~~~~----~~~~~~~~----~~~---------~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05109 211 PYDGIPA----REIPDLLE----KGE---------RLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMAR 270 (279)
T ss_pred CCCCCCH----HHHHHHHH----CCC---------cCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 9864321 11222211 110 001123345678899999999999999999999999988754
No 146
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.5e-36 Score=333.99 Aligned_cols=257 Identities=21% Similarity=0.193 Sum_probs=194.8
Q ss_pred cCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeC
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYM 586 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 586 (815)
.+|++.+.||+|+||.||+|.. .+++.||+|... ...+.+|++++++++||||+++++++......++|+||+
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~ 165 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRY 165 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecC
Confidence 5799999999999999999994 568899999653 235789999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCC
Q 003504 587 ENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKAS 666 (815)
Q Consensus 587 ~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~ 666 (815)
. ++|..++.. ...+++...+.++.|++.||+||| +.+||||||||+
T Consensus 166 ~-~~L~~~l~~------------------------------~~~l~~~~~~~i~~qi~~aL~ylH---~~~IvHrDiKP~ 211 (391)
T PHA03212 166 K-TDLYCYLAA------------------------------KRNIAICDILAIERSVLRAIQYLH---ENRIIHRDIKAE 211 (391)
T ss_pred C-CCHHHHHHh------------------------------cCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChH
Confidence 6 688888854 234678889999999999999999 789999999999
Q ss_pred ceEEcCCCCeeecccccceecCCC--CccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCc
Q 003504 667 SVYLDMNLEPRLSDFGLAKIFGNG--LDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPE 744 (815)
Q Consensus 667 NIll~~~~~~kl~Dfgla~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~ 744 (815)
|||++.++.+||+|||+|+..... .......||+.|+|||++.+.. ++.++|||||||++|||++|+.||......
T Consensus 212 NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DiwSlGvil~elltg~~p~~~~~~~ 289 (391)
T PHA03212 212 NIFINHPGDVCLGDFGAACFPVDINANKYYGWAGTIATNAPELLARDP--YGPAVDIWSAGIVLFEMATCHDSLFEKDGL 289 (391)
T ss_pred hEEEcCCCCEEEEeCCcccccccccccccccccCccCCCChhhhcCCC--CCcHHHHHHHHHHHHHHHHCCCCcCCcccc
Confidence 999999999999999999754321 1223456999999999987765 789999999999999999999887643211
Q ss_pred cccccHHHHHHHHHhcCC----------------------CCccccccccCC--CCHHHHHHHHHHHhhccccCCCCCCC
Q 003504 745 EKEGNLVSWVRGLVRNNK----------------------GSRAIDPKIRDT--GPEKQMEEALKIGYLCTADLPLKRPS 800 (815)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~--~~~~~~~~~~~l~~~Cl~~dP~~RPs 800 (815)
.........+........ ......+..+.. .....+.++.+++.+|++.||++|||
T Consensus 290 ~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpt 369 (391)
T PHA03212 290 DGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPS 369 (391)
T ss_pred cccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCC
Confidence 111000000000000000 000000000000 01134567899999999999999999
Q ss_pred HHHHHH
Q 003504 801 MQQIVG 806 (815)
Q Consensus 801 ~~~v~~ 806 (815)
++|+++
T Consensus 370 a~elL~ 375 (391)
T PHA03212 370 AEALLD 375 (391)
T ss_pred HHHHhc
Confidence 999985
No 147
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=1.2e-36 Score=323.88 Aligned_cols=270 Identities=23% Similarity=0.322 Sum_probs=201.4
Q ss_pred cCCCCCCeecccCCeeeEEEEcCC---------------CcEEEEEEeecCCc-ccHHHHHHHHHHhcCCCCCCceeeee
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFLPG---------------GIHVAVKVLVHGST-LTDQEAARELEYLGRIKHPNLVPLTG 571 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~~~---------------~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g 571 (815)
++|.+.+.||+|+||.||+|+..+ ...||||.++.... .....+.+|++++.+++|||++++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 578889999999999999987532 23589999875422 23457899999999999999999999
Q ss_pred EEEeCCeeEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHh
Q 003504 572 YCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLH 651 (815)
Q Consensus 572 ~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH 651 (815)
++......++||||+++++|.+++........ .........++|..+++++.|++.||+|||
T Consensus 85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~------------------~~~~~~~~~~~~~~~~~i~~~i~~al~~lH 146 (295)
T cd05097 85 VCVSDDPLCMITEYMENGDLNQFLSQREIEST------------------FTHANNIPSVSIANLLYMAVQIASGMKYLA 146 (295)
T ss_pred EEcCCCccEEEEecCCCCcHHHHHHhcccccc------------------ccccccCCcccHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999965310000 000011234688999999999999999999
Q ss_pred cCCCCCeeeccCCCCceEEcCCCCeeecccccceecCCCCc---cccccccccccCCcccCCCCCCCCCcCcchhHHHHH
Q 003504 652 HGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLD---EEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVL 728 (815)
Q Consensus 652 ~~~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl 728 (815)
+.+++||||||+||++++++.+||+|||++........ .....++..|+|||...... ++.++|||||||++
T Consensus 147 ---~~~i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~DvwSlG~~l 221 (295)
T cd05097 147 ---SLNFVHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGK--FTTASDVWAFGVTL 221 (295)
T ss_pred ---hcCeeccccChhhEEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCC--cCchhhHHHHHHHH
Confidence 88999999999999999999999999999986543221 11223567899999887655 78999999999999
Q ss_pred HHHHh--CCCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 729 LELIT--GKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 729 ~el~t--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
|||++ |..||......+ ............. ... ....+...+..+.+++.+||+.+|++||+|.+|++
T Consensus 222 ~el~~~~~~~p~~~~~~~~----~~~~~~~~~~~~~-~~~-----~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~ 291 (295)
T cd05097 222 WEMFTLCKEQPYSLLSDEQ----VIENTGEFFRNQG-RQI-----YLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH 291 (295)
T ss_pred HHHHHcCCCCCCcccChHH----HHHHHHHhhhhcc-ccc-----cCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 99998 566776432211 1211111111110 000 01112234568999999999999999999999999
Q ss_pred HHHh
Q 003504 807 LLKD 810 (815)
Q Consensus 807 ~L~~ 810 (815)
.|++
T Consensus 292 ~l~~ 295 (295)
T cd05097 292 FLRE 295 (295)
T ss_pred HHhC
Confidence 8863
No 148
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.4e-36 Score=324.92 Aligned_cols=271 Identities=27% Similarity=0.358 Sum_probs=207.5
Q ss_pred hcCCCCCCeecccCCeeeEEEEc--------CCCcEEEEEEeecCC-cccHHHHHHHHHHhcCC-CCCCceeeeeEEEeC
Q 003504 507 TSNFDRGTLLAEGKFGPVYRGFL--------PGGIHVAVKVLVHGS-TLTDQEAARELEYLGRI-KHPNLVPLTGYCIAG 576 (815)
Q Consensus 507 ~~~~~~~~~ig~G~~g~Vy~~~~--------~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~ 576 (815)
.++|.+.+.||+|+||.||+|+. .++..||+|.+.... ......+.+|+.++..+ +||||+++++++...
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 93 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 93 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence 45688889999999999999973 134579999886532 23346788999999999 899999999999999
Q ss_pred CeeEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCC
Q 003504 577 DQRIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSP 656 (815)
Q Consensus 577 ~~~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~ 656 (815)
...++||||+++|+|.+++........ .+..+ +. ......++|..+..++.|++.||+||| +.
T Consensus 94 ~~~~lv~e~~~~~~L~~~l~~~~~~~~---~~~~~---------~~--~~~~~~~~~~~~~~~~~qi~~al~~LH---~~ 156 (304)
T cd05101 94 GPLYVIVEYASKGNLREYLRARRPPGM---EYSYD---------IA--RVPDEQMTFKDLVSCTYQVARGMEYLA---SQ 156 (304)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCccc---ccccc---------cc--cCCcccccHHHHHHHHHHHHHHHHHHH---HC
Confidence 999999999999999999976421100 00000 00 012346889999999999999999999 88
Q ss_pred CeeeccCCCCceEEcCCCCeeecccccceecCCCCc---cccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh
Q 003504 657 PIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLD---EEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT 733 (815)
Q Consensus 657 ~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t 733 (815)
+++||||||+||+++.++.+||+|||+++....... .....++..|+|||.+.+.. ++.++||||||+++||+++
T Consensus 157 givH~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~Di~slG~~l~el~~ 234 (304)
T cd05101 157 KCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRV--YTHQSDVWSFGVLMWEIFT 234 (304)
T ss_pred CeeecccccceEEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCC--CCchhhHHHHHHHHHHHHc
Confidence 999999999999999999999999999987653221 12233567899999887655 7889999999999999998
Q ss_pred -CCCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhhh
Q 003504 734 -GKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDIE 812 (815)
Q Consensus 734 -g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~ 812 (815)
|..||.... ...+.... .... ....+..++.++.+++.+||+.+|++||+|.++++.|+++.
T Consensus 235 ~g~~p~~~~~-------~~~~~~~~-~~~~---------~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~ 297 (304)
T cd05101 235 LGGSPYPGIP-------VEELFKLL-KEGH---------RMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRIL 297 (304)
T ss_pred CCCCCcccCC-------HHHHHHHH-HcCC---------cCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHH
Confidence 788886422 12222222 1111 11113345678899999999999999999999999999885
Q ss_pred h
Q 003504 813 S 813 (815)
Q Consensus 813 ~ 813 (815)
.
T Consensus 298 ~ 298 (304)
T cd05101 298 T 298 (304)
T ss_pred H
Confidence 4
No 149
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=1.7e-37 Score=333.99 Aligned_cols=237 Identities=24% Similarity=0.292 Sum_probs=191.7
Q ss_pred CeecccCCeeeEEEEc----CCCcEEEEEEeecCCc--ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeCC
Q 003504 514 TLLAEGKFGPVYRGFL----PGGIHVAVKVLVHGST--LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYME 587 (815)
Q Consensus 514 ~~ig~G~~g~Vy~~~~----~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 587 (815)
+.||+|+||.||++.. .+|+.||+|++..... .....+.+|++++++++||||+++++++.+.+..++||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5799999999999874 4678999999975322 223456789999999999999999999999999999999999
Q ss_pred CCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCc
Q 003504 588 NGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASS 667 (815)
Q Consensus 588 ~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~N 667 (815)
+|+|.+++.. ...+++.....++.|++.||+||| +.+|+||||||+|
T Consensus 82 ~~~L~~~l~~------------------------------~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~N 128 (318)
T cd05582 82 GGDLFTRLSK------------------------------EVMFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPEN 128 (318)
T ss_pred CCcHHHHHHH------------------------------cCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHH
Confidence 9999999864 235788889999999999999999 8999999999999
Q ss_pred eEEcCCCCeeecccccceecCCC-CccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCccc
Q 003504 668 VYLDMNLEPRLSDFGLAKIFGNG-LDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEK 746 (815)
Q Consensus 668 Ill~~~~~~kl~Dfgla~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~ 746 (815)
|+++.++.+||+|||+++..... .......|++.|+|||.+.... ++.++|||||||++|||++|+.||......
T Consensus 129 il~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~--~~~~~DiwslG~il~el~tg~~p~~~~~~~-- 204 (318)
T cd05582 129 ILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRG--HTQSADWWSFGVLMFEMLTGSLPFQGKDRK-- 204 (318)
T ss_pred eEECCCCcEEEeeccCCcccCCCCCceecccCChhhcCHHHHcCCC--CCCccceeccceEeeeeccCCCCCCCCCHH--
Confidence 99999999999999999865433 2233456899999999987655 688999999999999999999999753221
Q ss_pred cccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHH
Q 003504 747 EGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQ 803 (815)
Q Consensus 747 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~ 803 (815)
.......... ...+...+..+.+++.+||+.||++||++.+
T Consensus 205 -----~~~~~i~~~~-----------~~~p~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 205 -----ETMTMILKAK-----------LGMPQFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred -----HHHHHHHcCC-----------CCCCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 1111111111 0113334567889999999999999999554
No 150
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=9.4e-37 Score=320.84 Aligned_cols=240 Identities=23% Similarity=0.342 Sum_probs=187.2
Q ss_pred eecccCCeeeEEEEcCC-------------------------CcEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCceee
Q 003504 515 LLAEGKFGPVYRGFLPG-------------------------GIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPL 569 (815)
Q Consensus 515 ~ig~G~~g~Vy~~~~~~-------------------------~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l 569 (815)
.||+|+||.||+|.+.. ...||+|++..........+.+|+.++++++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 69999999999997421 24589998865433344578889999999999999999
Q ss_pred eeEEEeCCeeEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHH
Q 003504 570 TGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAF 649 (815)
Q Consensus 570 ~g~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~y 649 (815)
+|+|......++||||+++|+|..++... ...+++..+..++.|+++||+|
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~-----------------------------~~~~~~~~~~~i~~qi~~~l~~ 132 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRKE-----------------------------KGRVPVAWKITVAQQLASALSY 132 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHhc-----------------------------CCCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998642 2356788899999999999999
Q ss_pred HhcCCCCCeeeccCCCCceEEcCCC-------CeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcch
Q 003504 650 LHHGCSPPIIHRDIKASSVYLDMNL-------EPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVY 722 (815)
Q Consensus 650 LH~~~~~~ivHrDlk~~NIll~~~~-------~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~ 722 (815)
|| +.+|+||||||+||+++.++ .+|++|||.+...... ....++..|+|||.+.... .++.++|||
T Consensus 133 lH---~~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~---~~~~~~~~~~aPe~~~~~~-~~~~~~Dv~ 205 (274)
T cd05076 133 LE---DKNLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALSR---EERVERIPWIAPECVPGGN-SLSTAADKW 205 (274)
T ss_pred HH---cCCccCCCCCcccEEEeccCcccCccceeeecCCccccccccc---cccccCCcccCchhhcCCC-CCCcHHHHH
Confidence 99 88999999999999998654 3799999988654322 2234778899999886542 268899999
Q ss_pred hHHHHHHHHH-hCCCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCH
Q 003504 723 CYGVVLLELI-TGKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSM 801 (815)
Q Consensus 723 S~Gvvl~el~-tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~ 801 (815)
||||++||++ +|+.||....+.+. ..+ ..... .. +......+.+++.+||+.+|++||+|
T Consensus 206 slG~~l~el~~~g~~p~~~~~~~~~----~~~----~~~~~-------~~----~~~~~~~~~~li~~cl~~~p~~Rps~ 266 (274)
T cd05076 206 SFGTTLLEICFDGEVPLKERTPSEK----ERF----YEKKH-------RL----PEPSCKELATLISQCLTYEPTQRPSF 266 (274)
T ss_pred HHHHHHHHHHhCCCCCccccChHHH----HHH----HHhcc-------CC----CCCCChHHHHHHHHHcccChhhCcCH
Confidence 9999999995 69999875432211 111 11100 00 11123468899999999999999999
Q ss_pred HHHHHHHH
Q 003504 802 QQIVGLLK 809 (815)
Q Consensus 802 ~~v~~~L~ 809 (815)
.+|++.|.
T Consensus 267 ~~il~~L~ 274 (274)
T cd05076 267 RTILRDLT 274 (274)
T ss_pred HHHHHhhC
Confidence 99998873
No 151
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=1.3e-36 Score=321.00 Aligned_cols=246 Identities=23% Similarity=0.254 Sum_probs=193.8
Q ss_pred ecccCCeeeEEEEc-CCCcEEEEEEeecCCcc---cHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeCCCCCh
Q 003504 516 LAEGKFGPVYRGFL-PGGIHVAVKVLVHGSTL---TDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNL 591 (815)
Q Consensus 516 ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~---~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL 591 (815)
||+|+||+||+|.. .+++.||||.+...... ..+.+..|++++++++||||+++.+++......++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 69999999999985 46889999998653222 224567899999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCceEEc
Q 003504 592 QNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLD 671 (815)
Q Consensus 592 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NIll~ 671 (815)
..++.... .....+++..+..++.|++.||+||| +.+|+||||||+||+++
T Consensus 81 ~~~~~~~~--------------------------~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~ 131 (280)
T cd05608 81 RYHIYNVD--------------------------EENPGFPEPRACFYTAQIISGLEHLH---QRRIIYRDLKPENVLLD 131 (280)
T ss_pred HHHHHhcc--------------------------ccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEC
Confidence 98885421 12345788999999999999999999 88999999999999999
Q ss_pred CCCCeeecccccceecCCCC-ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCccccccH
Q 003504 672 MNLEPRLSDFGLAKIFGNGL-DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNL 750 (815)
Q Consensus 672 ~~~~~kl~Dfgla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~ 750 (815)
.++.+||+|||++.....+. ......|++.|+|||.+.+.. ++.++|||||||++|||++|+.||.........
T Consensus 132 ~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~--~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~--- 206 (280)
T cd05608 132 NDGNVRISDLGLAVELKDGQSKTKGYAGTPGFMAPELLQGEE--YDFSVDYFALGVTLYEMIAARGPFRARGEKVEN--- 206 (280)
T ss_pred CCCCEEEeeCccceecCCCCccccccCCCcCccCHHHhcCCC--CCccccHHHHHHHHHHHHhCCCCCCCCCcchhH---
Confidence 99999999999998765432 223446899999999998765 688999999999999999999999753221111
Q ss_pred HHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCC-----CHHHHHH
Q 003504 751 VSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRP-----SMQQIVG 806 (815)
Q Consensus 751 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----s~~~v~~ 806 (815)
........ ... ...+...+.++.+++.+||+.||++|| +++++++
T Consensus 207 ~~~~~~~~---------~~~--~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~ 256 (280)
T cd05608 207 KELKQRIL---------NDS--VTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRT 256 (280)
T ss_pred HHHHHhhc---------ccC--CCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence 11111111 010 112334567789999999999999999 6677764
No 152
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=8.2e-37 Score=329.34 Aligned_cols=240 Identities=25% Similarity=0.313 Sum_probs=192.1
Q ss_pred CCCCCCeecccCCeeeEEEEcC-CCcEEEEEEeecCCc---ccHHHHHHHHHHhcCC-CCCCceeeeeEEEeCCeeEEEE
Q 003504 509 NFDRGTLLAEGKFGPVYRGFLP-GGIHVAVKVLVHGST---LTDQEAARELEYLGRI-KHPNLVPLTGYCIAGDQRIAIY 583 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ 583 (815)
+|.+.+.||+|+||.||+|+.. ++..||||++..... .....+..|..++..+ +||+|+++++++.+.+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 4778899999999999999854 578999999875422 2233466788888777 5899999999999999999999
Q ss_pred EeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccC
Q 003504 584 DYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDI 663 (815)
Q Consensus 584 ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDl 663 (815)
||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||
T Consensus 81 E~~~~g~L~~~~~~~------------------------------~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDl 127 (323)
T cd05616 81 EYVNGGDLMYQIQQV------------------------------GRFKEPHAVFYAAEIAIGLFFLH---SKGIIYRDL 127 (323)
T ss_pred cCCCCCCHHHHHHHc------------------------------CCCCHHHHHHHHHHHHHHHHHHH---HCCEEecCC
Confidence 999999999988642 24677888999999999999999 889999999
Q ss_pred CCCceEEcCCCCeeecccccceecCC-CCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCC
Q 003504 664 KASSVYLDMNLEPRLSDFGLAKIFGN-GLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDY 742 (815)
Q Consensus 664 k~~NIll~~~~~~kl~Dfgla~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~ 742 (815)
||+|||++.++.+||+|||+++.... +.......||+.|+|||++.... ++.++|||||||++|||++|+.||....
T Consensus 128 kp~Nill~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DiwSlGvil~elltg~~Pf~~~~ 205 (323)
T cd05616 128 KLDNVMLDSEGHIKIADFGMCKENMWDGVTTKTFCGTPDYIAPEIIAYQP--YGKSVDWWAFGVLLYEMLAGQAPFEGED 205 (323)
T ss_pred CHHHeEECCCCcEEEccCCCceecCCCCCccccCCCChhhcCHHHhcCCC--CCCccchhchhHHHHHHHhCCCCCCCCC
Confidence 99999999999999999999986432 22334456999999999998765 7899999999999999999999997533
Q ss_pred CccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCH
Q 003504 743 PEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSM 801 (815)
Q Consensus 743 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~ 801 (815)
..+ ......... ...+...+.++.+++.+|++.||++|++.
T Consensus 206 ~~~-------~~~~i~~~~-----------~~~p~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 206 EDE-------LFQSIMEHN-----------VAYPKSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred HHH-------HHHHHHhCC-----------CCCCCcCCHHHHHHHHHHcccCHHhcCCC
Confidence 211 111111111 11133455678899999999999999974
No 153
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=1.2e-36 Score=319.54 Aligned_cols=263 Identities=25% Similarity=0.365 Sum_probs=198.0
Q ss_pred CeecccCCeeeEEEEcCC-Cc--EEEEEEeecCC-cccHHHHHHHHHHhcCC-CCCCceeeeeEEEeCCeeEEEEEeCCC
Q 003504 514 TLLAEGKFGPVYRGFLPG-GI--HVAVKVLVHGS-TLTDQEAARELEYLGRI-KHPNLVPLTGYCIAGDQRIAIYDYMEN 588 (815)
Q Consensus 514 ~~ig~G~~g~Vy~~~~~~-~~--~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ey~~~ 588 (815)
+.||+|+||.||+|+..+ +. .+|+|.+.... ....+.+.+|++++.++ +||||+++++++......++||||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 468999999999999643 43 47888886432 23346788999999999 799999999999998899999999999
Q ss_pred CChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCce
Q 003504 589 GNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSV 668 (815)
Q Consensus 589 gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NI 668 (815)
|+|.++++....... .. ...........+++..+..++.|++.||+||| +.+++||||||+||
T Consensus 81 ~~L~~~i~~~~~~~~------------~~--~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH---~~~i~H~dikp~ni 143 (270)
T cd05047 81 GNLLDFLRKSRVLET------------DP--AFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNI 143 (270)
T ss_pred CcHHHHHHhcccccc------------cc--ccccccCCcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccccceE
Confidence 999999975321100 00 00000112345789999999999999999999 78999999999999
Q ss_pred EEcCCCCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCCcccc
Q 003504 669 YLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKE 747 (815)
Q Consensus 669 ll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~~~~ 747 (815)
++++++.+||+|||++..............+..|+|||++.... ++.++|||||||++|||++ |..||......
T Consensus 144 li~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~y~apE~~~~~~--~~~~~Di~slG~il~el~~~g~~pf~~~~~~--- 218 (270)
T cd05047 144 LVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSV--YTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA--- 218 (270)
T ss_pred EEcCCCeEEECCCCCccccchhhhccCCCCccccCChHHHccCC--CCchhhHHHHHHHHHHHHcCCCCCccccCHH---
Confidence 99999999999999986433221122223456799999886655 6889999999999999997 99998643211
Q ss_pred ccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhhh
Q 003504 748 GNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDIE 812 (815)
Q Consensus 748 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~ 812 (815)
......... .....+...+.++.+++.+||+.+|.+||++.++++.|+++-
T Consensus 219 ----~~~~~~~~~----------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 219 ----ELYEKLPQG----------YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred ----HHHHHHhCC----------CCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 111111111 111122334567899999999999999999999999998874
No 154
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=8.6e-37 Score=326.98 Aligned_cols=271 Identities=25% Similarity=0.304 Sum_probs=206.5
Q ss_pred cCCCCCCeecccCCeeeEEEEcC--------CCcEEEEEEeecCC-cccHHHHHHHHHHhcCC-CCCCceeeeeEEEeCC
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFLP--------GGIHVAVKVLVHGS-TLTDQEAARELEYLGRI-KHPNLVPLTGYCIAGD 577 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~~--------~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~ 577 (815)
++|.+.+.||+|+||.||+|... ++..||+|.+.... ......+.+|++++.++ +||||+++++++...+
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 97 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 97 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence 56888999999999999999742 23579999987532 23345688899999999 7999999999999999
Q ss_pred eeEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCC
Q 003504 578 QRIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPP 657 (815)
Q Consensus 578 ~~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ 657 (815)
..++||||+++|+|.+++....... ...+... .......++|..+++++.|++.||+||| +.+
T Consensus 98 ~~~lv~e~~~~~~L~~~i~~~~~~~--~~~~~~~------------~~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~g 160 (307)
T cd05098 98 PLYVIVEYASKGNLREYLRARRPPG--MEYCYNP------------TQVPEEQLSFKDLVSCAYQVARGMEYLA---SKK 160 (307)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcc--ccccccc------------ccCccccCCHHHHHHHHHHHHHHHHHHH---HCC
Confidence 9999999999999999997642110 0000000 0012345889999999999999999999 889
Q ss_pred eeeccCCCCceEEcCCCCeeecccccceecCCCCc---cccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-
Q 003504 658 IIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLD---EEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT- 733 (815)
Q Consensus 658 ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t- 733 (815)
++||||||+||+++.++.+||+|||.++....... .....++..|+|||.+.+.. ++.++|||||||++|||++
T Consensus 161 i~H~dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~DvwslG~~l~el~~~ 238 (307)
T cd05098 161 CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI--YTHQSDVWSFGVLLWEIFTL 238 (307)
T ss_pred cccccccHHheEEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCC--CCcHHHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999986543221 11122456899999887655 6889999999999999998
Q ss_pred CCCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhhhh
Q 003504 734 GKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDIES 813 (815)
Q Consensus 734 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~~ 813 (815)
|+.||..... ...... ..... ....+...+.++.+++.+||..+|++||+|.+|++.|+++.+
T Consensus 239 g~~p~~~~~~-------~~~~~~-~~~~~---------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~ 301 (307)
T cd05098 239 GGSPYPGVPV-------EELFKL-LKEGH---------RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILA 301 (307)
T ss_pred CCCCCCcCCH-------HHHHHH-HHcCC---------CCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHH
Confidence 8888864221 111111 11111 112233456788999999999999999999999999999865
Q ss_pred c
Q 003504 814 T 814 (815)
Q Consensus 814 ~ 814 (815)
.
T Consensus 302 ~ 302 (307)
T cd05098 302 L 302 (307)
T ss_pred H
Confidence 3
No 155
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=1.5e-36 Score=316.29 Aligned_cols=249 Identities=24% Similarity=0.336 Sum_probs=200.1
Q ss_pred cCCCCCCeecccCCeeeEEEEcCCCcEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCceeeeeEEEe-CCeeEEEEEeC
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIA-GDQRIAIYDYM 586 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~-~~~~~lv~ey~ 586 (815)
.+|++.+.||+|+||.||+|... |..||+|.++.. ...+.+.+|+.++++++|+|++++++++.. .+..++|+||+
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~ 82 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 82 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCC--chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECC
Confidence 46888899999999999999875 778999988643 235678999999999999999999998654 45789999999
Q ss_pred CCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCC
Q 003504 587 ENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKAS 666 (815)
Q Consensus 587 ~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~ 666 (815)
++|+|.++++.. ....+++..+.+++.|++.||+||| +.+++||||||+
T Consensus 83 ~~~~L~~~~~~~----------------------------~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~ 131 (256)
T cd05082 83 AKGSLVDYLRSR----------------------------GRSVLGGDCLLKFSLDVCEAMEYLE---ANNFVHRDLAAR 131 (256)
T ss_pred CCCcHHHHHHhc----------------------------CCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeccccchh
Confidence 999999999752 1234788999999999999999999 889999999999
Q ss_pred ceEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCCcc
Q 003504 667 SVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GKKPLGDDYPEE 745 (815)
Q Consensus 667 NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~~ 745 (815)
||++++++.+||+|||+++...... ....++..|+|||++.... ++.++|||||||++|||++ |+.||.....
T Consensus 132 nil~~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~y~aPE~~~~~~--~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~-- 205 (256)
T cd05082 132 NVLVSEDNVAKVSDFGLTKEASSTQ--DTGKLPVKWTAPEALREKK--FSTKSDVWSFGILLWEIYSFGRVPYPRIPL-- 205 (256)
T ss_pred eEEEcCCCcEEecCCccceeccccC--CCCccceeecCHHHHccCC--CCchhhhHHHHHHHHHHHhCCCCCCCCCCH--
Confidence 9999999999999999998654322 2233567899999987655 7889999999999999998 9999864221
Q ss_pred ccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhh
Q 003504 746 KEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDI 811 (815)
Q Consensus 746 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 811 (815)
....... ... .....+..++..+.+++.+||+.+|++||++.++++.|+++
T Consensus 206 -----~~~~~~~-~~~---------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 206 -----KDVVPRV-EKG---------YKMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred -----HHHHHHH-hcC---------CCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 1111111 111 01112334567889999999999999999999999999864
No 156
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=4.5e-37 Score=336.92 Aligned_cols=253 Identities=21% Similarity=0.264 Sum_probs=199.4
Q ss_pred HhcCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCC---cccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEE
Q 003504 506 ATSNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGS---TLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIA 581 (815)
Q Consensus 506 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 581 (815)
..++|++.+.||+|+||.||+|+. .++..||+|++.... ......+.+|+.+++.++||||+++++++.+....++
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l 120 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM 120 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence 356788999999999999999995 468899999986421 1233457789999999999999999999999999999
Q ss_pred EEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeec
Q 003504 582 IYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHR 661 (815)
Q Consensus 582 v~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHr 661 (815)
||||+++|+|.++++.. .++......++.|++.||+||| +.+|+||
T Consensus 121 v~Ey~~gg~L~~~l~~~-------------------------------~l~~~~~~~~~~qi~~aL~~LH---~~~ivHr 166 (370)
T cd05596 121 VMEYMPGGDLVNLMSNY-------------------------------DIPEKWARFYTAEVVLALDAIH---SMGFIHR 166 (370)
T ss_pred EEcCCCCCcHHHHHHhc-------------------------------CCCHHHHHHHHHHHHHHHHHHH---HCCeecc
Confidence 99999999999998642 2455667788999999999999 8999999
Q ss_pred cCCCCceEEcCCCCeeecccccceecCCCC--ccccccccccccCCcccCCCC--CCCCCcCcchhHHHHHHHHHhCCCC
Q 003504 662 DIKASSVYLDMNLEPRLSDFGLAKIFGNGL--DEEIARGSPGYIPPEFAQPDS--DFPTPKSDVYCYGVVLLELITGKKP 737 (815)
Q Consensus 662 Dlk~~NIll~~~~~~kl~Dfgla~~~~~~~--~~~~~~gt~~y~aPE~~~~~~--~~~~~~~Dv~S~Gvvl~el~tg~~p 737 (815)
||||+|||++.++.+||+|||+++...... ......||+.|+|||++.... ..++.++|||||||++|||++|+.|
T Consensus 167 DLkp~NILl~~~~~~kL~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~P 246 (370)
T cd05596 167 DVKPDNMLLDKSGHLKLADFGTCMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 246 (370)
T ss_pred CCCHHHEEEcCCCCEEEEeccceeeccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCC
Confidence 999999999999999999999998765332 223456999999999986542 2368899999999999999999999
Q ss_pred CCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCC--CCCHHHHHH
Q 003504 738 LGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLK--RPSMQQIVG 806 (815)
Q Consensus 738 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~--RPs~~~v~~ 806 (815)
|...... ........... .+........+.++.+++.+|+..+|++ ||+++++++
T Consensus 247 f~~~~~~-------~~~~~i~~~~~-------~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~ 303 (370)
T cd05596 247 FYADSLV-------GTYSKIMDHKN-------SLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKS 303 (370)
T ss_pred cCCCCHH-------HHHHHHHcCCC-------cCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhc
Confidence 9753321 11122221110 0110111134567889999999999988 999999965
No 157
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=7.3e-37 Score=328.83 Aligned_cols=240 Identities=27% Similarity=0.329 Sum_probs=192.7
Q ss_pred CeecccCCeeeEEEEcC-CCcEEEEEEeecCC---cccHHHHHHHHHHhcCC-CCCCceeeeeEEEeCCeeEEEEEeCCC
Q 003504 514 TLLAEGKFGPVYRGFLP-GGIHVAVKVLVHGS---TLTDQEAARELEYLGRI-KHPNLVPLTGYCIAGDQRIAIYDYMEN 588 (815)
Q Consensus 514 ~~ig~G~~g~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ey~~~ 588 (815)
+.||+|+||.||+|... ++..||||+++... ......+.+|.++++.+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999864 57899999997532 22334567888888887 699999999999999999999999999
Q ss_pred CChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCce
Q 003504 589 GNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSV 668 (815)
Q Consensus 589 gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NI 668 (815)
|+|..++.. ...+++.....++.|++.||+||| +.+|+||||||+||
T Consensus 81 ~~L~~~~~~------------------------------~~~l~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Ni 127 (318)
T cd05570 81 GDLMFHIQR------------------------------SGRFDEPRARFYAAEIVLGLQFLH---ERGIIYRDLKLDNV 127 (318)
T ss_pred CCHHHHHHH------------------------------cCCCCHHHHHHHHHHHHHHHHHHH---hCCeEccCCCHHHe
Confidence 999988864 235788899999999999999999 89999999999999
Q ss_pred EEcCCCCeeecccccceecCC-CCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCcccc
Q 003504 669 YLDMNLEPRLSDFGLAKIFGN-GLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKE 747 (815)
Q Consensus 669 ll~~~~~~kl~Dfgla~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~ 747 (815)
+++.++.+||+|||+++.... ........|++.|+|||++.+.. ++.++|||||||++|||++|+.||......
T Consensus 128 ll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~--~~~~~DiwslGvil~~l~~G~~pf~~~~~~--- 202 (318)
T cd05570 128 LLDSEGHIKIADFGMCKEGILGGVTTSTFCGTPDYIAPEILSYQP--YGPAVDWWALGVLLYEMLAGQSPFEGDDED--- 202 (318)
T ss_pred EECCCCcEEecccCCCeecCcCCCcccceecCccccCHHHhcCCC--CCcchhhhhHHHHHHHHhhCCCCCCCCCHH---
Confidence 999999999999999875322 22233456899999999997766 788999999999999999999999753211
Q ss_pred ccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCH-----HHHHH
Q 003504 748 GNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSM-----QQIVG 806 (815)
Q Consensus 748 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~-----~~v~~ 806 (815)
.......... . ..+...+.++.+++.+||+.||++||++ .++++
T Consensus 203 ----~~~~~i~~~~-------~----~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 203 ----ELFQSILEDE-------V----RYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred ----HHHHHHHcCC-------C----CCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence 1111111111 0 1123345678999999999999999999 77754
No 158
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=1.1e-36 Score=326.98 Aligned_cols=239 Identities=25% Similarity=0.330 Sum_probs=189.6
Q ss_pred CeecccCCeeeEEEEcC-CCcEEEEEEeecCC---cccHHHHHHHHHHhcC-CCCCCceeeeeEEEeCCeeEEEEEeCCC
Q 003504 514 TLLAEGKFGPVYRGFLP-GGIHVAVKVLVHGS---TLTDQEAARELEYLGR-IKHPNLVPLTGYCIAGDQRIAIYDYMEN 588 (815)
Q Consensus 514 ~~ig~G~~g~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~-l~H~niv~l~g~~~~~~~~~lv~ey~~~ 588 (815)
+.||+|+||.||+|+.. ++..||||+++... ......+..|..++.. ++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999964 57899999987532 2233456677888776 4899999999999999999999999999
Q ss_pred CChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCce
Q 003504 589 GNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSV 668 (815)
Q Consensus 589 gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NI 668 (815)
|+|.+++.. ...+++.....++.|++.||+||| +.+|+||||||+||
T Consensus 81 g~L~~~l~~------------------------------~~~~~~~~~~~~~~qi~~al~~LH---~~~ivHrdikp~Ni 127 (316)
T cd05619 81 GDLMFHIQS------------------------------CHKFDLPRATFYAAEIICGLQFLH---SKGIVYRDLKLDNI 127 (316)
T ss_pred CcHHHHHHH------------------------------cCCCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHE
Confidence 999999864 224678888999999999999999 89999999999999
Q ss_pred EEcCCCCeeecccccceecCCC-CccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCcccc
Q 003504 669 YLDMNLEPRLSDFGLAKIFGNG-LDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKE 747 (815)
Q Consensus 669 ll~~~~~~kl~Dfgla~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~ 747 (815)
|++.++.+||+|||+++..... .......||+.|+|||++.+.. ++.++|||||||++|||++|+.||......+
T Consensus 128 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwslG~il~el~~G~~pf~~~~~~~-- 203 (316)
T cd05619 128 LLDTDGHIKIADFGMCKENMLGDAKTCTFCGTPDYIAPEILLGQK--YNTSVDWWSFGVLLYEMLIGQSPFHGHDEEE-- 203 (316)
T ss_pred EECCCCCEEEccCCcceECCCCCCceeeecCCccccCHHHHcCCC--CCchhhhhhHHHHHHHHHhCCCCCCCCCHHH--
Confidence 9999999999999999754322 2233456899999999987665 7899999999999999999999997533211
Q ss_pred ccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHH-HHH
Q 003504 748 GNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQ-QIV 805 (815)
Q Consensus 748 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~-~v~ 805 (815)
+. +.. ... .+. .+.....++.+++.+||+.||++||++. ++.
T Consensus 204 --~~---~~i-~~~------~~~----~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05619 204 --LF---QSI-RMD------NPC----YPRWLTREAKDILVKLFVREPERRLGVKGDIR 246 (316)
T ss_pred --HH---HHH-HhC------CCC----CCccCCHHHHHHHHHHhccCHhhcCCChHHHH
Confidence 11 111 111 011 1223456788999999999999999997 554
No 159
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.5e-38 Score=331.70 Aligned_cols=247 Identities=21% Similarity=0.311 Sum_probs=200.8
Q ss_pred eecccCCeeeEEEE-cCCCcEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeCCCCChhh
Q 003504 515 LLAEGKFGPVYRGF-LPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQN 593 (815)
Q Consensus 515 ~ig~G~~g~Vy~~~-~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL~~ 593 (815)
++|+|.||+||-|+ ..+...+|||.+........+-+..||.+-++++|.|||+++|.|.+++..-+.||-++||||.+
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs 661 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS 661 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence 69999999999999 45677899999987666666778899999999999999999999999888899999999999999
Q ss_pred hhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCceEEc-C
Q 003504 594 LLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLD-M 672 (815)
Q Consensus 594 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NIll~-~ 672 (815)
+|+..=.+. .-.....--...||++||.||| +..|||||||-+||||+ -
T Consensus 662 LLrskWGPl---------------------------KDNEstm~fYtkQILeGLkYLH---en~IVHRDIKGDNVLvNTy 711 (1226)
T KOG4279|consen 662 LLRSKWGPL---------------------------KDNESTMNFYTKQILEGLKYLH---ENKIVHRDIKGDNVLVNTY 711 (1226)
T ss_pred HHHhccCCC---------------------------ccchhHHHHHHHHHHHHhhhhh---hcceeeccccCCcEEEeec
Confidence 998631110 0122334456789999999999 89999999999999997 5
Q ss_pred CCCeeecccccceecCCCC-ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCccccccHH
Q 003504 673 NLEPRLSDFGLAKIFGNGL-DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLV 751 (815)
Q Consensus 673 ~~~~kl~Dfgla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~ 751 (815)
.|.+||+|||.++.+..-. ...++.||..|||||++-.+...|+.++|||||||.+-||.||++||........
T Consensus 712 SGvlKISDFGTsKRLAginP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqA----- 786 (1226)
T KOG4279|consen 712 SGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQA----- 786 (1226)
T ss_pred cceEEecccccchhhccCCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhH-----
Confidence 7899999999998875322 3456679999999999988777789999999999999999999999985322211
Q ss_pred HHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 752 SWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 752 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
..++ -+ .-...+.-|++...+...++.+|+.+||.+||+++++++
T Consensus 787 AMFk----VG------myKvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 787 AMFK----VG------MYKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred hhhh----hc------ceecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 1111 10 001223347888999999999999999999999999875
No 160
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=2.7e-36 Score=315.64 Aligned_cols=249 Identities=23% Similarity=0.348 Sum_probs=200.3
Q ss_pred cCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCcc-----cHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEE
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGSTL-----TDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIA 581 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~-----~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 581 (815)
++|...+.||+|++|.||+|.. .++.+||+|.+...... ..+.+.+|++++++++||||+++++++.+.+..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 4688899999999999999985 56899999998643211 23468899999999999999999999999999999
Q ss_pred EEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeec
Q 003504 582 IYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHR 661 (815)
Q Consensus 582 v~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHr 661 (815)
|+||+++++|.+++... ..+++....+++.|++.||+||| +.+++||
T Consensus 82 v~e~~~~~~l~~~~~~~------------------------------~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~ 128 (263)
T cd06625 82 FMEYMPGGSVKDQLKAY------------------------------GALTETVTRKYTRQILEGVEYLH---SNMIVHR 128 (263)
T ss_pred EEEECCCCcHHHHHHHh------------------------------CCCCHHHHHHHHHHHHHHHHHHH---hCCeecC
Confidence 99999999999998642 24667788899999999999999 8899999
Q ss_pred cCCCCceEEcCCCCeeecccccceecCCCCcc----ccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCC
Q 003504 662 DIKASSVYLDMNLEPRLSDFGLAKIFGNGLDE----EIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKP 737 (815)
Q Consensus 662 Dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p 737 (815)
||+|+||++++++.++|+|||+++........ ....|+..|+|||.+.+.. ++.++||||||+++||+++|+.|
T Consensus 129 dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~Di~slG~il~el~~g~~p 206 (263)
T cd06625 129 DIKGANILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEG--YGRKADVWSVGCTVVEMLTEKPP 206 (263)
T ss_pred CCCHHHEEEcCCCCEEEeecccceeccccccccccccCCCcCccccCcceeccCC--CCchhhhHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999865432211 2345788999999998766 78999999999999999999999
Q ss_pred CCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003504 738 LGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGL 807 (815)
Q Consensus 738 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~ 807 (815)
|...... .. ........ .....+......+.+++.+||..+|++||++.++++.
T Consensus 207 ~~~~~~~------~~-~~~~~~~~---------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 207 WAEFEAM------AA-IFKIATQP---------TNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred ccccchH------HH-HHHHhccC---------CCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 9753211 11 11111110 1112234456678999999999999999999999864
No 161
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-37 Score=309.20 Aligned_cols=272 Identities=28% Similarity=0.313 Sum_probs=221.6
Q ss_pred cCHHHHHHHhcCCCCCCeecccCCeeeEEEEcC------CCcEEEEEEeecC-CcccHHHHHHHHHHhcCCCCCCceeee
Q 003504 498 ITFADLLSATSNFDRGTLLAEGKFGPVYRGFLP------GGIHVAVKVLVHG-STLTDQEAARELEYLGRIKHPNLVPLT 570 (815)
Q Consensus 498 ~~~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~ 570 (815)
-...++.....+++....+.+|.||.||+|.|. +.+.|.||.++.. ++..-..+..|--.+..+.|||+.++.
T Consensus 274 ~r~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~ 353 (563)
T KOG1024|consen 274 RRLQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVL 353 (563)
T ss_pred hhHHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCcccee
Confidence 345667677778888899999999999999654 3456778877543 233345677888888899999999999
Q ss_pred eEEEe-CCeeEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHH
Q 003504 571 GYCIA-GDQRIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAF 649 (815)
Q Consensus 571 g~~~~-~~~~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~y 649 (815)
|++.+ .+.++++|.|+.-|+|..||...+... .+....++-.+...+|.|+|.|++|
T Consensus 354 ~V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~----------------------~~~aqtvtt~qlV~masQla~am~h 411 (563)
T KOG1024|consen 354 GVSIEDYATPFVLYPATGVGNLKSFLQICRGDD----------------------PSYAQTVTTIQLVLMASQLAMAMEH 411 (563)
T ss_pred EEEeeccCcceEEEeccCcchHHHHHHHhccCC----------------------CccccchhHHHHHHHHHHHHHHHHH
Confidence 99976 457899999999999999998653110 1224456667788999999999999
Q ss_pred HhcCCCCCeeeccCCCCceEEcCCCCeeecccccceecCCCCccc---cccccccccCCcccCCCCCCCCCcCcchhHHH
Q 003504 650 LHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEE---IARGSPGYIPPEFAQPDSDFPTPKSDVYCYGV 726 (815)
Q Consensus 650 LH~~~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gv 726 (815)
|| ..++||.||.++|++||+..++||+|=.+++.+-++.-.. ..-....||+||.+.... ++.++|||||||
T Consensus 412 lh---~~~ViHkDiAaRNCvIdd~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~--yssasDvWsfGV 486 (563)
T KOG1024|consen 412 LH---NHGVIHKDIAARNCVIDDQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSH--YSSASDVWSFGV 486 (563)
T ss_pred HH---hcCcccchhhhhcceehhheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhh--hcchhhhHHHHH
Confidence 99 8999999999999999999999999999999875543111 112466899999998877 799999999999
Q ss_pred HHHHHHh-CCCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHH
Q 003504 727 VLLELIT-GKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIV 805 (815)
Q Consensus 727 vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~ 805 (815)
+||||+| |+.||.+-+|.|.+. ++..+++..+|.+|+.+++.+|..||+.+|++||+++|++
T Consensus 487 llWELmtlg~~PyaeIDPfEm~~-----------------ylkdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv 549 (563)
T KOG1024|consen 487 LLWELMTLGKLPYAEIDPFEMEH-----------------YLKDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLV 549 (563)
T ss_pred HHHHHHhcCCCCccccCHHHHHH-----------------HHhccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHH
Confidence 9999999 999998776665432 2234566777999999999999999999999999999999
Q ss_pred HHHHhhhh
Q 003504 806 GLLKDIES 813 (815)
Q Consensus 806 ~~L~~i~~ 813 (815)
..|.++..
T Consensus 550 ~cLseF~~ 557 (563)
T KOG1024|consen 550 ICLSEFHT 557 (563)
T ss_pred HHHHHHHH
Confidence 99999864
No 162
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=4.9e-36 Score=314.80 Aligned_cols=255 Identities=21% Similarity=0.294 Sum_probs=193.4
Q ss_pred CeecccCCeeeEEEEcCC---CcEEEEEEeecCCc-ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeCCCC
Q 003504 514 TLLAEGKFGPVYRGFLPG---GIHVAVKVLVHGST-LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENG 589 (815)
Q Consensus 514 ~~ig~G~~g~Vy~~~~~~---~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~g 589 (815)
+.||+|+||.||+|...+ +..+|+|.++.... .....+.+|+.++++++||||++++|++.+....++||||+++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 368999999999998543 45799998865432 23457889999999999999999999999988999999999999
Q ss_pred ChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCceE
Q 003504 590 NLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVY 669 (815)
Q Consensus 590 sL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NIl 669 (815)
+|.++++.... ......++..+..++.|++.||+||| +.+++||||||+||+
T Consensus 81 ~L~~~l~~~~~-------------------------~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dlkp~nil 132 (269)
T cd05087 81 DLKGYLRSCRK-------------------------AELMTPDPTTLQRMACEIALGLLHLH---KNNFIHSDLALRNCL 132 (269)
T ss_pred cHHHHHHHhhh-------------------------cccccccHHHHHHHHHHHHHHHHHHH---HCCEeccccCcceEE
Confidence 99999975311 11234677888899999999999999 889999999999999
Q ss_pred EcCCCCeeecccccceecCCCCc---cccccccccccCCcccCCCC-----CCCCCcCcchhHHHHHHHHHh-CCCCCCC
Q 003504 670 LDMNLEPRLSDFGLAKIFGNGLD---EEIARGSPGYIPPEFAQPDS-----DFPTPKSDVYCYGVVLLELIT-GKKPLGD 740 (815)
Q Consensus 670 l~~~~~~kl~Dfgla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~-----~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~ 740 (815)
++.++.+||+|||+++....... .....|+..|+|||++.... ..++.++||||||+++|||++ |+.||..
T Consensus 133 ~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~ 212 (269)
T cd05087 133 LTADLTVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRH 212 (269)
T ss_pred EcCCCcEEECCccccccccCcceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCC
Confidence 99999999999999976543321 22344678899999886432 124789999999999999996 9999975
Q ss_pred CCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 003504 741 DYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLK 809 (815)
Q Consensus 741 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~ 809 (815)
....+. ..+ .. .+......++.+.. ....++.+++..|| .+|++||++++|++.|+
T Consensus 213 ~~~~~~----~~~---~~-~~~~~~~~~~~~~~----~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 213 LSDEQV----LTY---TV-REQQLKLPKPRLKL----PLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CChHHH----HHH---Hh-hcccCCCCCCccCC----CCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 332211 111 01 11112222232221 23446788999999 58999999999998875
No 163
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=2e-36 Score=320.29 Aligned_cols=250 Identities=23% Similarity=0.271 Sum_probs=199.1
Q ss_pred CCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCcc---cHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEe
Q 003504 510 FDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGSTL---TDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDY 585 (815)
Q Consensus 510 ~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~---~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 585 (815)
|+..+.||+|+||.||+|.. .+++.||||.+...... ....+.+|+.++++++|+|++++++++.+.+..++||||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence 66778999999999999985 46889999998653222 234567899999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCC
Q 003504 586 MENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKA 665 (815)
Q Consensus 586 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~ 665 (815)
+++|+|.+++... ....+++..+..++.|++.||.||| +.+|+||||||
T Consensus 82 ~~g~~L~~~l~~~----------------------------~~~~l~~~~~~~~~~qi~~~l~~lH---~~~iiH~dikp 130 (285)
T cd05630 82 MNGGDLKFHIYHM----------------------------GEAGFEEGRAVFYAAEICCGLEDLH---QERIVYRDLKP 130 (285)
T ss_pred cCCCcHHHHHHHh----------------------------cccCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCH
Confidence 9999999998642 1234778889999999999999999 89999999999
Q ss_pred CceEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCcc
Q 003504 666 SSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEE 745 (815)
Q Consensus 666 ~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~ 745 (815)
+||+++.++.++|+|||++.............|+..|+|||++.... ++.++|||||||++|||++|+.||.......
T Consensus 131 ~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~--~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~ 208 (285)
T cd05630 131 ENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNER--YTFSPDWWALGCLLYEMIAGQSPFQQRKKKI 208 (285)
T ss_pred HHEEECCCCCEEEeeccceeecCCCccccCCCCCccccChHHHcCCC--CCCccccHHHHHHHHHHHhCCCCCCCCCccc
Confidence 99999999999999999998765443334456899999999987665 7889999999999999999999997532211
Q ss_pred ccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCC-----HHHHHH
Q 003504 746 KEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPS-----MQQIVG 806 (815)
Q Consensus 746 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs-----~~~v~~ 806 (815)
...... ..... .....+...+.++.+++.+||+.||++||+ ++++++
T Consensus 209 ~~~~~~----~~~~~----------~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 209 KREEVE----RLVKE----------VQEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred hHHHHH----hhhhh----------hhhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 111111 11110 001112334567889999999999999999 888876
No 164
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=1.2e-36 Score=319.44 Aligned_cols=252 Identities=26% Similarity=0.403 Sum_probs=200.2
Q ss_pred CCCCCCeecccCCeeeEEEEcC-CC---cEEEEEEeecCC-cccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEE
Q 003504 509 NFDRGTLLAEGKFGPVYRGFLP-GG---IHVAVKVLVHGS-TLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIY 583 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~~-~~---~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 583 (815)
+|.+.+.||+|+||.||+|... ++ ..||||.+.... ....+.|..|+.++++++||||+++++++.++...++||
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 84 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIIT 84 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEE
Confidence 4677899999999999999964 23 369999986542 233567999999999999999999999999999999999
Q ss_pred EeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccC
Q 003504 584 DYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDI 663 (815)
Q Consensus 584 ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDl 663 (815)
||+++|+|.++++.. ...+++..+..++.|++.||+||| +.+++||||
T Consensus 85 e~~~~~~L~~~l~~~-----------------------------~~~~~~~~~~~i~~~l~~al~~lH---~~g~~H~dl 132 (269)
T cd05065 85 EFMENGALDSFLRQN-----------------------------DGQFTVIQLVGMLRGIAAGMKYLS---EMNYVHRDL 132 (269)
T ss_pred ecCCCCcHHHHHhhC-----------------------------CCCCCHHHHHHHHHHHHHHHHHHH---HCCEeeccc
Confidence 999999999999752 234788999999999999999999 899999999
Q ss_pred CCCceEEcCCCCeeecccccceecCCCCccc---ccc---ccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CCC
Q 003504 664 KASSVYLDMNLEPRLSDFGLAKIFGNGLDEE---IAR---GSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GKK 736 (815)
Q Consensus 664 k~~NIll~~~~~~kl~Dfgla~~~~~~~~~~---~~~---gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~ 736 (815)
||+||+++.++.+||+|||+++......... ... .+..|+|||.+.... ++.++|||||||++||+++ |..
T Consensus 133 ~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~--~~~~~DvwslG~~l~e~l~~g~~ 210 (269)
T cd05065 133 AARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRK--FTSASDVWSYGIVMWEVMSYGER 210 (269)
T ss_pred ChheEEEcCCCcEEECCCccccccccCccccccccccCCCcceeecCHhHhccCc--ccchhhhhhhHHHHHHHhcCCCC
Confidence 9999999999999999999987654322111 111 245799999987655 6889999999999999987 999
Q ss_pred CCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhh
Q 003504 737 PLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDI 811 (815)
Q Consensus 737 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 811 (815)
||...... ....++. .. .....+.+++..+.+++.+||+.+|++||++++|++.|+++
T Consensus 211 p~~~~~~~----~~~~~i~----~~---------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 211 PYWDMSNQ----DVINAIE----QD---------YRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred CCCCCCHH----HHHHHHH----cC---------CcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 98753221 1222111 11 01111234566789999999999999999999999999875
No 165
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=3.5e-37 Score=339.62 Aligned_cols=250 Identities=20% Similarity=0.233 Sum_probs=193.5
Q ss_pred cCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCc---ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEE
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGST---LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIY 583 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 583 (815)
++|.+.+.||+|+||.||+|.. .+++.||||++..... ...+.+.+|++++++++||||+++++++.+....++||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 3688899999999999999984 5788999999865321 22346788999999999999999999999999999999
Q ss_pred EeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccC
Q 003504 584 DYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDI 663 (815)
Q Consensus 584 ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDl 663 (815)
||+++|+|.+++... ..+++.....++.|++.||+||| +.+|+||||
T Consensus 81 E~~~gg~L~~~l~~~------------------------------~~~~~~~~~~~~~ql~~aL~~LH---~~givHrDl 127 (377)
T cd05629 81 EFLPGGDLMTMLIKY------------------------------DTFSEDVTRFYMAECVLAIEAVH---KLGFIHRDI 127 (377)
T ss_pred eCCCCCcHHHHHHhc------------------------------CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCC
Confidence 999999999998642 24566777889999999999999 899999999
Q ss_pred CCCceEEcCCCCeeecccccceecCCCC------------------------------------------------cccc
Q 003504 664 KASSVYLDMNLEPRLSDFGLAKIFGNGL------------------------------------------------DEEI 695 (815)
Q Consensus 664 k~~NIll~~~~~~kl~Dfgla~~~~~~~------------------------------------------------~~~~ 695 (815)
||+|||++.++.+||+|||+++.+.... ....
T Consensus 128 kp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (377)
T cd05629 128 KPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYS 207 (377)
T ss_pred CHHHEEECCCCCEEEeecccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccc
Confidence 9999999999999999999996432100 0012
Q ss_pred ccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCC
Q 003504 696 ARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTG 775 (815)
Q Consensus 696 ~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 775 (815)
..||+.|+|||++.+.. ++.++|||||||++|||++|+.||....+.+.. ....... .. +....
T Consensus 208 ~~gt~~y~aPE~~~~~~--~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~-------~~i~~~~--~~-----~~~p~ 271 (377)
T cd05629 208 TVGTPDYIAPEIFLQQG--YGQECDWWSLGAIMFECLIGWPPFCSENSHETY-------RKIINWR--ET-----LYFPD 271 (377)
T ss_pred cCCCccccCHHHHccCC--CCCceeeEecchhhhhhhcCCCCCCCCCHHHHH-------HHHHccC--Cc-----cCCCC
Confidence 45999999999987665 789999999999999999999999764332211 1111100 00 00001
Q ss_pred CHHHHHHHHHHHhhccccCCCCC---CCHHHHHHH
Q 003504 776 PEKQMEEALKIGYLCTADLPLKR---PSMQQIVGL 807 (815)
Q Consensus 776 ~~~~~~~~~~l~~~Cl~~dP~~R---Ps~~~v~~~ 807 (815)
....+.++.+++.+|+. +|.+| |++.++++.
T Consensus 272 ~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~h 305 (377)
T cd05629 272 DIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSH 305 (377)
T ss_pred CCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcC
Confidence 11234678899999997 67765 599988764
No 166
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=2.8e-37 Score=334.30 Aligned_cols=252 Identities=21% Similarity=0.219 Sum_probs=199.3
Q ss_pred cCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCc---ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEE
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGST---LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIY 583 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 583 (815)
++|.+.+.||+|+||.||+|.. .+++.||||+++.... ...+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 3688889999999999999985 5688999999975322 23456889999999999999999999999999999999
Q ss_pred EeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccC
Q 003504 584 DYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDI 663 (815)
Q Consensus 584 ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDl 663 (815)
||+++|+|.+++... ...+++.....++.|++.||+||| +.+|+||||
T Consensus 81 e~~~~~~L~~~l~~~-----------------------------~~~l~~~~~~~~~~qi~~aL~~lH---~~~i~H~Dl 128 (330)
T cd05601 81 EYQPGGDLLSLLNRY-----------------------------EDQFDEDMAQFYLAELVLAIHSVH---QMGYVHRDI 128 (330)
T ss_pred CCCCCCCHHHHHHHh-----------------------------cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEcccC
Confidence 999999999999752 235778888899999999999999 899999999
Q ss_pred CCCceEEcCCCCeeecccccceecCCCCc--cccccccccccCCcccCCC----CCCCCCcCcchhHHHHHHHHHhCCCC
Q 003504 664 KASSVYLDMNLEPRLSDFGLAKIFGNGLD--EEIARGSPGYIPPEFAQPD----SDFPTPKSDVYCYGVVLLELITGKKP 737 (815)
Q Consensus 664 k~~NIll~~~~~~kl~Dfgla~~~~~~~~--~~~~~gt~~y~aPE~~~~~----~~~~~~~~Dv~S~Gvvl~el~tg~~p 737 (815)
||+|||++.++.+||+|||++........ .....||+.|+|||++... ...++.++|||||||++|||++|+.|
T Consensus 129 kp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~P 208 (330)
T cd05601 129 KPENVLIDRTGHIKLADFGSAARLTANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSP 208 (330)
T ss_pred chHheEECCCCCEEeccCCCCeECCCCCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCC
Confidence 99999999999999999999987654322 2234689999999988632 12267899999999999999999999
Q ss_pred CCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 738 LGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 738 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
|......+ ............. .......+.++.+++..|+. +|++||+++++++
T Consensus 209 f~~~~~~~-------~~~~i~~~~~~~~-------~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 209 FHEGTSAK-------TYNNIMNFQRFLK-------FPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred CCCCCHHH-------HHHHHHcCCCccC-------CCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence 97533221 1222221111000 00112245678899999997 9999999999874
No 167
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=1.8e-36 Score=318.03 Aligned_cols=259 Identities=22% Similarity=0.268 Sum_probs=202.5
Q ss_pred HHHHhcCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEE
Q 003504 503 LLSATSNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIA 581 (815)
Q Consensus 503 l~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 581 (815)
++.+++.+.....||+|+||.||+|.. .++..||+|.+........+.+.+|+.++++++||||+++++++..++..++
T Consensus 3 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 82 (268)
T cd06624 3 YEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKI 82 (268)
T ss_pred cccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEE
Confidence 344566777778999999999999994 5678899999876555556789999999999999999999999999999999
Q ss_pred EEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeec
Q 003504 582 IYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHR 661 (815)
Q Consensus 582 v~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHr 661 (815)
|+||+++++|.++++... .....++..+..++.|++.||+||| +.+|+||
T Consensus 83 v~e~~~~~~L~~~l~~~~---------------------------~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~h~ 132 (268)
T cd06624 83 FMEQVPGGSLSALLRSKW---------------------------GPLKDNEQTIIFYTKQILEGLKYLH---DNQIVHR 132 (268)
T ss_pred EEecCCCCCHHHHHHHhc---------------------------ccCCCcHHHHHHHHHHHHHHHHHHH---HCCEeec
Confidence 999999999999997521 0111267778889999999999999 8899999
Q ss_pred cCCCCceEEcC-CCCeeecccccceecCCCC-ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCC
Q 003504 662 DIKASSVYLDM-NLEPRLSDFGLAKIFGNGL-DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLG 739 (815)
Q Consensus 662 Dlk~~NIll~~-~~~~kl~Dfgla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~ 739 (815)
||||+||+++. ++.+||+|||.+....... ......|+..|+|||++......++.++|||||||++||+++|+.||.
T Consensus 133 dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~ 212 (268)
T cd06624 133 DIKGDNVLVNTYSGVVKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFI 212 (268)
T ss_pred CCCHHHEEEcCCCCeEEEecchhheecccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCc
Confidence 99999999986 6789999999997654322 222345889999999986654336889999999999999999999986
Q ss_pred CCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 740 DDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 740 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
...... ...+...... .....+.....++.+++.+||..+|++||++.++++
T Consensus 213 ~~~~~~----~~~~~~~~~~-----------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 213 ELGEPQ----AAMFKVGMFK-----------IHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred cccChh----hhHhhhhhhc-----------cCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 422110 1111110000 011123345677899999999999999999999975
No 168
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=2.8e-36 Score=321.33 Aligned_cols=269 Identities=23% Similarity=0.326 Sum_probs=203.7
Q ss_pred cCCCCCCeecccCCeeeEEEEcC-----------------CCcEEEEEEeecCC-cccHHHHHHHHHHhcCCCCCCceee
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFLP-----------------GGIHVAVKVLVHGS-TLTDQEAARELEYLGRIKHPNLVPL 569 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~~-----------------~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l 569 (815)
++|++.+.||+|+||.||++... ++..||+|.+.... ......+.+|++++++++||||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 46888999999999999998532 24468999987542 2334678999999999999999999
Q ss_pred eeEEEeCCeeEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHH
Q 003504 570 TGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAF 649 (815)
Q Consensus 570 ~g~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~y 649 (815)
++++...+..++||||+++|+|.+++......... .......+++.....++.|++.||+|
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~i~~al~~ 145 (296)
T cd05095 85 LAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAA-------------------EKADVVTISYSTLIFMATQIASGMKY 145 (296)
T ss_pred EEEEecCCccEEEEEeCCCCcHHHHHHhcCccccc-------------------ccccccccCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999764211000 01223468899999999999999999
Q ss_pred HhcCCCCCeeeccCCCCceEEcCCCCeeecccccceecCCCCc---cccccccccccCCcccCCCCCCCCCcCcchhHHH
Q 003504 650 LHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLD---EEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGV 726 (815)
Q Consensus 650 LH~~~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gv 726 (815)
|| +.+++||||||+||+++.++.+||+|||+++.+..... .....++..|+|||...... ++.++|||||||
T Consensus 146 lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~--~~~~~DiwSlG~ 220 (296)
T cd05095 146 LS---SLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGK--FTTASDVWAFGV 220 (296)
T ss_pred HH---HCCeecccCChheEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCC--ccchhhhhHHHH
Confidence 99 88999999999999999999999999999986643321 11223467899999876655 788999999999
Q ss_pred HHHHHHh--CCCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHH
Q 003504 727 VLLELIT--GKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQI 804 (815)
Q Consensus 727 vl~el~t--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v 804 (815)
++|||++ |..||......+. ............ ..... ..+..++..+.+++.+||+.||++||++.+|
T Consensus 221 ~l~el~~~~~~~p~~~~~~~~~----~~~~~~~~~~~~-~~~~~-----~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i 290 (296)
T cd05095 221 TLWEILTLCKEQPYSQLSDEQV----IENTGEFFRDQG-RQVYL-----PKPALCPDSLYKLMLSCWRRNAKERPSFQEI 290 (296)
T ss_pred HHHHHHHhCCCCCccccChHHH----HHHHHHHHhhcc-ccccC-----CCCCCCCHHHHHHHHHHcCCCcccCCCHHHH
Confidence 9999998 7788864332221 111111111111 00111 1123345788999999999999999999999
Q ss_pred HHHHHh
Q 003504 805 VGLLKD 810 (815)
Q Consensus 805 ~~~L~~ 810 (815)
.+.|++
T Consensus 291 ~~~l~~ 296 (296)
T cd05095 291 HATLLE 296 (296)
T ss_pred HHHHhC
Confidence 999863
No 169
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=1.7e-36 Score=316.70 Aligned_cols=240 Identities=22% Similarity=0.311 Sum_probs=188.3
Q ss_pred CeecccCCeeeEEEEcCC-------------CcEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeE
Q 003504 514 TLLAEGKFGPVYRGFLPG-------------GIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRI 580 (815)
Q Consensus 514 ~~ig~G~~g~Vy~~~~~~-------------~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 580 (815)
+.||+|+||.||+|+..+ ...||+|.+..........+.+|+.+++.++||||+++++++......+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~ 80 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI 80 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence 468999999999998532 2358999876544444567889999999999999999999999988999
Q ss_pred EEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeee
Q 003504 581 AIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIH 660 (815)
Q Consensus 581 lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivH 660 (815)
+||||+++|+|..+++.. ...+++..+.+++.|+++||+||| +.+|+|
T Consensus 81 lv~e~~~~~~l~~~~~~~-----------------------------~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH 128 (262)
T cd05077 81 MVEEFVEFGPLDLFMHRK-----------------------------SDVLTTPWKFKVAKQLASALSYLE---DKDLVH 128 (262)
T ss_pred EEEecccCCCHHHHHHhc-----------------------------CCCCCHHHHHHHHHHHHHHHHHhh---hCCeEC
Confidence 999999999999988642 235788889999999999999999 899999
Q ss_pred ccCCCCceEEcCCCC-------eeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh
Q 003504 661 RDIKASSVYLDMNLE-------PRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT 733 (815)
Q Consensus 661 rDlk~~NIll~~~~~-------~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t 733 (815)
|||||+|||++.++. +|++|||++...... ....++..|+|||.+..... ++.++|||||||++|||++
T Consensus 129 ~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~~---~~~~~~~~y~aPE~~~~~~~-~~~~~DiwslG~~l~el~~ 204 (262)
T cd05077 129 GNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLSR---QECVERIPWIAPECVEDSKN-LSIAADKWSFGTTLWEICY 204 (262)
T ss_pred CCCCcccEEEecCCccCCCCceeEeCCCCCCccccCc---ccccccccccChhhhcCCCC-CCchhHHHHHHHHHHHHHh
Confidence 999999999987664 899999998765322 23457889999998764332 6889999999999999984
Q ss_pred -CCCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 003504 734 -GKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLL 808 (815)
Q Consensus 734 -g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L 808 (815)
|+.||......+. ....... ... ......++.+++.+||+.||++||++.++++.+
T Consensus 205 ~~~~p~~~~~~~~~--------~~~~~~~--~~~---------~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 205 NGEIPLKDKTLAEK--------ERFYEGQ--CML---------VTPSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred CCCCCCCCcchhHH--------HHHHhcC--ccC---------CCCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 8888764322111 1111110 000 111245788999999999999999999999876
No 170
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=5.2e-36 Score=316.31 Aligned_cols=250 Identities=21% Similarity=0.336 Sum_probs=197.2
Q ss_pred CCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCC-cccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeC
Q 003504 509 NFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGS-TLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYM 586 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 586 (815)
+|+..+.||+|+||.||+|.. .++..||+|.+.... ......+.+|++++++++||||+++++++...+..++||||+
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 81 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFM 81 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecC
Confidence 577889999999999999984 578899999986542 233457889999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCC
Q 003504 587 ENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKAS 666 (815)
Q Consensus 587 ~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~ 666 (815)
++|+|..+. .+++.....++.|++.||+||| +.+|+||||||+
T Consensus 82 ~~~~l~~~~----------------------------------~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~ 124 (279)
T cd06619 82 DGGSLDVYR----------------------------------KIPEHVLGRIAVAVVKGLTYLW---SLKILHRDVKPS 124 (279)
T ss_pred CCCChHHhh----------------------------------cCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCCHH
Confidence 999986543 2356677889999999999999 899999999999
Q ss_pred ceEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCccc
Q 003504 667 SVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEK 746 (815)
Q Consensus 667 NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~ 746 (815)
||+++.++.+||+|||++...... ......|+..|+|||.+.+.. ++.++||||||+++|||++|+.||........
T Consensus 125 Nill~~~~~~~l~dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~--~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~ 201 (279)
T cd06619 125 NMLVNTRGQVKLCDFGVSTQLVNS-IAKTYVGTNAYMAPERISGEQ--YGIHSDVWSLGISFMELALGRFPYPQIQKNQG 201 (279)
T ss_pred HEEECCCCCEEEeeCCcceecccc-cccCCCCChhhcCceeecCCC--CCCcchHHHHHHHHHHHHhCCCCchhhccccc
Confidence 999999999999999999876433 233456899999999987665 68899999999999999999999975332221
Q ss_pred cccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003504 747 EGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGL 807 (815)
Q Consensus 747 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~ 807 (815)
......+........ .+... ....+.++.+++.+||+.+|++||+++++++.
T Consensus 202 ~~~~~~~~~~~~~~~------~~~~~---~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 202 SLMPLQLLQCIVDED------PPVLP---VGQFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred ccchHHHHHHHhccC------CCCCC---CCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 111112111111110 11111 12234578899999999999999999999754
No 171
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=2.8e-36 Score=321.42 Aligned_cols=270 Identities=23% Similarity=0.319 Sum_probs=205.2
Q ss_pred hcCCCCCCeecccCCeeeEEEEcCC-----------------CcEEEEEEeecCCc-ccHHHHHHHHHHhcCCCCCCcee
Q 003504 507 TSNFDRGTLLAEGKFGPVYRGFLPG-----------------GIHVAVKVLVHGST-LTDQEAARELEYLGRIKHPNLVP 568 (815)
Q Consensus 507 ~~~~~~~~~ig~G~~g~Vy~~~~~~-----------------~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~ 568 (815)
.++|++.+.||+|+||.||+|...+ +..||+|.+..... ...+.+.+|++++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 4578899999999999999988532 34689999875432 33567889999999999999999
Q ss_pred eeeEEEeCCeeEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHH
Q 003504 569 LTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALA 648 (815)
Q Consensus 569 l~g~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~ 648 (815)
+++++...+..++|+||+++++|.+++.......... ......+++.....++.|++.||+
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~i~~al~ 144 (296)
T cd05051 84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGL-------------------ACNSKSLSFSTLLYMATQIASGMR 144 (296)
T ss_pred EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccc-------------------cccCCCCCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999997532110000 012346889999999999999999
Q ss_pred HHhcCCCCCeeeccCCCCceEEcCCCCeeecccccceecCCCC---ccccccccccccCCcccCCCCCCCCCcCcchhHH
Q 003504 649 FLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGL---DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYG 725 (815)
Q Consensus 649 yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~G 725 (815)
||| +.+++||||||+||+++.++.++|+|||+++...... ......++..|+|||.+.... ++.++||||||
T Consensus 145 ~LH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~Dv~slG 219 (296)
T cd05051 145 YLE---SLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGK--FTTKSDVWAFG 219 (296)
T ss_pred HHH---HcCccccccchhceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCC--CCccchhhhhH
Confidence 999 8899999999999999999999999999998654322 122334677899999987655 78999999999
Q ss_pred HHHHHHHh--CCCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHH
Q 003504 726 VVLLELIT--GKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQ 803 (815)
Q Consensus 726 vvl~el~t--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~ 803 (815)
|++||+++ |..||..... ..+...+......... ......+..++.++.+++.+||+.||++||++.+
T Consensus 220 ~~l~el~~~~~~~p~~~~~~----~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~e 289 (296)
T cd05051 220 VTLWEILTLCREQPYEHLTD----QQVIENAGHFFRDDGR------QIYLPRPPNCPKDIYELMLECWRRDEEDRPTFRE 289 (296)
T ss_pred HHHHHHHhcCCCCCCCCcCh----HHHHHHHHhccccccc------cccCCCccCCCHHHHHHHHHHhccChhcCCCHHH
Confidence 99999998 6777764322 1122222211111110 0111112334568999999999999999999999
Q ss_pred HHHHHHh
Q 003504 804 IVGLLKD 810 (815)
Q Consensus 804 v~~~L~~ 810 (815)
|++.|++
T Consensus 290 l~~~L~~ 296 (296)
T cd05051 290 IHLFLQR 296 (296)
T ss_pred HHHHhcC
Confidence 9998863
No 172
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=2.3e-36 Score=315.58 Aligned_cols=253 Identities=26% Similarity=0.399 Sum_probs=203.3
Q ss_pred hcCCCCCCeecccCCeeeEEEEcCCCcEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeC
Q 003504 507 TSNFDRGTLLAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYM 586 (815)
Q Consensus 507 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 586 (815)
.++|.+.+.||+|+||.||+|...++..+|+|.+... ....+.+.+|++++++++|+||+++.+++.. ...+++|||+
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~ 82 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFM 82 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecCCccEEEEecCCC-hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeC
Confidence 3578889999999999999999877888999988653 3345678999999999999999999999887 7789999999
Q ss_pred CCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCC
Q 003504 587 ENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKAS 666 (815)
Q Consensus 587 ~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~ 666 (815)
++|+|.+++... .....+|..+..++.|++.||+||| +.+++||||||+
T Consensus 83 ~~~~L~~~~~~~----------------------------~~~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~ 131 (260)
T cd05073 83 AKGSLLDFLKSD----------------------------EGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAA 131 (260)
T ss_pred CCCcHHHHHHhC----------------------------CccccCHHHHHHHHHHHHHHHHHHH---hCCccccccCcc
Confidence 999999999752 1335788899999999999999999 789999999999
Q ss_pred ceEEcCCCCeeecccccceecCCCCc--cccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCC
Q 003504 667 SVYLDMNLEPRLSDFGLAKIFGNGLD--EEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GKKPLGDDYP 743 (815)
Q Consensus 667 NIll~~~~~~kl~Dfgla~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~ 743 (815)
||+++.++.+||+|||.+........ .....++..|+|||++.... ++.++|||||||++||+++ |+.||.....
T Consensus 132 ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~--~~~~~Di~slG~~l~~l~t~g~~p~~~~~~ 209 (260)
T cd05073 132 NILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGS--FTIKSDVWSFGILLMEIVTYGRIPYPGMSN 209 (260)
T ss_pred eEEEcCCCcEEECCCcceeeccCCCcccccCCcccccccCHhHhccCC--cCccccchHHHHHHHHHHhcCCCCCCCCCH
Confidence 99999999999999999986643221 12233567899999987655 6889999999999999999 8999865322
Q ss_pred ccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhh
Q 003504 744 EEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDI 811 (815)
Q Consensus 744 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 811 (815)
. .+..+ .... .....+...+.++.+++.+||+.+|++||++.++.+.|+.+
T Consensus 210 ~----~~~~~----~~~~---------~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~~ 260 (260)
T cd05073 210 P----EVIRA----LERG---------YRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDF 260 (260)
T ss_pred H----HHHHH----HhCC---------CCCCCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhcC
Confidence 1 11111 1111 01111234556799999999999999999999999999753
No 173
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=1.5e-36 Score=322.08 Aligned_cols=264 Identities=22% Similarity=0.308 Sum_probs=203.1
Q ss_pred HhcCCCCCCeecccCCeeeEEEEcC------CCcEEEEEEeecCCc-ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCe
Q 003504 506 ATSNFDRGTLLAEGKFGPVYRGFLP------GGIHVAVKVLVHGST-LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQ 578 (815)
Q Consensus 506 ~~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~ 578 (815)
..++|++.+.||+|+||.||+|... .+..||+|.+..... .....+.+|+.++++++||||+++++++.+...
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQP 83 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 4568999999999999999999743 245799998864332 223467889999999999999999999999999
Q ss_pred eEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCe
Q 003504 579 RIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPI 658 (815)
Q Consensus 579 ~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~i 658 (815)
.++||||+++|+|.++++....... ........++....+++.|++.||+||| +++|
T Consensus 84 ~~lv~e~~~~g~L~~~l~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i 140 (288)
T cd05061 84 TLVVMELMAHGDLKSYLRSLRPEAE--------------------NNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKF 140 (288)
T ss_pred cEEEEeCCCCCCHHHHHHHhccccc--------------------cCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCC
Confidence 9999999999999999975321100 0011234677888999999999999999 8999
Q ss_pred eeccCCCCceEEcCCCCeeecccccceecCCCCc---cccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-C
Q 003504 659 IHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLD---EEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-G 734 (815)
Q Consensus 659 vHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g 734 (815)
+||||||+||++++++.+||+|||+++....... .....++..|+|||.+.+.. ++.++|||||||++||+++ |
T Consensus 141 ~H~dikp~nili~~~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~--~~~~~DvwslG~~l~el~~~~ 218 (288)
T cd05061 141 VHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGV--FTTSSDMWSFGVVLWEITSLA 218 (288)
T ss_pred cCCCCChheEEEcCCCcEEECcCCccccccccccccccCCCcccccccCHHHhccCC--CChHhHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999986543221 11223567899999987655 6889999999999999999 7
Q ss_pred CCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhh
Q 003504 735 KKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDI 811 (815)
Q Consensus 735 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 811 (815)
..||.....+ +.......... ...+..++..+.+++.+||+.+|++||++.++++.|++.
T Consensus 219 ~~p~~~~~~~-------~~~~~~~~~~~----------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~ 278 (288)
T cd05061 219 EQPYQGLSNE-------QVLKFVMDGGY----------LDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 278 (288)
T ss_pred CCCCCCCCHH-------HHHHHHHcCCC----------CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence 8888653221 11111111110 011233456899999999999999999999999998763
No 174
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-38 Score=308.27 Aligned_cols=247 Identities=22% Similarity=0.327 Sum_probs=207.7
Q ss_pred CCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeCCC
Q 003504 510 FDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMEN 588 (815)
Q Consensus 510 ~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 588 (815)
|++...+|+|+||.||||.+ ..|+.||||.+.. ..+.+++.+|+.+|++.+.|++|++||.++.....++|||||-.
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV--~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGA 112 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPV--DTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGA 112 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCc--cchHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCC
Confidence 55568999999999999985 5799999998854 34568899999999999999999999999999999999999999
Q ss_pred CChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCce
Q 003504 589 GNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSV 668 (815)
Q Consensus 589 gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NI 668 (815)
|+..+.++.+ .++++......++.+.++||+||| ...-||||||+-||
T Consensus 113 GSiSDI~R~R-----------------------------~K~L~E~EIs~iL~~TLKGL~YLH---~~~KIHRDIKAGNI 160 (502)
T KOG0574|consen 113 GSISDIMRAR-----------------------------RKPLSEQEISAVLRDTLKGLQYLH---DLKKIHRDIKAGNI 160 (502)
T ss_pred CcHHHHHHHh-----------------------------cCCccHHHHHHHHHHHHhHHHHHH---HHHHHHhhcccccE
Confidence 9999999864 456777888899999999999999 67789999999999
Q ss_pred EEcCCCCeeecccccceecCCCC-ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCcccc
Q 003504 669 YLDMNLEPRLSDFGLAKIFGNGL-DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKE 747 (815)
Q Consensus 669 ll~~~~~~kl~Dfgla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~ 747 (815)
|++.+|.+|++|||.|..+.... ...+..||+.|||||++..-. |..++||||+|+...||..|++||.+--+-..-
T Consensus 161 LLNT~G~AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI~EIG--Y~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAI 238 (502)
T KOG0574|consen 161 LLNTDGIAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIEEIG--YDTKADIWSLGITAIEMAEGRPPYSDIHPMRAI 238 (502)
T ss_pred EEcccchhhhhhccccchhhhhHHhhCccccCcccccHHHHHHhc--cchhhhHhhhcchhhhhhcCCCCccccccccee
Confidence 99999999999999998765433 445677999999999998666 789999999999999999999999863321110
Q ss_pred ccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003504 748 GNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGL 807 (815)
Q Consensus 748 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~ 807 (815)
+ --...|.-.-..|+..+.++-++++.|+.+.|++|-++.++++.
T Consensus 239 ----------F-----MIPT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 239 ----------F-----MIPTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred ----------E-----eccCCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence 0 00011222223488899999999999999999999999998764
No 175
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=3e-36 Score=325.29 Aligned_cols=242 Identities=21% Similarity=0.239 Sum_probs=191.2
Q ss_pred CeecccCCeeeEEEEc-CCCcEEEEEEeecCCc---ccHHHHHHHHHHhcCC-CCCCceeeeeEEEeCCeeEEEEEeCCC
Q 003504 514 TLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGST---LTDQEAARELEYLGRI-KHPNLVPLTGYCIAGDQRIAIYDYMEN 588 (815)
Q Consensus 514 ~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ey~~~ 588 (815)
+.||+|+||.||+|.. .+++.||||++..... ...+.+.+|+.++.++ +||||+++++++.+....++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 4799999999999995 5678999999976422 2234577899999888 699999999999999999999999999
Q ss_pred CChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCce
Q 003504 589 GNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSV 668 (815)
Q Consensus 589 gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NI 668 (815)
|+|..++.. ...+++..+..++.|++.||+||| +.+|+||||||+||
T Consensus 81 ~~L~~~~~~------------------------------~~~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Ni 127 (327)
T cd05617 81 GDLMFHMQR------------------------------QRKLPEEHARFYAAEICIALNFLH---ERGIIYRDLKLDNV 127 (327)
T ss_pred CcHHHHHHH------------------------------cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHE
Confidence 999988854 235788899999999999999999 88999999999999
Q ss_pred EEcCCCCeeecccccceecC-CCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCcccc
Q 003504 669 YLDMNLEPRLSDFGLAKIFG-NGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKE 747 (815)
Q Consensus 669 ll~~~~~~kl~Dfgla~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~ 747 (815)
|++.++.+||+|||+++... .........||+.|+|||++.+.. ++.++|||||||++|||++|+.||........
T Consensus 128 li~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DiwslGvil~ell~g~~pf~~~~~~~~- 204 (327)
T cd05617 128 LLDADGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEE--YGFSVDWWALGVLMFEMMAGRSPFDIITDNPD- 204 (327)
T ss_pred EEeCCCCEEEeccccceeccCCCCceecccCCcccCCHHHHCCCC--CCchheeehhHHHHHHHHhCCCCCCccCCCcc-
Confidence 99999999999999998532 222334556999999999987665 68899999999999999999999974322211
Q ss_pred ccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCH
Q 003504 748 GNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSM 801 (815)
Q Consensus 748 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~ 801 (815)
.....+......... . ..+...+..+.+++.+|++.||++||++
T Consensus 205 ~~~~~~~~~~~~~~~--------~--~~p~~~~~~~~~li~~~L~~dP~~R~~~ 248 (327)
T cd05617 205 MNTEDYLFQVILEKP--------I--RIPRFLSVKASHVLKGFLNKDPKERLGC 248 (327)
T ss_pred cccHHHHHHHHHhCC--------C--CCCCCCCHHHHHHHHHHhccCHHHcCCC
Confidence 112222222222111 0 1123345667899999999999999984
No 176
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=1.5e-36 Score=319.27 Aligned_cols=253 Identities=25% Similarity=0.396 Sum_probs=198.9
Q ss_pred HhcCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCcccHHHHHHHHHHhcCC-CCCCceeeeeEEEeC------C
Q 003504 506 ATSNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGSTLTDQEAARELEYLGRI-KHPNLVPLTGYCIAG------D 577 (815)
Q Consensus 506 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~------~ 577 (815)
+++.|+..+.||+|+||.||+|.. .+++.||+|.+... ......+.+|+.++.++ +||||+++++++... .
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~-~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 82 (272)
T cd06637 4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT-GDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD 82 (272)
T ss_pred hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcC-CccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCc
Confidence 566788889999999999999985 46889999998653 34456788999999998 699999999998763 3
Q ss_pred eeEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCC
Q 003504 578 QRIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPP 657 (815)
Q Consensus 578 ~~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ 657 (815)
..++||||+++|+|.+++... ....+++.....++.|++.||+||| +.+
T Consensus 83 ~~~iv~e~~~~~~L~~~l~~~----------------------------~~~~l~~~~~~~~~~qi~~~l~~LH---~~~ 131 (272)
T cd06637 83 QLWLVMEFCGAGSVTDLIKNT----------------------------KGNTLKEEWIAYICREILRGLSHLH---QHK 131 (272)
T ss_pred EEEEEEEcCCCCcHHHHHHhc----------------------------cCCCCCHHHHHHHHHHHHHHHHHHH---HCC
Confidence 578999999999999999752 1235788889999999999999999 789
Q ss_pred eeeccCCCCceEEcCCCCeeecccccceecCCCC-ccccccccccccCCcccCCC---CCCCCCcCcchhHHHHHHHHHh
Q 003504 658 IIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGL-DEEIARGSPGYIPPEFAQPD---SDFPTPKSDVYCYGVVLLELIT 733 (815)
Q Consensus 658 ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~-~~~~~~gt~~y~aPE~~~~~---~~~~~~~~Dv~S~Gvvl~el~t 733 (815)
|+||||||+||++++++.+||+|||+++...... ......|+..|+|||++.+. ...++.++|||||||++|||++
T Consensus 132 ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~ 211 (272)
T cd06637 132 VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAE 211 (272)
T ss_pred CccCCCCHHHEEECCCCCEEEccCCCceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHh
Confidence 9999999999999999999999999998664322 22345689999999998633 1236789999999999999999
Q ss_pred CCCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 734 GKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 734 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
|+.||....+. .... . ..... .+.. .+...+.++.+++.+||..+|.+||++.++++
T Consensus 212 g~~p~~~~~~~------~~~~-~-~~~~~-----~~~~---~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 212 GAPPLCDMHPM------RALF-L-IPRNP-----APRL---KSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred CCCCccccCHH------HHHH-H-HhcCC-----CCCC---CCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 99999643211 1110 0 11111 0111 12234567899999999999999999999975
No 177
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=2.1e-36 Score=320.26 Aligned_cols=250 Identities=22% Similarity=0.232 Sum_probs=198.1
Q ss_pred CCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCc---ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEe
Q 003504 510 FDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGST---LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDY 585 (815)
Q Consensus 510 ~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 585 (815)
|+..+.||+|+||.||+|.. .+++.||+|.+..... .....+.+|++++++++|+||+++.+++..++..++||||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 55678999999999999985 5688999999865322 2234577899999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCC
Q 003504 586 MENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKA 665 (815)
Q Consensus 586 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~ 665 (815)
+++|+|.+++... ....+++.....++.|++.||.||| +.+|+||||||
T Consensus 82 ~~~~~L~~~~~~~----------------------------~~~~~~~~~~~~~~~ql~~~l~~lH---~~~iiH~dikp 130 (285)
T cd05632 82 MNGGDLKFHIYNM----------------------------GNPGFEEERALFYAAEILCGLEDLH---RENTVYRDLKP 130 (285)
T ss_pred ccCccHHHHHHHh----------------------------cCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCCH
Confidence 9999999888642 1235889999999999999999999 89999999999
Q ss_pred CceEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCcc
Q 003504 666 SSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEE 745 (815)
Q Consensus 666 ~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~ 745 (815)
+||++++++.+||+|||++.............|+..|+|||++.+.. ++.++|||||||++||+++|+.||.......
T Consensus 131 ~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~g~~~~~aPE~~~~~~--~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~ 208 (285)
T cd05632 131 ENILLDDYGHIRISDLGLAVKIPEGESIRGRVGTVGYMAPEVLNNQR--YTLSPDYWGLGCLIYEMIEGQSPFRGRKEKV 208 (285)
T ss_pred HHEEECCCCCEEEecCCcceecCCCCcccCCCCCcCccChHHhcCCC--CCcccchHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 99999999999999999998765443334456899999999987655 7889999999999999999999997532211
Q ss_pred ccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCC-----HHHHHH
Q 003504 746 KEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPS-----MQQIVG 806 (815)
Q Consensus 746 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs-----~~~v~~ 806 (815)
.. ..+....... . + ..+...+.++.+++.+|++.||++||+ +.++++
T Consensus 209 ~~---~~~~~~~~~~---~----~----~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05632 209 KR---EEVDRRVLET---E----E----VYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKR 260 (285)
T ss_pred HH---HHHHHhhhcc---c----c----ccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHc
Confidence 11 1111111110 0 0 112334557889999999999999999 666655
No 178
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-37 Score=308.81 Aligned_cols=262 Identities=19% Similarity=0.262 Sum_probs=200.4
Q ss_pred hcCCCCCCeecccCCeeeEEEE-cCCCcEEEEEEeec--CCcccHHHHHHHHHHhcCCCCCCceeeeeEEEe-----CCe
Q 003504 507 TSNFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVH--GSTLTDQEAARELEYLGRIKHPNLVPLTGYCIA-----GDQ 578 (815)
Q Consensus 507 ~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~l~~--~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~-----~~~ 578 (815)
...|...+.||+|+||.|+.|. ..+|..||||.+.. ......+...||+++++.++|+||+.+.+.+.. -..
T Consensus 21 ~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~D 100 (359)
T KOG0660|consen 21 PRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFND 100 (359)
T ss_pred cceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccce
Confidence 3456667899999999999998 46789999999873 344556778899999999999999999998876 247
Q ss_pred eEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCe
Q 003504 579 RIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPI 658 (815)
Q Consensus 579 ~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~i 658 (815)
.|+|+|+|+. +|...++. +..++-....-+..|+.+||.|+| +.++
T Consensus 101 vYiV~elMet-DL~~iik~------------------------------~~~L~d~H~q~f~YQiLrgLKyiH---SAnV 146 (359)
T KOG0660|consen 101 VYLVFELMET-DLHQIIKS------------------------------QQDLTDDHAQYFLYQILRGLKYIH---SANV 146 (359)
T ss_pred eEEehhHHhh-HHHHHHHc------------------------------CccccHHHHHHHHHHHHHhcchhh---cccc
Confidence 8999999965 99999975 234666777789999999999999 8999
Q ss_pred eeccCCCCceEEcCCCCeeecccccceecCC---CCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCC
Q 003504 659 IHRDIKASSVYLDMNLEPRLSDFGLAKIFGN---GLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735 (815)
Q Consensus 659 vHrDlk~~NIll~~~~~~kl~Dfgla~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~ 735 (815)
+||||||+|++++.+..+||+|||+|+.... ....+..+.|.+|.|||++..... |+...||||.||++.||++|+
T Consensus 147 iHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~-Yt~aiDiWSvGCI~AEmL~gk 225 (359)
T KOG0660|consen 147 IHRDLKPSNLLLNADCDLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSE-YTKAIDIWSVGCILAEMLTGK 225 (359)
T ss_pred cccccchhheeeccCCCEEeccccceeeccccCcccchhcceeeeeecCHHHHhcccc-ccchhhhhhhhHHHHHHHcCC
Confidence 9999999999999999999999999998853 223345568999999999876554 799999999999999999999
Q ss_pred CCCCCCCCccccccHH----------------HHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCC
Q 003504 736 KPLGDDYPEEKEGNLV----------------SWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRP 799 (815)
Q Consensus 736 ~p~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP 799 (815)
+-|.+...-..-.-+. ..++.+++..... ....+... .........++..+++..||.+|+
T Consensus 226 plFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~--p~~~f~~~-fp~a~p~AidLlekmL~fdP~kRi 302 (359)
T KOG0660|consen 226 PLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQI--PKQPFSSI-FPNANPLAIDLLEKMLVFDPKKRI 302 (359)
T ss_pred CCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCC--CCCCHHHH-cCCCCHHHHHHHHHHhccCccccC
Confidence 9888742211111110 0112222211100 00000011 123446788999999999999999
Q ss_pred CHHHHHH
Q 003504 800 SMQQIVG 806 (815)
Q Consensus 800 s~~~v~~ 806 (815)
|++|+++
T Consensus 303 ta~eAL~ 309 (359)
T KOG0660|consen 303 TAEEALA 309 (359)
T ss_pred CHHHHhc
Confidence 9999975
No 179
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=1.3e-36 Score=326.46 Aligned_cols=239 Identities=26% Similarity=0.301 Sum_probs=189.2
Q ss_pred CeecccCCeeeEEEEcC-CCcEEEEEEeecCC---cccHHHHHHHHHHhcCC-CCCCceeeeeEEEeCCeeEEEEEeCCC
Q 003504 514 TLLAEGKFGPVYRGFLP-GGIHVAVKVLVHGS---TLTDQEAARELEYLGRI-KHPNLVPLTGYCIAGDQRIAIYDYMEN 588 (815)
Q Consensus 514 ~~ig~G~~g~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ey~~~ 588 (815)
+.||+|+||.||+|+.. +|..||||.++... ......+..|..++... +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 47999999999999964 68899999987532 12334566788877754 899999999999999999999999999
Q ss_pred CChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCce
Q 003504 589 GNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSV 668 (815)
Q Consensus 589 gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NI 668 (815)
|+|..++.. ...+++.....++.|++.||+||| +.+|+||||||+||
T Consensus 81 g~L~~~i~~------------------------------~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivHrDlkp~Ni 127 (316)
T cd05620 81 GDLMFHIQD------------------------------KGRFDLYRATFYAAEIVCGLQFLH---SKGIIYRDLKLDNV 127 (316)
T ss_pred CcHHHHHHH------------------------------cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHe
Confidence 999998864 224677888899999999999999 89999999999999
Q ss_pred EEcCCCCeeecccccceecCCC-CccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCcccc
Q 003504 669 YLDMNLEPRLSDFGLAKIFGNG-LDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKE 747 (815)
Q Consensus 669 ll~~~~~~kl~Dfgla~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~ 747 (815)
+++.++.+||+|||+++..... .......||+.|+|||++.+.. ++.++|||||||++|||++|+.||......
T Consensus 128 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DiwslGvil~el~~g~~Pf~~~~~~--- 202 (316)
T cd05620 128 MLDRDGHIKIADFGMCKENVFGDNRASTFCGTPDYIAPEILQGLK--YTFSVDWWSFGVLLYEMLIGQSPFHGDDED--- 202 (316)
T ss_pred EECCCCCEEeCccCCCeecccCCCceeccCCCcCccCHHHHcCCC--CCcccchhhhHHHHHHHHhCCCCCCCCCHH---
Confidence 9999999999999998754322 2234456899999999998765 789999999999999999999999753221
Q ss_pred ccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHH-HHH
Q 003504 748 GNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQ-QIV 805 (815)
Q Consensus 748 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~-~v~ 805 (815)
......... .+.+ +.....++.+++.+||+.||++||++. +++
T Consensus 203 ----~~~~~~~~~-------~~~~----~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 203 ----ELFESIRVD-------TPHY----PRWITKESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred ----HHHHHHHhC-------CCCC----CCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 111111111 1111 223456788999999999999999984 554
No 180
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=2.4e-36 Score=314.64 Aligned_cols=248 Identities=27% Similarity=0.391 Sum_probs=203.4
Q ss_pred cCCCCCCeecccCCeeeEEEEcCC-CcEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeC
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFLPG-GIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYM 586 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 586 (815)
++|+..+.||+|+||.||+|...+ +..||+|.+..... .+.+.+|++++++++||||+++++++.+....++++||+
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~ 80 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYC 80 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecC
Confidence 578889999999999999999754 78999999865322 678999999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCC
Q 003504 587 ENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKAS 666 (815)
Q Consensus 587 ~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~ 666 (815)
++++|.+++... ...+++.....++.|++.||+||| ..+++||||+|+
T Consensus 81 ~~~~L~~~l~~~-----------------------------~~~l~~~~~~~~~~~l~~~l~~lh---~~~i~H~dl~~~ 128 (256)
T cd06612 81 GAGSVSDIMKIT-----------------------------NKTLTEEEIAAILYQTLKGLEYLH---SNKKIHRDIKAG 128 (256)
T ss_pred CCCcHHHHHHhC-----------------------------ccCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcc
Confidence 999999998642 345789999999999999999999 789999999999
Q ss_pred ceEEcCCCCeeecccccceecCCCC-ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCcc
Q 003504 667 SVYLDMNLEPRLSDFGLAKIFGNGL-DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEE 745 (815)
Q Consensus 667 NIll~~~~~~kl~Dfgla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~ 745 (815)
||+++.++.+||+|||++....... ......|+..|+|||++.+.. ++.++|||||||++|||++|+.||....+..
T Consensus 129 ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~--~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~ 206 (256)
T cd06612 129 NILLNEEGQAKLADFGVSGQLTDTMAKRNTVIGTPFWMAPEVIQEIG--YNNKADIWSLGITAIEMAEGKPPYSDIHPMR 206 (256)
T ss_pred eEEECCCCcEEEcccccchhcccCccccccccCCccccCHHHHhcCC--CCchhhHHHHHHHHHHHHhCCCCCCCcchhh
Confidence 9999999999999999998765433 223345888999999987665 7889999999999999999999997532211
Q ss_pred ccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 746 KEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 746 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
.. .. .... ..+ ....+.....++.+++.+||+.+|++||+++||++
T Consensus 207 ~~-------~~-~~~~-----~~~--~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 207 AI-------FM-IPNK-----PPP--TLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred hh-------hh-hccC-----CCC--CCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 10 00 0000 001 11123345677899999999999999999999985
No 181
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=3e-36 Score=314.15 Aligned_cols=246 Identities=27% Similarity=0.432 Sum_probs=196.2
Q ss_pred CeecccCCeeeEEEEcC--C--CcEEEEEEeecCCc-ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeCCC
Q 003504 514 TLLAEGKFGPVYRGFLP--G--GIHVAVKVLVHGST-LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMEN 588 (815)
Q Consensus 514 ~~ig~G~~g~Vy~~~~~--~--~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 588 (815)
+.||+|+||.||+|... + +..||+|.+..... ...+.+.+|++++++++||||+++++++. .+..++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence 47999999999999742 2 36899999876433 24567899999999999999999999876 4568999999999
Q ss_pred CChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCce
Q 003504 589 GNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSV 668 (815)
Q Consensus 589 gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NI 668 (815)
|+|.+++... ..+++..+..++.|++.||+||| ..+++||||||+||
T Consensus 80 ~~L~~~l~~~------------------------------~~~~~~~~~~~~~qi~~~l~~lh---~~~i~H~di~p~ni 126 (257)
T cd05060 80 GPLLKYLKKR------------------------------REIPVSDLKELAHQVAMGMAYLE---SKHFVHRDLAARNV 126 (257)
T ss_pred CcHHHHHHhC------------------------------CCCCHHHHHHHHHHHHHHHHHHh---hcCeeccCcccceE
Confidence 9999999752 25788999999999999999999 78999999999999
Q ss_pred EEcCCCCeeecccccceecCCCCcc----ccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCC
Q 003504 669 YLDMNLEPRLSDFGLAKIFGNGLDE----EIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GKKPLGDDYP 743 (815)
Q Consensus 669 ll~~~~~~kl~Dfgla~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~ 743 (815)
+++.++.+||+|||+++........ ....++..|+|||.+.... ++.++|||||||++||+++ |+.||.....
T Consensus 127 li~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~Di~slG~~l~~~~~~g~~p~~~~~~ 204 (257)
T cd05060 127 LLVNRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGK--FSSKSDVWSYGVTLWEAFSYGAKPYGEMKG 204 (257)
T ss_pred EEcCCCcEEeccccccceeecCCcccccccCccccccccCHHHhcCCC--CCccchHHHHHHHHHHHHcCCCCCcccCCH
Confidence 9999999999999999876543321 1122356799999887655 7889999999999999998 9999875322
Q ss_pred ccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhhh
Q 003504 744 EEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDIE 812 (815)
Q Consensus 744 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~ 812 (815)
..+..++. ... ....+..++.++.+++.+||..+|++||++.++++.|+++.
T Consensus 205 ----~~~~~~~~----~~~---------~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 205 ----AEVIAMLE----SGE---------RLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred ----HHHHHHHH----cCC---------cCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 12222211 111 01123345568899999999999999999999999999874
No 182
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=1.9e-36 Score=333.05 Aligned_cols=262 Identities=20% Similarity=0.235 Sum_probs=197.4
Q ss_pred CCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCC--cccHHHHHHHHHHhcCCCCCCceeeeeEEEeCC-----eeE
Q 003504 509 NFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGS--TLTDQEAARELEYLGRIKHPNLVPLTGYCIAGD-----QRI 580 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~-----~~~ 580 (815)
+|+..+.||+|+||.||+|.. .+++.||||.+.... ....+.+.+|+++++.++||||+++++++...+ ..+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 477889999999999999995 578999999986432 223457889999999999999999999998766 789
Q ss_pred EEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeee
Q 003504 581 AIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIH 660 (815)
Q Consensus 581 lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivH 660 (815)
+|+||+. ++|.+++.. ...+++.....++.|++.||+||| +.+|+|
T Consensus 81 lv~e~~~-~~l~~~~~~------------------------------~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivH 126 (372)
T cd07853 81 VVTELMQ-SDLHKIIVS------------------------------PQPLSSDHVKVFLYQILRGLKYLH---SAGILH 126 (372)
T ss_pred EEeeccc-cCHHHHHhc------------------------------CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeC
Confidence 9999997 478887753 235788889999999999999999 889999
Q ss_pred ccCCCCceEEcCCCCeeecccccceecCCCC--ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCC
Q 003504 661 RDIKASSVYLDMNLEPRLSDFGLAKIFGNGL--DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738 (815)
Q Consensus 661 rDlk~~NIll~~~~~~kl~Dfgla~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~ 738 (815)
|||||+|||++.++.+||+|||+++...... ......+++.|+|||++.+... ++.++|||||||++|||++|+.||
T Consensus 127 ~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~~DiwslG~il~el~~g~~pf 205 (372)
T cd07853 127 RDIKPGNLLVNSNCVLKICDFGLARVEEPDESKHMTQEVVTQYYRAPEILMGSRH-YTSAVDIWSVGCIFAELLGRRILF 205 (372)
T ss_pred CCCChHHEEECCCCCEEeccccceeecccCccccCCCCCcCCCcCCHHHHcCCCC-CCcHHHHHhHHHHHHHHHcCCCCC
Confidence 9999999999999999999999998654322 2233457899999999876443 688999999999999999999999
Q ss_pred CCCCCccccccHHHH---------------HHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHH
Q 003504 739 GDDYPEEKEGNLVSW---------------VRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQ 803 (815)
Q Consensus 739 ~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~ 803 (815)
....+.+....+.+. ....+..........+.. .........++.+++.+|++.||++||+++|
T Consensus 206 ~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e 284 (372)
T cd07853 206 QAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVL-YTLSSQATHEAVHLLCRMLVFDPDKRISAAD 284 (372)
T ss_pred CCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHh-cccCCCCCHHHHHHHHHhCCCChhhCcCHHH
Confidence 764432211111110 011111100000000000 0011223567889999999999999999999
Q ss_pred HHH
Q 003504 804 IVG 806 (815)
Q Consensus 804 v~~ 806 (815)
+++
T Consensus 285 ~l~ 287 (372)
T cd07853 285 ALA 287 (372)
T ss_pred Hhc
Confidence 986
No 183
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.6e-36 Score=328.45 Aligned_cols=193 Identities=20% Similarity=0.262 Sum_probs=164.6
Q ss_pred HHhcCCCCCCeecccCCeeeEEEEcC-CCcEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEE
Q 003504 505 SATSNFDRGTLLAEGKFGPVYRGFLP-GGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIY 583 (815)
Q Consensus 505 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 583 (815)
....+|.+.+.||+|+||.||+|... ++..||+|..... ....|+.++++++||||+++++++......++|+
T Consensus 63 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 136 (357)
T PHA03209 63 VASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVL 136 (357)
T ss_pred hhhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEE
Confidence 34467999999999999999999964 5678999975332 2356899999999999999999999999999999
Q ss_pred EeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccC
Q 003504 584 DYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDI 663 (815)
Q Consensus 584 ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDl 663 (815)
||+. |+|.+++... ...++|..+..|+.|++.||+||| +.+||||||
T Consensus 137 e~~~-~~l~~~l~~~-----------------------------~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDl 183 (357)
T PHA03209 137 PHYS-SDLYTYLTKR-----------------------------SRPLPIDQALIIEKQILEGLRYLH---AQRIIHRDV 183 (357)
T ss_pred EccC-CcHHHHHHhc-----------------------------cCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCC
Confidence 9995 5888888642 345789999999999999999999 889999999
Q ss_pred CCCceEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCC
Q 003504 664 KASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738 (815)
Q Consensus 664 k~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~ 738 (815)
||+|||++.++.+||+|||+++............||..|+|||++.+.. ++.++|||||||++|||+++..|+
T Consensus 184 kp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 184 KTENIFINDVDQVCIGDLGAAQFPVVAPAFLGLAGTVETNAPEVLARDK--YNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred CHHHEEECCCCCEEEecCccccccccCcccccccccccccCCeecCCCC--CCchhhHHHHHHHHHHHHHcCCcc
Confidence 9999999999999999999998644333334456999999999987765 789999999999999999965554
No 184
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=1.1e-36 Score=328.44 Aligned_cols=236 Identities=25% Similarity=0.289 Sum_probs=186.6
Q ss_pred CeecccCCeeeEEEEc-CCCcEEEEEEeecCCc---ccHHHHHHHHH-HhcCCCCCCceeeeeEEEeCCeeEEEEEeCCC
Q 003504 514 TLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGST---LTDQEAARELE-YLGRIKHPNLVPLTGYCIAGDQRIAIYDYMEN 588 (815)
Q Consensus 514 ~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~---~~~~~~~~E~~-~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 588 (815)
+.||+|+||.||+|+. .+|+.||||++..... .....+.+|.. +++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 4799999999999995 4789999999865321 12234445544 56789999999999999999999999999999
Q ss_pred CChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCce
Q 003504 589 GNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSV 668 (815)
Q Consensus 589 gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NI 668 (815)
|+|..++.. ...+++.....++.|++.||+||| +.+|+||||||+||
T Consensus 81 g~L~~~l~~------------------------------~~~~~~~~~~~~~~qi~~~l~~lH---~~givH~dikp~NI 127 (323)
T cd05575 81 GELFFHLQR------------------------------ERSFPEPRARFYAAEIASALGYLH---SLNIIYRDLKPENI 127 (323)
T ss_pred CCHHHHHHh------------------------------cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHe
Confidence 999999864 234677788899999999999999 88999999999999
Q ss_pred EEcCCCCeeecccccceecCCC-CccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCcccc
Q 003504 669 YLDMNLEPRLSDFGLAKIFGNG-LDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKE 747 (815)
Q Consensus 669 ll~~~~~~kl~Dfgla~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~ 747 (815)
|++.++.+||+|||+++..... .......||+.|+|||++.+.. ++.++|||||||++|||++|+.||.....
T Consensus 128 ll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwslG~il~ell~g~~pf~~~~~---- 201 (323)
T cd05575 128 LLDSQGHVVLTDFGLCKEGIEHSKTTSTFCGTPEYLAPEVLRKQP--YDRTVDWWCLGAVLYEMLYGLPPFYSRDT---- 201 (323)
T ss_pred EECCCCcEEEeccCCCcccccCCCccccccCChhhcChhhhcCCC--CCccccccccchhhhhhhcCCCCCCCCCH----
Confidence 9999999999999998754322 2233456999999999987765 78899999999999999999999975322
Q ss_pred ccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHH
Q 003504 748 GNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQ 802 (815)
Q Consensus 748 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ 802 (815)
........... ..+ +...+.++.+++.+|++.||++||++.
T Consensus 202 ---~~~~~~i~~~~-------~~~----~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 202 ---AEMYDNILNKP-------LRL----KPNISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred ---HHHHHHHHcCC-------CCC----CCCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence 11222222111 011 222356788999999999999999885
No 185
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=1.9e-36 Score=319.48 Aligned_cols=262 Identities=23% Similarity=0.332 Sum_probs=204.5
Q ss_pred hcCCCCCCeecccCCeeeEEEEcC------CCcEEEEEEeecCCc-ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCee
Q 003504 507 TSNFDRGTLLAEGKFGPVYRGFLP------GGIHVAVKVLVHGST-LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQR 579 (815)
Q Consensus 507 ~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 579 (815)
.++|.+.+.||+|+||.||+|... .+..||+|.+..... .....+.+|+.++..++||||++++|++......
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPT 84 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCc
Confidence 357888899999999999999853 246899999865432 3345788999999999999999999999999999
Q ss_pred EEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCee
Q 003504 580 IAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPII 659 (815)
Q Consensus 580 ~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~iv 659 (815)
++||||+++|+|.+++......... ......++|..+..++.|++.||+||| +.+++
T Consensus 85 ~~v~e~~~~~~L~~~l~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~ 141 (277)
T cd05032 85 LVVMELMAKGDLKSYLRSRRPEAEN--------------------NPGLGPPTLQKFIQMAAEIADGMAYLA---AKKFV 141 (277)
T ss_pred EEEEecCCCCCHHHHHHhcccchhh--------------------ccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcc
Confidence 9999999999999999753211000 011335789999999999999999999 89999
Q ss_pred eccCCCCceEEcCCCCeeecccccceecCCCC---ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CC
Q 003504 660 HRDIKASSVYLDMNLEPRLSDFGLAKIFGNGL---DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GK 735 (815)
Q Consensus 660 HrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~ 735 (815)
||||||+||+++.++.+||+|||+++...... ......++..|+|||.+.... ++.++|||||||++||+++ |+
T Consensus 142 H~di~p~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~Di~slG~il~el~t~g~ 219 (277)
T cd05032 142 HRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGV--FTTKSDVWSFGVVLWEMATLAE 219 (277)
T ss_pred ccccChheEEEcCCCCEEECCcccchhhccCcccccCCCCCccccccCHHHHhcCC--CCcccchHHHHHHHHHhhccCC
Confidence 99999999999999999999999998654332 122334678899999887655 6889999999999999998 89
Q ss_pred CCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHh
Q 003504 736 KPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKD 810 (815)
Q Consensus 736 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~ 810 (815)
.||.....+ ....+ ..... ....+..++.++.+++.+||+.+|++||++.++++.|++
T Consensus 220 ~p~~~~~~~----~~~~~----~~~~~---------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (277)
T cd05032 220 QPYQGLSNE----EVLKF----VIDGG---------HLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277 (277)
T ss_pred CCCccCCHH----HHHHH----HhcCC---------CCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence 998643221 11111 11111 001133346789999999999999999999999998863
No 186
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=2.6e-36 Score=348.85 Aligned_cols=266 Identities=21% Similarity=0.260 Sum_probs=203.8
Q ss_pred cCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCc---ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEE
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGST---LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIY 583 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 583 (815)
++|++.+.||+|+||.||+|+. .+++.||||+++.... ...+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 4788899999999999999995 4689999999875322 22457889999999999999999999999999999999
Q ss_pred EeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccC
Q 003504 584 DYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDI 663 (815)
Q Consensus 584 ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDl 663 (815)
||+++|+|.+++....... ... .......++...++++.|+++||+||| +.+|+||||
T Consensus 82 EY~eGGSL~~lL~s~~~~~---------~l~----------e~~~~~lsv~~iL~I~~QIa~AL~yLH---s~GIIHRDL 139 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKE---------SLS----------KELAEKTSVGAFLSIFHKICATIEYVH---SKGVLHRDL 139 (932)
T ss_pred EcCCCCCHHHHHHHhhhcc---------ccc----------hhhhcccCHHHHHHHHHHHHHHHHHHH---HCCccccCC
Confidence 9999999999996421000 000 011234678888999999999999999 889999999
Q ss_pred CCCceEEcCCCCeeecccccceecCCCC-------------------ccccccccccccCCcccCCCCCCCCCcCcchhH
Q 003504 664 KASSVYLDMNLEPRLSDFGLAKIFGNGL-------------------DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCY 724 (815)
Q Consensus 664 k~~NIll~~~~~~kl~Dfgla~~~~~~~-------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~ 724 (815)
||+||+++.++.+||+|||+++...... ......||+.|+|||.+.+.. ++.++|||||
T Consensus 140 KPeNILLd~dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~--~S~kSDIWSL 217 (932)
T PRK13184 140 KPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVP--ASESTDIYAL 217 (932)
T ss_pred chheEEEcCCCCEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCC--CCcHhHHHHH
Confidence 9999999999999999999998662110 011235899999999987766 6899999999
Q ss_pred HHHHHHHHhCCCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCC-CHHH
Q 003504 725 GVVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRP-SMQQ 803 (815)
Q Consensus 725 Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-s~~~ 803 (815)
||++|||++|+.||....... +. . .. ...++.- .....+.+..+.+++.+|++.||++|| ++++
T Consensus 218 GVILyELLTG~~PF~~~~~~k----i~------~-~~---~i~~P~~-~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~ee 282 (932)
T PRK13184 218 GVILYQMLTLSFPYRRKKGRK----IS------Y-RD---VILSPIE-VAPYREIPPFLSQIAMKALAVDPAERYSSVQE 282 (932)
T ss_pred HHHHHHHHHCCCCCCCcchhh----hh------h-hh---hccChhh-ccccccCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 999999999999997522111 10 0 00 0001100 011224456788999999999999996 6777
Q ss_pred HHHHHHhhh
Q 003504 804 IVGLLKDIE 812 (815)
Q Consensus 804 v~~~L~~i~ 812 (815)
+.+.|+...
T Consensus 283 Ll~~Le~~l 291 (932)
T PRK13184 283 LKQDLEPHL 291 (932)
T ss_pred HHHHHHHHH
Confidence 888777653
No 187
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=2.3e-36 Score=314.79 Aligned_cols=249 Identities=23% Similarity=0.403 Sum_probs=201.1
Q ss_pred cCCCCCCeecccCCeeeEEEEcCCCcEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeCC
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYME 587 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 587 (815)
.+|++.+.||+|+||.||+|...++..+|+|.+... ......+.+|++++++++|||++++++++......++|+||++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 82 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREG-AMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFME 82 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCC-CCCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCC
Confidence 467778999999999999999877889999988653 3445679999999999999999999999999999999999999
Q ss_pred CCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCc
Q 003504 588 NGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASS 667 (815)
Q Consensus 588 ~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~N 667 (815)
+|+|.++++.. ...+++.....++.+++.|++||| +.+++||||||+|
T Consensus 83 ~~~L~~~~~~~-----------------------------~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~h~dl~p~n 130 (256)
T cd05112 83 HGCLSDYLRAQ-----------------------------RGKFSQETLLGMCLDVCEGMAYLE---SSNVIHRDLAARN 130 (256)
T ss_pred CCcHHHHHHhC-----------------------------ccCCCHHHHHHHHHHHHHHHHHHH---HCCccccccccce
Confidence 99999998642 234678889999999999999999 7899999999999
Q ss_pred eEEcCCCCeeecccccceecCCCCc--cccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCCc
Q 003504 668 VYLDMNLEPRLSDFGLAKIFGNGLD--EEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GKKPLGDDYPE 744 (815)
Q Consensus 668 Ill~~~~~~kl~Dfgla~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~ 744 (815)
|+++.++.+||+|||.++....... .....++.+|+|||.+.+.. ++.++||||||+++||+++ |+.||......
T Consensus 131 i~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~--~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~ 208 (256)
T cd05112 131 CLVGENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSFSK--YSSKSDVWSFGVLMWEVFSEGKTPYENRSNS 208 (256)
T ss_pred EEEcCCCeEEECCCcceeecccCcccccCCCccchhhcCHhHhccCC--cChHHHHHHHHHHHHHHHcCCCCCCCcCCHH
Confidence 9999999999999999986643221 12223567899999887655 7889999999999999998 99998743221
Q ss_pred cccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 003504 745 EKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLL 808 (815)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L 808 (815)
....... .. .....+. ..+.++.+++.+||+.+|++||++.+++++|
T Consensus 209 -------~~~~~~~-~~--~~~~~~~-------~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 209 -------EVVETIN-AG--FRLYKPR-------LASQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred -------HHHHHHh-CC--CCCCCCC-------CCCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 1111111 11 1111121 2346799999999999999999999999987
No 188
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=1.5e-36 Score=332.38 Aligned_cols=256 Identities=20% Similarity=0.262 Sum_probs=198.7
Q ss_pred HHHhcCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCC---cccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCee
Q 003504 504 LSATSNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGS---TLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQR 579 (815)
Q Consensus 504 ~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 579 (815)
....++|++.+.||+|+||.||+|+. .+++.||+|++.+.. ....+.+.+|+.+++.++||||+++++++.+....
T Consensus 39 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~ 118 (370)
T cd05621 39 QMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYL 118 (370)
T ss_pred CCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEE
Confidence 33456899999999999999999995 468899999986421 22344678899999999999999999999999999
Q ss_pred EEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCee
Q 003504 580 IAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPII 659 (815)
Q Consensus 580 ~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~iv 659 (815)
++||||+++|+|.+++... .++......++.|++.||+||| +.+|+
T Consensus 119 ~lv~Ey~~gg~L~~~l~~~-------------------------------~~~~~~~~~~~~qil~aL~~LH---~~~Iv 164 (370)
T cd05621 119 YMVMEYMPGGDLVNLMSNY-------------------------------DVPEKWAKFYTAEVVLALDAIH---SMGLI 164 (370)
T ss_pred EEEEcCCCCCcHHHHHHhc-------------------------------CCCHHHHHHHHHHHHHHHHHHH---HCCeE
Confidence 9999999999999998642 3566777889999999999999 89999
Q ss_pred eccCCCCceEEcCCCCeeecccccceecCCCC--ccccccccccccCCcccCCCC--CCCCCcCcchhHHHHHHHHHhCC
Q 003504 660 HRDIKASSVYLDMNLEPRLSDFGLAKIFGNGL--DEEIARGSPGYIPPEFAQPDS--DFPTPKSDVYCYGVVLLELITGK 735 (815)
Q Consensus 660 HrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~--~~~~~~gt~~y~aPE~~~~~~--~~~~~~~Dv~S~Gvvl~el~tg~ 735 (815)
||||||+|||++.++.+||+|||+++...... ......||+.|+|||++.... ..++.++||||+||++|||++|+
T Consensus 165 HrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~ 244 (370)
T cd05621 165 HRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGD 244 (370)
T ss_pred ecCCCHHHEEECCCCCEEEEecccceecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCC
Confidence 99999999999999999999999998765332 223456999999999986543 23678999999999999999999
Q ss_pred CCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCC--CCCHHHHHHH
Q 003504 736 KPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLK--RPSMQQIVGL 807 (815)
Q Consensus 736 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~--RPs~~~v~~~ 807 (815)
.||...... ............ +........+..+.+++..|+..+|.+ ||+++++++.
T Consensus 245 ~Pf~~~~~~-------~~~~~i~~~~~~-------~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 245 TPFYADSLV-------GTYSKIMDHKNS-------LNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred CCCCCCCHH-------HHHHHHHhCCcc-------cCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 999753321 112222221110 000111234566778888899755543 8899998764
No 189
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=3e-36 Score=327.51 Aligned_cols=287 Identities=25% Similarity=0.331 Sum_probs=204.0
Q ss_pred hcCCCCCCeecccCCeeeEEEEc------CCCcEEEEEEeecCCcc-cHHHHHHHHHHhcCC-CCCCceeeeeEEEeC-C
Q 003504 507 TSNFDRGTLLAEGKFGPVYRGFL------PGGIHVAVKVLVHGSTL-TDQEAARELEYLGRI-KHPNLVPLTGYCIAG-D 577 (815)
Q Consensus 507 ~~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~-~ 577 (815)
.++|.+.+.||+|+||.||+|.. .+++.||||+++..... ....+.+|+.++.++ +||||++++++|... .
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 85 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC
Confidence 35788999999999999999973 35678999999754322 235688999999999 689999999988764 4
Q ss_pred eeEEEEEeCCCCChhhhhccCCCCCccc-------------------------------cCCCCCccccCCCccc-----
Q 003504 578 QRIAIYDYMENGNLQNLLHDLPLGVQTT-------------------------------EDWSTDTWEEDGTNSI----- 621 (815)
Q Consensus 578 ~~~lv~ey~~~gsL~~~l~~~~~~~~~~-------------------------------~~~~~~~~~~~~~~~~----- 621 (815)
..++||||+++|+|.++++......... ..+....+.+......
T Consensus 86 ~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (343)
T cd05103 86 PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE 165 (343)
T ss_pred ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhh
Confidence 6789999999999999997532110000 0000000000000000
Q ss_pred -cccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCceEEcCCCCeeecccccceecCCCCc---ccccc
Q 003504 622 -QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLD---EEIAR 697 (815)
Q Consensus 622 -~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~~---~~~~~ 697 (815)
.........++|..+.+++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++....... .....
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 242 (343)
T cd05103 166 AEQEDLYKKVLTLEDLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDAR 242 (343)
T ss_pred hhhhhhhhccCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCC
Confidence 000001235789999999999999999999 89999999999999999999999999999986533211 11223
Q ss_pred ccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCC
Q 003504 698 GSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGP 776 (815)
Q Consensus 698 gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 (815)
++..|+|||.+.+.. ++.++||||||+++||+++ |..||......+ .+. ....... .. ..+
T Consensus 243 ~~~~y~aPE~~~~~~--~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~~~----~~~~~~~--~~-------~~~ 304 (343)
T cd05103 243 LPLKWMAPETIFDRV--YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE---EFC----RRLKEGT--RM-------RAP 304 (343)
T ss_pred CCcceECcHHhcCCC--CCchhhHHHHHHHHHHHHHCCCCCCCCccccH---HHH----HHHhccC--CC-------CCC
Confidence 567799999987665 6889999999999999997 999986532111 111 1111111 00 111
Q ss_pred HHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhhhhc
Q 003504 777 EKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDIEST 814 (815)
Q Consensus 777 ~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~~~ 814 (815)
...+.++.+++.+||+.+|++||++.+|++.|+.+.++
T Consensus 305 ~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~~ 342 (343)
T cd05103 305 DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 342 (343)
T ss_pred CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 22345689999999999999999999999999988654
No 190
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=6.9e-37 Score=337.26 Aligned_cols=250 Identities=23% Similarity=0.250 Sum_probs=192.6
Q ss_pred cCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCC---cccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEE
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGS---TLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIY 583 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 583 (815)
++|++.+.||+|+||.||+|+. .+++.||||++.... ......+.+|++++++++||||+++++.+.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 3688899999999999999994 568899999986432 123456789999999999999999999999999999999
Q ss_pred EeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccC
Q 003504 584 DYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDI 663 (815)
Q Consensus 584 ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDl 663 (815)
||+++|+|.+++... ..++......++.|++.||+||| +.+|+||||
T Consensus 81 E~~~~g~L~~~i~~~------------------------------~~~~~~~~~~~~~qi~~al~~lH---~~~ivHrDl 127 (376)
T cd05598 81 DYIPGGDMMSLLIRL------------------------------GIFEEDLARFYIAELTCAIESVH---KMGFIHRDI 127 (376)
T ss_pred eCCCCCcHHHHHHhc------------------------------CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCC
Confidence 999999999999652 23566667788999999999999 899999999
Q ss_pred CCCceEEcCCCCeeecccccceecCCC--------------------------------------------Ccccccccc
Q 003504 664 KASSVYLDMNLEPRLSDFGLAKIFGNG--------------------------------------------LDEEIARGS 699 (815)
Q Consensus 664 k~~NIll~~~~~~kl~Dfgla~~~~~~--------------------------------------------~~~~~~~gt 699 (815)
||+|||++.++.+||+|||+|..+... .......||
T Consensus 128 kp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt 207 (376)
T cd05598 128 KPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGT 207 (376)
T ss_pred CHHHEEECCCCCEEEEeCCCCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCC
Confidence 999999999999999999997532100 001124699
Q ss_pred ccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHH
Q 003504 700 PGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQ 779 (815)
Q Consensus 700 ~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (815)
+.|+|||++.+.. ++.++|||||||++|||++|+.||....+.+.. ....... . ..........
T Consensus 208 ~~y~aPE~~~~~~--~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~-------~~i~~~~--~-----~~~~~~~~~~ 271 (376)
T cd05598 208 PNYIAPEVLLRTG--YTQLCDWWSVGVILYEMLVGQPPFLADTPAETQ-------LKVINWE--T-----TLHIPSQAKL 271 (376)
T ss_pred ccccCHHHHcCCC--CCcceeeeeccceeeehhhCCCCCCCCCHHHHH-------HHHhccC--c-----cccCCCCCCC
Confidence 9999999997766 688999999999999999999999764332211 1111100 0 0111111223
Q ss_pred HHHHHHHHhhccccCCCCCC---CHHHHHHH
Q 003504 780 MEEALKIGYLCTADLPLKRP---SMQQIVGL 807 (815)
Q Consensus 780 ~~~~~~l~~~Cl~~dP~~RP---s~~~v~~~ 807 (815)
+.++.+++.+|+ .+|.+|+ ++.++++.
T Consensus 272 s~~~~~li~~l~-~~p~~R~~~~t~~ell~h 301 (376)
T cd05598 272 SREASDLILRLC-CGAEDRLGKNGADEIKAH 301 (376)
T ss_pred CHHHHHHHHHHh-cCHhhcCCCCCHHHHhCC
Confidence 456677777766 4999999 88888753
No 191
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=1.5e-36 Score=321.42 Aligned_cols=259 Identities=25% Similarity=0.329 Sum_probs=201.4
Q ss_pred CCCCCCeecccCCeeeEEEEc-----CCCcEEEEEEeecCC-cccHHHHHHHHHHhcCCCCCCceeeeeEEEeC--CeeE
Q 003504 509 NFDRGTLLAEGKFGPVYRGFL-----PGGIHVAVKVLVHGS-TLTDQEAARELEYLGRIKHPNLVPLTGYCIAG--DQRI 580 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~-----~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~ 580 (815)
.|++.+.||+|+||.||.|.. .++..||+|.+.... ......+.+|++++++++||||+++++++... ...+
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK 84 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceE
Confidence 467789999999999999973 357889999986543 23346789999999999999999999999875 5678
Q ss_pred EEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeee
Q 003504 581 AIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIH 660 (815)
Q Consensus 581 lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivH 660 (815)
+||||+++|+|.+++... ...++|..+..++.|++.||+||| +.+++|
T Consensus 85 lv~e~~~g~~L~~~l~~~-----------------------------~~~~~~~~~~~i~~~i~~aL~~lH---~~gi~H 132 (284)
T cd05079 85 LIMEFLPSGSLKEYLPRN-----------------------------KNKINLKQQLKYAVQICKGMDYLG---SRQYVH 132 (284)
T ss_pred EEEEccCCCCHHHHHHhc-----------------------------cCCCCHHHHHHHHHHHHHHHHHHH---HCCeee
Confidence 999999999999998642 235789999999999999999999 899999
Q ss_pred ccCCCCceEEcCCCCeeecccccceecCCCCc----cccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCC
Q 003504 661 RDIKASSVYLDMNLEPRLSDFGLAKIFGNGLD----EEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKK 736 (815)
Q Consensus 661 rDlk~~NIll~~~~~~kl~Dfgla~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~ 736 (815)
|||||+||+++.++.+||+|||+++....... .....++..|+|||++.+.. ++.++|||||||++||+++++.
T Consensus 133 ~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~--~~~~~Di~slG~il~ellt~~~ 210 (284)
T cd05079 133 RDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSK--FYIASDVWSFGVTLYELLTYCD 210 (284)
T ss_pred cccchheEEEcCCCCEEECCCccccccccCccceeecCCCCCCccccCHHHhccCC--CCccccchhhhhhhhhhhcCCC
Confidence 99999999999999999999999987653321 12334677899999887655 6889999999999999999887
Q ss_pred CCCCCCC--------ccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 003504 737 PLGDDYP--------EEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLL 808 (815)
Q Consensus 737 p~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L 808 (815)
|+..... .........++... .... ....+..++.++.+++.+||+.+|++||+++++++.|
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l 280 (284)
T cd05079 211 SESSPMTLFLKMIGPTHGQMTVTRLVRVL-EEGK---------RLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGF 280 (284)
T ss_pred CCccccchhhhhcccccccccHHHHHHHH-HcCc---------cCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHH
Confidence 6543111 00111112222111 1110 1111234567899999999999999999999999999
Q ss_pred Hhh
Q 003504 809 KDI 811 (815)
Q Consensus 809 ~~i 811 (815)
+++
T Consensus 281 ~~~ 283 (284)
T cd05079 281 EAI 283 (284)
T ss_pred Hhh
Confidence 876
No 192
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4.6e-36 Score=322.38 Aligned_cols=270 Identities=27% Similarity=0.352 Sum_probs=205.1
Q ss_pred cCCCCCCeecccCCeeeEEEEcC--------CCcEEEEEEeecCCc-ccHHHHHHHHHHhcCC-CCCCceeeeeEEEeCC
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFLP--------GGIHVAVKVLVHGST-LTDQEAARELEYLGRI-KHPNLVPLTGYCIAGD 577 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~~--------~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~ 577 (815)
++|.+.+.||+|+||.||+|+.. ....||+|.++.... .....+.+|++++.++ +||||++++++|....
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEG 91 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCC
Confidence 46788999999999999999742 245799998875322 2345688999999999 6999999999999988
Q ss_pred eeEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCC
Q 003504 578 QRIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPP 657 (815)
Q Consensus 578 ~~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ 657 (815)
..++||||+++|+|.+++........... ... .......++|....+++.|++.||+||| +.+
T Consensus 92 ~~~lv~e~~~~g~L~~~i~~~~~~~~~~~------------~~~--~~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~g 154 (314)
T cd05099 92 PLYVIVEYAAKGNLREFLRARRPPGPDYT------------FDI--TKVPEEQLSFKDLVSCAYQVARGMEYLE---SRR 154 (314)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCccccc------------ccc--cCCcccccCHHHHHHHHHHHHHHHHHHH---HCC
Confidence 99999999999999999976421110000 000 0012346899999999999999999999 899
Q ss_pred eeeccCCCCceEEcCCCCeeecccccceecCCCCc---cccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-
Q 003504 658 IIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLD---EEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT- 733 (815)
Q Consensus 658 ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t- 733 (815)
++||||||+||+++.++.+||+|||+++....... .....++..|+|||.+.... ++.++|||||||++||+++
T Consensus 155 i~H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~DiwslG~~l~el~~~ 232 (314)
T cd05099 155 CIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRV--YTHQSDVWSFGILMWEIFTL 232 (314)
T ss_pred eeeccccceeEEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCC--cCccchhhHHHHHHHHHHhC
Confidence 99999999999999999999999999986643211 11222456799999987655 7889999999999999999
Q ss_pred CCCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhhhh
Q 003504 734 GKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDIES 813 (815)
Q Consensus 734 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~~ 813 (815)
|..||.....++ +. .. ..... ....+..++.++.+++.+||+.+|++||++.++++.|.++..
T Consensus 233 g~~p~~~~~~~~----~~---~~-~~~~~---------~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~ 295 (314)
T cd05099 233 GGSPYPGIPVEE----LF---KL-LREGH---------RMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLA 295 (314)
T ss_pred CCCCCCCCCHHH----HH---HH-HHcCC---------CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence 888986532211 11 11 11111 011133445678899999999999999999999999998864
No 193
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=3e-36 Score=319.85 Aligned_cols=264 Identities=20% Similarity=0.286 Sum_probs=194.9
Q ss_pred CCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCc--ccHHHHHHHHHHhcCC---CCCCceeeeeEEEeC-----C
Q 003504 509 NFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGST--LTDQEAARELEYLGRI---KHPNLVPLTGYCIAG-----D 577 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l---~H~niv~l~g~~~~~-----~ 577 (815)
+|++.+.||+|+||.||+|.. .+++.||+|.++.... .....+.+|+++++++ +||||+++++++... .
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 477889999999999999985 4688999999865321 2234566777777665 699999999988652 3
Q ss_pred eeEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCC
Q 003504 578 QRIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPP 657 (815)
Q Consensus 578 ~~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ 657 (815)
..++||||+++ +|.+++... ....+++.....++.|++.||+||| +.+
T Consensus 81 ~~~lv~e~~~~-~l~~~~~~~----------------------------~~~~~~~~~~~~~~~qi~~al~~lH---~~~ 128 (288)
T cd07863 81 KVTLVFEHVDQ-DLRTYLDKV----------------------------PPPGLPAETIKDLMRQFLRGLDFLH---ANC 128 (288)
T ss_pred eEEEEEccccc-CHHHHHHhc----------------------------CCCCCCHHHHHHHHHHHHHHHHHHH---hCC
Confidence 57899999985 898888652 1234788889999999999999999 889
Q ss_pred eeeccCCCCceEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCC
Q 003504 658 IIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKP 737 (815)
Q Consensus 658 ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p 737 (815)
|+||||||+||+++.++.+||+|||+++............|+..|+|||++.+.. ++.++|||||||++|||++|+.|
T Consensus 129 ivH~dikp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~DiwslG~~l~~l~~g~~~ 206 (288)
T cd07863 129 IVHRDLKPENILVTSGGQVKLADFGLARIYSCQMALTPVVVTLWYRAPEVLLQST--YATPVDMWSVGCIFAEMFRRKPL 206 (288)
T ss_pred eecCCCCHHHEEECCCCCEEECccCccccccCcccCCCccccccccCchHhhCCC--CCCcchhhhHHHHHHHHHhCCcC
Confidence 9999999999999999999999999998775444444556899999999987665 78999999999999999999999
Q ss_pred CCCCCCccccccHHHHHHHHHhcCCCC------cccccccc---CCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 738 LGDDYPEEKEGNLVSWVRGLVRNNKGS------RAIDPKIR---DTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 738 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~---~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
|......+....+..++.......+.. ....+... .......+.++.+++.+|++.||++||++.+++.
T Consensus 207 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 207 FCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred cCCCCHHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 975433222111211110000000000 00000000 0011234567889999999999999999999875
No 194
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=3.6e-36 Score=314.56 Aligned_cols=249 Identities=27% Similarity=0.399 Sum_probs=191.8
Q ss_pred CeecccCCeeeEEEEcC----CCcEEEEEEeecCC-cccHHHHHHHHHHhcCCCCCCceeeeeEEEe-CCeeEEEEEeCC
Q 003504 514 TLLAEGKFGPVYRGFLP----GGIHVAVKVLVHGS-TLTDQEAARELEYLGRIKHPNLVPLTGYCIA-GDQRIAIYDYME 587 (815)
Q Consensus 514 ~~ig~G~~g~Vy~~~~~----~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~-~~~~~lv~ey~~ 587 (815)
+.||+|+||.||+|... +...||+|.+.... ....+.+.+|+.+++.++||||+++++++.. ....++|+||++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 46899999999999853 24579999885422 2334678899999999999999999998764 446789999999
Q ss_pred CCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCc
Q 003504 588 NGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASS 667 (815)
Q Consensus 588 ~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~N 667 (815)
+|+|.++++.. .....+..+..++.|++.||+||| +.+++||||||+|
T Consensus 81 ~~~L~~~~~~~-----------------------------~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlk~~n 128 (262)
T cd05058 81 HGDLRNFIRSE-----------------------------THNPTVKDLIGFGLQVAKGMEYLA---SKKFVHRDLAARN 128 (262)
T ss_pred CCCHHHHHHhc-----------------------------CCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccCcce
Confidence 99999999752 223567778899999999999999 7899999999999
Q ss_pred eEEcCCCCeeecccccceecCCCC-----ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhC-CCCCCCC
Q 003504 668 VYLDMNLEPRLSDFGLAKIFGNGL-----DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITG-KKPLGDD 741 (815)
Q Consensus 668 Ill~~~~~~kl~Dfgla~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg-~~p~~~~ 741 (815)
|+++.++.+||+|||+++...... ......++..|+|||.+.... ++.++|||||||++|||++| ..||...
T Consensus 129 ili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~Di~slG~~l~el~~~~~~~~~~~ 206 (262)
T cd05058 129 CMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQK--FTTKSDVWSFGVLLWELMTRGAPPYPDV 206 (262)
T ss_pred EEEcCCCcEEECCccccccccCCcceeecccccCcCCccccChhHhccCc--cchHHHHHHHHHHHHHHHcCCCCCCCCC
Confidence 999999999999999997653221 112234577899999887655 78899999999999999995 5555432
Q ss_pred CCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhhhh
Q 003504 742 YPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDIES 813 (815)
Q Consensus 742 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~~ 813 (815)
.. ........... ....+...+..+.+++.+||..+|++||++.++++.|+++..
T Consensus 207 ~~-------~~~~~~~~~~~----------~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~ 261 (262)
T cd05058 207 DS-------FDITVYLLQGR----------RLLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS 261 (262)
T ss_pred CH-------HHHHHHHhcCC----------CCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence 11 11112111111 011122345678899999999999999999999999998754
No 195
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=3.4e-36 Score=313.73 Aligned_cols=246 Identities=24% Similarity=0.352 Sum_probs=197.7
Q ss_pred CeecccCCeeeEEEEcCC--C--cEEEEEEeecCCc-ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeCCC
Q 003504 514 TLLAEGKFGPVYRGFLPG--G--IHVAVKVLVHGST-LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMEN 588 (815)
Q Consensus 514 ~~ig~G~~g~Vy~~~~~~--~--~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 588 (815)
+.||+|++|.||+|.+.+ + ..||||.+..... ...+.+.+|+.++++++||||+++++++.. ...++|+||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 468999999999998643 3 3699999977554 445688999999999999999999999988 889999999999
Q ss_pred CChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCce
Q 003504 589 GNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSV 668 (815)
Q Consensus 589 gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NI 668 (815)
|+|.+++.... ...++|.....++.|++.||+||| +.+++||||||+||
T Consensus 80 ~~L~~~l~~~~----------------------------~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~di~p~ni 128 (257)
T cd05040 80 GSLLDRLRKDA----------------------------LGHFLISTLCDYAVQIANGMRYLE---SKRFIHRDLAARNI 128 (257)
T ss_pred CcHHHHHHhcc----------------------------cccCcHHHHHHHHHHHHHHHHHHH---hCCccccccCcccE
Confidence 99999997521 135789999999999999999999 88999999999999
Q ss_pred EEcCCCCeeecccccceecCCCC----ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCC
Q 003504 669 YLDMNLEPRLSDFGLAKIFGNGL----DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GKKPLGDDYP 743 (815)
Q Consensus 669 ll~~~~~~kl~Dfgla~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~ 743 (815)
+++.++.+||+|||+++...... ......++..|+|||.+.... ++.++|||||||++|||++ |+.||.....
T Consensus 129 l~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~--~~~~~Di~slG~~l~el~t~g~~p~~~~~~ 206 (257)
T cd05040 129 LLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRT--FSHASDVWMFGVTLWEMFTYGEEPWAGLSG 206 (257)
T ss_pred EEecCCEEEeccccccccccccccceecccCCCCCceecCHHHhcccC--cCchhhhHHHHHHHHHHHhCCCCCCCCCCH
Confidence 99999999999999998765422 112234678899999887665 7889999999999999999 9999864322
Q ss_pred ccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 003504 744 EEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLK 809 (815)
Q Consensus 744 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~ 809 (815)
.+ +. +...... . ....+...+..+.+++.+||+.+|++||++.++++.|.
T Consensus 207 ~~----~~---~~~~~~~--~-------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 207 SQ----IL---KKIDKEG--E-------RLERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred HH----HH---HHHHhcC--C-------cCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 11 11 1111110 0 01113345678999999999999999999999999885
No 196
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=3.9e-36 Score=315.80 Aligned_cols=255 Identities=24% Similarity=0.344 Sum_probs=202.1
Q ss_pred cCCCCCCeecccCCeeeEEEEcCC----CcEEEEEEeecCC-cccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEE
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFLPG----GIHVAVKVLVHGS-TLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAI 582 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~~~----~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv 582 (815)
.+|.+.+.||+|+||.||+|...+ ...||||...... ....+.+.+|+.++++++||||+++++++.+ +..++|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv 84 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIV 84 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEE
Confidence 457788999999999999998543 3468999886543 3345678999999999999999999998875 457899
Q ss_pred EEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecc
Q 003504 583 YDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRD 662 (815)
Q Consensus 583 ~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrD 662 (815)
|||+++|+|.+++... ...+++..+..++.|++.||+||| +.+++|||
T Consensus 85 ~e~~~~~~L~~~l~~~-----------------------------~~~~~~~~~~~~~~~l~~~l~~lH---~~~~~H~d 132 (270)
T cd05056 85 MELAPLGELRSYLQVN-----------------------------KYSLDLASLILYSYQLSTALAYLE---SKRFVHRD 132 (270)
T ss_pred EEcCCCCcHHHHHHhC-----------------------------CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccc
Confidence 9999999999999642 224789999999999999999999 88999999
Q ss_pred CCCCceEEcCCCCeeecccccceecCCCCc--cccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CCCCCC
Q 003504 663 IKASSVYLDMNLEPRLSDFGLAKIFGNGLD--EEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GKKPLG 739 (815)
Q Consensus 663 lk~~NIll~~~~~~kl~Dfgla~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~ 739 (815)
|||+||+++.++.+||+|||+++....... .....++..|+|||.+.... ++.++||||||+++||+++ |..||.
T Consensus 133 l~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~Di~slG~il~el~~~g~~pf~ 210 (270)
T cd05056 133 IAARNVLVSSPDCVKLGDFGLSRYLEDESYYKASKGKLPIKWMAPESINFRR--FTSASDVWMFGVCMWEILMLGVKPFQ 210 (270)
T ss_pred cChheEEEecCCCeEEccCceeeecccccceecCCCCccccccChhhhccCC--CCchhhhHHHHHHHHHHHHcCCCCCC
Confidence 999999999999999999999987644321 11223456899999886554 6889999999999999996 999997
Q ss_pred CCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhhhhc
Q 003504 740 DDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDIEST 814 (815)
Q Consensus 740 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~~~ 814 (815)
.....+ ...+. ... ... ..+..++.++.+++.+|+..+|++||++.++++.|+++...
T Consensus 211 ~~~~~~----~~~~~----~~~--~~~-------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 211 GVKNND----VIGRI----ENG--ERL-------PMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred CCCHHH----HHHHH----HcC--CcC-------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 533211 11111 111 000 11334566899999999999999999999999999998753
No 197
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=1.3e-36 Score=335.63 Aligned_cols=248 Identities=23% Similarity=0.248 Sum_probs=189.2
Q ss_pred CCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCc---ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEE
Q 003504 509 NFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGST---LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYD 584 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 584 (815)
.|+..+.||+|+||.||+|+. .+++.||||++..... .....+.+|++++++++||||+++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 577889999999999999985 5688999999865322 223467889999999999999999999999999999999
Q ss_pred eCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCC
Q 003504 585 YMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIK 664 (815)
Q Consensus 585 y~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk 664 (815)
|+++|+|.+++... ..++......++.|++.||+||| +.+|||||||
T Consensus 82 ~~~gg~L~~~l~~~------------------------------~~~~e~~~~~~~~qi~~al~~lH---~~~ivHrDlK 128 (382)
T cd05625 82 YIPGGDMMSLLIRM------------------------------GIFPEDLARFYIAELTCAVESVH---KMGFIHRDIK 128 (382)
T ss_pred CCCCCcHHHHHHhc------------------------------CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCC
Confidence 99999999998642 23566667788999999999999 8899999999
Q ss_pred CCceEEcCCCCeeecccccceecCCC------------------------------------------------Cccccc
Q 003504 665 ASSVYLDMNLEPRLSDFGLAKIFGNG------------------------------------------------LDEEIA 696 (815)
Q Consensus 665 ~~NIll~~~~~~kl~Dfgla~~~~~~------------------------------------------------~~~~~~ 696 (815)
|+|||++.++.+||+|||+++..... ......
T Consensus 129 p~NILl~~~g~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (382)
T cd05625 129 PDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSL 208 (382)
T ss_pred HHHEEECCCCCEEEeECCCCccccccccccccccccccccccccccccccccccccccccccchhhhhcccccccccccc
Confidence 99999999999999999997532100 001123
Q ss_pred cccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCC
Q 003504 697 RGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGP 776 (815)
Q Consensus 697 ~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 (815)
.||+.|+|||++.+.. ++.++|||||||++|||++|+.||....+.+.. ....... . .......
T Consensus 209 ~gt~~Y~aPE~~~~~~--~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~-------~~i~~~~--~-----~~~~p~~ 272 (382)
T cd05625 209 VGTPNYIAPEVLLRTG--YTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQ-------MKVINWQ--T-----SLHIPPQ 272 (382)
T ss_pred ccCcccCCHHHhcCCC--CCCeeeEEechHHHHHHHhCCCCCCCCCHHHHH-------HHHHccC--C-----CcCCCCc
Confidence 5899999999987665 789999999999999999999999764332211 1111100 0 0110111
Q ss_pred HHHHHHHHHHHhhccccCCCCCCC---HHHHHH
Q 003504 777 EKQMEEALKIGYLCTADLPLKRPS---MQQIVG 806 (815)
Q Consensus 777 ~~~~~~~~~l~~~Cl~~dP~~RPs---~~~v~~ 806 (815)
...+.+..+++.+++ .+|++|++ +.++++
T Consensus 273 ~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~ 304 (382)
T cd05625 273 AKLSPEASDLIIKLC-RGPEDRLGKNGADEIKA 304 (382)
T ss_pred ccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhc
Confidence 123445666666655 49999997 777654
No 198
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=4.4e-36 Score=317.47 Aligned_cols=250 Identities=22% Similarity=0.326 Sum_probs=198.4
Q ss_pred CCCCCeecccCCeeeEEEEcC-CCcEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeCCC
Q 003504 510 FDRGTLLAEGKFGPVYRGFLP-GGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMEN 588 (815)
Q Consensus 510 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 588 (815)
|++.+.||+|+||.||+|... ++..+|+|.+........+.+.+|+++++.++||||+++++++......++|+||+++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~ 86 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 86 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence 456788999999999999964 5778899998665444556788999999999999999999999999999999999999
Q ss_pred CChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCce
Q 003504 589 GNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSV 668 (815)
Q Consensus 589 gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NI 668 (815)
|+|..++... ...+++..+..++.|++.||+||| +.+++||||||+||
T Consensus 87 ~~l~~~~~~~-----------------------------~~~l~~~~~~~~~~qi~~~L~~LH---~~~i~H~dlkp~ni 134 (282)
T cd06643 87 GAVDAVMLEL-----------------------------ERPLTEPQIRVVCKQTLEALNYLH---ENKIIHRDLKAGNI 134 (282)
T ss_pred CcHHHHHHhc-----------------------------CCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccE
Confidence 9999988642 235789999999999999999999 78999999999999
Q ss_pred EEcCCCCeeecccccceecCCCC-ccccccccccccCCcccCCC---CCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCc
Q 003504 669 YLDMNLEPRLSDFGLAKIFGNGL-DEEIARGSPGYIPPEFAQPD---SDFPTPKSDVYCYGVVLLELITGKKPLGDDYPE 744 (815)
Q Consensus 669 ll~~~~~~kl~Dfgla~~~~~~~-~~~~~~gt~~y~aPE~~~~~---~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~ 744 (815)
+++.++.+||+|||++....... ......|+..|+|||++... ...++.++|||||||++|||++|+.||....+.
T Consensus 135 li~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~ 214 (282)
T cd06643 135 LFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPM 214 (282)
T ss_pred EEccCCCEEEccccccccccccccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHH
Confidence 99999999999999987654322 22334589999999987532 122578999999999999999999998753221
Q ss_pred cccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 745 EKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
+ .+....... .+.. ..+...+.++.+++.+||+.+|++||++.++++
T Consensus 215 ~-------~~~~~~~~~------~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 261 (282)
T cd06643 215 R-------VLLKIAKSE------PPTL--AQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQ 261 (282)
T ss_pred H-------HHHHHhhcC------CCCC--CCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1 111111111 0111 113334567899999999999999999999875
No 199
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=4.8e-36 Score=319.40 Aligned_cols=248 Identities=22% Similarity=0.354 Sum_probs=203.0
Q ss_pred cCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeC
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYM 586 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 586 (815)
.+|+..+.||+|+||.||+|.. .++..||+|.+........+.+.+|+.+++.++||||+++++++...+..++||||+
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 98 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 98 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeeccc
Confidence 5788899999999999999994 578999999997655555677889999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCC
Q 003504 587 ENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKAS 666 (815)
Q Consensus 587 ~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~ 666 (815)
++++|.+++... .+++..+..++.|++.||.||| +.+++||||||+
T Consensus 99 ~~~~L~~~~~~~-------------------------------~~~~~~~~~~~~~l~~~L~~LH---~~~i~H~dL~p~ 144 (297)
T cd06656 99 AGGSLTDVVTET-------------------------------CMDEGQIAAVCRECLQALDFLH---SNQVIHRDIKSD 144 (297)
T ss_pred CCCCHHHHHHhC-------------------------------CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHH
Confidence 999999998641 3577888999999999999999 789999999999
Q ss_pred ceEEcCCCCeeecccccceecCCCCc-cccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCcc
Q 003504 667 SVYLDMNLEPRLSDFGLAKIFGNGLD-EEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEE 745 (815)
Q Consensus 667 NIll~~~~~~kl~Dfgla~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~ 745 (815)
||+++.++.+||+|||++........ .....|++.|+|||.+.+.. ++.++|||||||++|++++|+.||....+..
T Consensus 145 Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~Di~slGvil~~l~tg~~pf~~~~~~~ 222 (297)
T cd06656 145 NILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKA--YGPKVDIWSLGIMAIEMVEGEPPYLNENPLR 222 (297)
T ss_pred HEEECCCCCEEECcCccceEccCCccCcCcccCCccccCHHHHcCCC--CCcHHHHHHHHHHHHHHHhCCCCCCCCCcch
Confidence 99999999999999999987654322 22345888999999987655 6889999999999999999999997533211
Q ss_pred ccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 746 KEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 746 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
.. . .... ........+...+..+.+++.+||..+|++||+++++++
T Consensus 223 ~~---~----~~~~--------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 223 AL---Y----LIAT--------NGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred he---e----eecc--------CCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 10 0 0000 000011123445667889999999999999999999986
No 200
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=4.6e-36 Score=319.29 Aligned_cols=248 Identities=23% Similarity=0.384 Sum_probs=202.4
Q ss_pred cCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeC
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYM 586 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 586 (815)
.+|+..+.||.|+||.||+|.. .+++.||+|.+........+.+.+|+++++.++||||+++++++...+..++|+||+
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 98 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL 98 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence 3577889999999999999984 678999999987655555678899999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCC
Q 003504 587 ENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKAS 666 (815)
Q Consensus 587 ~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~ 666 (815)
++|+|.+++.. ..+++..+..++.|++.||+||| +.+++||||||+
T Consensus 99 ~~~~L~~~~~~-------------------------------~~l~~~~~~~i~~~l~~al~~LH---~~~i~H~dL~p~ 144 (296)
T cd06655 99 AGGSLTDVVTE-------------------------------TCMDEAQIAAVCRECLQALEFLH---ANQVIHRDIKSD 144 (296)
T ss_pred CCCcHHHHHHh-------------------------------cCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHH
Confidence 99999998853 24688999999999999999999 899999999999
Q ss_pred ceEEcCCCCeeecccccceecCCCCc-cccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCcc
Q 003504 667 SVYLDMNLEPRLSDFGLAKIFGNGLD-EEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEE 745 (815)
Q Consensus 667 NIll~~~~~~kl~Dfgla~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~ 745 (815)
||+++.++.+||+|||++........ .....|+..|+|||.+.+.. ++.++|||||||++||+++|+.||....+.+
T Consensus 145 Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~Dv~slGvil~~lltg~~pf~~~~~~~ 222 (296)
T cd06655 145 NVLLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKA--YGPKVDIWSLGIMAIEMVEGEPPYLNENPLR 222 (296)
T ss_pred HEEECCCCCEEEccCccchhcccccccCCCcCCCccccCcchhcCCC--CCchhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 99999999999999999886543322 22345888999999987665 6889999999999999999999997533211
Q ss_pred ccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 746 KEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 746 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
......... . + ....+...+..+.+++.+||..||++||++.++++
T Consensus 223 -------~~~~~~~~~-~-----~--~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 223 -------ALYLIATNG-T-----P--ELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred -------HHHHHHhcC-C-----c--ccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 111111110 0 0 01123345567889999999999999999999975
No 201
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=3.5e-36 Score=319.33 Aligned_cols=274 Identities=26% Similarity=0.395 Sum_probs=206.4
Q ss_pred hcCCCCCCeecccCCeeeEEEEcC------CCcEEEEEEeecCCc-ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCee
Q 003504 507 TSNFDRGTLLAEGKFGPVYRGFLP------GGIHVAVKVLVHGST-LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQR 579 (815)
Q Consensus 507 ~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 579 (815)
.++|+..+.||+|+||.||+|... ++..||+|.+..... .....+.+|+.++++++||||+++++++...+..
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~ 83 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM 83 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence 457888999999999999999853 467899999865432 2345789999999999999999999999999999
Q ss_pred EEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCee
Q 003504 580 IAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPII 659 (815)
Q Consensus 580 ~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~iv 659 (815)
++|+||+++|+|.++++........... .+ .............+++..++.++.|++.||+||| ..+++
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~--~~------~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH---~~~i~ 152 (288)
T cd05050 84 CLLFEYMAYGDLNEFLRHRSPRAQCSLS--HS------TSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLS---ERKFV 152 (288)
T ss_pred EEEEecCCCCCHHHHHHHcCcccccccc--cc------ccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCee
Confidence 9999999999999999754211100000 00 0000011122345789999999999999999999 88999
Q ss_pred eccCCCCceEEcCCCCeeecccccceecCCCC---ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CC
Q 003504 660 HRDIKASSVYLDMNLEPRLSDFGLAKIFGNGL---DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GK 735 (815)
Q Consensus 660 HrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~ 735 (815)
||||||+||++++++.+||+|||+++...... ......++..|+|||.+.+.. ++.++|||||||++|||++ |.
T Consensus 153 H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~Dv~slG~il~el~~~~~ 230 (288)
T cd05050 153 HRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNR--YTTESDVWAYGVVLWEIFSYGM 230 (288)
T ss_pred cccccHhheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCC--CCchhHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999988654322 112223466799999887665 7889999999999999998 88
Q ss_pred CCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHh
Q 003504 736 KPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKD 810 (815)
Q Consensus 736 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~ 810 (815)
.||.+...+ ....... ..... ..+...+.++.+++.+||+.+|++||++.|+++.|++
T Consensus 231 ~p~~~~~~~-------~~~~~~~-~~~~~---------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 231 QPYYGMAHE-------EVIYYVR-DGNVL---------SCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred CCCCCCCHH-------HHHHHHh-cCCCC---------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 888643221 1122111 11110 1133456789999999999999999999999999874
No 202
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-36 Score=321.76 Aligned_cols=251 Identities=25% Similarity=0.316 Sum_probs=212.4
Q ss_pred hcCCCCCCeecccCCeeeEEEEcC-CCcEEEEEEeecCCcc---cHHHHHHHHHHhcCCC-CCCceeeeeEEEeCCeeEE
Q 003504 507 TSNFDRGTLLAEGKFGPVYRGFLP-GGIHVAVKVLVHGSTL---TDQEAARELEYLGRIK-HPNLVPLTGYCIAGDQRIA 581 (815)
Q Consensus 507 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~l 581 (815)
...|++.+.||+|.||.||+++.+ +|+.+|+|.+.+.... ....+.+|+.+|+++. |||||.+.+.+++....++
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~l 113 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYL 113 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEE
Confidence 356888899999999999999965 4999999999775443 3458999999999998 9999999999999999999
Q ss_pred EEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeec
Q 003504 582 IYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHR 661 (815)
Q Consensus 582 v~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHr 661 (815)
|||++.+|.|.+.+... .++......++.|++.++.||| +.+||||
T Consensus 114 vmEL~~GGeLfd~i~~~-------------------------------~~sE~da~~~~~~il~av~~lH---~~gvvHr 159 (382)
T KOG0032|consen 114 VMELCEGGELFDRIVKK-------------------------------HYSERDAAGIIRQILEAVKYLH---SLGVVHR 159 (382)
T ss_pred EEEecCCchHHHHHHHc-------------------------------cCCHHHHHHHHHHHHHHHHHHH---hCCceec
Confidence 99999999999999651 1677788899999999999999 8999999
Q ss_pred cCCCCceEEcCC----CCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCC
Q 003504 662 DIKASSVYLDMN----LEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKP 737 (815)
Q Consensus 662 Dlk~~NIll~~~----~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p 737 (815)
||||+|+|+... +.+|++|||+|.....+......+||+.|+|||++.... ++..+||||.||++|.|+.|..|
T Consensus 160 DlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~~~~~~~~~Gtp~y~APEvl~~~~--y~~~~DiWS~Gvi~yiLL~G~~P 237 (382)
T KOG0032|consen 160 DLKPENLLLASKDEGSGRIKLIDFGLAKFIKPGERLHTIVGTPEYVAPEVLGGRP--YGDEVDVWSIGVILYILLSGVPP 237 (382)
T ss_pred cCCHHHeeeccccCCCCcEEEeeCCCceEccCCceEeeecCCccccCchhhcCCC--CCcccchhHHHHHHHHHhhCCCC
Confidence 999999999643 479999999999988766777889999999999998766 79999999999999999999999
Q ss_pred CCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003504 738 LGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGL 807 (815)
Q Consensus 738 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~ 807 (815)
|.+....+... .....+ ..+........+..+-+++..|+..||.+|+++.++++.
T Consensus 238 F~~~~~~~~~~-------~i~~~~-------~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 238 FWGETEFEIFL-------AILRGD-------FDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred CcCCChhHHHH-------HHHcCC-------CCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 98754332211 112211 133344456678889999999999999999999999873
No 203
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=4.5e-36 Score=312.46 Aligned_cols=249 Identities=22% Similarity=0.302 Sum_probs=200.6
Q ss_pred CCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecC-CcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeC
Q 003504 509 NFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHG-STLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYM 586 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 586 (815)
+|++.+.||+|+||.||+++. .++..+|+|.++.. .....+.+.+|+.++++++||||+++++++.+....++||||+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 477789999999999999995 46889999998643 2334567889999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCC
Q 003504 587 ENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKAS 666 (815)
Q Consensus 587 ~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~ 666 (815)
++|+|.+++... ....++......++.|++.||.||| +.+++|+||||+
T Consensus 81 ~~~~l~~~~~~~----------------------------~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dl~p~ 129 (255)
T cd08219 81 DGGDLMQKIKLQ----------------------------RGKLFPEDTILQWFVQMCLGVQHIH---EKRVLHRDIKSK 129 (255)
T ss_pred CCCcHHHHHHhc----------------------------cCCCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCcc
Confidence 999999988642 1234677888999999999999999 899999999999
Q ss_pred ceEEcCCCCeeecccccceecCCCC-ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCcc
Q 003504 667 SVYLDMNLEPRLSDFGLAKIFGNGL-DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEE 745 (815)
Q Consensus 667 NIll~~~~~~kl~Dfgla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~ 745 (815)
||++++++.++++|||.+....... ......|+..|+|||+..+.. ++.++||||||+++|+|++|+.||.....
T Consensus 130 nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~--~~~~~Dv~slG~i~~~l~~g~~p~~~~~~-- 205 (255)
T cd08219 130 NIFLTQNGKVKLGDFGSARLLTSPGAYACTYVGTPYYVPPEIWENMP--YNNKSDIWSLGCILYELCTLKHPFQANSW-- 205 (255)
T ss_pred eEEECCCCcEEEcccCcceeecccccccccccCCccccCHHHHccCC--cCchhhhhhhchhheehhhccCCCCCCCH--
Confidence 9999999999999999998765322 223345889999999987665 78899999999999999999999975321
Q ss_pred ccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003504 746 KEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGL 807 (815)
Q Consensus 746 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~ 807 (815)
........ .... ...+...+..+.+++.+||+.||++||++.+++..
T Consensus 206 -----~~~~~~~~-~~~~---------~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 206 -----KNLILKVC-QGSY---------KPLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred -----HHHHHHHh-cCCC---------CCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 11111111 1110 01123345678899999999999999999999864
No 204
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=2.7e-36 Score=325.07 Aligned_cols=240 Identities=24% Similarity=0.292 Sum_probs=191.8
Q ss_pred CCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCC---cccHHHHHHHHHHhcCCC-CCCceeeeeEEEeCCeeEEEE
Q 003504 509 NFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGS---TLTDQEAARELEYLGRIK-HPNLVPLTGYCIAGDQRIAIY 583 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lv~ 583 (815)
+|+..+.||+|+||.||+|.. .+|+.||||++.... ....+.+..|..+++.+. |++|+++.+++.+.+..++||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 467789999999999999985 568899999987532 222345778888888885 577888999999889999999
Q ss_pred EeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccC
Q 003504 584 DYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDI 663 (815)
Q Consensus 584 ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDl 663 (815)
||+++|+|.+++.. ...+++.....++.|++.||+||| +.+|+||||
T Consensus 81 Ey~~~g~L~~~i~~------------------------------~~~l~~~~~~~i~~qi~~al~~lH---~~~ivHrDi 127 (323)
T cd05615 81 EYVNGGDLMYHIQQ------------------------------VGKFKEPQAVFYAAEISVGLFFLH---RRGIIYRDL 127 (323)
T ss_pred cCCCCCcHHHHHHH------------------------------cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCC
Confidence 99999999999864 235788899999999999999999 899999999
Q ss_pred CCCceEEcCCCCeeecccccceecCCC-CccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCC
Q 003504 664 KASSVYLDMNLEPRLSDFGLAKIFGNG-LDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDY 742 (815)
Q Consensus 664 k~~NIll~~~~~~kl~Dfgla~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~ 742 (815)
||+|||++.++.+||+|||+++..... .......||+.|+|||++.+.. ++.++|||||||++|||++|+.||....
T Consensus 128 kp~Nill~~~~~ikL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DiwslGvil~elltG~~pf~~~~ 205 (323)
T cd05615 128 KLDNVMLDSEGHIKIADFGMCKEHMVDGVTTRTFCGTPDYIAPEIIAYQP--YGKSVDWWAYGVLLYEMLAGQPPFDGED 205 (323)
T ss_pred CHHHeEECCCCCEEEeccccccccCCCCccccCccCCccccCHHHHcCCC--CCCccchhhhHHHHHHHHhCCCCCCCCC
Confidence 999999999999999999998864322 2233456899999999987665 6889999999999999999999997533
Q ss_pred CccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCH
Q 003504 743 PEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSM 801 (815)
Q Consensus 743 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~ 801 (815)
.. .......... ...+...+.++.+++.+|++.+|.+|++.
T Consensus 206 ~~-------~~~~~i~~~~-----------~~~p~~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 206 ED-------ELFQSIMEHN-----------VSYPKSLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred HH-------HHHHHHHhCC-----------CCCCccCCHHHHHHHHHHcccCHhhCCCC
Confidence 21 1122222111 01123345678899999999999999974
No 205
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=6.1e-36 Score=316.71 Aligned_cols=257 Identities=24% Similarity=0.379 Sum_probs=205.2
Q ss_pred cCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCC-cccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEe
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGS-TLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDY 585 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 585 (815)
++|++.+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|+++++.++||||+++++++......++||||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF 84 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence 4577788999999999999995 468899999886543 23356789999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCC
Q 003504 586 MENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKA 665 (815)
Q Consensus 586 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~ 665 (815)
+++|+|.++++. ...+++.....++.+++.||.|||+ ..+++||||||
T Consensus 85 ~~~~~L~~~~~~------------------------------~~~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p 132 (284)
T cd06620 85 MDCGSLDRIYKK------------------------------GGPIPVEILGKIAVAVVEGLTYLYN--VHRIMHRDIKP 132 (284)
T ss_pred CCCCCHHHHHHh------------------------------ccCCCHHHHHHHHHHHHHHHHHHHH--hcCeeccCCCH
Confidence 999999998864 2347888899999999999999994 35899999999
Q ss_pred CceEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCcc
Q 003504 666 SSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEE 745 (815)
Q Consensus 666 ~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~ 745 (815)
+||+++.++.++|+|||++...... ......|+..|+|||.+.+.. ++.++|||||||++||+++|+.||......+
T Consensus 133 ~nil~~~~~~~~l~d~gl~~~~~~~-~~~~~~~~~~~~aPE~~~~~~--~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~ 209 (284)
T cd06620 133 SNILVNSRGQIKLCDFGVSGELINS-IADTFVGTSTYMSPERIQGGK--YTVKSDVWSLGISIIELALGKFPFAFSNIDD 209 (284)
T ss_pred HHEEECCCCcEEEccCCcccchhhh-ccCccccCcccCCHHHHccCC--CCccchHHHHHHHHHHHHhCCCCCcccchhh
Confidence 9999999999999999998765332 223446899999999987654 7889999999999999999999998644321
Q ss_pred ----ccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 003504 746 ----KEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLL 808 (815)
Q Consensus 746 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L 808 (815)
....+..+........ .+.+ .....+.++.+++.+||+.||++||++.++++..
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~------~~~~---~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~ 267 (284)
T cd06620 210 DGQDDPMGILDLLQQIVQEP------PPRL---PSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMP 267 (284)
T ss_pred hhhhhhhHHHHHHHHHhhcc------CCCC---CchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence 1122333333332211 1111 1223566789999999999999999999999764
No 206
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=5.6e-36 Score=320.66 Aligned_cols=261 Identities=21% Similarity=0.315 Sum_probs=198.4
Q ss_pred cCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCc-ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEe
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGST-LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDY 585 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 585 (815)
++|++.+.||+|+||.||+|.. .++..+|+|.+..... .....+.+|++++.+++||||+++++++.+.+..++||||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey 80 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH 80 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence 3688899999999999999985 4678899998865322 2345688999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCC
Q 003504 586 MENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKA 665 (815)
Q Consensus 586 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~ 665 (815)
+++|+|.++++.. ..+++.....++.|+++||+|||+ ..+++||||||
T Consensus 81 ~~~~~L~~~l~~~------------------------------~~~~~~~~~~~~~~i~~~l~~lH~--~~~i~H~dl~p 128 (308)
T cd06615 81 MDGGSLDQVLKKA------------------------------GRIPENILGKISIAVLRGLTYLRE--KHKIMHRDVKP 128 (308)
T ss_pred cCCCcHHHHHHhc------------------------------CCCCHHHHHHHHHHHHHHHHHHHh--hCCEEECCCCh
Confidence 9999999999652 346778889999999999999993 25899999999
Q ss_pred CceEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCcc
Q 003504 666 SSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEE 745 (815)
Q Consensus 666 ~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~ 745 (815)
+||+++.++.+||+|||++...... ......|+..|+|||.+.+.. ++.++|||||||++||+++|+.||.......
T Consensus 129 ~nil~~~~~~~~l~dfg~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~--~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~ 205 (308)
T cd06615 129 SNILVNSRGEIKLCDFGVSGQLIDS-MANSFVGTRSYMSPERLQGTH--YTVQSDIWSLGLSLVEMAIGRYPIPPPDAKE 205 (308)
T ss_pred HHEEEecCCcEEEccCCCccccccc-ccccCCCCcCccChhHhcCCC--CCccchHHHHHHHHHHHHhCCCCCCCcchhh
Confidence 9999999999999999998765432 223456899999999986655 6889999999999999999999986432111
Q ss_pred ccccHHHHHHHHHhcCCCC------------------------ccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCH
Q 003504 746 KEGNLVSWVRGLVRNNKGS------------------------RAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSM 801 (815)
Q Consensus 746 ~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~ 801 (815)
...+........... .................++.+++.+||..+|++||++
T Consensus 206 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~ 281 (308)
T cd06615 206 ----LEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADL 281 (308)
T ss_pred ----HHHhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCH
Confidence 111110000000000 0000000000011245678999999999999999999
Q ss_pred HHHHHH
Q 003504 802 QQIVGL 807 (815)
Q Consensus 802 ~~v~~~ 807 (815)
++|++.
T Consensus 282 ~~ll~~ 287 (308)
T cd06615 282 KELTKH 287 (308)
T ss_pred HHHhcC
Confidence 999865
No 207
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=1.3e-36 Score=327.96 Aligned_cols=239 Identities=24% Similarity=0.250 Sum_probs=188.0
Q ss_pred CeecccCCeeeEEEEc-CCCcEEEEEEeecCC---cccHHHHHHHHH-HhcCCCCCCceeeeeEEEeCCeeEEEEEeCCC
Q 003504 514 TLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGS---TLTDQEAARELE-YLGRIKHPNLVPLTGYCIAGDQRIAIYDYMEN 588 (815)
Q Consensus 514 ~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~E~~-~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 588 (815)
+.||+|+||.||+|.. .+|+.||||++.... ......+.+|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 4699999999999984 578999999986532 122344555654 56789999999999999999999999999999
Q ss_pred CChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCce
Q 003504 589 GNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSV 668 (815)
Q Consensus 589 gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NI 668 (815)
|+|..++.. ...+++.....++.|++.||+||| +.+|+||||||+||
T Consensus 81 ~~L~~~l~~------------------------------~~~~~~~~~~~~~~qi~~al~~lH---~~givH~Dlkp~NI 127 (325)
T cd05604 81 GELFFHLQR------------------------------ERSFPEPRARFYAAEIASALGYLH---SINIVYRDLKPENI 127 (325)
T ss_pred CCHHHHHHH------------------------------cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHe
Confidence 999988864 235678888999999999999999 89999999999999
Q ss_pred EEcCCCCeeecccccceecCC-CCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCcccc
Q 003504 669 YLDMNLEPRLSDFGLAKIFGN-GLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKE 747 (815)
Q Consensus 669 ll~~~~~~kl~Dfgla~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~ 747 (815)
|++.++.+||+|||+++.... ........||+.|+|||++.+.. ++.++|||||||++|||++|+.||......
T Consensus 128 ll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwslG~il~el~~G~~pf~~~~~~--- 202 (325)
T cd05604 128 LLDSQGHVVLTDFGLCKEGIAQSDTTTTFCGTPEYLAPEVIRKQP--YDNTVDWWCLGAVLYEMLYGLPPFYCRDVA--- 202 (325)
T ss_pred EECCCCCEEEeecCCcccCCCCCCCcccccCChhhCCHHHHcCCC--CCCcCccccccceehhhhcCCCCCCCCCHH---
Confidence 999999999999999875432 22334456999999999987765 688999999999999999999999753221
Q ss_pred ccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHH
Q 003504 748 GNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIV 805 (815)
Q Consensus 748 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~ 805 (815)
...+....... .+ +...+.++.+++.+|++.+|.+||++++.+
T Consensus 203 ----~~~~~~~~~~~-------~~----~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~ 245 (325)
T cd05604 203 ----EMYDNILHKPL-------VL----RPGASLTAWSILEELLEKDRQRRLGAKEDF 245 (325)
T ss_pred ----HHHHHHHcCCc-------cC----CCCCCHHHHHHHHHHhccCHHhcCCCCCCH
Confidence 11222221110 01 112345678999999999999999886433
No 208
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=4.8e-36 Score=321.52 Aligned_cols=265 Identities=20% Similarity=0.285 Sum_probs=198.6
Q ss_pred cCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCc-ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEe
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGST-LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDY 585 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 585 (815)
++|...+.||+|+||.||+|+. .++..||+|.+..... .....+.+|++++++++||||+++++++...+..++||||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 4688889999999999999985 4678899999875332 2344678899999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCC
Q 003504 586 MENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKA 665 (815)
Q Consensus 586 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~ 665 (815)
+++ +|.+++... ...+++.....++.|++.||+||| +.+|+||||||
T Consensus 86 ~~~-~l~~~~~~~-----------------------------~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~dlkp 132 (309)
T cd07872 86 LDK-DLKQYMDDC-----------------------------GNIMSMHNVKIFLYQILRGLAYCH---RRKVLHRDLKP 132 (309)
T ss_pred CCC-CHHHHHHhc-----------------------------CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCH
Confidence 985 888887642 234678888899999999999999 89999999999
Q ss_pred CceEEcCCCCeeecccccceecCCCC-ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCc
Q 003504 666 SSVYLDMNLEPRLSDFGLAKIFGNGL-DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPE 744 (815)
Q Consensus 666 ~NIll~~~~~~kl~Dfgla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~ 744 (815)
+||+++.++.+||+|||+++...... ......++..|+|||.+.+... ++.++|||||||++|||++|+.||......
T Consensus 133 ~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~~DiwslG~il~el~tg~~pf~~~~~~ 211 (309)
T cd07872 133 QNLLINERGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSE-YSTQIDMWGVGCIFFEMASGRPLFPGSTVE 211 (309)
T ss_pred HHEEECCCCCEEECccccceecCCCccccccccccccccCCHHHhCCCC-CCcHHHHHHHHHHHHHHHhCCCCCCCCChH
Confidence 99999999999999999998654322 2233457899999998865432 688999999999999999999999764332
Q ss_pred cccccHHHHH--------HHHHhcCCCCccccccccCC----CCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 745 EKEGNLVSWV--------RGLVRNNKGSRAIDPKIRDT----GPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 745 ~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
+....+.... ............-.+..... .....+.++.+++.+|+..||.+|||++|+++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 212 DELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred HHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 2211111100 00000000000000000000 01234567889999999999999999999986
No 209
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=7.4e-36 Score=311.83 Aligned_cols=253 Identities=28% Similarity=0.421 Sum_probs=202.6
Q ss_pred CeecccCCeeeEEEEcCC----CcEEEEEEeecCCccc-HHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeCCC
Q 003504 514 TLLAEGKFGPVYRGFLPG----GIHVAVKVLVHGSTLT-DQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMEN 588 (815)
Q Consensus 514 ~~ig~G~~g~Vy~~~~~~----~~~vavK~l~~~~~~~-~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 588 (815)
+.||+|+||.||+|...+ +..||+|.+....... .+.+.+|++.+..++|+||+++++++.+....++||||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 479999999999999653 7889999987643332 57889999999999999999999999999999999999999
Q ss_pred CChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCce
Q 003504 589 GNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSV 668 (815)
Q Consensus 589 gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NI 668 (815)
|+|.+++....... .......+++..+.+++.|++.||+||| +.+++||||||+||
T Consensus 81 ~~L~~~l~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~di~p~ni 136 (262)
T cd00192 81 GDLLDYLRKSRPVF---------------------PSPEKSTLSLKDLLSFAIQIAKGMEYLA---SKKFVHRDLAARNC 136 (262)
T ss_pred CcHHHHHhhccccc---------------------cccccccCCHHHHHHHHHHHHHHHHHHH---cCCcccCccCcceE
Confidence 99999997631100 0011356899999999999999999999 89999999999999
Q ss_pred EEcCCCCeeecccccceecCCCC---ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCCc
Q 003504 669 YLDMNLEPRLSDFGLAKIFGNGL---DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GKKPLGDDYPE 744 (815)
Q Consensus 669 ll~~~~~~kl~Dfgla~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~ 744 (815)
+++.++.+||+|||.+....... ......++..|+|||.+.... ++.++||||+|+++||+++ |..||......
T Consensus 137 li~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~Di~slG~il~~l~~~g~~p~~~~~~~ 214 (262)
T cd00192 137 LVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGI--FTSKSDVWSFGVLLWEIFTLGATPYPGLSNE 214 (262)
T ss_pred EECCCCcEEEcccccccccccccccccccCCCcCccccCHHHhccCC--cchhhccHHHHHHHHHHHhcCCCCCCCCCHH
Confidence 99999999999999998775432 223345788999999887664 7899999999999999999 69998754221
Q ss_pred cccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 003504 745 EKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLK 809 (815)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~ 809 (815)
.+ ....... .....+...+.++.+++.+||..+|++||++.|+++.|+
T Consensus 215 ----~~---~~~~~~~----------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 215 ----EV---LEYLRKG----------YRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred ----HH---HHHHHcC----------CCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 11 1111111 111123445678999999999999999999999999874
No 210
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=9.7e-36 Score=316.52 Aligned_cols=252 Identities=25% Similarity=0.335 Sum_probs=201.5
Q ss_pred cCCCCCCeecccCCeeeEEEEcC-CCcEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeC
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFLP-GGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYM 586 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 586 (815)
+.|++.+.||+|+||.||+|+.. ++..||+|.+........+.+.+|+++++.++||||+++++++......++||||+
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 91 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFC 91 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecC
Confidence 56888899999999999999964 58899999987655555677889999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCC
Q 003504 587 ENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKAS 666 (815)
Q Consensus 587 ~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~ 666 (815)
++++|..++.+. ...+++..+..++.|++.||+||| +.+++||||||+
T Consensus 92 ~~~~l~~~~~~~-----------------------------~~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~ 139 (292)
T cd06644 92 PGGAVDAIMLEL-----------------------------DRGLTEPQIQVICRQMLEALQYLH---SMKIIHRDLKAG 139 (292)
T ss_pred CCCcHHHHHHhh-----------------------------cCCCCHHHHHHHHHHHHHHHHHHh---cCCeeecCCCcc
Confidence 999999887642 235788999999999999999999 889999999999
Q ss_pred ceEEcCCCCeeecccccceecCCCC-ccccccccccccCCcccCCCC---CCCCCcCcchhHHHHHHHHHhCCCCCCCCC
Q 003504 667 SVYLDMNLEPRLSDFGLAKIFGNGL-DEEIARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELITGKKPLGDDY 742 (815)
Q Consensus 667 NIll~~~~~~kl~Dfgla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~---~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~ 742 (815)
||+++.++.+||+|||++....... ......++..|+|||++.+.. ..++.++|||||||++|||++|+.||....
T Consensus 140 Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~ 219 (292)
T cd06644 140 NVLLTLDGDIKLADFGVSAKNVKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELN 219 (292)
T ss_pred eEEEcCCCCEEEccCccceeccccccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCcccc
Confidence 9999999999999999987643322 223445888999999885321 225779999999999999999999987532
Q ss_pred CccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 743 PEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 743 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
+. .......... .+.. ..+...+.++.+++.+||..+|++||+++++++
T Consensus 220 ~~-------~~~~~~~~~~------~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 220 PM-------RVLLKIAKSE------PPTL--SQPSKWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred HH-------HHHHHHhcCC------CccC--CCCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 21 1111111110 1111 113345567899999999999999999999975
No 211
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=6.5e-36 Score=315.70 Aligned_cols=254 Identities=25% Similarity=0.377 Sum_probs=201.3
Q ss_pred cCCCCCCeecccCCeeeEEEEcC-CC----cEEEEEEeecCCc-ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEE
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFLP-GG----IHVAVKVLVHGST-LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIA 581 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~~-~~----~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 581 (815)
.+|+..+.||+|+||.||+|... +| ..||+|.+..... .....+.+|+.++++++||||++++++|.. ...++
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~ 85 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL 85 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence 46778899999999999999853 23 2589998865433 234678899999999999999999999987 78899
Q ss_pred EEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeec
Q 003504 582 IYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHR 661 (815)
Q Consensus 582 v~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHr 661 (815)
|+||+++|+|.++++.. ...+++.....++.|++.||+||| +.+++||
T Consensus 86 v~e~~~~g~L~~~l~~~-----------------------------~~~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~ 133 (279)
T cd05057 86 ITQLMPLGCLLDYVRNH-----------------------------KDNIGSQYLLNWCVQIAKGMSYLE---EKRLVHR 133 (279)
T ss_pred EEecCCCCcHHHHHHhc-----------------------------cCCCCHHHHHHHHHHHHHHHHHHH---hCCEEec
Confidence 99999999999999752 234788999999999999999999 7999999
Q ss_pred cCCCCceEEcCCCCeeecccccceecCCCCccc---cccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CCCC
Q 003504 662 DIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEE---IARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GKKP 737 (815)
Q Consensus 662 Dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p 737 (815)
||||+||++++++.+||+|||+++......... ...++..|+|||.+.... ++.++||||||+++||+++ |+.|
T Consensus 134 di~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~--~~~~~Di~slG~~l~el~~~g~~p 211 (279)
T cd05057 134 DLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRI--YTHKSDVWSYGVTVWELMTFGAKP 211 (279)
T ss_pred ccCcceEEEcCCCeEEECCCcccccccCcccceecCCCcccccccCHHHhhcCC--cCchhhHHHHHHHHHHHhcCCCCC
Confidence 999999999999999999999998765433211 122356799999886554 6889999999999999999 9999
Q ss_pred CCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhhhh
Q 003504 738 LGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDIES 813 (815)
Q Consensus 738 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~~ 813 (815)
|.....++ +. .... ... . ...+..+...+.+++.+||..+|++||++.++++.|+++..
T Consensus 212 ~~~~~~~~----~~---~~~~-~~~--~-------~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05057 212 YEGIPAVE----IP---DLLE-KGE--R-------LPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMAR 270 (279)
T ss_pred CCCCCHHH----HH---HHHh-CCC--C-------CCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 97533211 11 1111 110 0 01122344578899999999999999999999999998743
No 212
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=1.9e-36 Score=315.85 Aligned_cols=241 Identities=24% Similarity=0.361 Sum_probs=189.4
Q ss_pred CeecccCCeeeEEEEcCC--------CcEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEe
Q 003504 514 TLLAEGKFGPVYRGFLPG--------GIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDY 585 (815)
Q Consensus 514 ~~ig~G~~g~Vy~~~~~~--------~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 585 (815)
+.||+|+||.||+|.... ..+||+|.+........+.+.+|+.+++.++||||+++++++..++..++||||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 469999999999998532 234888987654444456788999999999999999999999998999999999
Q ss_pred CCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCC
Q 003504 586 MENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKA 665 (815)
Q Consensus 586 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~ 665 (815)
+++|+|.++++.. ...+++..+++++.|++.||+||| +.+|+||||||
T Consensus 81 ~~~g~L~~~l~~~-----------------------------~~~~~~~~~~~~~~qi~~~l~~lH---~~~iiH~dlkp 128 (258)
T cd05078 81 VKFGSLDTYLKKN-----------------------------KNLINISWKLEVAKQLAWALHFLE---DKGLTHGNVCA 128 (258)
T ss_pred CCCCcHHHHHhcC-----------------------------CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCcc
Confidence 9999999999752 225788889999999999999999 89999999999
Q ss_pred CceEEcCCCC--------eeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCC-C
Q 003504 666 SSVYLDMNLE--------PRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK-K 736 (815)
Q Consensus 666 ~NIll~~~~~--------~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~-~ 736 (815)
+||+++.++. ++++|||++...... ....++..|+|||++..... ++.++|||||||++||+++|. .
T Consensus 129 ~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~~---~~~~~~~~y~aPE~~~~~~~-~~~~~DiwslG~~l~~l~~g~~~ 204 (258)
T cd05078 129 KNVLLIREEDRKTGNPPFIKLSDPGISITVLPK---EILLERIPWVPPECIENPQN-LSLAADKWSFGTTLWEIFSGGDK 204 (258)
T ss_pred ceEEEecccccccCCCceEEecccccccccCCc---hhccccCCccCchhccCCCC-CCchhhHHHHHHHHHHHHcCCCC
Confidence 9999987765 599999988765432 23457889999999875432 588999999999999999985 5
Q ss_pred CCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 003504 737 PLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLK 809 (815)
Q Consensus 737 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~ 809 (815)
||....+.. ... ..... . ..+.....++.+++.+||+.+|++||+++++++.|+
T Consensus 205 ~~~~~~~~~-------~~~-~~~~~-------~----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 205 PLSALDSQK-------KLQ-FYEDR-------H----QLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred ChhhccHHH-------HHH-HHHcc-------c----cCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 554321111 011 11110 0 112223457899999999999999999999999874
No 213
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=1.2e-35 Score=314.56 Aligned_cols=261 Identities=26% Similarity=0.363 Sum_probs=204.8
Q ss_pred cCCCCCCeecccCCeeeEEEEcC-----CCcEEEEEEeecCCcc-cHHHHHHHHHHhcCCCCCCceeeeeEEEe--CCee
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFLP-----GGIHVAVKVLVHGSTL-TDQEAARELEYLGRIKHPNLVPLTGYCIA--GDQR 579 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~~-----~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~g~~~~--~~~~ 579 (815)
.+|...+.||+|+||.||+|+.. ++..||||.+...... ..+.+.+|++++++++||||+++++++.. ....
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 35677789999999999999853 3678999999764433 46689999999999999999999999887 5578
Q ss_pred EEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCee
Q 003504 580 IAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPII 659 (815)
Q Consensus 580 ~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~iv 659 (815)
++||||+++|+|.++++.. ...++|..+..++.|++.||+||| +.+++
T Consensus 84 ~lv~e~~~~~~l~~~l~~~-----------------------------~~~~~~~~~~~~~~~l~~aL~~lH---~~~i~ 131 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQRH-----------------------------RDQINLKRLLLFSSQICKGMDYLG---SQRYI 131 (284)
T ss_pred EEEEecCCCCCHHHHHHhC-----------------------------ccccCHHHHHHHHHHHHHHHHHHH---hCCee
Confidence 9999999999999999752 225789999999999999999999 78999
Q ss_pred eccCCCCceEEcCCCCeeecccccceecCCCCcc----ccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCC
Q 003504 660 HRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDE----EIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735 (815)
Q Consensus 660 HrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~ 735 (815)
||||||+||+++.++.+||+|||.+......... ....++..|+|||...... ++.++||||||+++|||++|+
T Consensus 132 H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~--~~~~~Di~slG~~l~el~tg~ 209 (284)
T cd05038 132 HRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSK--FSSASDVWSFGVTLYELFTYG 209 (284)
T ss_pred cCCCCHHhEEEcCCCCEEEcccccccccccCCcceeccCCCCCcccccCcHHHccCC--CCcccchHHHhhhhheeeccC
Confidence 9999999999999999999999999876532211 1223456799999887665 688999999999999999999
Q ss_pred CCCCCCCCcccc--------ccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003504 736 KPLGDDYPEEKE--------GNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGL 807 (815)
Q Consensus 736 ~p~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~ 807 (815)
.|+......... .....+.. ..... .....+..++.++.+++.+||+.+|++||+|.+|+++
T Consensus 210 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---------~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 279 (284)
T cd05038 210 DPSQSPPAEFLRMIGIAQGQMIVTRLLE-LLKEG---------ERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILI 279 (284)
T ss_pred CCcccccchhccccccccccccHHHHHH-HHHcC---------CcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence 998653221100 01111111 11111 1111233455789999999999999999999999999
Q ss_pred HHhhh
Q 003504 808 LKDIE 812 (815)
Q Consensus 808 L~~i~ 812 (815)
|+++.
T Consensus 280 l~~i~ 284 (284)
T cd05038 280 VDRLR 284 (284)
T ss_pred HhhcC
Confidence 99863
No 214
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=6.3e-36 Score=310.55 Aligned_cols=245 Identities=27% Similarity=0.411 Sum_probs=197.9
Q ss_pred CeecccCCeeeEEEEcCCCcEEEEEEeecCCcc-cHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeCCCCChh
Q 003504 514 TLLAEGKFGPVYRGFLPGGIHVAVKVLVHGSTL-TDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQ 592 (815)
Q Consensus 514 ~~ig~G~~g~Vy~~~~~~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL~ 592 (815)
+.||+|+||.||+|...+++.||+|.+...... ....+.+|++++++++||||+++++++.+....++||||+++++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 468999999999999877999999998764433 4567899999999999999999999999999999999999999999
Q ss_pred hhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCceEEcC
Q 003504 593 NLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDM 672 (815)
Q Consensus 593 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NIll~~ 672 (815)
++++.. ...+++.....++.+++.||+||| +.+++||||||+||+++.
T Consensus 81 ~~l~~~-----------------------------~~~~~~~~~~~~~~~~~~~l~~lH---~~~i~h~di~p~nili~~ 128 (251)
T cd05041 81 TFLRKK-----------------------------KNRLTVKKLLQMSLDAAAGMEYLE---SKNCIHRDLAARNCLVGE 128 (251)
T ss_pred HHHHhc-----------------------------CCCCCHHHHHHHHHHHHHHHHHHH---hCCEehhhcCcceEEEcC
Confidence 999652 224678889999999999999999 889999999999999999
Q ss_pred CCCeeecccccceecCCCCc---cccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCCccccc
Q 003504 673 NLEPRLSDFGLAKIFGNGLD---EEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GKKPLGDDYPEEKEG 748 (815)
Q Consensus 673 ~~~~kl~Dfgla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~~~~~ 748 (815)
++.+||+|||+++....... .....++..|+|||.+.+.. ++.++|||||||++||+++ |..||.......
T Consensus 129 ~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~--~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~--- 203 (251)
T cd05041 129 NNVLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNYGR--YTSESDVWSYGILLWETFSLGDTPYPGMSNQQ--- 203 (251)
T ss_pred CCcEEEeeccccccccCCcceeccccCcceeccCChHhhccCC--CCcchhHHHHHHHHHHHHhccCCCCccCCHHH---
Confidence 99999999999986543221 11222456799999987655 7899999999999999999 888886532211
Q ss_pred cHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 003504 749 NLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLK 809 (815)
Q Consensus 749 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~ 809 (815)
... . .... .....+...+.++.+++.+||..+|++||++.++++.|+
T Consensus 204 -~~~---~-~~~~---------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 204 -TRE---R-IESG---------YRMPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred -HHH---H-HhcC---------CCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 111 1 1110 011123445678999999999999999999999999886
No 215
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.2e-35 Score=325.36 Aligned_cols=263 Identities=22% Similarity=0.217 Sum_probs=196.0
Q ss_pred hcCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCC--cccHHHHHHHHHHhcCCCCCCceeeeeEEEeCC------
Q 003504 507 TSNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGS--TLTDQEAARELEYLGRIKHPNLVPLTGYCIAGD------ 577 (815)
Q Consensus 507 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~------ 577 (815)
.++|+..+.||+|+||.||+|.. .+|..||||.+.... ......+.+|+.+++.++||||+++++++....
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 99 (359)
T cd07876 20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQ 99 (359)
T ss_pred hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccc
Confidence 46899999999999999999985 568899999986432 233456789999999999999999999986543
Q ss_pred eeEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCC
Q 003504 578 QRIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPP 657 (815)
Q Consensus 578 ~~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ 657 (815)
..++||||+++ +|...++. .+++.....++.|++.||+||| +.+
T Consensus 100 ~~~lv~e~~~~-~l~~~~~~--------------------------------~~~~~~~~~~~~qi~~~L~~LH---~~~ 143 (359)
T cd07876 100 DVYLVMELMDA-NLCQVIHM--------------------------------ELDHERMSYLLYQMLCGIKHLH---SAG 143 (359)
T ss_pred eeEEEEeCCCc-CHHHHHhc--------------------------------cCCHHHHHHHHHHHHHHHHHHH---hCC
Confidence 46899999976 56666542 2566777889999999999999 899
Q ss_pred eeeccCCCCceEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCC
Q 003504 658 IIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKP 737 (815)
Q Consensus 658 ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p 737 (815)
|+||||||+||+++.++.+||+|||+++............||+.|+|||.+.+.. ++.++|||||||++|||++|+.|
T Consensus 144 ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~--~~~~~DiwSlG~il~el~tg~~p 221 (359)
T cd07876 144 IIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMG--YKENVDIWSVGCIMGELVKGSVI 221 (359)
T ss_pred cccCCCCHHHEEECCCCCEEEecCCCccccccCccCCCCcccCCCCCchhccCCC--CCcchhhHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999998655444444556899999999987765 78899999999999999999999
Q ss_pred CCCCCCcccccc---------------HHHHHHHHHhcCCCCc------ccccccc---CCCCHHHHHHHHHHHhhcccc
Q 003504 738 LGDDYPEEKEGN---------------LVSWVRGLVRNNKGSR------AIDPKIR---DTGPEKQMEEALKIGYLCTAD 793 (815)
Q Consensus 738 ~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~------~~~~~~~---~~~~~~~~~~~~~l~~~Cl~~ 793 (815)
|......+.... +...+........... ....... .........++.+++.+|+..
T Consensus 222 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~ 301 (359)
T cd07876 222 FQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVI 301 (359)
T ss_pred CCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhcc
Confidence 976432111000 0001111111110000 0000000 000112346788999999999
Q ss_pred CCCCCCCHHHHHHH
Q 003504 794 LPLKRPSMQQIVGL 807 (815)
Q Consensus 794 dP~~RPs~~~v~~~ 807 (815)
||++|||+.|+++.
T Consensus 302 dP~~R~t~~e~l~h 315 (359)
T cd07876 302 DPDKRISVDEALRH 315 (359)
T ss_pred CcccCCCHHHHhcC
Confidence 99999999999863
No 216
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=2.8e-36 Score=325.49 Aligned_cols=239 Identities=24% Similarity=0.260 Sum_probs=185.8
Q ss_pred CeecccCCeeeEEEEc-CCCcEEEEEEeecCCc---ccHHHHHHHH-HHhcCCCCCCceeeeeEEEeCCeeEEEEEeCCC
Q 003504 514 TLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGST---LTDQEAAREL-EYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMEN 588 (815)
Q Consensus 514 ~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~---~~~~~~~~E~-~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 588 (815)
+.||+|+||.||+|+. .+++.||+|++..... .....+.+|. .+++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 4799999999999995 4678899999865321 1223344444 456788999999999999999999999999999
Q ss_pred CChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCce
Q 003504 589 GNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSV 668 (815)
Q Consensus 589 gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NI 668 (815)
|+|.+++... ..+.......++.|++.||+||| +.+|+||||||+||
T Consensus 81 ~~L~~~~~~~------------------------------~~~~~~~~~~~~~qi~~~L~~lH---~~giiHrDlkp~Ni 127 (325)
T cd05602 81 GELFYHLQRE------------------------------RCFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENI 127 (325)
T ss_pred CcHHHHHHhc------------------------------CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHe
Confidence 9999998642 23455666779999999999999 89999999999999
Q ss_pred EEcCCCCeeecccccceecCC-CCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCcccc
Q 003504 669 YLDMNLEPRLSDFGLAKIFGN-GLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKE 747 (815)
Q Consensus 669 ll~~~~~~kl~Dfgla~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~ 747 (815)
|++.++.+||+|||+++.... ........||+.|+|||++.+.. ++.++|||||||++|||++|+.||......
T Consensus 128 li~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DiwslG~il~el~~g~~pf~~~~~~--- 202 (325)
T cd05602 128 LLDSQGHIVLTDFGLCKENIEHNGTTSTFCGTPEYLAPEVLHKQP--YDRTVDWWCLGAVLYEMLYGLPPFYSRNTA--- 202 (325)
T ss_pred EECCCCCEEEccCCCCcccccCCCCcccccCCccccCHHHHcCCC--CCCccccccccHHHHHHhcCCCCCCCCCHH---
Confidence 999999999999999975432 22234456999999999988765 788999999999999999999999753321
Q ss_pred ccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHH
Q 003504 748 GNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIV 805 (815)
Q Consensus 748 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~ 805 (815)
.......... . ..+...+..+.+++.+|++.||.+||++.+.+
T Consensus 203 ----~~~~~i~~~~-------~----~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~ 245 (325)
T cd05602 203 ----EMYDNILNKP-------L----QLKPNITNSARHLLEGLLQKDRTKRLGAKDDF 245 (325)
T ss_pred ----HHHHHHHhCC-------c----CCCCCCCHHHHHHHHHHcccCHHHCCCCCCCH
Confidence 1112222110 0 01223456788999999999999999877543
No 217
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=1e-37 Score=326.28 Aligned_cols=340 Identities=24% Similarity=0.318 Sum_probs=299.6
Q ss_pred eEEEEecCCCCCc--------cCCCcccccCCCCCCEEECcCCCCCCCCcc-cCCCCCCCEEEccCCcCCccCCccccCC
Q 003504 29 HVTDFLASNSGLS--------GSVPDTTIGKLSKLQSLDLSENNITALPSD-LWSLGSLKSLNLSYNRISGSLPSNIGNF 99 (815)
Q Consensus 29 ~~~~l~~~~~~~~--------g~~~~~~~~~l~~L~~L~Ls~n~l~~lp~~-~~~l~~L~~L~L~~N~i~~~~~~~~~~l 99 (815)
....|+++...+. |.+|+ .-+.||||+|.|+.+... +.++++|++++|.+|.++ .+|...+-.
T Consensus 53 ~~~lldcs~~~lea~~~~~l~g~lp~-------~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~s 124 (873)
T KOG4194|consen 53 NTRLLDCSDRELEAIDKSRLKGFLPS-------QTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHES 124 (873)
T ss_pred CceeeecCccccccccccccCCcCcc-------ceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccc
Confidence 4556778877653 33343 447899999999988554 557999999999999998 788777777
Q ss_pred CCCcEEEccCCcCCCCChhhhcCCcCCCEEEcCCCcccccCCcccccccccceeeccCCcCCCCCCchhhccCCCCCEEE
Q 003504 100 GLLEVFDLSNNNFSGEIPAAISSLVSLRVLKLDGNMFQWSIPPGLLNCQSLVTVDLSMNQLNGSLPDGFGAAFPKLKSLN 179 (815)
Q Consensus 100 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ 179 (815)
.+|+.|+|.+|.|+.+..+++..++.|+.||||.|.|+.+.-..|..-.++++|+|++|+|+ .+..+.|..+.+|..|.
T Consensus 125 ghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It-~l~~~~F~~lnsL~tlk 203 (873)
T KOG4194|consen 125 GHLEKLDLRHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRIT-TLETGHFDSLNSLLTLK 203 (873)
T ss_pred cceeEEeeeccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeecccccc-ccccccccccchheeee
Confidence 78999999999999999999999999999999999999766678888889999999999998 88888889999999999
Q ss_pred cCCCcccCCCC-CCCCCCCCCeEeccCCcCCCcchhhh--hcccceeeeccccccCcccccccccccCCccceEEEcCCC
Q 003504 180 LAGNEIKGRDT-HFAGLKSITNLNISGNLFQGSVMGVF--LESLEVIDLRSNQFQGHISQVQFNSSYNWSRLVYVDLSEN 256 (815)
Q Consensus 180 L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~--l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N 256 (815)
|+.|+|+.+|. .|..|++|+.|+|..|.|..+....| +++|+.|.|..|.+. .+....|+.+.+++.|+|..|
T Consensus 204 LsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~----kL~DG~Fy~l~kme~l~L~~N 279 (873)
T KOG4194|consen 204 LSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDIS----KLDDGAFYGLEKMEHLNLETN 279 (873)
T ss_pred cccCcccccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcc----cccCcceeeecccceeecccc
Confidence 99999999885 68889999999999999998877777 999999999999865 566778999999999999999
Q ss_pred ccCcchhhccccCCCCCEEEecCCcCcCCCccccccccCCCeEecCCCcCcCCCchhhhcCCCCCEEeCCCCcCCCCCCc
Q 003504 257 QLSGEIFHNFSQAQNLKHLSLAYNRFTRQEFPQIGTLLGLEHLNLSRTSLIGDIPSEILQLSSLHTLDLSMNHLTGQIPT 336 (815)
Q Consensus 257 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~ 336 (815)
++...-...+.+++.|+.|+||+|.|..+.+.......+|+.|+|++|+|+...+..|..|.+|++|+|++|+++..-..
T Consensus 280 ~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~ 359 (873)
T KOG4194|consen 280 RLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEG 359 (873)
T ss_pred hhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhh
Confidence 99988888899999999999999999999988889999999999999999988999999999999999999999865443
Q ss_pred c--CCCCccEEEccCCcCcccCCh--HHhhcCCCCceeeccCCCCcccC
Q 003504 337 V--SAKNLGIIDMSHNNLSGEIPA--SLLEKLPQMERFNFSYNNLTLCA 381 (815)
Q Consensus 337 ~--~~~~L~~L~ls~N~l~~~~p~--~~~~~l~~l~~l~l~~N~l~~~~ 381 (815)
. .+++|+.|||++|.|++.|-+ ..|..++.|+.|.+.||++...+
T Consensus 360 af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~ 408 (873)
T KOG4194|consen 360 AFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIP 408 (873)
T ss_pred HHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecc
Confidence 3 678999999999999986653 46788999999999999987443
No 218
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=3.2e-36 Score=324.56 Aligned_cols=236 Identities=25% Similarity=0.283 Sum_probs=184.9
Q ss_pred CeecccCCeeeEEEEc-CCCcEEEEEEeecCCc---ccHHHHHHHHH-HhcCCCCCCceeeeeEEEeCCeeEEEEEeCCC
Q 003504 514 TLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGST---LTDQEAARELE-YLGRIKHPNLVPLTGYCIAGDQRIAIYDYMEN 588 (815)
Q Consensus 514 ~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~---~~~~~~~~E~~-~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 588 (815)
+.||+|+||.||+|+. .++..||+|++..... .....+.+|.. +++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 4799999999999996 4688999999865321 22334555554 67889999999999999999999999999999
Q ss_pred CChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCce
Q 003504 589 GNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSV 668 (815)
Q Consensus 589 gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NI 668 (815)
|+|..++.. ...+.......++.|++.||+||| +.+|+||||||+||
T Consensus 81 ~~L~~~l~~------------------------------~~~~~~~~~~~~~~qi~~~L~~lH---~~~ivH~Dlkp~NI 127 (321)
T cd05603 81 GELFFHLQR------------------------------ERCFLEPRARFYAAEVASAIGYLH---SLNIIYRDLKPENI 127 (321)
T ss_pred CCHHHHHHH------------------------------cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHe
Confidence 999988854 223566677789999999999999 88999999999999
Q ss_pred EEcCCCCeeecccccceecCC-CCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCcccc
Q 003504 669 YLDMNLEPRLSDFGLAKIFGN-GLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKE 747 (815)
Q Consensus 669 ll~~~~~~kl~Dfgla~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~ 747 (815)
+++.++.+||+|||+++.... ........||+.|+|||.+.+.. ++.++|||||||++|||++|+.||.....
T Consensus 128 ll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DiwslG~il~el~~g~~pf~~~~~---- 201 (321)
T cd05603 128 LLDSQGHVVLTDFGLCKEGVEPEETTSTFCGTPEYLAPEVLRKEP--YDRTVDWWCLGAVLYEMLYGLPPFYSRDV---- 201 (321)
T ss_pred EECCCCCEEEccCCCCccCCCCCCccccccCCcccCCHHHhcCCC--CCCcCcccccchhhhhhhcCCCCCCCCCH----
Confidence 999999999999999875322 22233456899999999987665 78899999999999999999999975321
Q ss_pred ccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHH
Q 003504 748 GNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQ 802 (815)
Q Consensus 748 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ 802 (815)
.......... . ...+.....++.+++.+|++.||.+||++.
T Consensus 202 ---~~~~~~i~~~-~----------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 202 ---SQMYDNILHK-P----------LQLPGGKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred ---HHHHHHHhcC-C----------CCCCCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence 1111221111 0 011233456788999999999999999764
No 219
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=4.4e-36 Score=348.12 Aligned_cols=258 Identities=19% Similarity=0.277 Sum_probs=199.8
Q ss_pred HhcCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCC--cccHHHHHHHHHHhcCCCCCCceeeeeEEEeC--CeeE
Q 003504 506 ATSNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGS--TLTDQEAARELEYLGRIKHPNLVPLTGYCIAG--DQRI 580 (815)
Q Consensus 506 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~ 580 (815)
..++|.+.+.||+|+||.||+|.. .++..||+|.+.... ......+..|+.++++++|||||++++++... ...+
T Consensus 11 ~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ly 90 (1021)
T PTZ00266 11 RLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLY 90 (1021)
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEE
Confidence 446899999999999999999995 457789999886432 22345788999999999999999999988653 4688
Q ss_pred EEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCC----CC
Q 003504 581 AIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGC----SP 656 (815)
Q Consensus 581 lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~----~~ 656 (815)
+||||+++|+|.++|.... .....+++...+.|+.||+.||+|||+.. ..
T Consensus 91 IVMEY~~gGSL~~lL~k~~--------------------------~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k 144 (1021)
T PTZ00266 91 ILMEFCDAGDLSRNIQKCY--------------------------KMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGE 144 (1021)
T ss_pred EEEeCCCCCcHHHHHHHHh--------------------------hccCCCCHHHHHHHHHHHHHHHHHHHhcccccccC
Confidence 9999999999999997521 11235788999999999999999999422 14
Q ss_pred CeeeccCCCCceEEcCC-----------------CCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcC
Q 003504 657 PIIHRDIKASSVYLDMN-----------------LEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKS 719 (815)
Q Consensus 657 ~ivHrDlk~~NIll~~~-----------------~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 719 (815)
+||||||||+|||++.+ +.+||+|||+++............||+.|+|||++.+....++.++
T Consensus 145 ~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KS 224 (1021)
T PTZ00266 145 RVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKS 224 (1021)
T ss_pred CceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchh
Confidence 69999999999999642 3589999999987654444445569999999999876544478899
Q ss_pred cchhHHHHHHHHHhCCCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCC
Q 003504 720 DVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRP 799 (815)
Q Consensus 720 Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP 799 (815)
|||||||++|||++|+.||.... .....+.. +... +.+. ....+.++.+++..||..+|.+||
T Consensus 225 DVWSLG~ILYELLTGk~PF~~~~------~~~qli~~-lk~~-------p~lp---i~~~S~eL~dLI~~~L~~dPeeRP 287 (1021)
T PTZ00266 225 DMWALGCIIYELCSGKTPFHKAN------NFSQLISE-LKRG-------PDLP---IKGKSKELNILIKNLLNLSAKERP 287 (1021)
T ss_pred HHHHHHHHHHHHHHCCCCCCcCC------cHHHHHHH-HhcC-------CCCC---cCCCCHHHHHHHHHHhcCChhHCc
Confidence 99999999999999999997422 11122221 1111 1111 112356789999999999999999
Q ss_pred CHHHHHH
Q 003504 800 SMQQIVG 806 (815)
Q Consensus 800 s~~~v~~ 806 (815)
++.|+++
T Consensus 288 Sa~QlL~ 294 (1021)
T PTZ00266 288 SALQCLG 294 (1021)
T ss_pred CHHHHhc
Confidence 9999983
No 220
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=1.4e-35 Score=311.07 Aligned_cols=246 Identities=26% Similarity=0.392 Sum_probs=197.0
Q ss_pred CCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCccc---------HHHHHHHHHHhcCCCCCCceeeeeEEEeCCe
Q 003504 509 NFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGSTLT---------DQEAARELEYLGRIKHPNLVPLTGYCIAGDQ 578 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~---------~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~ 578 (815)
+|.++..||+|+||.||+|.. .+++.||+|.+....... .+.+.+|++++++++||||+++++++.+.+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 367789999999999999985 467899999886543221 1467889999999999999999999999999
Q ss_pred eEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCe
Q 003504 579 RIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPI 658 (815)
Q Consensus 579 ~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~i 658 (815)
.++|+||+++++|.+++.. ...+++.....++.|++.||+||| +.++
T Consensus 81 ~~lv~e~~~~~~L~~~l~~------------------------------~~~l~~~~~~~~~~~l~~~l~~lH---~~~i 127 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNN------------------------------YGAFEETLVRNFVRQILKGLNYLH---NRGI 127 (267)
T ss_pred cEEEEEecCCCCHHHHHHh------------------------------ccCccHHHHHHHHHHHHHHHHHHH---hcCc
Confidence 9999999999999999964 224677888899999999999999 7899
Q ss_pred eeccCCCCceEEcCCCCeeecccccceecCCCC-------ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHH
Q 003504 659 IHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGL-------DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLEL 731 (815)
Q Consensus 659 vHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el 731 (815)
+||||+|+||++++++.+||+|||.++...... ......|+..|+|||.+.+.. ++.++|||||||++|||
T Consensus 128 vH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~--~~~~~Dv~slG~il~~l 205 (267)
T cd06628 128 IHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTS--YTRKADIWSLGCLVVEM 205 (267)
T ss_pred ccccCCHHHEEEcCCCCEEecccCCCcccccccccCCccccccccCCCcCccChhHhccCC--CCchhhhHHHHHHHHHH
Confidence 999999999999999999999999998765211 111234788999999987655 68899999999999999
Q ss_pred HhCCCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 732 ITGKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 732 ~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
++|+.||...... .. +.... . ...+ ..+...+..+.+++.+||+.||.+||++.+|++
T Consensus 206 ~~g~~p~~~~~~~------~~-~~~~~-~-----~~~~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 206 LTGKHPFPDCTQL------QA-IFKIG-E-----NASP----EIPSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred hhCCCCCCCccHH------HH-HHHHh-c-----cCCC----cCCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 9999999752211 00 11100 0 0111 123345678899999999999999999999986
No 221
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.5e-35 Score=329.57 Aligned_cols=260 Identities=20% Similarity=0.200 Sum_probs=194.7
Q ss_pred hcCCCCCCeecccCCeeeEEEEcC-CCcEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEe
Q 003504 507 TSNFDRGTLLAEGKFGPVYRGFLP-GGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDY 585 (815)
Q Consensus 507 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 585 (815)
..+|.+.+.||+|+||.||+|... .++.||||... ...+.+|++++++++|||||++++++...+..++||||
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~ 241 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPK 241 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 346888999999999999999964 57889999642 23467899999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCC
Q 003504 586 MENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKA 665 (815)
Q Consensus 586 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~ 665 (815)
+. |+|.+++... ...++|..+..|+.|++.||+||| +.+||||||||
T Consensus 242 ~~-~~L~~~l~~~-----------------------------~~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDLKP 288 (461)
T PHA03211 242 YR-SDLYTYLGAR-----------------------------LRPLGLAQVTAVARQLLSAIDYIH---GEGIIHRDIKT 288 (461)
T ss_pred cC-CCHHHHHHhc-----------------------------CCCCCHHHHHHHHHHHHHHHHHHH---HCCEEECcCCH
Confidence 95 6898888642 235889999999999999999999 88999999999
Q ss_pred CceEEcCCCCeeecccccceecCCCC---ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCC
Q 003504 666 SSVYLDMNLEPRLSDFGLAKIFGNGL---DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDY 742 (815)
Q Consensus 666 ~NIll~~~~~~kl~Dfgla~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~ 742 (815)
+|||++.++.+||+|||+++...... ......||..|+|||++.+.. ++.++|||||||++|||++|..|+....
T Consensus 289 ~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~--~~~~sDvwSlGviL~El~~g~~~lf~~~ 366 (461)
T PHA03211 289 ENVLVNGPEDICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAGDP--YTPSVDIWSAGLVIFEAAVHTASLFSAS 366 (461)
T ss_pred HHEEECCCCCEEEcccCCceecccccccccccccCCCcCCcCHHHHcCCC--CCchHHHHHHHHHHHHHHHcCCCcccCC
Confidence 99999999999999999998764322 122346999999999998766 7899999999999999999887654321
Q ss_pred Cccc----cccHHHHHHHHHhc-CCCCc----------------cccccccCCCCH---HHHHHHHHHHhhccccCCCCC
Q 003504 743 PEEK----EGNLVSWVRGLVRN-NKGSR----------------AIDPKIRDTGPE---KQMEEALKIGYLCTADLPLKR 798 (815)
Q Consensus 743 ~~~~----~~~~~~~~~~~~~~-~~~~~----------------~~~~~~~~~~~~---~~~~~~~~l~~~Cl~~dP~~R 798 (815)
.... ...+...++..... ..... ...+........ .....+.+++.+||+.||.+|
T Consensus 367 ~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~R 446 (461)
T PHA03211 367 RGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARR 446 (461)
T ss_pred cccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhC
Confidence 1111 11122222111000 00000 000000000000 123468899999999999999
Q ss_pred CCHHHHHHH
Q 003504 799 PSMQQIVGL 807 (815)
Q Consensus 799 Ps~~~v~~~ 807 (815)
||+.|+++.
T Consensus 447 Psa~elL~h 455 (461)
T PHA03211 447 PSAAELLRL 455 (461)
T ss_pred cCHHHHhhC
Confidence 999999864
No 222
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=5.5e-36 Score=317.50 Aligned_cols=263 Identities=24% Similarity=0.361 Sum_probs=202.4
Q ss_pred HHHHHHHhcCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCcccHHHHHHHHHHhcCC-CCCCceeeeeEEEe--
Q 003504 500 FADLLSATSNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGSTLTDQEAARELEYLGRI-KHPNLVPLTGYCIA-- 575 (815)
Q Consensus 500 ~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~-- 575 (815)
++++..+.++|++.+.||+|+||.||+|.. .+++.+|+|.+... ......+.+|+.++.++ +||||+++++++..
T Consensus 10 ~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~-~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 88 (286)
T cd06638 10 FDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPI-HDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKD 88 (286)
T ss_pred eecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccc-cchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecc
Confidence 345556778999999999999999999985 56889999987542 23346788999999999 69999999998853
Q ss_pred ---CCeeEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhc
Q 003504 576 ---GDQRIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHH 652 (815)
Q Consensus 576 ---~~~~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~ 652 (815)
++..++||||+++|+|.++++... .....+++.....++.|++.||.|||
T Consensus 89 ~~~~~~~~lv~e~~~~~~L~~~l~~~~--------------------------~~~~~~~~~~~~~~~~~i~~~l~~lH- 141 (286)
T cd06638 89 VKNGDQLWLVLELCNGGSVTDLVKGFL--------------------------KRGERMEEPIIAYILHEALMGLQHLH- 141 (286)
T ss_pred cCCCCeEEEEEeecCCCCHHHHHHHhh--------------------------ccCccccHHHHHHHHHHHHHHHHHHH-
Confidence 346899999999999999886421 11335678888999999999999999
Q ss_pred CCCCCeeeccCCCCceEEcCCCCeeecccccceecCCCC-ccccccccccccCCcccCCCC---CCCCCcCcchhHHHHH
Q 003504 653 GCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGL-DEEIARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVL 728 (815)
Q Consensus 653 ~~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~---~~~~~~~Dv~S~Gvvl 728 (815)
+.+++||||||+||+++.++.+||+|||+++...... ......|+..|+|||++.... ..++.++|||||||++
T Consensus 142 --~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~ 219 (286)
T cd06638 142 --VNKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITA 219 (286)
T ss_pred --hCCccccCCCHHhEEECCCCCEEEccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHH
Confidence 8899999999999999999999999999998764322 223446899999999875321 2267899999999999
Q ss_pred HHHHhCCCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003504 729 LELITGKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGL 807 (815)
Q Consensus 729 ~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~ 807 (815)
|||++|+.||....+... +. ... .. ..+.. ..+..+..++.+++.+||+.||++||++.++++.
T Consensus 220 ~el~~g~~p~~~~~~~~~---~~----~~~-~~-----~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 220 IELGDGDPPLADLHPMRA---LF----KIP-RN-----PPPTL--HQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred HHHhcCCCCCCCCchhHH---Hh----hcc-cc-----CCCcc--cCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 999999999875322110 00 000 00 00111 1122344578899999999999999999999874
No 223
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=1.3e-35 Score=310.85 Aligned_cols=248 Identities=24% Similarity=0.379 Sum_probs=197.6
Q ss_pred CCCCCCeecccCCeeeEEEEcCCCcEEEEEEeecCCc------ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEE
Q 003504 509 NFDRGTLLAEGKFGPVYRGFLPGGIHVAVKVLVHGST------LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAI 582 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~l~~~~~------~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv 582 (815)
+|...+.||+|+||.||+|...++..+|||.+..... .....+.+|++++++++|+||+++++++.+....++|
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 4778899999999999999988899999998864321 1124588999999999999999999999999999999
Q ss_pred EEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecc
Q 003504 583 YDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRD 662 (815)
Q Consensus 583 ~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrD 662 (815)
+||+++|+|.+++... ..+++.....++.|++.||+||| +.+|+|+|
T Consensus 81 ~e~~~~~~L~~~l~~~------------------------------~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~d 127 (265)
T cd06631 81 MEFVPGGSISSILNRF------------------------------GPLPEPVFCKYTKQILDGVAYLH---NNCVVHRD 127 (265)
T ss_pred EecCCCCcHHHHHHhc------------------------------CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCC
Confidence 9999999999999642 24577888899999999999999 78999999
Q ss_pred CCCCceEEcCCCCeeecccccceecCCC-------CccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCC
Q 003504 663 IKASSVYLDMNLEPRLSDFGLAKIFGNG-------LDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735 (815)
Q Consensus 663 lk~~NIll~~~~~~kl~Dfgla~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~ 735 (815)
|+|+||+++.++.+||+|||++...... .......|+..|+|||.+.+.. ++.++|||||||++||+++|+
T Consensus 128 l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~--~~~~~Dv~slG~~~~~l~~g~ 205 (265)
T cd06631 128 IKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESG--YGRKSDIWSIGCTVFEMATGK 205 (265)
T ss_pred cCHHhEEECCCCeEEeccchhhHhhhhccccccccccccccCCCccccChhhhcCCC--CcchhhHHHHHHHHHHHHhCC
Confidence 9999999999999999999998764311 1122345889999999987665 688999999999999999999
Q ss_pred CCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 736 KPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 736 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
.||....... .. ....... ...+. .+...+.++.+++.+||..+|++||++.++++
T Consensus 206 ~p~~~~~~~~---~~----~~~~~~~----~~~~~----~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 206 PPLASMDRLA---AM----FYIGAHR----GLMPR----LPDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred CccccCChHH---HH----HHhhhcc----CCCCC----CCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 9997432111 00 0001100 00111 13345667899999999999999999999875
No 224
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=7.5e-36 Score=317.28 Aligned_cols=264 Identities=25% Similarity=0.360 Sum_probs=205.2
Q ss_pred cCHHHHHHHhcCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCcccHHHHHHHHHHhcCC-CCCCceeeeeEEEe
Q 003504 498 ITFADLLSATSNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGSTLTDQEAARELEYLGRI-KHPNLVPLTGYCIA 575 (815)
Q Consensus 498 ~~~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~ 575 (815)
+++.++..++++|++.+.||+|+||.||+|.. .+++.+|+|.+... ......+.+|+.+++++ +|||++++++++..
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~-~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~ 90 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPI-SDVDEEIEAEYNILQSLPNHPNVVKFYGMFYK 90 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEeccc-ccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence 34455666788999999999999999999995 56889999998653 23356788899999999 79999999999876
Q ss_pred CC-----eeEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHH
Q 003504 576 GD-----QRIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFL 650 (815)
Q Consensus 576 ~~-----~~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yL 650 (815)
.+ ..++|+||+++|+|.++++... .....+++..+..++.|++.||+||
T Consensus 91 ~~~~~~~~~~lv~ey~~~~sL~~~~~~~~--------------------------~~~~~~~~~~~~~~~~qi~~al~~l 144 (291)
T cd06639 91 ADKLVGGQLWLVLELCNGGSVTELVKGLL--------------------------ICGQRLDEAMISYILYGALLGLQHL 144 (291)
T ss_pred ccccCCCeeEEEEEECCCCcHHHHHHHhh--------------------------hcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 43 5799999999999999986421 1134578899999999999999999
Q ss_pred hcCCCCCeeeccCCCCceEEcCCCCeeecccccceecCCCC-ccccccccccccCCcccCCCCC---CCCCcCcchhHHH
Q 003504 651 HHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGL-DEEIARGSPGYIPPEFAQPDSD---FPTPKSDVYCYGV 726 (815)
Q Consensus 651 H~~~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~---~~~~~~Dv~S~Gv 726 (815)
| +.+++||||||+||+++.++.+||+|||+++...... ......|+..|+|||.+..... .++.++|||||||
T Consensus 145 H---~~~ivH~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGv 221 (291)
T cd06639 145 H---NNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGI 221 (291)
T ss_pred H---hCCeeccCCCHHHEEEcCCCCEEEeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHH
Confidence 9 7899999999999999999999999999988654322 2233468899999998764321 2578999999999
Q ss_pred HHHHHHhCCCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 727 VLLELITGKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 727 vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
++|||++|+.||....+.+ .+.. .. .... +.+ ..++.....+.+++.+||+.+|++||++.++++
T Consensus 222 i~~el~~g~~p~~~~~~~~---~~~~----~~-~~~~-----~~~--~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 222 TAIELGDGDPPLFDMHPVK---TLFK----IP-RNPP-----PTL--LHPEKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred HHHHHhhCCCCCCCCcHHH---HHHH----Hh-cCCC-----CCC--CcccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 9999999999997532211 1111 11 1111 111 113344567899999999999999999999975
No 225
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=8.2e-36 Score=313.12 Aligned_cols=255 Identities=23% Similarity=0.334 Sum_probs=190.4
Q ss_pred CeecccCCeeeEEEEcCC---CcEEEEEEeecCCc-ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeCCCC
Q 003504 514 TLLAEGKFGPVYRGFLPG---GIHVAVKVLVHGST-LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENG 589 (815)
Q Consensus 514 ~~ig~G~~g~Vy~~~~~~---~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~g 589 (815)
+.||+|+||.||+|...+ ...+|+|.+..... .....+.+|+.+++.++||||++++|++......++||||+++|
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLG 80 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCC
Confidence 368999999999997533 35688888754322 23456889999999999999999999999999999999999999
Q ss_pred ChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCceE
Q 003504 590 NLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVY 669 (815)
Q Consensus 590 sL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NIl 669 (815)
+|.+++...+. ......++.....++.|++.||+||| +.+|+||||||+||+
T Consensus 81 ~L~~~l~~~~~-------------------------~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil 132 (269)
T cd05042 81 DLKNYLRSNRG-------------------------MVAQMAQKDVLQRMACEVASGLLWLH---QADFIHSDLALRNCQ 132 (269)
T ss_pred cHHHHHHhccc-------------------------cccccccHHHHHHHHHHHHHHHHHHH---hcCEecccccHhheE
Confidence 99999976321 01223467778899999999999999 889999999999999
Q ss_pred EcCCCCeeecccccceecCCCC---ccccccccccccCCcccCCC-----CCCCCCcCcchhHHHHHHHHHh-CCCCCCC
Q 003504 670 LDMNLEPRLSDFGLAKIFGNGL---DEEIARGSPGYIPPEFAQPD-----SDFPTPKSDVYCYGVVLLELIT-GKKPLGD 740 (815)
Q Consensus 670 l~~~~~~kl~Dfgla~~~~~~~---~~~~~~gt~~y~aPE~~~~~-----~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~ 740 (815)
+++++.+||+|||+++...... ......++..|+|||++... ...++.++|||||||++|||++ |..||..
T Consensus 133 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~ 212 (269)
T cd05042 133 LTADLSVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPD 212 (269)
T ss_pred ecCCCcEEEeccccccccccchheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCc
Confidence 9999999999999987543321 11223456789999987532 1225789999999999999999 7888864
Q ss_pred CCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 003504 741 DYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLK 809 (815)
Q Consensus 741 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~ 809 (815)
....+ . ....... ......++.+ +...+.++.+++..|| .||++||++++|++.|.
T Consensus 213 ~~~~~----~---~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 213 LSDEQ----V---LKQVVRE-QDIKLPKPQL----DLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred CCHHH----H---HHHHhhc-cCccCCCCcc----cccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 32211 1 1111111 1111222222 2345566778889999 49999999999999873
No 226
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.3e-35 Score=321.82 Aligned_cols=270 Identities=27% Similarity=0.335 Sum_probs=205.3
Q ss_pred cCCCCCCeecccCCeeeEEEEcC--------CCcEEEEEEeecCCc-ccHHHHHHHHHHhcCC-CCCCceeeeeEEEeCC
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFLP--------GGIHVAVKVLVHGST-LTDQEAARELEYLGRI-KHPNLVPLTGYCIAGD 577 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~~--------~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~ 577 (815)
.+|.+++.||+|+||.||+|+.. .+..||+|.+..... ...+.+.+|++++.++ +||||++++++|...+
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 91 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence 46888999999999999999742 134689998865322 2346788999999999 7999999999999998
Q ss_pred eeEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCC
Q 003504 578 QRIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPP 657 (815)
Q Consensus 578 ~~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ 657 (815)
..++|+||+++|+|.+++......... . ...........++|..+++++.|++.||+||| +.+
T Consensus 92 ~~~lv~e~~~~g~L~~~l~~~~~~~~~---~-----------~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~g 154 (334)
T cd05100 92 PLYVLVEYASKGNLREYLRARRPPGMD---Y-----------SFDTCKLPEEQLTFKDLVSCAYQVARGMEYLA---SQK 154 (334)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccc---c-----------ccccccCccccCCHHHHHHHHHHHHHHHHHHH---HCC
Confidence 999999999999999999753211000 0 00000012346889999999999999999999 899
Q ss_pred eeeccCCCCceEEcCCCCeeecccccceecCCCCc---cccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-
Q 003504 658 IIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLD---EEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT- 733 (815)
Q Consensus 658 ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t- 733 (815)
++||||||+||+++.++.+||+|||+++....... .....++..|+|||.+.... ++.++|||||||++|||++
T Consensus 155 ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~Di~slG~il~el~~~ 232 (334)
T cd05100 155 CIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRV--YTHQSDVWSFGVLLWEIFTL 232 (334)
T ss_pred eeccccccceEEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCC--cCchhhhHHHHHHHHHHHhc
Confidence 99999999999999999999999999987643221 12223456799999987665 6889999999999999998
Q ss_pred CCCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhhhh
Q 003504 734 GKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDIES 813 (815)
Q Consensus 734 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~~ 813 (815)
|..||..... ..+........ ....+..++.++.+++.+||+.+|++||+|.++++.|+++..
T Consensus 233 g~~p~~~~~~-------~~~~~~~~~~~----------~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~ 295 (334)
T cd05100 233 GGSPYPGIPV-------EELFKLLKEGH----------RMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLT 295 (334)
T ss_pred CCCCCCCCCH-------HHHHHHHHcCC----------CCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhh
Confidence 8888864321 22222221111 111123445678999999999999999999999999998863
No 227
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=5.1e-36 Score=328.45 Aligned_cols=258 Identities=21% Similarity=0.273 Sum_probs=199.3
Q ss_pred HHHHHhcCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCC---cccHHHHHHHHHHhcCCCCCCceeeeeEEEeCC
Q 003504 502 DLLSATSNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGS---TLTDQEAARELEYLGRIKHPNLVPLTGYCIAGD 577 (815)
Q Consensus 502 ~l~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~ 577 (815)
++....++|++.+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+..
T Consensus 37 ~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~ 116 (371)
T cd05622 37 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR 116 (371)
T ss_pred hcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC
Confidence 4445567899999999999999999995 468899999986421 122345788999999999999999999999999
Q ss_pred eeEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCC
Q 003504 578 QRIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPP 657 (815)
Q Consensus 578 ~~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ 657 (815)
..++||||+++|+|.+++... .++......++.|++.||+||| +.+
T Consensus 117 ~~~lv~Ey~~gg~L~~~~~~~-------------------------------~~~~~~~~~~~~qi~~aL~~LH---~~~ 162 (371)
T cd05622 117 YLYMVMEYMPGGDLVNLMSNY-------------------------------DVPEKWARFYTAEVVLALDAIH---SMG 162 (371)
T ss_pred EEEEEEcCCCCCcHHHHHHhc-------------------------------CCCHHHHHHHHHHHHHHHHHHH---HCC
Confidence 999999999999999998642 2455667789999999999999 899
Q ss_pred eeeccCCCCceEEcCCCCeeecccccceecCCCC--ccccccccccccCCcccCCCC--CCCCCcCcchhHHHHHHHHHh
Q 003504 658 IIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGL--DEEIARGSPGYIPPEFAQPDS--DFPTPKSDVYCYGVVLLELIT 733 (815)
Q Consensus 658 ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~--~~~~~~gt~~y~aPE~~~~~~--~~~~~~~Dv~S~Gvvl~el~t 733 (815)
|+||||||+|||++.++.+||+|||+++...... ......||+.|+|||++.... ..++.++|||||||++|||++
T Consensus 163 ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~ 242 (371)
T cd05622 163 FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLV 242 (371)
T ss_pred EEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHh
Confidence 9999999999999999999999999998765332 223456999999999986543 236789999999999999999
Q ss_pred CCCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCC--CCCHHHHHHH
Q 003504 734 GKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLK--RPSMQQIVGL 807 (815)
Q Consensus 734 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~--RPs~~~v~~~ 807 (815)
|+.||..... ............. +........+.++.+++.+|+..+|.+ ||+++++++.
T Consensus 243 G~~Pf~~~~~-------~~~~~~i~~~~~~-------~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h 304 (371)
T cd05622 243 GDTPFYADSL-------VGTYSKIMNHKNS-------LTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 304 (371)
T ss_pred CCCCCCCCCH-------HHHHHHHHcCCCc-------ccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcC
Confidence 9999975322 1112222221110 000112234567888999999844433 7788888764
No 228
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=7.6e-36 Score=326.43 Aligned_cols=264 Identities=19% Similarity=0.204 Sum_probs=197.4
Q ss_pred HhcCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCC--cccHHHHHHHHHHhcCCCCCCceeeeeEEEeCC-----
Q 003504 506 ATSNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGS--TLTDQEAARELEYLGRIKHPNLVPLTGYCIAGD----- 577 (815)
Q Consensus 506 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~----- 577 (815)
..++|...+.||+|+||.||+|.. ..++.||||.+.... ......+.+|+.+++.++||||+++++++....
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 346899999999999999999985 468899999986532 223456788999999999999999999886532
Q ss_pred -eeEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCC
Q 003504 578 -QRIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSP 656 (815)
Q Consensus 578 -~~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~ 656 (815)
..++||||+++ ++.+.+.. .+++..+..++.|++.||+||| +.
T Consensus 95 ~~~~lv~e~~~~-~l~~~~~~--------------------------------~l~~~~~~~~~~qi~~aL~~LH---~~ 138 (355)
T cd07874 95 QDVYLVMELMDA-NLCQVIQM--------------------------------ELDHERMSYLLYQMLCGIKHLH---SA 138 (355)
T ss_pred ceeEEEhhhhcc-cHHHHHhh--------------------------------cCCHHHHHHHHHHHHHHHHHHH---hC
Confidence 46899999976 66666642 3567778899999999999999 89
Q ss_pred CeeeccCCCCceEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCC
Q 003504 657 PIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKK 736 (815)
Q Consensus 657 ~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~ 736 (815)
+|+||||||+||+++.++.+||+|||+++............||..|+|||++.+.. ++.++|||||||++|||++|+.
T Consensus 139 givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~--~~~~~DiwslG~il~el~~g~~ 216 (355)
T cd07874 139 GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG--YKENVDIWSVGCIMGEMVRHKI 216 (355)
T ss_pred CcccCCCChHHEEECCCCCEEEeeCcccccCCCccccCCccccCCccCHHHHcCCC--CCchhhHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999998765544445567899999999987665 7889999999999999999999
Q ss_pred CCCCCCCccccccHH---------------HHHHHHHhcCC-CCcccccccc--------CCCCHHHHHHHHHHHhhccc
Q 003504 737 PLGDDYPEEKEGNLV---------------SWVRGLVRNNK-GSRAIDPKIR--------DTGPEKQMEEALKIGYLCTA 792 (815)
Q Consensus 737 p~~~~~~~~~~~~~~---------------~~~~~~~~~~~-~~~~~~~~~~--------~~~~~~~~~~~~~l~~~Cl~ 792 (815)
||.+....+...... ..+........ ......+... ...+.....++.+++.+|++
T Consensus 217 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~ 296 (355)
T cd07874 217 LFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLV 296 (355)
T ss_pred CCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhc
Confidence 997533211110000 00111111100 0000000000 00112234678899999999
Q ss_pred cCCCCCCCHHHHHHH
Q 003504 793 DLPLKRPSMQQIVGL 807 (815)
Q Consensus 793 ~dP~~RPs~~~v~~~ 807 (815)
.||++|||+.|+++.
T Consensus 297 ~dP~~Rps~~ell~h 311 (355)
T cd07874 297 IDPAKRISVDEALQH 311 (355)
T ss_pred CCchhcCCHHHHhcC
Confidence 999999999999873
No 229
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=1.5e-35 Score=311.96 Aligned_cols=246 Identities=24% Similarity=0.385 Sum_probs=201.0
Q ss_pred CCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCC-cccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeC
Q 003504 509 NFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGS-TLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYM 586 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 586 (815)
+|+..+.||.|+||.||+|.. .++..||+|.+.... ......+.+|+++++.++||||+++++++.+....++|+||+
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYC 81 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEee
Confidence 677889999999999999995 468899999986543 333467889999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCC
Q 003504 587 ENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKAS 666 (815)
Q Consensus 587 ~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~ 666 (815)
++++|.++++.. .+++.....++.|++.||.||| +.+++||||+|+
T Consensus 82 ~~~~L~~~~~~~-------------------------------~~~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~ 127 (274)
T cd06609 82 GGGSCLDLLKPG-------------------------------KLDETYIAFILREVLLGLEYLH---EEGKIHRDIKAA 127 (274)
T ss_pred CCCcHHHHHhhc-------------------------------CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHH
Confidence 999999998641 5778899999999999999999 889999999999
Q ss_pred ceEEcCCCCeeecccccceecCCCC-ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCcc
Q 003504 667 SVYLDMNLEPRLSDFGLAKIFGNGL-DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEE 745 (815)
Q Consensus 667 NIll~~~~~~kl~Dfgla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~ 745 (815)
||++++++.++|+|||+++...... ......|+..|+|||++.+.. ++.++|||||||++||+++|+.||....+.
T Consensus 128 ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~--~~~~sDv~slG~il~~l~tg~~p~~~~~~~- 204 (274)
T cd06609 128 NILLSEEGDVKLADFGVSGQLTSTMSKRNTFVGTPFWMAPEVIKQSG--YDEKADIWSLGITAIELAKGEPPLSDLHPM- 204 (274)
T ss_pred HEEECCCCCEEEcccccceeecccccccccccCCccccChhhhccCC--CCchhhHHHHHHHHHHHHhCCCCcccCchH-
Confidence 9999999999999999998876442 233456888999999988766 789999999999999999999999753211
Q ss_pred ccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 746 KEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 746 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
..... ..... .+.+.. ...+.++.+++.+||..+|++||+++++++
T Consensus 205 ------~~~~~-~~~~~-----~~~~~~---~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 205 ------RVLFL-IPKNN-----PPSLEG---NKFSKPFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred ------HHHHH-hhhcC-----CCCCcc---cccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 11111 11111 111111 114567889999999999999999999975
No 230
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=9.6e-36 Score=315.45 Aligned_cols=263 Identities=23% Similarity=0.314 Sum_probs=197.5
Q ss_pred CCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCC--cccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEe
Q 003504 509 NFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGS--TLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDY 585 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 585 (815)
+|+..+.||+|++|.||+|+. .++..||||.++... ......+.+|+.++++++||||+++++++.++...++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 477789999999999999996 468899999986432 22346788999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCC
Q 003504 586 MENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKA 665 (815)
Q Consensus 586 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~ 665 (815)
++ |+|.++++... ....+++.....++.|++.||+||| +.+++||||||
T Consensus 81 ~~-~~l~~~~~~~~---------------------------~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dl~p 129 (285)
T cd07861 81 LS-MDLKKYLDSLP---------------------------KGQYMDAELVKSYLYQILQGILFCH---SRRVLHRDLKP 129 (285)
T ss_pred CC-CCHHHHHhcCC---------------------------CCCcCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCCH
Confidence 98 68988886531 1245788899999999999999999 89999999999
Q ss_pred CceEEcCCCCeeecccccceecCCCC-ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCc
Q 003504 666 SSVYLDMNLEPRLSDFGLAKIFGNGL-DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPE 744 (815)
Q Consensus 666 ~NIll~~~~~~kl~Dfgla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~ 744 (815)
+||+++.++.+||+|||++....... ......+++.|+|||.+.+... ++.++|||||||++|||++|+.||......
T Consensus 130 ~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~~Dv~slG~il~~l~tg~~~~~~~~~~ 208 (285)
T cd07861 130 QNLLIDNKGVIKLADFGLARAFGIPVRVYTHEVVTLWYRAPEVLLGSPR-YSTPVDIWSIGTIFAEMATKKPLFHGDSEI 208 (285)
T ss_pred HHEEEcCCCcEEECcccceeecCCCcccccCCcccccccChHHhcCCCC-cCcHHHHHHHHHHHHHHHHCCCCCCCCCHH
Confidence 99999999999999999998654322 1223357889999998765442 578999999999999999999999753221
Q ss_pred cccccHHHHHHHHHh-------c----CCCCccccc---cccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 745 EKEGNLVSWVRGLVR-------N----NKGSRAIDP---KIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 745 ~~~~~~~~~~~~~~~-------~----~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
.. .......... . ......++. ..........+.++.+++.+||..||++||++.+|++
T Consensus 209 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 209 DQ---LFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred HH---HHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 11 1110000000 0 000000000 0000001224567889999999999999999999875
No 231
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=2e-35 Score=307.81 Aligned_cols=249 Identities=24% Similarity=0.342 Sum_probs=202.4
Q ss_pred CCCCCCeecccCCeeeEEEE-cCCCcEEEEEEeecCC--cccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEe
Q 003504 509 NFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHGS--TLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDY 585 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 585 (815)
+|+..+.||.|+||.||.+. ..++..||+|.+.... ......+.+|++++++++|+||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 47788999999999999988 4568899999886532 33456788999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCC
Q 003504 586 MENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKA 665 (815)
Q Consensus 586 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~ 665 (815)
+++|+|.+++... ....+++..+..++.|++.||+||| +.+++||||+|
T Consensus 81 ~~~~~L~~~~~~~----------------------------~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p 129 (256)
T cd08221 81 ANGGTLYDKIVRQ----------------------------KGQLFEEEMVLWYLFQIVSAVSYIH---KAGILHRDIKT 129 (256)
T ss_pred cCCCcHHHHHHhc----------------------------cccCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCCh
Confidence 9999999999752 1335788899999999999999999 78999999999
Q ss_pred CceEEcCCCCeeecccccceecCCCC-ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCc
Q 003504 666 SSVYLDMNLEPRLSDFGLAKIFGNGL-DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPE 744 (815)
Q Consensus 666 ~NIll~~~~~~kl~Dfgla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~ 744 (815)
+||++++++.+||+|||++....... ......|++.|+|||...+.. ++.++||||||+++|||++|+.||.....
T Consensus 130 ~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~--~~~~~Dv~slG~i~~~l~~g~~~~~~~~~- 206 (256)
T cd08221 130 LNIFLTKAGLIKLGDFGISKILGSEYSMAETVVGTPYYMSPELCQGVK--YNFKSDIWALGCVLYELLTLKRTFDATNP- 206 (256)
T ss_pred HhEEEeCCCCEEECcCcceEEcccccccccccCCCccccCHhhcCCCC--CCCcchhHHHHHHHHHHHHCCCCCCCCCH-
Confidence 99999999999999999998764433 233456899999999987665 68899999999999999999999865322
Q ss_pred cccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003504 745 EKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGL 807 (815)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~ 807 (815)
........... .. ..+...+.++.+++.+||..+|++||+++++++.
T Consensus 207 ------~~~~~~~~~~~---------~~-~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 207 ------LNLVVKIVQGN---------YT-PVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred ------HHHHHHHHcCC---------CC-CCccccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence 12222222111 00 1123445678899999999999999999999875
No 232
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=2.3e-35 Score=308.40 Aligned_cols=254 Identities=24% Similarity=0.343 Sum_probs=203.9
Q ss_pred cCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeC
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYM 586 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 586 (815)
++|+..+.||+|+||.||+|.. .++..+|+|.+........+.+.+|++++++++||||+++++++......+++|||+
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~ 82 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYC 82 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCC
Confidence 5788889999999999999995 457889999997655555678999999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCC
Q 003504 587 ENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKAS 666 (815)
Q Consensus 587 ~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~ 666 (815)
++++|.+++... ...++......++.|++.||+||| +.+++||||+|+
T Consensus 83 ~~~~l~~~~~~~-----------------------------~~~l~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~ 130 (262)
T cd06613 83 GGGSLQDIYQVT-----------------------------RGPLSELQIAYVCRETLKGLAYLH---ETGKIHRDIKGA 130 (262)
T ss_pred CCCcHHHHHHhh-----------------------------ccCCCHHHHHHHHHHHHHHHHHHH---hCCceecCCChh
Confidence 999999998652 234677888999999999999999 889999999999
Q ss_pred ceEEcCCCCeeecccccceecCCCC-ccccccccccccCCcccCCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCCc
Q 003504 667 SVYLDMNLEPRLSDFGLAKIFGNGL-DEEIARGSPGYIPPEFAQPDS-DFPTPKSDVYCYGVVLLELITGKKPLGDDYPE 744 (815)
Q Consensus 667 NIll~~~~~~kl~Dfgla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~ 744 (815)
||++++++.+||+|||.+....... ......++..|+|||.+.... ..++.++|||||||++|||++|+.||....+.
T Consensus 131 ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~ 210 (262)
T cd06613 131 NILLTEDGDVKLADFGVSAQLTATIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPM 210 (262)
T ss_pred hEEECCCCCEEECccccchhhhhhhhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHH
Confidence 9999999999999999988665332 223345788999999987651 12688999999999999999999999753321
Q ss_pred cccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 745 EKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
.. .. . ..... ...+.. ..+...+.++.+++.+||..+|.+||++++|++
T Consensus 211 ~~---~~----~-~~~~~---~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 211 RA---LF----L-ISKSN---FPPPKL--KDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred HH---HH----H-HHhcc---CCCccc--cchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 11 11 0 11110 001111 123445678999999999999999999999975
No 233
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=7.3e-36 Score=315.50 Aligned_cols=254 Identities=23% Similarity=0.367 Sum_probs=203.1
Q ss_pred hcCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEe
Q 003504 507 TSNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDY 585 (815)
Q Consensus 507 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 585 (815)
.++|++.+.||+|+||.||+|.. .++..||+|.+........+.+.+|++++++++||||+++++++......++||||
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF 83 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence 35688889999999999999996 46889999998765555566789999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCC
Q 003504 586 MENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKA 665 (815)
Q Consensus 586 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~ 665 (815)
+++|+|.+++... ...+++.....++.|++.||.||| +.+|+||||||
T Consensus 84 ~~~~~L~~~~~~~-----------------------------~~~l~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p 131 (280)
T cd06611 84 CDGGALDSIMLEL-----------------------------ERGLTEPQIRYVCRQMLEALNFLH---SHKVIHRDLKA 131 (280)
T ss_pred cCCCcHHHHHHHh-----------------------------cCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCh
Confidence 9999999998652 235778889999999999999999 88999999999
Q ss_pred CceEEcCCCCeeecccccceecCCCC-ccccccccccccCCcccCCC---CCCCCCcCcchhHHHHHHHHHhCCCCCCCC
Q 003504 666 SSVYLDMNLEPRLSDFGLAKIFGNGL-DEEIARGSPGYIPPEFAQPD---SDFPTPKSDVYCYGVVLLELITGKKPLGDD 741 (815)
Q Consensus 666 ~NIll~~~~~~kl~Dfgla~~~~~~~-~~~~~~gt~~y~aPE~~~~~---~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~ 741 (815)
+||+++.++.++|+|||++....... ......|+..|+|||.+... ...++.++||||||+++|||++|+.||...
T Consensus 132 ~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~ 211 (280)
T cd06611 132 GNILLTLDGDVKLADFGVSAKNKSTLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHEL 211 (280)
T ss_pred hhEEECCCCCEEEccCccchhhcccccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccC
Confidence 99999999999999999987654322 22334589999999987532 122577999999999999999999999753
Q ss_pred CCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003504 742 YPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGL 807 (815)
Q Consensus 742 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~ 807 (815)
... .......... .+.+ ..+...+.++.+++.+||..+|++||++.++++.
T Consensus 212 ~~~-------~~~~~~~~~~------~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 212 NPM-------RVLLKILKSE------PPTL--DQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred CHH-------HHHHHHhcCC------CCCc--CCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 221 1111111110 0111 1133455678899999999999999999999764
No 234
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=5.8e-36 Score=319.83 Aligned_cols=254 Identities=23% Similarity=0.381 Sum_probs=198.6
Q ss_pred hcCCCCCCeecccCCeeeEEEEc-CCCc----EEEEEEeecCCc-ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeE
Q 003504 507 TSNFDRGTLLAEGKFGPVYRGFL-PGGI----HVAVKVLVHGST-LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRI 580 (815)
Q Consensus 507 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~----~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 580 (815)
.++|+..+.||+|+||.||+|+. .++. .||+|.+..... .....+.+|+.++++++||||++++|+|... ..+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~ 84 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQ 84 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cce
Confidence 34677889999999999999985 3343 578998865322 2234688999999999999999999998754 467
Q ss_pred EEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeee
Q 003504 581 AIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIH 660 (815)
Q Consensus 581 lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivH 660 (815)
+++||+++|+|.+++... ...+++..+..++.|++.||+||| +.+|+|
T Consensus 85 ~v~e~~~~g~l~~~~~~~-----------------------------~~~~~~~~~~~~~~qi~~~L~~LH---~~~ivH 132 (303)
T cd05110 85 LVTQLMPHGCLLDYVHEH-----------------------------KDNIGSQLLLNWCVQIAKGMMYLE---ERRLVH 132 (303)
T ss_pred eeehhcCCCCHHHHHHhc-----------------------------ccCCCHHHHHHHHHHHHHHHHHHh---hcCeec
Confidence 899999999999998652 234678889999999999999999 899999
Q ss_pred ccCCCCceEEcCCCCeeecccccceecCCCCc---cccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CCC
Q 003504 661 RDIKASSVYLDMNLEPRLSDFGLAKIFGNGLD---EEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GKK 736 (815)
Q Consensus 661 rDlk~~NIll~~~~~~kl~Dfgla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~ 736 (815)
|||||+||+++.++.+||+|||+++....... .....++..|+|||.+.+.. ++.++|||||||++||+++ |+.
T Consensus 133 ~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~--~~~~~DiwslG~~l~el~t~g~~ 210 (303)
T cd05110 133 RDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRK--FTHQSDVWSYGVTIWELMTFGGK 210 (303)
T ss_pred cccccceeeecCCCceEEccccccccccCcccccccCCCccccccCCHHHhccCC--CChHHHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999987653321 22233567899999987655 6889999999999999998 899
Q ss_pred CCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhhh
Q 003504 737 PLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDIE 812 (815)
Q Consensus 737 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~ 812 (815)
||.+... .....+ ..... .. ..+..++..+.+++.+||..+|++||+++++++.|+++.
T Consensus 211 p~~~~~~----~~~~~~----~~~~~--~~-------~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~ 269 (303)
T cd05110 211 PYDGIPT----REIPDL----LEKGE--RL-------PQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMA 269 (303)
T ss_pred CCCCCCH----HHHHHH----HHCCC--CC-------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 9865321 112221 11110 00 012223457889999999999999999999999998874
No 235
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=1.3e-35 Score=311.60 Aligned_cols=256 Identities=21% Similarity=0.282 Sum_probs=200.9
Q ss_pred CCCCCCeecccCCeeeEEEEcCC--CcEEEEEEeecCC----------cccHHHHHHHHHHhcC-CCCCCceeeeeEEEe
Q 003504 509 NFDRGTLLAEGKFGPVYRGFLPG--GIHVAVKVLVHGS----------TLTDQEAARELEYLGR-IKHPNLVPLTGYCIA 575 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~~~--~~~vavK~l~~~~----------~~~~~~~~~E~~~l~~-l~H~niv~l~g~~~~ 575 (815)
+|++.+.||+|+||.||+|.... +..+|||.+.... .....++.+|+.++.+ ++||||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47778999999999999999654 6889999885321 1122456778888765 799999999999999
Q ss_pred CCeeEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCC
Q 003504 576 GDQRIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCS 655 (815)
Q Consensus 576 ~~~~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~ 655 (815)
.+..++||||+++++|.+++.... .....+++..+++++.|++.||.|||+ .
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~--------------------------~~~~~~~~~~~~~~~~~l~~~l~~lh~--~ 132 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLK--------------------------EKKQRFTEERIWNIFVQMVLALRYLHK--E 132 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHH--------------------------hccCCCCHHHHHHHHHHHHHHHHHhcc--C
Confidence 999999999999999999885421 113457888899999999999999993 3
Q ss_pred CCeeeccCCCCceEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCC
Q 003504 656 PPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735 (815)
Q Consensus 656 ~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~ 735 (815)
.+++||||+|+||+++.++.+||+|||.+.............|+..|+|||.+.+.. ++.++||||||+++||+++|+
T Consensus 133 ~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~--~~~~~Dv~slG~ll~~l~~g~ 210 (269)
T cd08528 133 KRIVHRDLTPNNIMLGEDDKVTITDFGLAKQKQPESKLTSVVGTILYSCPEIVKNEP--YGEKADVWAFGCILYQMCTLQ 210 (269)
T ss_pred CceeecCCCHHHEEECCCCcEEEecccceeecccccccccccCcccCcChhhhcCCC--CchHHHHHHHHHHHHHHHhCC
Confidence 689999999999999999999999999998765443334556899999999987655 688999999999999999999
Q ss_pred CCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHh
Q 003504 736 KPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKD 810 (815)
Q Consensus 736 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~ 810 (815)
.||..... ........... .........+.++.+++.+||+.||++||++.|+.+++++
T Consensus 211 ~p~~~~~~-------~~~~~~~~~~~---------~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~~ 269 (269)
T cd08528 211 PPFYSTNM-------LSLATKIVEAV---------YEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMISD 269 (269)
T ss_pred CcccccCH-------HHHHHHHhhcc---------CCcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhcC
Confidence 99864221 11122111111 1111112345678899999999999999999999998863
No 236
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=2.2e-35 Score=307.89 Aligned_cols=240 Identities=25% Similarity=0.355 Sum_probs=189.9
Q ss_pred CeecccCCeeeEEEEcCCC-----------cEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEE
Q 003504 514 TLLAEGKFGPVYRGFLPGG-----------IHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAI 582 (815)
Q Consensus 514 ~~ig~G~~g~Vy~~~~~~~-----------~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv 582 (815)
+.||+|+||.||+|...+. ..|++|.+...... ...+.+|+.++++++||||++++|++.. ...++|
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv 78 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV 78 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence 4689999999999997543 25788877553322 6788999999999999999999999988 788999
Q ss_pred EEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecc
Q 003504 583 YDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRD 662 (815)
Q Consensus 583 ~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrD 662 (815)
|||+++|+|.+++... ...+++..+..++.|++.||+||| +.+|+|||
T Consensus 79 ~e~~~~~~L~~~l~~~-----------------------------~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~d 126 (259)
T cd05037 79 EEYVKFGPLDVFLHRE-----------------------------KNNVSLHWKLDVAKQLASALHYLE---DKKLVHGN 126 (259)
T ss_pred EEcCCCCcHHHHHHhh-----------------------------ccCCCHHHHHHHHHHHHHHHHHHh---hCCeeccc
Confidence 9999999999999752 225788889999999999999999 89999999
Q ss_pred CCCCceEEcCCC-------CeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-C
Q 003504 663 IKASSVYLDMNL-------EPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-G 734 (815)
Q Consensus 663 lk~~NIll~~~~-------~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g 734 (815)
|||+||+++.++ .+||+|||+++.... .....++..|+|||++......++.++|||||||++||+++ |
T Consensus 127 lkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~ 203 (259)
T cd05037 127 VCGKNILVARYGLNEGYVPFIKLSDPGIPITVLS---REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNG 203 (259)
T ss_pred CccceEEEecCccccCCceeEEeCCCCccccccc---ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCC
Confidence 999999999887 799999999987643 22344677899999987663337889999999999999999 5
Q ss_pred CCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 003504 735 KKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLK 809 (815)
Q Consensus 735 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~ 809 (815)
..||......+ +........ . . +.....++.+++.+||..+|.+||++.+|++.|+
T Consensus 204 ~~p~~~~~~~~-------~~~~~~~~~---~-----~----~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 204 EEPLSTLSSSE-------KERFYQDQH---R-----L----PMPDCAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred CCCcccCCchh-------HHHHHhcCC---C-----C----CCCCchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 77776432211 111111000 0 0 0111167899999999999999999999999874
No 237
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=2.3e-35 Score=312.73 Aligned_cols=265 Identities=24% Similarity=0.310 Sum_probs=200.7
Q ss_pred cCCCCCCeecccCCeeeEEEEcC-CCcEEEEEEeecCC--cccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEE
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFLP-GGIHVAVKVLVHGS--TLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYD 584 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 584 (815)
++|+..+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.++++++|||++++++++......++|||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 36888899999999999999965 68899999986532 2234568899999999999999999999999999999999
Q ss_pred eCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCC
Q 003504 585 YMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIK 664 (815)
Q Consensus 585 y~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk 664 (815)
|++++.|..++.. ...+++..+..++.|++.||+||| +.+++|||||
T Consensus 81 ~~~~~~l~~~~~~------------------------------~~~~~~~~~~~~~~ql~~~l~~LH---~~~i~H~dl~ 127 (286)
T cd07847 81 YCDHTVLNELEKN------------------------------PRGVPEHLIKKIIWQTLQAVNFCH---KHNCIHRDVK 127 (286)
T ss_pred ccCccHHHHHHhC------------------------------CCCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCC
Confidence 9999988887643 224789999999999999999999 7999999999
Q ss_pred CCceEEcCCCCeeecccccceecCCCC-ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCC
Q 003504 665 ASSVYLDMNLEPRLSDFGLAKIFGNGL-DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYP 743 (815)
Q Consensus 665 ~~NIll~~~~~~kl~Dfgla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~ 743 (815)
|+||+++.++.+||+|||++....... ......++..|+|||.+.+... ++.++|||||||++|||++|+.||.+...
T Consensus 128 p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~-~~~~~Di~slG~i~~~l~~g~~p~~~~~~ 206 (286)
T cd07847 128 PENILITKQGQIKLCDFGFARILTGPGDDYTDYVATRWYRAPELLVGDTQ-YGPPVDVWAIGCVFAELLTGQPLWPGKSD 206 (286)
T ss_pred hhhEEEcCCCcEEECccccceecCCCcccccCcccccccCCHHHHhCCCC-cCchhhhHHHHHHHHHHHhCCCCCCCCCh
Confidence 999999999999999999998765433 2233457889999998765432 57899999999999999999999976433
Q ss_pred ccccccHHHHHHH-------HHhcC-CCCccccccccCCCC-----HHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 744 EEKEGNLVSWVRG-------LVRNN-KGSRAIDPKIRDTGP-----EKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 744 ~~~~~~~~~~~~~-------~~~~~-~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
.+....+...... ..... .......+......+ ...+..+.+++.+||..+|++||++.++++
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 207 VDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred HHHHHHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 2211111111000 00000 000001111110001 123567889999999999999999999875
No 238
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=7.5e-36 Score=318.82 Aligned_cols=265 Identities=21% Similarity=0.272 Sum_probs=198.9
Q ss_pred cCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCC-cccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEe
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGS-TLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDY 585 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 585 (815)
++|...+.||+|+||.||+|.. .++..||+|.+.... ......+.+|+.++++++||||+++++++......++||||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 85 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 85 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence 4688889999999999999985 467899999986432 23345678899999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCC
Q 003504 586 MENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKA 665 (815)
Q Consensus 586 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~ 665 (815)
++ ++|.+++... ...+++.....++.|++.||+||| +.+|+||||||
T Consensus 86 ~~-~~l~~~l~~~-----------------------------~~~~~~~~~~~~~~qi~~aL~~lH---~~~i~H~dlkp 132 (301)
T cd07873 86 LD-KDLKQYLDDC-----------------------------GNSINMHNVKLFLFQLLRGLNYCH---RRKVLHRDLKP 132 (301)
T ss_pred cc-cCHHHHHHhc-----------------------------CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCH
Confidence 98 5999888642 234678888999999999999999 89999999999
Q ss_pred CceEEcCCCCeeecccccceecCCCC-ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCc
Q 003504 666 SSVYLDMNLEPRLSDFGLAKIFGNGL-DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPE 744 (815)
Q Consensus 666 ~NIll~~~~~~kl~Dfgla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~ 744 (815)
+||+++.++.+||+|||++....... ......+++.|+|||.+.+... ++.++|||||||++|||++|+.||......
T Consensus 133 ~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~-~~~~~Dv~slG~~l~el~tg~~~f~~~~~~ 211 (301)
T cd07873 133 QNLLINERGELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGSTD-YSTQIDMWGVGCIFYEMSTGRPLFPGSTVE 211 (301)
T ss_pred HHEEECCCCcEEECcCcchhccCCCCCcccccceeecccCcHHHhCCCC-CccHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 99999999999999999997654322 2223457889999998765432 678999999999999999999999764332
Q ss_pred cccccHHHHH--------HHHHhcCCCCccccccccCC----CCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 745 EKEGNLVSWV--------RGLVRNNKGSRAIDPKIRDT----GPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 745 ~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
+....+.... ............-.+..... .....+..+.+++.+|+..||.+|||++++++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 212 EQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred HHHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 1111111000 00000000000001111111 01234567889999999999999999999986
No 239
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.8e-35 Score=313.57 Aligned_cols=255 Identities=23% Similarity=0.369 Sum_probs=201.7
Q ss_pred cCCCCCCeecccCCeeeEEEEcC-CCcEEEEEEeecC-CcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEe
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFLP-GGIHVAVKVLVHG-STLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDY 585 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 585 (815)
++|++.+.||+|+||.||+|... ++..||+|.+... .......+.+|++++++++||||+++++++......++||||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY 80 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence 36788899999999999999965 7899999988653 223346788999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCC
Q 003504 586 MENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKA 665 (815)
Q Consensus 586 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~ 665 (815)
+++++|..+++.. .....+++.....++.+++.||.|||+ +.+|+||||||
T Consensus 81 ~~~~~l~~~~~~~---------------------------~~~~~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p 131 (286)
T cd06622 81 MDAGSLDKLYAGG---------------------------VATEGIPEDVLRRITYAVVKGLKFLKE--EHNIIHRDVKP 131 (286)
T ss_pred cCCCCHHHHHHhc---------------------------cccCCCCHHHHHHHHHHHHHHHHHHHh--cCCEeeCCCCH
Confidence 9999999998642 112357889999999999999999994 35899999999
Q ss_pred CceEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCCC----CCCCCcCcchhHHHHHHHHHhCCCCCCCC
Q 003504 666 SSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDS----DFPTPKSDVYCYGVVLLELITGKKPLGDD 741 (815)
Q Consensus 666 ~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~ 741 (815)
+||+++.++.+||+|||++....... .....|+..|+|||.+.+.. ..++.++|||||||++||+++|+.||...
T Consensus 132 ~nil~~~~~~~~l~dfg~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 210 (286)
T cd06622 132 TNVLVNGNGQVKLCDFGVSGNLVASL-AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPE 210 (286)
T ss_pred HHEEECCCCCEEEeecCCcccccCCc-cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCc
Confidence 99999999999999999998664332 23345888999999875432 12478999999999999999999999642
Q ss_pred CCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 742 YPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 742 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
.. .............. ....+...+.++.+++.+||..+|++||++++++.
T Consensus 211 ~~----~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 261 (286)
T cd06622 211 TY----ANIFAQLSAIVDGD----------PPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLE 261 (286)
T ss_pred ch----hhHHHHHHHHhhcC----------CCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhc
Confidence 21 11111111111110 11123446778899999999999999999999986
No 240
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=1.2e-35 Score=308.96 Aligned_cols=247 Identities=27% Similarity=0.416 Sum_probs=197.4
Q ss_pred cCCCCCCeecccCCeeeEEEEcCCCcEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeCC
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYME 587 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 587 (815)
++|++.+.||+|+||.||+|.. .+..||+|.++.. ...+.+.+|+.++.+++|||++++++++... ..++||||++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~--~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~ 81 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCD--VTAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMS 81 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCc--chHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCC
Confidence 4588899999999999999975 5778999998642 2346788999999999999999999998654 5789999999
Q ss_pred CCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCc
Q 003504 588 NGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASS 667 (815)
Q Consensus 588 ~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~N 667 (815)
+|+|.+++... ....+++..+.+++.|++.||+||| +.+++||||||+|
T Consensus 82 ~~~L~~~l~~~----------------------------~~~~~~~~~~~~~~~qi~~al~~lH---~~~~~H~dl~p~n 130 (254)
T cd05083 82 KGNLVNFLRTR----------------------------GRALVSVIQLLQFSLDVAEGMEYLE---SKKLVHRDLAARN 130 (254)
T ss_pred CCCHHHHHHhc----------------------------CcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccCcce
Confidence 99999999752 1234678889999999999999999 8999999999999
Q ss_pred eEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCCccc
Q 003504 668 VYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GKKPLGDDYPEEK 746 (815)
Q Consensus 668 Ill~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~~~ 746 (815)
|+++.++.+||+|||++....... .....+..|+|||.+.+.. ++.++|||||||++|||++ |+.||......
T Consensus 131 ili~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~~y~~pe~~~~~~--~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~-- 204 (254)
T cd05083 131 ILVSEDGVAKVSDFGLARVGSMGV--DNSKLPVKWTAPEALKHKK--FSSKSDVWSYGVLLWEVFSYGRAPYPKMSLK-- 204 (254)
T ss_pred EEEcCCCcEEECCCccceeccccC--CCCCCCceecCHHHhccCC--cCchhhHHHHHHHHHHHHhCCCCCCccCCHH--
Confidence 999999999999999997654321 2223456899999887655 6889999999999999998 99998653221
Q ss_pred cccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHh
Q 003504 747 EGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKD 810 (815)
Q Consensus 747 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~ 810 (815)
..... .... .....+...+.++.+++.+||+.+|++||+++++++.|++
T Consensus 205 -----~~~~~-~~~~---------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 205 -----EVKEC-VEKG---------YRMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred -----HHHHH-HhCC---------CCCCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 11111 1111 1111123456778899999999999999999999998863
No 241
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1.6e-35 Score=310.62 Aligned_cols=253 Identities=23% Similarity=0.325 Sum_probs=198.6
Q ss_pred cCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeC
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYM 586 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 586 (815)
++|...+.||+|+||.||+|+. .+++.||+|.++.........+.+|+.+++.++||||+++++++...+..++|+||+
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~ 88 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC 88 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence 4667778999999999999985 568899999987654444556889999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCC
Q 003504 587 ENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKAS 666 (815)
Q Consensus 587 ~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~ 666 (815)
++|+|.+++.. ...+++.....++.|++.||+||| +.+++||||||+
T Consensus 89 ~~~~L~~~~~~------------------------------~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~ 135 (267)
T cd06645 89 GGGSLQDIYHV------------------------------TGPLSESQIAYVSRETLQGLYYLH---SKGKMHRDIKGA 135 (267)
T ss_pred CCCcHHHHHHh------------------------------cCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHH
Confidence 99999999864 224678889999999999999999 789999999999
Q ss_pred ceEEcCCCCeeecccccceecCCCC-ccccccccccccCCcccCCC-CCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCc
Q 003504 667 SVYLDMNLEPRLSDFGLAKIFGNGL-DEEIARGSPGYIPPEFAQPD-SDFPTPKSDVYCYGVVLLELITGKKPLGDDYPE 744 (815)
Q Consensus 667 NIll~~~~~~kl~Dfgla~~~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~ 744 (815)
||+++.++.+||+|||++....... ......|+..|+|||++... ...++.++|||||||++|||++|+.||....+.
T Consensus 136 nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~ 215 (267)
T cd06645 136 NILLTDNGHVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPM 215 (267)
T ss_pred HEEECCCCCEEECcceeeeEccCcccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccch
Confidence 9999999999999999987654322 22344689999999987422 223688999999999999999999998653321
Q ss_pred cccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 745 EKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
.. +. ...... ...+.... ....+..+.+++.+|++.+|++||+++++++
T Consensus 216 ~~---~~----~~~~~~----~~~~~~~~--~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 216 RA---LF----LMTKSN----FQPPKLKD--KMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred hh---HH----hhhccC----CCCCcccc--cCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 11 00 001110 11111110 1123456889999999999999999999875
No 242
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=6.5e-36 Score=315.32 Aligned_cols=244 Identities=24% Similarity=0.360 Sum_probs=197.5
Q ss_pred CCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCC-cccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeCC
Q 003504 510 FDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGS-TLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYME 587 (815)
Q Consensus 510 ~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 587 (815)
|+..+.||+|+||.||+|.. .++..||+|.+.... ....+.+.+|++++++++||||+++++++......++||||++
T Consensus 6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06642 6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLG 85 (277)
T ss_pred HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccC
Confidence 44567899999999999985 467889999886432 2334578899999999999999999999999999999999999
Q ss_pred CCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCc
Q 003504 588 NGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASS 667 (815)
Q Consensus 588 ~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~N 667 (815)
+|+|.+++.. ..+++.....++.|++.|+.||| +.+++|+||+|+|
T Consensus 86 ~~~L~~~~~~-------------------------------~~~~~~~~~~~~~~i~~~l~~lH---~~~ivH~dl~p~n 131 (277)
T cd06642 86 GGSALDLLKP-------------------------------GPLEETYIATILREILKGLDYLH---SERKIHRDIKAAN 131 (277)
T ss_pred CCcHHHHhhc-------------------------------CCCCHHHHHHHHHHHHHHHHHHh---cCCeeccCCChhe
Confidence 9999998853 24678888999999999999999 8899999999999
Q ss_pred eEEcCCCCeeecccccceecCCCC-ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCccc
Q 003504 668 VYLDMNLEPRLSDFGLAKIFGNGL-DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEK 746 (815)
Q Consensus 668 Ill~~~~~~kl~Dfgla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~ 746 (815)
|++++++.+||+|||++....... ......|+..|+|||.+.+.. ++.++|||||||++||+++|+.||....+...
T Consensus 132 i~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~ 209 (277)
T cd06642 132 VLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSA--YDFKADIWSLGITAIELAKGEPPNSDLHPMRV 209 (277)
T ss_pred EEEeCCCCEEEccccccccccCcchhhhcccCcccccCHHHhCcCC--CchhhhHHHHHHHHHHHHhCCCCCcccchhhH
Confidence 999999999999999998765432 223345788999999987665 68899999999999999999999875332111
Q ss_pred cccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 747 EGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 747 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
. . .... ......+...+.++.+++.+||+.+|++||+|.++++
T Consensus 210 ----~---~-~~~~---------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 252 (277)
T cd06642 210 ----L---F-LIPK---------NSPPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLK 252 (277)
T ss_pred ----H---h-hhhc---------CCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 0 0 0111 1111123345677899999999999999999999987
No 243
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.5e-35 Score=325.08 Aligned_cols=262 Identities=19% Similarity=0.206 Sum_probs=196.5
Q ss_pred hcCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCC--cccHHHHHHHHHHhcCCCCCCceeeeeEEEeC------C
Q 003504 507 TSNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGS--TLTDQEAARELEYLGRIKHPNLVPLTGYCIAG------D 577 (815)
Q Consensus 507 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~------~ 577 (815)
.++|...+.||+|+||.||+|.. ..++.||||++.... ....+.+.+|+.+++.++||||+++++++... .
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~ 102 (364)
T cd07875 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 102 (364)
T ss_pred hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccC
Confidence 46799999999999999999984 468899999986532 23345678999999999999999999987643 3
Q ss_pred eeEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCC
Q 003504 578 QRIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPP 657 (815)
Q Consensus 578 ~~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ 657 (815)
..++||||+++ +|.+++.. .+++..+..++.|++.||+||| +.+
T Consensus 103 ~~~lv~e~~~~-~l~~~~~~--------------------------------~~~~~~~~~~~~qi~~aL~~LH---~~~ 146 (364)
T cd07875 103 DVYIVMELMDA-NLCQVIQM--------------------------------ELDHERMSYLLYQMLCGIKHLH---SAG 146 (364)
T ss_pred eEEEEEeCCCC-CHHHHHHh--------------------------------cCCHHHHHHHHHHHHHHHHHHh---hCC
Confidence 56999999976 67776642 2567788899999999999999 899
Q ss_pred eeeccCCCCceEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCC
Q 003504 658 IIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKP 737 (815)
Q Consensus 658 ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p 737 (815)
|+||||||+||+++.++.+||+|||+++............||..|+|||++.+.. ++.++|||||||++|||++|+.|
T Consensus 147 ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~--~~~~~DiwSlG~il~ell~g~~p 224 (364)
T cd07875 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG--YKENVDIWSVGCIMGEMIKGGVL 224 (364)
T ss_pred eecCCCCHHHEEECCCCcEEEEeCCCccccCCCCcccCCcccCCcCCHHHHhCCC--CCchhhHHhHHHHHHHHHhCCCC
Confidence 9999999999999999999999999998765544445567899999999997765 78899999999999999999999
Q ss_pred CCCCCCccccccHHH---------------HHHHHHhcCCC-Ccc----cccccc----CCCCHHHHHHHHHHHhhcccc
Q 003504 738 LGDDYPEEKEGNLVS---------------WVRGLVRNNKG-SRA----IDPKIR----DTGPEKQMEEALKIGYLCTAD 793 (815)
Q Consensus 738 ~~~~~~~~~~~~~~~---------------~~~~~~~~~~~-~~~----~~~~~~----~~~~~~~~~~~~~l~~~Cl~~ 793 (815)
|......+....+.. .+......... ... ..+... .........++.+++.+|++.
T Consensus 225 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~ 304 (364)
T cd07875 225 FPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVI 304 (364)
T ss_pred CCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCc
Confidence 975432211111100 00111111000 000 000000 000112345788999999999
Q ss_pred CCCCCCCHHHHHH
Q 003504 794 LPLKRPSMQQIVG 806 (815)
Q Consensus 794 dP~~RPs~~~v~~ 806 (815)
||++|||+.|+++
T Consensus 305 dP~~R~t~~e~L~ 317 (364)
T cd07875 305 DASKRISVDEALQ 317 (364)
T ss_pred CcccCCCHHHHhc
Confidence 9999999999986
No 244
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=1.3e-35 Score=320.79 Aligned_cols=261 Identities=21% Similarity=0.226 Sum_probs=192.6
Q ss_pred CCCeeccc--CCeeeEEEEc-CCCcEEEEEEeecCCc--ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeC
Q 003504 512 RGTLLAEG--KFGPVYRGFL-PGGIHVAVKVLVHGST--LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYM 586 (815)
Q Consensus 512 ~~~~ig~G--~~g~Vy~~~~-~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 586 (815)
+.++||+| +||+||++.. .+|..||||++..... ...+.+.+|+++++.++||||+++++++...+..++|+||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 35789999 6789999985 6789999999865322 22346778999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCC
Q 003504 587 ENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKAS 666 (815)
Q Consensus 587 ~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~ 666 (815)
++|+|.+++... ....+++..+..++.|++.||+||| +.+|+||||||+
T Consensus 82 ~~~~l~~~~~~~----------------------------~~~~l~~~~~~~i~~qi~~~L~~LH---~~~iiH~dlkp~ 130 (327)
T cd08227 82 AYGSAKDLICTH----------------------------FMDGMSELAIAYILQGVLKALDYIH---HMGYVHRSVKAS 130 (327)
T ss_pred CCCcHHHHHHhh----------------------------ccCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCChh
Confidence 999999999642 1224788899999999999999999 889999999999
Q ss_pred ceEEcCCCCeeecccccceecCC-CC-------ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCC
Q 003504 667 SVYLDMNLEPRLSDFGLAKIFGN-GL-------DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738 (815)
Q Consensus 667 NIll~~~~~~kl~Dfgla~~~~~-~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~ 738 (815)
||+++.++.++++||+.+..... +. ......++..|+|||++......++.++|||||||++|||++|+.||
T Consensus 131 Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf 210 (327)
T cd08227 131 HILISVDGKVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPF 210 (327)
T ss_pred hEEEecCCcEEEcccchhhccccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCC
Confidence 99999999999999986543321 11 11223467789999998764333688999999999999999999999
Q ss_pred CCCCCccccccHHHHHHHHHh----------c----CCCCccccccc-----------------cCCCCHHHHHHHHHHH
Q 003504 739 GDDYPEEKEGNLVSWVRGLVR----------N----NKGSRAIDPKI-----------------RDTGPEKQMEEALKIG 787 (815)
Q Consensus 739 ~~~~~~~~~~~~~~~~~~~~~----------~----~~~~~~~~~~~-----------------~~~~~~~~~~~~~~l~ 787 (815)
........ .......... + .......+... ..........++.+++
T Consensus 211 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 287 (327)
T cd08227 211 KDMPATQM---LLEKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFV 287 (327)
T ss_pred CCcchhHH---HHHHhcCCccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHH
Confidence 75321110 0000000000 0 00000000000 0001223456889999
Q ss_pred hhccccCCCCCCCHHHHHH
Q 003504 788 YLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 788 ~~Cl~~dP~~RPs~~~v~~ 806 (815)
.+||+.||++|||++++++
T Consensus 288 ~~~l~~dP~~Rpt~~ell~ 306 (327)
T cd08227 288 EQCLQRNPDARPSASTLLN 306 (327)
T ss_pred HHHHhhCchhcCCHHHHhc
Confidence 9999999999999999986
No 245
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=1.2e-35 Score=311.85 Aligned_cols=252 Identities=28% Similarity=0.425 Sum_probs=197.0
Q ss_pred CeecccCCeeeEEEEcCC-------CcEEEEEEeecCC-cccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEe
Q 003504 514 TLLAEGKFGPVYRGFLPG-------GIHVAVKVLVHGS-TLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDY 585 (815)
Q Consensus 514 ~~ig~G~~g~Vy~~~~~~-------~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 585 (815)
+.||+|+||.||+|+..+ +..||||.+.... ......+.+|+.++++++||||+++++++...+..++||||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 368999999999998642 2579999886543 23456788999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCC
Q 003504 586 MENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKA 665 (815)
Q Consensus 586 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~ 665 (815)
+++|+|.++++..... ......++|..++.++.|++.||+||| +.+++||||||
T Consensus 81 ~~~~~L~~~l~~~~~~-----------------------~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p 134 (269)
T cd05044 81 MEGGDLLSYLRDARVE-----------------------RFGPPLLTLKELLDICLDVAKGCVYLE---QMHFIHRDLAA 134 (269)
T ss_pred cCCCcHHHHHHHhhhc-----------------------ccCCccccHHHHHHHHHHHHHHHHHHH---hCCcccCCCCh
Confidence 9999999999753110 001234788999999999999999999 78999999999
Q ss_pred CceEEcCCC-----CeeecccccceecCCCCc---cccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CCC
Q 003504 666 SSVYLDMNL-----EPRLSDFGLAKIFGNGLD---EEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GKK 736 (815)
Q Consensus 666 ~NIll~~~~-----~~kl~Dfgla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~ 736 (815)
+||+++.++ .+|++|||+++....... .....++..|+|||++.... ++.++|||||||++|||++ |+.
T Consensus 135 ~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~Dv~slG~il~ellt~g~~ 212 (269)
T cd05044 135 RNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGK--FTTQSDVWSFGVLMWEILTLGQQ 212 (269)
T ss_pred heEEEecCCCCCCcceEECCcccccccccccccccCcccCCCccccCHHHHccCC--cccchhHHHHHHHHHHHHHcCCC
Confidence 999999877 899999999976543221 12223567899999987665 7899999999999999998 999
Q ss_pred CCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHh
Q 003504 737 PLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKD 810 (815)
Q Consensus 737 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~ 810 (815)
||..... ......+ ... .....+...+..+.+++.+||..+|++||++.++++.|++
T Consensus 213 p~~~~~~----~~~~~~~----~~~---------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 213 PYPALNN----QEVLQHV----TAG---------GRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred CCcccCH----HHHHHHH----hcC---------CccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 9864321 1111111 111 1111233456788999999999999999999999999864
No 246
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=3.9e-36 Score=329.14 Aligned_cols=249 Identities=22% Similarity=0.261 Sum_probs=192.2
Q ss_pred cCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCC---cccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEE
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGS---TLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIY 583 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 583 (815)
++|+..+.||+|+||.||+|+. .+++.||||+++... ......+.+|+.++.+++||||+++++++.+.+..++||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 3688889999999999999985 468899999997532 222356788999999999999999999999999999999
Q ss_pred EeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccC
Q 003504 584 DYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDI 663 (815)
Q Consensus 584 ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDl 663 (815)
||+++|+|.+++.. ...++......++.|++.||+||| +.+|+||||
T Consensus 81 E~~~gg~L~~~l~~------------------------------~~~l~~~~~~~~~~qi~~~L~~lH---~~givHrDL 127 (360)
T cd05627 81 EFLPGGDMMTLLMK------------------------------KDTLSEEATQFYIAETVLAIDAIH---QLGFIHRDI 127 (360)
T ss_pred eCCCCccHHHHHHh------------------------------cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEccCC
Confidence 99999999999964 224677788899999999999999 899999999
Q ss_pred CCCceEEcCCCCeeecccccceecCCCC------------------------------------ccccccccccccCCcc
Q 003504 664 KASSVYLDMNLEPRLSDFGLAKIFGNGL------------------------------------DEEIARGSPGYIPPEF 707 (815)
Q Consensus 664 k~~NIll~~~~~~kl~Dfgla~~~~~~~------------------------------------~~~~~~gt~~y~aPE~ 707 (815)
||+|||++.++.+||+|||+++...... .....+||+.|+|||+
T Consensus 128 kp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~ 207 (360)
T cd05627 128 KPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEV 207 (360)
T ss_pred CHHHEEECCCCCEEEeeccCCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHH
Confidence 9999999999999999999987543210 0113469999999999
Q ss_pred cCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHH
Q 003504 708 AQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIG 787 (815)
Q Consensus 708 ~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 787 (815)
+.+.. ++.++|||||||++|||++|+.||....+.+.. ..... ....-.+.+. ...+.++.+++
T Consensus 208 ~~~~~--~~~~~DiwSlGvilyel~tG~~Pf~~~~~~~~~-------~~i~~-~~~~~~~p~~------~~~s~~~~~li 271 (360)
T cd05627 208 FMQTG--YNKLCDWWSLGVIMYEMLIGYPPFCSETPQETY-------RKVMN-WKETLVFPPE------VPISEKAKDLI 271 (360)
T ss_pred HcCCC--CCCcceeccccceeeecccCCCCCCCCCHHHHH-------HHHHc-CCCceecCCC------CCCCHHHHHHH
Confidence 87765 788999999999999999999999764432221 11111 0000011111 11344667777
Q ss_pred hhccccCCCCCCC---HHHHHH
Q 003504 788 YLCTADLPLKRPS---MQQIVG 806 (815)
Q Consensus 788 ~~Cl~~dP~~RPs---~~~v~~ 806 (815)
.+++ .||.+|++ ++++++
T Consensus 272 ~~l~-~~p~~R~~~~~~~ei~~ 292 (360)
T cd05627 272 LRFC-TDSENRIGSNGVEEIKS 292 (360)
T ss_pred HHhc-cChhhcCCCCCHHHHhc
Confidence 7766 49999995 555543
No 247
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-36 Score=345.65 Aligned_cols=270 Identities=28% Similarity=0.414 Sum_probs=211.2
Q ss_pred hcCCCCCCeecccCCeeeEEEEcC--------CCcEEEEEEeecCCc-ccHHHHHHHHHHhcCC-CCCCceeeeeEEEeC
Q 003504 507 TSNFDRGTLLAEGKFGPVYRGFLP--------GGIHVAVKVLVHGST-LTDQEAARELEYLGRI-KHPNLVPLTGYCIAG 576 (815)
Q Consensus 507 ~~~~~~~~~ig~G~~g~Vy~~~~~--------~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~ 576 (815)
.++..+.+.+|+|+||.|++|... ....||||.++.... ...+.+..|+++|..+ +||||+.++|+|...
T Consensus 295 ~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~ 374 (609)
T KOG0200|consen 295 RENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQD 374 (609)
T ss_pred hhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccC
Confidence 344455679999999999999842 145799999976533 3456899999999999 699999999999999
Q ss_pred CeeEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCC
Q 003504 577 DQRIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSP 656 (815)
Q Consensus 577 ~~~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~ 656 (815)
...++|.||+..|+|.++|+..+. .. ...... ....+...+.....+.++.|||.||+||+ +.
T Consensus 375 ~~~~~v~Ey~~~G~L~~~Lr~~r~--~~-------~~~~~~-----~~~~~~~~L~~~dLlsfa~QIa~GMe~L~---~~ 437 (609)
T KOG0200|consen 375 GPLYVIVEYAEHGDLLEFLRKKRV--TE-------SIDGSG-----VFPNERDALTTKDLLSFAYQIANGMEYLA---SV 437 (609)
T ss_pred CceEEEEEeccCCcHHHHHHhccc--cc-------cccccC-----CCccccCCcCHHHHHHHHHHHHHHHHHHh---hC
Confidence 999999999999999999987540 00 000000 00011135888999999999999999999 89
Q ss_pred CeeeccCCCCceEEcCCCCeeecccccceecCCCCccc--cccc--cccccCCcccCCCCCCCCCcCcchhHHHHHHHHH
Q 003504 657 PIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEE--IARG--SPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELI 732 (815)
Q Consensus 657 ~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~--~~~g--t~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~ 732 (815)
++|||||.++|||+..+..+||+|||+|+......... ...| ...|||||.+.... ++.|+|||||||+|||++
T Consensus 438 ~~vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~--ft~kSDVWSfGI~L~Eif 515 (609)
T KOG0200|consen 438 PCVHRDLAARNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRV--FTSKSDVWSFGILLWEIF 515 (609)
T ss_pred CccchhhhhhhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCc--ccccchhhHHHHHHHHHh
Confidence 99999999999999999999999999999765443222 1222 34599999998755 899999999999999999
Q ss_pred h-CCCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhh
Q 003504 733 T-GKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDI 811 (815)
Q Consensus 733 t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 811 (815)
| |..||.+-.+ ..++.++ +.++.+...|..+..++.++|+.||+.+|++||++.++.+.++..
T Consensus 516 sLG~~PYp~~~~---~~~l~~~-------------l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~ 579 (609)
T KOG0200|consen 516 TLGGTPYPGIPP---TEELLEF-------------LKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKH 579 (609)
T ss_pred hCCCCCCCCCCc---HHHHHHH-------------HhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence 9 9999975211 1112211 233455566888899999999999999999999999999999874
No 248
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=2.9e-35 Score=306.44 Aligned_cols=248 Identities=21% Similarity=0.315 Sum_probs=201.0
Q ss_pred CCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCC--cccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEe
Q 003504 509 NFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGS--TLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDY 585 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 585 (815)
+|+..+.||+|+||.||+|.. .++..+|||.+.... ......+.+|++++++++||||+++++.+...+..++||||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 477789999999999999985 568899999986542 23356788999999999999999999999988999999999
Q ss_pred CCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCC
Q 003504 586 MENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKA 665 (815)
Q Consensus 586 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~ 665 (815)
+++++|.+++... ....+++..+.+++.+++.||+||| +.+++||||+|
T Consensus 81 ~~~~~L~~~~~~~----------------------------~~~~~~~~~~~~~~~~i~~~l~~lh---~~~i~h~dl~~ 129 (256)
T cd08220 81 APGGTLAEYIQKR----------------------------CNSLLDEDTILHFFVQILLALHHVH---TKLILHRDLKT 129 (256)
T ss_pred CCCCCHHHHHHHh----------------------------cccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCH
Confidence 9999999999752 1335788889999999999999999 89999999999
Q ss_pred CceEEcCC-CCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCc
Q 003504 666 SSVYLDMN-LEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPE 744 (815)
Q Consensus 666 ~NIll~~~-~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~ 744 (815)
+||+++.+ +.+||+|||.+.............|+..|+|||.+.... ++.++||||||+++|++++|+.||......
T Consensus 130 ~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~ 207 (256)
T cd08220 130 QNILLDKHKMVVKIGDFGISKILSSKSKAYTVVGTPCYISPELCEGKP--YNQKSDIWALGCVLYELASLKRAFEAANLP 207 (256)
T ss_pred HHEEEcCCCCEEEEccCCCceecCCCccccccccCCcccCchhccCCC--CCcccchHHHHHHHHHHHhCCCCcccCchH
Confidence 99999855 468999999998776544444456889999999987655 688999999999999999999998653221
Q ss_pred cccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 745 EKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
..+....... ....+...+.++.+++.+||..+|++||++.|+++
T Consensus 208 -------~~~~~~~~~~----------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 208 -------ALVLKIMSGT----------FAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred -------HHHHHHHhcC----------CCCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 1122221111 00112335567889999999999999999999985
No 249
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.5e-35 Score=327.81 Aligned_cols=258 Identities=22% Similarity=0.202 Sum_probs=196.8
Q ss_pred cCCCCCCeecccCCeeeEEEEcC---CCcEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEE
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFLP---GGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYD 584 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~~---~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 584 (815)
.+|.+.+.||+|+||.||+|... .+..||||.+... ....+|++++++++||||+++++++......++|||
T Consensus 92 ~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e 166 (392)
T PHA03207 92 MQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMP 166 (392)
T ss_pred CceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEeh
Confidence 47889999999999999999743 3578999987542 345689999999999999999999999999999999
Q ss_pred eCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCC
Q 003504 585 YMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIK 664 (815)
Q Consensus 585 y~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk 664 (815)
|+. ++|.+++.. ...+++..+..++.|++.||+||| +.+|||||||
T Consensus 167 ~~~-~~l~~~l~~------------------------------~~~l~~~~~~~i~~ql~~aL~~LH---~~givHrDlk 212 (392)
T PHA03207 167 KYK-CDLFTYVDR------------------------------SGPLPLEQAITIQRRLLEALAYLH---GRGIIHRDVK 212 (392)
T ss_pred hcC-CCHHHHHHh------------------------------cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCC
Confidence 996 588888843 235789999999999999999999 8899999999
Q ss_pred CCceEEcCCCCeeecccccceecCCCCc---cccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCC
Q 003504 665 ASSVYLDMNLEPRLSDFGLAKIFGNGLD---EEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDD 741 (815)
Q Consensus 665 ~~NIll~~~~~~kl~Dfgla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~ 741 (815)
|+|||++.++.+||+|||+++....... .....||+.|+|||++.... ++.++|||||||++|||++|+.||.+.
T Consensus 213 p~Nill~~~~~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwslGvil~el~~g~~pf~~~ 290 (392)
T PHA03207 213 TENIFLDEPENAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLALDP--YCAKTDIWSAGLVLFEMSVKNVTLFGK 290 (392)
T ss_pred HHHEEEcCCCCEEEccCccccccCcccccccccccccccCccCHhHhcCCC--CCchhhHHHHHHHHHHHHHCCCCCCCC
Confidence 9999999999999999999986654321 22446999999999987766 788999999999999999999999764
Q ss_pred CCccccccHHHHHHHHHhcCCC-----------------CccccccccCC---CCHHHHHHHHHHHhhccccCCCCCCCH
Q 003504 742 YPEEKEGNLVSWVRGLVRNNKG-----------------SRAIDPKIRDT---GPEKQMEEALKIGYLCTADLPLKRPSM 801 (815)
Q Consensus 742 ~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~---~~~~~~~~~~~l~~~Cl~~dP~~RPs~ 801 (815)
........+...++. ...... .....+..... .......++.+++.+|+..||++||++
T Consensus 291 ~~~~~~~~l~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa 369 (392)
T PHA03207 291 QVKSSSSQLRSIIRC-MQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSA 369 (392)
T ss_pred CCCCcHHHHHHHHHH-hccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCH
Confidence 433222222211111 100000 00000000000 001234567889999999999999999
Q ss_pred HHHHHH
Q 003504 802 QQIVGL 807 (815)
Q Consensus 802 ~~v~~~ 807 (815)
.+++..
T Consensus 370 ~e~l~~ 375 (392)
T PHA03207 370 QDILSL 375 (392)
T ss_pred HHHhhC
Confidence 999753
No 250
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=3.3e-35 Score=317.68 Aligned_cols=255 Identities=22% Similarity=0.246 Sum_probs=194.0
Q ss_pred cCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecC---CcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEE
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHG---STLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIY 583 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 583 (815)
++|++.+.||+|+||.||+|+. .+++.||||++.+. .....+.+.+|+.++..++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 3688899999999999999995 56889999998642 1223456888999999999999999999999999999999
Q ss_pred EeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccC
Q 003504 584 DYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDI 663 (815)
Q Consensus 584 ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDl 663 (815)
||+++|+|.+++... ...++......++.|++.||+||| +.+|+||||
T Consensus 81 e~~~g~~L~~~l~~~-----------------------------~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dl 128 (331)
T cd05597 81 DYYVGGDLLTLLSKF-----------------------------EDRLPEDMARFYLAEMVLAIDSVH---QLGYVHRDI 128 (331)
T ss_pred ecCCCCcHHHHHHHh-----------------------------cCCCCHHHHHHHHHHHHHHHHHHH---hCCeEECCC
Confidence 999999999999642 224667778889999999999999 899999999
Q ss_pred CCCceEEcCCCCeeecccccceecCCCCc--cccccccccccCCcccCCC---CCCCCCcCcchhHHHHHHHHHhCCCCC
Q 003504 664 KASSVYLDMNLEPRLSDFGLAKIFGNGLD--EEIARGSPGYIPPEFAQPD---SDFPTPKSDVYCYGVVLLELITGKKPL 738 (815)
Q Consensus 664 k~~NIll~~~~~~kl~Dfgla~~~~~~~~--~~~~~gt~~y~aPE~~~~~---~~~~~~~~Dv~S~Gvvl~el~tg~~p~ 738 (815)
||+|||++.++.+||+|||++........ .....||+.|+|||++... ...++.++|||||||++|||++|+.||
T Consensus 129 kp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf 208 (331)
T cd05597 129 KPDNVLLDKNGHIRLADFGSCLRLLADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPF 208 (331)
T ss_pred CHHHEEECCCCCEEEEECCceeecCCCCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCC
Confidence 99999999999999999999976643322 2234699999999998642 223678999999999999999999999
Q ss_pred CCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhcccc--CCCCCCCHHHHHHH
Q 003504 739 GDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTAD--LPLKRPSMQQIVGL 807 (815)
Q Consensus 739 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~--dP~~RPs~~~v~~~ 807 (815)
..... ............... +.+ .....+.++.+++.+|+.. ++..||+++++++.
T Consensus 209 ~~~~~-------~~~~~~i~~~~~~~~-~~~-----~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 209 YAESL-------VETYGKIMNHKEHFQ-FPP-----DVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred CCCCH-------HHHHHHHHcCCCccc-CCC-----ccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 75322 111222221111111 011 0112455677777776644 34448899888754
No 251
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=1.8e-35 Score=311.69 Aligned_cols=260 Identities=26% Similarity=0.326 Sum_probs=201.9
Q ss_pred cCCCCCCeecccCCeeeEEEEcC------CCcEEEEEEeecCCcc-cHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeE
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFLP------GGIHVAVKVLVHGSTL-TDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRI 580 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 580 (815)
++|+..+.||+|+||.||+|+.. +...||+|.+...... ..+.+.+|++++++++||||+++++++.+.+..+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 46888899999999999999853 3467999988654333 3467899999999999999999999999988999
Q ss_pred EEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeee
Q 003504 581 AIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIH 660 (815)
Q Consensus 581 lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivH 660 (815)
+||||+++|+|.++++...... .......+++..+..++.|++.||+||| +.+|+|
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~---------------------~~~~~~~l~~~~~~~~~~~l~~~l~~LH---~~~i~H 140 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKD---------------------EKLKPPPLSTKQKVALCTQIALGMDHLS---NARFVH 140 (275)
T ss_pred EEEEecCCCcHHHHHHhccccc---------------------ccccccCCCHHHHHHHHHHHHHHHHHhh---hcCccc
Confidence 9999999999999997532110 0011235889999999999999999999 889999
Q ss_pred ccCCCCceEEcCCCCeeecccccceecCCCC--ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CCCC
Q 003504 661 RDIKASSVYLDMNLEPRLSDFGLAKIFGNGL--DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GKKP 737 (815)
Q Consensus 661 rDlk~~NIll~~~~~~kl~Dfgla~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p 737 (815)
|||||+||+++.++.++++|||+++...... ......++..|+|||.+.... .+.++||||||+++||+++ |..|
T Consensus 141 ~dlkp~Nili~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~--~~~~~Di~slG~~l~~l~~~~~~p 218 (275)
T cd05046 141 RDLAARNCLVSSQREVKVSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDD--FSTKSDVWSFGVLMWEVFTQGELP 218 (275)
T ss_pred CcCccceEEEeCCCcEEEcccccccccCcccccccCCceeEEeecChhhhccCC--CCchhhHHHHHHHHHHHHhCCCCC
Confidence 9999999999999999999999987543221 222334677899999887655 6889999999999999999 7888
Q ss_pred CCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 003504 738 LGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLK 809 (815)
Q Consensus 738 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~ 809 (815)
|..... ..+. .... ..... ...+...+.++.+++.+||+.+|++||++.++++.|.
T Consensus 219 ~~~~~~----~~~~---~~~~-~~~~~--------~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 219 FYGLSD----EEVL---NRLQ-AGKLE--------LPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred ccccch----HHHH---HHHH-cCCcC--------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 864221 1111 1111 11100 0112234568999999999999999999999999885
No 252
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=3.9e-35 Score=307.44 Aligned_cols=247 Identities=24% Similarity=0.355 Sum_probs=192.6
Q ss_pred cCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCc-----ccHHHHHHHHHHhcCCCCCCceeeeeEEEeC--Cee
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGST-----LTDQEAARELEYLGRIKHPNLVPLTGYCIAG--DQR 579 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~-----~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~ 579 (815)
.+|+..+.||+|+||.||+|.. .++..||+|.+..... .....+.+|+.++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 3688899999999999999985 4688999998864321 1234678899999999999999999988763 567
Q ss_pred EEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCee
Q 003504 580 IAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPII 659 (815)
Q Consensus 580 ~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~iv 659 (815)
++++||+++++|.+++.. ...+++.....++.|++.||+||| +.+|+
T Consensus 82 ~l~~e~~~~~~L~~~l~~------------------------------~~~l~~~~~~~~~~qi~~~l~~LH---~~~i~ 128 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKA------------------------------YGALTESVTRKYTRQILEGMSYLH---SNMIV 128 (266)
T ss_pred EEEEeCCCCCcHHHHHHH------------------------------cCCCCHHHHHHHHHHHHHHHHHHH---hCCee
Confidence 899999999999999964 224678888899999999999999 88999
Q ss_pred eccCCCCceEEcCCCCeeecccccceecCCCC----ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCC
Q 003504 660 HRDIKASSVYLDMNLEPRLSDFGLAKIFGNGL----DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735 (815)
Q Consensus 660 HrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~ 735 (815)
||||||+||+++.++.+||+|||+++...... ......++..|+|||.+.+.. ++.++|||||||++||+++|+
T Consensus 129 H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~Dv~slG~i~~el~~g~ 206 (266)
T cd06651 129 HRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEG--YGRKADVWSLGCTVVEMLTEK 206 (266)
T ss_pred eCCCCHHHEEECCCCCEEEccCCCccccccccccCCccccCCccccccCHHHhCCCC--CCchhhhHHHHHHHHHHHHCC
Confidence 99999999999999999999999998654211 112345788999999987655 688999999999999999999
Q ss_pred CCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 736 KPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 736 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
.||...... ......... ...+. .+......+.+++ +||..+|++||+|+||++
T Consensus 207 ~pf~~~~~~-------~~~~~~~~~-----~~~~~----~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 207 PPWAEYEAM-------AAIFKIATQ-----PTNPQ----LPSHISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred CCccccchH-------HHHHHHhcC-----CCCCC----CchhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 999743211 111111110 01111 1333445566666 688899999999999975
No 253
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=8.4e-36 Score=316.09 Aligned_cols=264 Identities=22% Similarity=0.288 Sum_probs=199.5
Q ss_pred CCCCCCeecccCCeeeEEEEcC-CCcEEEEEEeecCCcc--cHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEe
Q 003504 509 NFDRGTLLAEGKFGPVYRGFLP-GGIHVAVKVLVHGSTL--TDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDY 585 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 585 (815)
+|+..+.||+|+||.||+|... +++.||+|++...... ..+.+.+|+++++.++||||+++++++......++|+||
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 81 (286)
T cd07846 2 KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEF 81 (286)
T ss_pred ceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEec
Confidence 5778899999999999999975 5889999988653222 345688999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCC
Q 003504 586 MENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKA 665 (815)
Q Consensus 586 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~ 665 (815)
+++++|.++... ...++|..+..++.|++.||+||| +.+++||||+|
T Consensus 82 ~~~~~l~~~~~~------------------------------~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~h~~l~p 128 (286)
T cd07846 82 VDHTVLDDLEKY------------------------------PNGLDESRVRKYLFQILRGIEFCH---SHNIIHRDIKP 128 (286)
T ss_pred CCccHHHHHHhc------------------------------cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCH
Confidence 999999887653 224789999999999999999999 78999999999
Q ss_pred CceEEcCCCCeeecccccceecCCCC-ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCc
Q 003504 666 SSVYLDMNLEPRLSDFGLAKIFGNGL-DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPE 744 (815)
Q Consensus 666 ~NIll~~~~~~kl~Dfgla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~ 744 (815)
+||++++++.+||+|||++....... ......++..|+|||++.+... ++.++|||||||++|||++|+.||......
T Consensus 129 ~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~~Dv~slG~~l~el~~g~~~~~~~~~~ 207 (286)
T cd07846 129 ENILVSQSGVVKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLVGDTK-YGRAVDIWAVGCLVTEMLTGEPLFPGDSDI 207 (286)
T ss_pred HHEEECCCCcEEEEeeeeeeeccCCccccCcccceeeccCcHHhccccc-cCchHhHHHHHHHHHHHHcCCCCCCCCchH
Confidence 99999999999999999998764432 2223457889999998865432 578999999999999999999998653321
Q ss_pred cccccHHHHHH-------HHHhcCC-CCccccccccCC-----CCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 745 EKEGNLVSWVR-------GLVRNNK-GSRAIDPKIRDT-----GPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 745 ~~~~~~~~~~~-------~~~~~~~-~~~~~~~~~~~~-----~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
+....+..+.. ....... ......+..... .....+..+.+++.+||..+|++||++.++++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 208 DQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred HHHHHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 11111111110 0000000 000001111000 01234677999999999999999999999875
No 254
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=2e-35 Score=312.42 Aligned_cols=261 Identities=26% Similarity=0.390 Sum_probs=202.6
Q ss_pred cCHHHHHHHhcCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCcccHHHHHHHHHHhcCC-CCCCceeeeeEEEe
Q 003504 498 ITFADLLSATSNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGSTLTDQEAARELEYLGRI-KHPNLVPLTGYCIA 575 (815)
Q Consensus 498 ~~~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~ 575 (815)
.++.++..+...|+..+.||+|+||.||+|.. .+++.||+|.+... ......+..|+.++.++ +||||+++++++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~-~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 84 (282)
T cd06636 6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVT-EDEEEEIKLEINMLKKYSHHRNIATYYGAFIK 84 (282)
T ss_pred hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecC-hHHHHHHHHHHHHHHHhcCCCcEEEEeeehhc
Confidence 45566666778999999999999999999995 56889999988653 23345688899999998 69999999999863
Q ss_pred ------CCeeEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHH
Q 003504 576 ------GDQRIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAF 649 (815)
Q Consensus 576 ------~~~~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~y 649 (815)
....+++|||+++|+|.+++.... ...+++..+..++.|++.||+|
T Consensus 85 ~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~----------------------------~~~~~~~~~~~~~~qi~~al~~ 136 (282)
T cd06636 85 KSPPGHDDQLWLVMEFCGAGSVTDLVKNTK----------------------------GNALKEDWIAYICREILRGLAH 136 (282)
T ss_pred ccccCCCCEEEEEEEeCCCCcHHHHHHHcc----------------------------CCCCCHHHHHHHHHHHHHHHHH
Confidence 357799999999999999986521 2246677788999999999999
Q ss_pred HhcCCCCCeeeccCCCCceEEcCCCCeeecccccceecCCCC-ccccccccccccCCcccCCC---CCCCCCcCcchhHH
Q 003504 650 LHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGL-DEEIARGSPGYIPPEFAQPD---SDFPTPKSDVYCYG 725 (815)
Q Consensus 650 LH~~~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~-~~~~~~gt~~y~aPE~~~~~---~~~~~~~~Dv~S~G 725 (815)
|| +.+|+||||||+||++++++.++|+|||++....... ......|+..|+|||.+... ...++.++||||||
T Consensus 137 LH---~~~ivH~dl~~~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG 213 (282)
T cd06636 137 LH---AHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLG 213 (282)
T ss_pred HH---HCCcccCCCCHHHEEECCCCCEEEeeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHH
Confidence 99 8899999999999999999999999999987654221 22345589999999987632 12267899999999
Q ss_pred HHHHHHHhCCCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHH
Q 003504 726 VVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIV 805 (815)
Q Consensus 726 vvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~ 805 (815)
|++|||++|+.||....+.+.. ....+ ...+.. ....++.++.+++.+||..||.+||++.|++
T Consensus 214 ~~l~el~~g~~p~~~~~~~~~~-------~~~~~------~~~~~~---~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell 277 (282)
T cd06636 214 ITAIEMAEGAPPLCDMHPMRAL-------FLIPR------NPPPKL---KSKKWSKKFIDFIEGCLVKNYLSRPSTEQLL 277 (282)
T ss_pred HHHHHHHhCCCCccccCHHhhh-------hhHhh------CCCCCC---cccccCHHHHHHHHHHhCCChhhCcCHHHHh
Confidence 9999999999999753221110 00000 001111 1234566899999999999999999999987
Q ss_pred H
Q 003504 806 G 806 (815)
Q Consensus 806 ~ 806 (815)
+
T Consensus 278 ~ 278 (282)
T cd06636 278 K 278 (282)
T ss_pred c
Confidence 5
No 255
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=4.9e-35 Score=308.59 Aligned_cols=246 Identities=23% Similarity=0.334 Sum_probs=200.5
Q ss_pred CCCCCCeecccCCeeeEEEEcC-CCcEEEEEEeecCC-cccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeC
Q 003504 509 NFDRGTLLAEGKFGPVYRGFLP-GGIHVAVKVLVHGS-TLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYM 586 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 586 (815)
.|+..+.||.|+||.||+|... ++..||+|.+.... ....+.+.+|++++++++||||+++++++.+....++||||+
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence 4667789999999999999964 58899999986532 234567889999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCC
Q 003504 587 ENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKAS 666 (815)
Q Consensus 587 ~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~ 666 (815)
++|+|.+++... .+++.....++.|++.||+||| +.+++|+||+|+
T Consensus 85 ~~~~L~~~i~~~-------------------------------~l~~~~~~~~~~~l~~~l~~lh---~~~ivH~dl~p~ 130 (277)
T cd06640 85 GGGSALDLLRAG-------------------------------PFDEFQIATMLKEILKGLDYLH---SEKKIHRDIKAA 130 (277)
T ss_pred CCCcHHHHHhcC-------------------------------CCCHHHHHHHHHHHHHHHHHHH---hCCccCcCCChh
Confidence 999999998641 3567778899999999999999 889999999999
Q ss_pred ceEEcCCCCeeecccccceecCCCC-ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCcc
Q 003504 667 SVYLDMNLEPRLSDFGLAKIFGNGL-DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEE 745 (815)
Q Consensus 667 NIll~~~~~~kl~Dfgla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~ 745 (815)
||+++.++.++|+|||++....... ......++..|+|||++.+.. ++.++|||||||++|||++|+.||....+..
T Consensus 131 Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~--~~~~~Dv~slG~il~el~tg~~p~~~~~~~~ 208 (277)
T cd06640 131 NVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSA--YDSKADIWSLGITAIELAKGEPPNSDMHPMR 208 (277)
T ss_pred hEEEcCCCCEEEcccccceeccCCccccccccCcccccCHhHhccCC--CccHHHHHHHHHHHHHHHHCCCCCCCcChHh
Confidence 9999999999999999998765433 223345788999999987655 6889999999999999999999987533221
Q ss_pred ccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003504 746 KEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGL 807 (815)
Q Consensus 746 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~ 807 (815)
. .. .. ........+...+..+.+++.+||+.+|++||+++++++.
T Consensus 209 ~-------~~-~~---------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 209 V-------LF-LI---------PKNNPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred H-------hh-hh---------hcCCCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 1 00 00 0111122345677889999999999999999999999764
No 256
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=4.1e-35 Score=307.53 Aligned_cols=253 Identities=19% Similarity=0.302 Sum_probs=188.9
Q ss_pred eecccCCeeeEEEEcCCC---cEEEEEEeecCC-cccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeCCCCC
Q 003504 515 LLAEGKFGPVYRGFLPGG---IHVAVKVLVHGS-TLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGN 590 (815)
Q Consensus 515 ~ig~G~~g~Vy~~~~~~~---~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gs 590 (815)
.||+|+||.||+|...++ ..+++|.+.... ....+.+.+|+.+++.++||||++++++|......++||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 699999999999975433 346677665432 2345688999999999999999999999999999999999999999
Q ss_pred hhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCceEE
Q 003504 591 LQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYL 670 (815)
Q Consensus 591 L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NIll 670 (815)
|.++++.... .....++.....++.|+++||+||| +.+++||||||+|||+
T Consensus 82 L~~~l~~~~~--------------------------~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dikp~nil~ 132 (268)
T cd05086 82 LKSYLSQEQW--------------------------HRRNSQLLLLQRMACEIAAGVTHMH---KHNFLHSDLALRNCFL 132 (268)
T ss_pred HHHHHHhhhc--------------------------ccccccHHHHHHHHHHHHHHHHHHH---HCCeeccCCccceEEE
Confidence 9999975310 1223556677889999999999999 7899999999999999
Q ss_pred cCCCCeeecccccceecCCCC---ccccccccccccCCcccCCCC-----CCCCCcCcchhHHHHHHHHHh-CCCCCCCC
Q 003504 671 DMNLEPRLSDFGLAKIFGNGL---DEEIARGSPGYIPPEFAQPDS-----DFPTPKSDVYCYGVVLLELIT-GKKPLGDD 741 (815)
Q Consensus 671 ~~~~~~kl~Dfgla~~~~~~~---~~~~~~gt~~y~aPE~~~~~~-----~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~ 741 (815)
+.++.+||+|||++....... ......|+..|+|||++.... ..++.++|||||||++|||++ |..||...
T Consensus 133 ~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~ 212 (268)
T cd05086 133 TSDLTVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHL 212 (268)
T ss_pred cCCccEEecccccccccCcchhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Confidence 999999999999986432211 122345788999999875321 124779999999999999997 56677542
Q ss_pred CCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 003504 742 YPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLK 809 (815)
Q Consensus 742 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~ 809 (815)
.. .+........ ......++.+... ....+.+++..|| .+|++||++++|++.|.
T Consensus 213 ~~-------~~~~~~~~~~-~~~~~~~~~~~~~----~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 213 SD-------REVLNHVIKD-QQVKLFKPQLELP----YSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred CH-------HHHHHHHHhh-cccccCCCccCCC----CcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 21 1122222222 1222333333322 3456778999999 67999999999998874
No 257
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=3.3e-35 Score=306.44 Aligned_cols=248 Identities=26% Similarity=0.369 Sum_probs=200.0
Q ss_pred CCCCCCeecccCCeeeEEEEcC-CCcEEEEEEeecCCc-----ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEE
Q 003504 509 NFDRGTLLAEGKFGPVYRGFLP-GGIHVAVKVLVHGST-----LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAI 582 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-----~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv 582 (815)
+|+..+.||+|+||.||+|+.. ++..||+|.+..... ...+.+.+|++++++++||||+++++++.+....++|
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 4677899999999999999965 789999999865331 2345788999999999999999999999999999999
Q ss_pred EEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecc
Q 003504 583 YDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRD 662 (815)
Q Consensus 583 ~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrD 662 (815)
+||+++++|.++++.. ..+++..+..++.|++.||+||| +.+++|||
T Consensus 81 ~e~~~~~~L~~~~~~~------------------------------~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~d 127 (258)
T cd06632 81 LELVPGGSLAKLLKKY------------------------------GSFPEPVIRLYTRQILLGLEYLH---DRNTVHRD 127 (258)
T ss_pred EEecCCCcHHHHHHhc------------------------------CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCC
Confidence 9999999999999642 24678888999999999999999 88999999
Q ss_pred CCCCceEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCC
Q 003504 663 IKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDY 742 (815)
Q Consensus 663 lk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~ 742 (815)
|+|+||+++.++.+||+|||++.............|+..|+|||.+.... .++.++|+|||||++||+++|+.||....
T Consensus 128 l~~~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~-~~~~~~D~~slG~~l~~l~~g~~pf~~~~ 206 (258)
T cd06632 128 IKGANILVDTNGVVKLADFGMAKQVVEFSFAKSFKGSPYWMAPEVIAQQG-GYGLAADIWSLGCTVLEMATGKPPWSQLE 206 (258)
T ss_pred CCHHHEEECCCCCEEEccCccceeccccccccccCCCcceeCHHHhcCCC-CCCchhhhHHHHHHHHHHHhCCCCcccCc
Confidence 99999999999999999999998765443334456889999999876543 26889999999999999999999997532
Q ss_pred CccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 743 PEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 743 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
. ............ ....+......+.+++.+||..+|++||++.++++
T Consensus 207 ~-------~~~~~~~~~~~~---------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 207 G-------VAAVFKIGRSKE---------LPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred H-------HHHHHHHHhccc---------CCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 1 111111111000 01113345567889999999999999999999975
No 258
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=2.6e-35 Score=306.89 Aligned_cols=248 Identities=23% Similarity=0.361 Sum_probs=201.3
Q ss_pred CCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecC--CcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEe
Q 003504 509 NFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHG--STLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDY 585 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 585 (815)
+|+..+.||+|+||.||++.. .+|+.||+|.+... ......++.+|+.++++++||||+++++++...+..++|+||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 477889999999999999984 56889999998643 223345789999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCC
Q 003504 586 MENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKA 665 (815)
Q Consensus 586 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~ 665 (815)
+++++|.+++... ....+++....+++.|++.||+||| +.+++|+||+|
T Consensus 81 ~~~~~l~~~~~~~----------------------------~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~~l~~ 129 (256)
T cd08218 81 CEGGDLYKKINAQ----------------------------RGVLFPEDQILDWFVQICLALKHVH---DRKILHRDIKS 129 (256)
T ss_pred CCCCcHHHHHHhc----------------------------cCCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCH
Confidence 9999999998652 1234678888999999999999999 78999999999
Q ss_pred CceEEcCCCCeeecccccceecCCCCc-cccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCc
Q 003504 666 SSVYLDMNLEPRLSDFGLAKIFGNGLD-EEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPE 744 (815)
Q Consensus 666 ~NIll~~~~~~kl~Dfgla~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~ 744 (815)
+||+++.++.++|+|||++........ .....|+..|+|||+..+.. .+.++|||||||++||+++|+.||....
T Consensus 130 ~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~--~~~~~Dv~slG~i~~~l~~g~~~~~~~~-- 205 (256)
T cd08218 130 QNIFLTKDGTIKLGDFGIARVLNSTVELARTCIGTPYYLSPEICENRP--YNNKSDIWALGCVLYEMCTLKHAFEAGN-- 205 (256)
T ss_pred HHEEEcCCCCEEEeeccceeecCcchhhhhhccCCccccCHHHhCCCC--CCCccchhHHHHHHHHHHcCCCCccCCC--
Confidence 999999999999999999987654321 22345788999999987665 6889999999999999999999986422
Q ss_pred cccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 745 EKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
....+........ ...+...+.++.+++.+||+.+|++||++.+|++
T Consensus 206 -----~~~~~~~~~~~~~----------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 206 -----MKNLVLKIIRGSY----------PPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred -----HHHHHHHHhcCCC----------CCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 1222222221110 1113345667899999999999999999999986
No 259
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=4.2e-35 Score=305.52 Aligned_cols=248 Identities=24% Similarity=0.328 Sum_probs=198.9
Q ss_pred CCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCc--ccHHHHHHHHHHhcCCCCCCceeeeeEEEeC-CeeEEEEE
Q 003504 509 NFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGST--LTDQEAARELEYLGRIKHPNLVPLTGYCIAG-DQRIAIYD 584 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~-~~~~lv~e 584 (815)
+|++.+.||+|++|.||++.. .+++.||+|.+..... ...+.+.+|++++++++|||++++++.+... ...++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 477889999999999999995 4578899999865322 3345688999999999999999999987643 35789999
Q ss_pred eCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCC
Q 003504 585 YMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIK 664 (815)
Q Consensus 585 y~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk 664 (815)
|+++++|.+++... ....+++..+..++.+++.|++||| +.+++|||||
T Consensus 81 ~~~~~~l~~~l~~~----------------------------~~~~l~~~~~~~~~~~l~~~l~~lH---~~~i~H~di~ 129 (257)
T cd08223 81 FCEGGDLYHKLKEQ----------------------------KGKLLPENQVVEWFVQIAMALQYLH---EKHILHRDLK 129 (257)
T ss_pred ccCCCcHHHHHHHh----------------------------cCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCC
Confidence 99999999999752 1335788999999999999999999 8899999999
Q ss_pred CCceEEcCCCCeeecccccceecCCCC-ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCC
Q 003504 665 ASSVYLDMNLEPRLSDFGLAKIFGNGL-DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYP 743 (815)
Q Consensus 665 ~~NIll~~~~~~kl~Dfgla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~ 743 (815)
|+||+++.++.++|+|||++....... ......|++.|+|||+..+.. ++.++||||||+++||+++|+.||....
T Consensus 130 p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~Dv~slG~il~~l~~g~~~~~~~~- 206 (257)
T cd08223 130 TQNVFLTRTNIIKVGDLGIARVLENQCDMASTLIGTPYYMSPELFSNKP--YNYKSDVWALGCCVYEMATLKHAFNAKD- 206 (257)
T ss_pred chhEEEecCCcEEEecccceEEecccCCccccccCCcCccChhHhcCCC--CCchhhhHHHHHHHHHHHcCCCCCCCCC-
Confidence 999999999999999999998764322 223345889999999987665 6889999999999999999999986422
Q ss_pred ccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 744 EEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 744 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
............ ....+...+.++.+++.+||+.+|++||++.++++
T Consensus 207 ------~~~~~~~~~~~~----------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 207 ------MNSLVYRIIEGK----------LPPMPKDYSPELGELIATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred ------HHHHHHHHHhcC----------CCCCccccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 122222222111 01123446678999999999999999999999975
No 260
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=3.9e-35 Score=308.67 Aligned_cols=256 Identities=26% Similarity=0.408 Sum_probs=197.1
Q ss_pred CCCCCeecccCCeeeEEEEcC----CCcEEEEEEeecCC--cccHHHHHHHHHHhcCCCCCCceeeeeEEEeCC------
Q 003504 510 FDRGTLLAEGKFGPVYRGFLP----GGIHVAVKVLVHGS--TLTDQEAARELEYLGRIKHPNLVPLTGYCIAGD------ 577 (815)
Q Consensus 510 ~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~------ 577 (815)
|.+.+.||+|+||.||+|... ++..||||++.... ....+.+.+|++++++++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 566789999999999999853 36889999986532 223456889999999999999999999887542
Q ss_pred eeEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCC
Q 003504 578 QRIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPP 657 (815)
Q Consensus 578 ~~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ 657 (815)
..++++||+++|+|..++...... .....+++....+++.|++.||+||| +.+
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~------------------------~~~~~l~~~~~~~~~~~i~~~l~~lH---~~~ 133 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIG------------------------EEPFTLPLQTLVRFMIDIASGMEYLS---SKN 133 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhccc------------------------CCCCCCCHHHHHHHHHHHHHHHHHHH---hCC
Confidence 247889999999999888542110 11234778889999999999999999 789
Q ss_pred eeeccCCCCceEEcCCCCeeecccccceecCCCCc---cccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-
Q 003504 658 IIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLD---EEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT- 733 (815)
Q Consensus 658 ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t- 733 (815)
|+||||||+||+++.++.+||+|||+++....+.. .....++..|++||.+.... ++.++||||||+++||+++
T Consensus 134 i~H~dikp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~--~~~~sDi~slG~il~el~~~ 211 (273)
T cd05074 134 FIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNV--YTTHSDVWAFGVTMWEIMTR 211 (273)
T ss_pred EeecccchhhEEEcCCCCEEECcccccccccCCcceecCCCccCchhhcCHhHHhcCc--cchhhhhHHHHHHHHHHhhC
Confidence 99999999999999999999999999987643321 12233567899999887665 6889999999999999999
Q ss_pred CCCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhh
Q 003504 734 GKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDI 811 (815)
Q Consensus 734 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 811 (815)
|+.||...... .+..+.. .... ...+...+..+.+++.+||+.+|++||++.++++.|+++
T Consensus 212 g~~p~~~~~~~----~~~~~~~---~~~~----------~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 212 GQTPYAGVENS----EIYNYLI---KGNR----------LKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred CCCCCCCCCHH----HHHHHHH---cCCc----------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 88888643221 1221111 1110 001223456899999999999999999999999999876
No 261
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=9.4e-36 Score=310.91 Aligned_cols=251 Identities=29% Similarity=0.454 Sum_probs=196.8
Q ss_pred CCCCCeecccCCeeeEEEEcC-CCcEEEEEEeecCCcccHH--HHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeC
Q 003504 510 FDRGTLLAEGKFGPVYRGFLP-GGIHVAVKVLVHGSTLTDQ--EAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYM 586 (815)
Q Consensus 510 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~--~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 586 (815)
|+..+.||+|+||.||+|... ++..||+|.+......... ...+|+.++++++||||+++++++......++||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 455789999999999999954 5678999999875443332 3456999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCC
Q 003504 587 ENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKAS 666 (815)
Q Consensus 587 ~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~ 666 (815)
++++|.+++.. ...+++..+..++.|+++||+||| +.+++||||||+
T Consensus 81 ~~~~L~~~l~~------------------------------~~~~~~~~~~~~~~qi~~~L~~Lh---~~~i~H~dikp~ 127 (260)
T PF00069_consen 81 PGGSLQDYLQK------------------------------NKPLSEEEILKIAYQILEALAYLH---SKGIVHRDIKPE 127 (260)
T ss_dssp TTEBHHHHHHH------------------------------HSSBBHHHHHHHHHHHHHHHHHHH---HTTEEESSBSGG
T ss_pred ccccccccccc------------------------------cccccccccccccccccccccccc---cccccccccccc
Confidence 99999999962 235788999999999999999999 789999999999
Q ss_pred ceEEcCCCCeeecccccceec-CCCCccccccccccccCCcccC-CCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCc
Q 003504 667 SVYLDMNLEPRLSDFGLAKIF-GNGLDEEIARGSPGYIPPEFAQ-PDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPE 744 (815)
Q Consensus 667 NIll~~~~~~kl~Dfgla~~~-~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~ 744 (815)
||++++++.++|+|||.+... ..........++..|+|||++. ... .+.++||||+|+++|+|++|..||......
T Consensus 128 NIl~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~--~~~~~Di~slG~il~~l~~~~~p~~~~~~~ 205 (260)
T PF00069_consen 128 NILLDENGEVKLIDFGSSVKLSENNENFNPFVGTPEYMAPEVLQQGKK--YTRKSDIWSLGIILYELLTGKLPFEESNSD 205 (260)
T ss_dssp GEEESTTSEEEESSGTTTEESTSTTSEBSSSSSSGGGSCHHHHTTTSS--BSTHHHHHHHHHHHHHHHHSSSSSTTSSHH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccccccch
Confidence 999999999999999999864 2223444566899999999987 444 689999999999999999999999853111
Q ss_pred cccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 745 EKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
. ............ ...... .......++.+++.+||+.||++||++.++++
T Consensus 206 ~----~~~~~~~~~~~~-----~~~~~~--~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 206 D----QLEIIEKILKRP-----LPSSSQ--QSREKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp H----HHHHHHHHHHTH-----HHHHTT--SHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred h----hhhhhhhccccc-----cccccc--ccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1 111111111000 000000 00111378999999999999999999999975
No 262
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=6.9e-35 Score=311.02 Aligned_cols=265 Identities=23% Similarity=0.281 Sum_probs=199.3
Q ss_pred CCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCcc-----cHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEE
Q 003504 509 NFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGSTL-----TDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAI 582 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~-----~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv 582 (815)
+|+..+.||+|+||.||+|.. .+++.||||.+...... ....+..|++++++++|+||+++++++.+.+..++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 477788999999999999995 46899999999764322 234567899999999999999999999999999999
Q ss_pred EEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecc
Q 003504 583 YDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRD 662 (815)
Q Consensus 583 ~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrD 662 (815)
|||+ +|+|.++++.. ...+++..+..++.|+++||+||| +.+++|||
T Consensus 81 ~e~~-~~~L~~~i~~~-----------------------------~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~d 127 (298)
T cd07841 81 FEFM-ETDLEKVIKDK-----------------------------SIVLTPADIKSYMLMTLRGLEYLH---SNWILHRD 127 (298)
T ss_pred Eccc-CCCHHHHHhcc-----------------------------CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecC
Confidence 9999 89999999642 125789999999999999999999 88999999
Q ss_pred CCCCceEEcCCCCeeecccccceecCCCC-ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCC
Q 003504 663 IKASSVYLDMNLEPRLSDFGLAKIFGNGL-DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDD 741 (815)
Q Consensus 663 lk~~NIll~~~~~~kl~Dfgla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~ 741 (815)
|||+||+++.++.+||+|||+++...... ......++..|+|||.+.+... ++.++|||||||++||+++|..||...
T Consensus 128 l~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~~Dv~slG~il~e~~~g~~~~~~~ 206 (298)
T cd07841 128 LKPNNLLIASDGVLKLADFGLARSFGSPNRKMTHQVVTRWYRAPELLFGARH-YGVGVDMWSVGCIFAELLLRVPFLPGD 206 (298)
T ss_pred CChhhEEEcCCCCEEEccceeeeeccCCCccccccccceeeeCHHHHhCCCC-CCcHHHHHHHHHHHHHHHcCCccccCC
Confidence 99999999999999999999998765432 2233356788999998755332 688999999999999999998777653
Q ss_pred CCccccccHHHHHHH-----HHhcCCCCccccccccCC-----CCHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003504 742 YPEEKEGNLVSWVRG-----LVRNNKGSRAIDPKIRDT-----GPEKQMEEALKIGYLCTADLPLKRPSMQQIVGL 807 (815)
Q Consensus 742 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~ 807 (815)
...+....+...+.. .................. .......++.+++.+||+.+|++||+++++++.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 207 SDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred ccHHHHHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 322111111110000 000000000000000000 112345788999999999999999999999863
No 263
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-35 Score=305.02 Aligned_cols=248 Identities=25% Similarity=0.326 Sum_probs=211.0
Q ss_pred cCCCCCCeecccCCeeeEEEE-cCCCcEEEEEEeecCCc--ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEE
Q 003504 508 SNFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHGST--LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYD 584 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 584 (815)
.-|+..+.||+|.|+.|-.|+ .-+|.+||||++.+... .....+.+|+..|.-++|||||++|.+...+...|+|.|
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLE 97 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILE 97 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEE
Confidence 347778999999999999998 46799999999976432 334567899999999999999999999999999999999
Q ss_pred eCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCC
Q 003504 585 YMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIK 664 (815)
Q Consensus 585 y~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk 664 (815)
.=++|+|++|+.+. ...+......+.+.||..|+.|+| ...+||||||
T Consensus 98 LGD~GDl~DyImKH-----------------------------e~Gl~E~La~kYF~QI~~AI~YCH---qLHVVHRDLK 145 (864)
T KOG4717|consen 98 LGDGGDLFDYIMKH-----------------------------EEGLNEDLAKKYFAQIVHAISYCH---QLHVVHRDLK 145 (864)
T ss_pred ecCCchHHHHHHhh-----------------------------hccccHHHHHHHHHHHHHHHHHHh---hhhhhcccCC
Confidence 99999999999864 234556667889999999999999 7889999999
Q ss_pred CCceEEc-CCCCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCC
Q 003504 665 ASSVYLD-MNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYP 743 (815)
Q Consensus 665 ~~NIll~-~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~ 743 (815)
|+||.+- .-|-+|+.|||++-.+.++....+.+|+..|-|||++.+..+ .-++.||||+||++|-|+.|+.||.....
T Consensus 146 PENVVFFEKlGlVKLTDFGFSNkf~PG~kL~TsCGSLAYSAPEILLGDsY-DAPAVDiWSLGVILyMLVCGq~PFqeAND 224 (864)
T KOG4717|consen 146 PENVVFFEKLGLVKLTDFGFSNKFQPGKKLTTSCGSLAYSAPEILLGDSY-DAPAVDIWSLGVILYMLVCGQPPFQEAND 224 (864)
T ss_pred cceeEEeeecCceEeeeccccccCCCcchhhcccchhhccCchhhhcCcc-CCcchhhhHHHHHHHHHHhCCCccccccc
Confidence 9998775 557899999999999999999999999999999999998874 57899999999999999999999987554
Q ss_pred ccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 744 EEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 744 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
.+.. ..++|-.+ ..|.....+..+++..|+..||.+|-+.++|+.
T Consensus 225 SETL----------------TmImDCKY--tvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 225 SETL----------------TMIMDCKY--TVPSHVSKECRDLIQSMLVRDPKKRASLEEIVS 269 (864)
T ss_pred hhhh----------------hhhhcccc--cCchhhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence 4332 12223222 237788899999999999999999999998853
No 264
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=1e-35 Score=316.03 Aligned_cols=247 Identities=23% Similarity=0.376 Sum_probs=197.3
Q ss_pred CCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeCCC
Q 003504 510 FDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMEN 588 (815)
Q Consensus 510 ~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 588 (815)
|.....||+|+||.||++.. .++..||||.+........+.+.+|+.++++++||||+++++++..++..++||||+++
T Consensus 24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~ 103 (292)
T cd06658 24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEG 103 (292)
T ss_pred HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCC
Confidence 44457899999999999985 46889999998665545566788999999999999999999999999999999999999
Q ss_pred CChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCce
Q 003504 589 GNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSV 668 (815)
Q Consensus 589 gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NI 668 (815)
++|.+++.. ..+++.....++.|++.||+||| +.+|+||||||+||
T Consensus 104 ~~L~~~~~~-------------------------------~~l~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Ni 149 (292)
T cd06658 104 GALTDIVTH-------------------------------TRMNEEQIATVCLSVLRALSYLH---NQGVIHRDIKSDSI 149 (292)
T ss_pred CcHHHHHhc-------------------------------CCCCHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHE
Confidence 999998853 13677888999999999999999 78999999999999
Q ss_pred EEcCCCCeeecccccceecCCCC-ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCcccc
Q 003504 669 YLDMNLEPRLSDFGLAKIFGNGL-DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKE 747 (815)
Q Consensus 669 ll~~~~~~kl~Dfgla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~ 747 (815)
+++.++.+||+|||++....... ......|+..|+|||...... ++.++|||||||++||+++|+.||.......
T Consensus 150 ll~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~Dv~slGvil~el~~g~~p~~~~~~~~-- 225 (292)
T cd06658 150 LLTSDGRIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVISRLP--YGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQ-- 225 (292)
T ss_pred EEcCCCCEEEccCcchhhcccccccCceeecCccccCHHHHccCC--CCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--
Confidence 99999999999999987654322 223345889999999987655 6889999999999999999999997532211
Q ss_pred ccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003504 748 GNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGL 807 (815)
Q Consensus 748 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~ 807 (815)
.+.. ... ...+.... ....+..+.+++.+||..||++||+++++++.
T Consensus 226 -----~~~~-~~~-----~~~~~~~~--~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 226 -----AMRR-IRD-----NLPPRVKD--SHKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred -----HHHH-HHh-----cCCCcccc--ccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 1111 111 01111111 12244578899999999999999999999864
No 265
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=5.9e-35 Score=304.41 Aligned_cols=249 Identities=31% Similarity=0.462 Sum_probs=199.2
Q ss_pred CCCCCeecccCCeeeEEEEcCC-----CcEEEEEEeecCCcc-cHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEE
Q 003504 510 FDRGTLLAEGKFGPVYRGFLPG-----GIHVAVKVLVHGSTL-TDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIY 583 (815)
Q Consensus 510 ~~~~~~ig~G~~g~Vy~~~~~~-----~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 583 (815)
|++.+.||+|+||.||+|+..+ +..||+|.+...... ..+.+..|++++.+++||||+++++++.+.+..+++|
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~ 80 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM 80 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence 3567899999999999999653 478999999764433 4568899999999999999999999999999999999
Q ss_pred EeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccC
Q 003504 584 DYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDI 663 (815)
Q Consensus 584 ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDl 663 (815)
||+++++|.+++.... ...+++..+..++.|++.||+||| +.+++||||
T Consensus 81 e~~~~~~l~~~~~~~~----------------------------~~~~~~~~~~~~~~ql~~~l~~lh---~~~~~h~dl 129 (258)
T smart00219 81 EYMEGGDLLDYLRKNR----------------------------PKELSLSDLLSFALQIARGMEYLE---SKNFIHRDL 129 (258)
T ss_pred eccCCCCHHHHHHhhh----------------------------hccCCHHHHHHHHHHHHHHHHHHh---cCCeeeccc
Confidence 9999999999997521 112789999999999999999999 889999999
Q ss_pred CCCceEEcCCCCeeecccccceecCCCCccc--cccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCC
Q 003504 664 KASSVYLDMNLEPRLSDFGLAKIFGNGLDEE--IARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GKKPLGD 740 (815)
Q Consensus 664 k~~NIll~~~~~~kl~Dfgla~~~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~ 740 (815)
||+||+++.++.++|+|||+++......... ...++..|+|||.+.... ++.++||||+|+++|||++ |+.||..
T Consensus 130 ~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~--~~~~~Di~slG~i~~~l~~~g~~p~~~ 207 (258)
T smart00219 130 AARNCLVGENLVVKISDFGLSRDLYDDDYYKKKGGKLPIRWMAPESLKDGK--FTSKSDVWSFGVLLWEIFTLGESPYPG 207 (258)
T ss_pred ccceEEEccCCeEEEcccCCceecccccccccccCCCcccccChHHhccCC--CCcchhHHHHHHHHHHHHhCCCCCCCC
Confidence 9999999999999999999998765442211 233678999999885544 7899999999999999998 7888764
Q ss_pred CCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 003504 741 DYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLL 808 (815)
Q Consensus 741 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L 808 (815)
... ........... ....+...+.++.+++.+|+..+|++||++.|+++.|
T Consensus 208 ~~~-------~~~~~~~~~~~----------~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 208 MSN-------EEVLEYLKKGY----------RLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred CCH-------HHHHHHHhcCC----------CCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 211 11111111111 0111233567899999999999999999999998864
No 266
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=2e-35 Score=313.49 Aligned_cols=264 Identities=21% Similarity=0.252 Sum_probs=198.9
Q ss_pred CCCCCCeecccCCeeeEEEEcC-CCcEEEEEEeecCC--cccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEe
Q 003504 509 NFDRGTLLAEGKFGPVYRGFLP-GGIHVAVKVLVHGS--TLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDY 585 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 585 (815)
+|+..+.||+|+||.||+|... ++..||||.+.... ....+.+.+|++++++++|+||+++++++...+..++||||
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 81 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEY 81 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEec
Confidence 6788899999999999999964 58899999886532 22346789999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCC
Q 003504 586 MENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKA 665 (815)
Q Consensus 586 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~ 665 (815)
++++.+..+... ...+++.....++.|++.||+||| ..+++||||+|
T Consensus 82 ~~~~~l~~~~~~------------------------------~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~~ 128 (288)
T cd07833 82 VERTLLELLEAS------------------------------PGGLPPDAVRSYIWQLLQAIAYCH---SHNIIHRDIKP 128 (288)
T ss_pred CCCCHHHHHHhc------------------------------CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCH
Confidence 998777665543 224678889999999999999999 78999999999
Q ss_pred CceEEcCCCCeeecccccceecCCCC--ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCC
Q 003504 666 SSVYLDMNLEPRLSDFGLAKIFGNGL--DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYP 743 (815)
Q Consensus 666 ~NIll~~~~~~kl~Dfgla~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~ 743 (815)
+||++++++.+||+|||++....... ......++..|+|||++.+.. .++.++||||||+++||+++|+.||.....
T Consensus 129 ~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~-~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~ 207 (288)
T cd07833 129 ENILVSESGVLKLCDFGFARALRARPASPLTDYVATRWYRAPELLVGDT-NYGKPVDVWAIGCIMAELLDGEPLFPGDSD 207 (288)
T ss_pred HHeEECCCCCEEEEeeecccccCCCccccccCcccccCCcCCchhcCCC-CcCchhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 99999999999999999998765433 223345788999999987662 268899999999999999999999975322
Q ss_pred ccccccHHHHHHH-------HHhc-CCCC--c---ccccc-ccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 744 EEKEGNLVSWVRG-------LVRN-NKGS--R---AIDPK-IRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 744 ~~~~~~~~~~~~~-------~~~~-~~~~--~---~~~~~-~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
.+....+...... .... .... + ..++. .....+...+.++.+++.+||..+|++||+++++++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 208 IDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred HHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 1110000000000 0000 0000 0 00000 000112234678999999999999999999999875
No 267
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=7.6e-35 Score=309.55 Aligned_cols=249 Identities=23% Similarity=0.358 Sum_probs=201.4
Q ss_pred cCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeC
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYM 586 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 586 (815)
++|...+.||+|+||.||+|.. .++..||+|.+........+.+.+|+.++++++||||+++++++...+..++|+||+
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~ 98 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL 98 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence 5788889999999999999984 568899999986544455667899999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCC
Q 003504 587 ENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKAS 666 (815)
Q Consensus 587 ~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~ 666 (815)
++|+|.+++... .+++..+..++.|++.||+||| +.+++||||||+
T Consensus 99 ~~~~L~~~~~~~-------------------------------~l~~~~~~~i~~~l~~al~~LH---~~gi~H~dL~p~ 144 (293)
T cd06647 99 AGGSLTDVVTET-------------------------------CMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSD 144 (293)
T ss_pred CCCcHHHHHhhc-------------------------------CCCHHHHHHHHHHHHHHHHHHH---hCCEeeccCCHH
Confidence 999999998641 3567888999999999999999 899999999999
Q ss_pred ceEEcCCCCeeecccccceecCCCC-ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCcc
Q 003504 667 SVYLDMNLEPRLSDFGLAKIFGNGL-DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEE 745 (815)
Q Consensus 667 NIll~~~~~~kl~Dfgla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~ 745 (815)
||+++.++.+||+|||++....... ......|++.|+|||.+.... ++.++|||||||++||+++|+.||....+.+
T Consensus 145 Nili~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~--~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~ 222 (293)
T cd06647 145 NILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKA--YGPKVDIWSLGIMAIEMVEGEPPYLNENPLR 222 (293)
T ss_pred HEEEcCCCCEEEccCcceecccccccccccccCChhhcCchhhccCC--CCchhhHHHHHHHHHHHHhCCCCCCCCChhh
Confidence 9999999999999999987654332 222345888999999887654 6889999999999999999999997532211
Q ss_pred ccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003504 746 KEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGL 807 (815)
Q Consensus 746 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~ 807 (815)
.. . .... .+......+...+..+.+++.+||..+|++||++.+++..
T Consensus 223 ~~---~----~~~~--------~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 223 AL---Y----LIAT--------NGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred he---e----ehhc--------CCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 10 0 0000 0000111133455678899999999999999999999864
No 268
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.4e-35 Score=298.78 Aligned_cols=248 Identities=23% Similarity=0.281 Sum_probs=198.3
Q ss_pred CCCCCCeecccCCeeeEEEEcCC-CcEEEEEEeecCCcccH---HHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEE
Q 003504 509 NFDRGTLLAEGKFGPVYRGFLPG-GIHVAVKVLVHGSTLTD---QEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYD 584 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~l~~~~~~~~---~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 584 (815)
.|...+.||+|.-|+||++...+ +..+|+|++.+...... .....|-+||+.++||.++.+|+.++.....++|||
T Consensus 78 ~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~me 157 (459)
T KOG0610|consen 78 HFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVME 157 (459)
T ss_pred HHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEe
Confidence 34556899999999999999765 58899999977544333 345668999999999999999999999999999999
Q ss_pred eCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCC
Q 003504 585 YMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIK 664 (815)
Q Consensus 585 y~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk 664 (815)
||+||+|..+.+.++ +..++.....-.|..|.-||+||| -.|||.||||
T Consensus 158 yCpGGdL~~LrqkQp----------------------------~~~fse~~aRFYaAEvl~ALEYLH---mlGivYRDLK 206 (459)
T KOG0610|consen 158 YCPGGDLHSLRQKQP----------------------------GKRFSESAARFYAAEVLLALEYLH---MLGIVYRDLK 206 (459)
T ss_pred cCCCccHHHHHhhCC----------------------------CCccchhhHHHHHHHHHHHHHHHH---hhceeeccCC
Confidence 999999999998742 445666666778899999999999 8999999999
Q ss_pred CCceEEcCCCCeeecccccceecCC---------------------------------C---------------------
Q 003504 665 ASSVYLDMNLEPRLSDFGLAKIFGN---------------------------------G--------------------- 690 (815)
Q Consensus 665 ~~NIll~~~~~~kl~Dfgla~~~~~---------------------------------~--------------------- 690 (815)
|+||||-++|++-|+||.++..... .
T Consensus 207 PENILvredGHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~ae 286 (459)
T KOG0610|consen 207 PENILVREDGHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAE 286 (459)
T ss_pred cceeEEecCCcEEeeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcC
Confidence 9999999999999999998753210 0
Q ss_pred ---CccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCccccccHHHHHHHHHhcCCCCccc
Q 003504 691 ---LDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAI 767 (815)
Q Consensus 691 ---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 767 (815)
......+||-.|+|||++.+.. -+.++|+|+|||++|||+.|+.||-+...++.-.+++
T Consensus 287 p~~~RSnSFVGThEYlAPEvI~G~G--HgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv---------------- 348 (459)
T KOG0610|consen 287 PTGARSNSFVGTHEYLAPEVIRGEG--HGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIV---------------- 348 (459)
T ss_pred CCCccccccccccccccceeeecCC--CCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHh----------------
Confidence 0111234899999999999887 5889999999999999999999999866554432222
Q ss_pred cccccCCCCHHHHHHHHHHHhhccccCCCCCCC----HHHHH
Q 003504 768 DPKIRDTGPEKQMEEALKIGYLCTADLPLKRPS----MQQIV 805 (815)
Q Consensus 768 ~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs----~~~v~ 805 (815)
-..+.-....+.+.++.+||++.+.+||++|.. ++||-
T Consensus 349 ~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK 390 (459)
T KOG0610|consen 349 GQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIK 390 (459)
T ss_pred cCCCcCCCCCcchhHHHHHHHHHhccChhhhhccccchHHhh
Confidence 111221122266788999999999999999997 55553
No 269
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=6.2e-35 Score=315.87 Aligned_cols=255 Identities=20% Similarity=0.236 Sum_probs=195.0
Q ss_pred cCCCCCCeecccCCeeeEEEEcC-CCcEEEEEEeecCC---cccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEE
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFLP-GGIHVAVKVLVHGS---TLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIY 583 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 583 (815)
++|.+.+.||+|+||.||++... +++.||+|++.+.. ......+.+|+.++..++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 36888899999999999999964 57889999986421 122345788999999999999999999999999999999
Q ss_pred EeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccC
Q 003504 584 DYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDI 663 (815)
Q Consensus 584 ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDl 663 (815)
||+++|+|.++++.. ...+++.....++.|++.||+||| +.+|+||||
T Consensus 81 ey~~~g~L~~~l~~~-----------------------------~~~l~~~~~~~~~~qi~~al~~lH---~~~iiHrDl 128 (332)
T cd05623 81 DYYVGGDLLTLLSKF-----------------------------EDRLPEDMARFYLAEMVIAIDSVH---QLHYVHRDI 128 (332)
T ss_pred eccCCCcHHHHHHHh-----------------------------cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCC
Confidence 999999999999752 234677888899999999999999 899999999
Q ss_pred CCCceEEcCCCCeeecccccceecCCCC--ccccccccccccCCcccCCC---CCCCCCcCcchhHHHHHHHHHhCCCCC
Q 003504 664 KASSVYLDMNLEPRLSDFGLAKIFGNGL--DEEIARGSPGYIPPEFAQPD---SDFPTPKSDVYCYGVVLLELITGKKPL 738 (815)
Q Consensus 664 k~~NIll~~~~~~kl~Dfgla~~~~~~~--~~~~~~gt~~y~aPE~~~~~---~~~~~~~~Dv~S~Gvvl~el~tg~~p~ 738 (815)
||+|||++.++.+||+|||+++...... ......||+.|+|||++... ...++.++|||||||++|||++|+.||
T Consensus 129 kp~Nili~~~~~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf 208 (332)
T cd05623 129 KPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPF 208 (332)
T ss_pred CHHHEEECCCCCEEEeecchheecccCCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCC
Confidence 9999999999999999999997654322 22335699999999988632 223688999999999999999999999
Q ss_pred CCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCC--CCCCHHHHHHH
Q 003504 739 GDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPL--KRPSMQQIVGL 807 (815)
Q Consensus 739 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~--~RPs~~~v~~~ 807 (815)
..... ............ +. .+ .......+.++.+++.+|+..+|+ .||+++++++.
T Consensus 209 ~~~~~-------~~~~~~i~~~~~--~~---~~-p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 209 YAESL-------VETYGKIMNHKE--RF---QF-PAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred CCCCH-------HHHHHHHhCCCc--cc---cC-CCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 75322 122222221110 00 00 011223456778888887755444 47889988754
No 270
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=1.2e-34 Score=311.90 Aligned_cols=200 Identities=21% Similarity=0.349 Sum_probs=160.3
Q ss_pred CCeecccCCeeeEEEEcC---CCcEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCceeeeeEEEe--CCeeEEEEEeCC
Q 003504 513 GTLLAEGKFGPVYRGFLP---GGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIA--GDQRIAIYDYME 587 (815)
Q Consensus 513 ~~~ig~G~~g~Vy~~~~~---~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~--~~~~~lv~ey~~ 587 (815)
++.||+|+||.||+|+.. +++.||+|.+... .....+.+|++++++++||||+++++++.. ....++||||+.
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGT--GISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 83 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCC--CCcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence 578999999999999854 4678999998643 223567899999999999999999998865 346789999987
Q ss_pred CCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCc
Q 003504 588 NGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASS 667 (815)
Q Consensus 588 ~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~N 667 (815)
+ +|.+++....... .......+++.....++.|++.||+||| +.+|+||||||+|
T Consensus 84 ~-~l~~~~~~~~~~~---------------------~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivHrDlkp~N 138 (317)
T cd07868 84 H-DLWHIIKFHRASK---------------------ANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPAN 138 (317)
T ss_pred C-CHHHHHHhccccc---------------------ccCCcccCCHHHHHHHHHHHHHHHHHHH---hCCEEcCCCCHHH
Confidence 5 8888875421100 0011235778888999999999999999 8899999999999
Q ss_pred eEE----cCCCCeeecccccceecCCCC----ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCC
Q 003504 668 VYL----DMNLEPRLSDFGLAKIFGNGL----DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLG 739 (815)
Q Consensus 668 Ill----~~~~~~kl~Dfgla~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~ 739 (815)
||+ +.++.+||+|||+++...... ......||+.|+|||++.+... ++.++||||+||++|||++|+.||.
T Consensus 139 il~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~-~~~~~DiwslG~il~el~~g~~~f~ 217 (317)
T cd07868 139 ILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARH-YTKAIDIWAIGCIFAELLTSEPIFH 217 (317)
T ss_pred EEEecCCCCcCcEEEeecCceeccCCCCccccccCCccccccccCCHHHcCCCC-cCchhhHHHHHHHHHHHHhCCCCcc
Confidence 999 456789999999998765322 2234568999999999876442 6889999999999999999999997
Q ss_pred C
Q 003504 740 D 740 (815)
Q Consensus 740 ~ 740 (815)
.
T Consensus 218 ~ 218 (317)
T cd07868 218 C 218 (317)
T ss_pred C
Confidence 5
No 271
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=6.6e-35 Score=307.18 Aligned_cols=256 Identities=28% Similarity=0.420 Sum_probs=201.4
Q ss_pred HhcCCCCCCeecccCCeeeEEEEcC-CCcEEEEEEeecCCcccHHHHHHHHHHhcCC-CCCCceeeeeEEEeCC------
Q 003504 506 ATSNFDRGTLLAEGKFGPVYRGFLP-GGIHVAVKVLVHGSTLTDQEAARELEYLGRI-KHPNLVPLTGYCIAGD------ 577 (815)
Q Consensus 506 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~------ 577 (815)
++++|++.+.||+|+||.||+|... +++.+|+|++... ....+.+.+|+.+++++ +||||+++++++....
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 82 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDII-EDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDD 82 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecC-chhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcce
Confidence 4678999999999999999999964 6788999998653 33456789999999999 6999999999997644
Q ss_pred eeEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCC
Q 003504 578 QRIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPP 657 (815)
Q Consensus 578 ~~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ 657 (815)
..++||||+++++|.++++... .....+++..+..++.|++.||+||| +.+
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~--------------------------~~~~~~~~~~~~~~~~ql~~al~~lH---~~~ 133 (275)
T cd06608 83 QLWLVMELCGGGSVTDLVKGLR--------------------------KKGKRLKEEWIAYILRETLRGLAYLH---ENK 133 (275)
T ss_pred EEEEEEEcCCCCcHHHHHHHHh--------------------------hcCCCCCHHHHHHHHHHHHHHHHHHh---cCC
Confidence 4799999999999999986421 11345788889999999999999999 899
Q ss_pred eeeccCCCCceEEcCCCCeeecccccceecCCCC-ccccccccccccCCcccCCCC---CCCCCcCcchhHHHHHHHHHh
Q 003504 658 IIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGL-DEEIARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELIT 733 (815)
Q Consensus 658 ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~---~~~~~~~Dv~S~Gvvl~el~t 733 (815)
++||||+|+||++++++.+||+|||.+....... ......|+..|+|||.+.... ..++.++|||||||++||+++
T Consensus 134 i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~ 213 (275)
T cd06608 134 VIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELAD 213 (275)
T ss_pred cccCCCCHHHEEEccCCeEEECCCccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHh
Confidence 9999999999999999999999999987654322 223445889999999876432 235789999999999999999
Q ss_pred CCCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 734 GKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 734 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
|+.||....+.. .+ ...... . .+. ...+...+.++.+++.+||..||++||+++++++
T Consensus 214 g~~p~~~~~~~~---~~----~~~~~~-~-----~~~--~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 214 GKPPLCDMHPMR---AL----FKIPRN-P-----PPT--LKSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred CCCCccccchHH---HH----HHhhcc-C-----CCC--CCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 999997422111 11 111110 0 111 1123346678999999999999999999999985
No 272
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=2.9e-35 Score=313.33 Aligned_cols=245 Identities=21% Similarity=0.358 Sum_probs=197.1
Q ss_pred CCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeCCCCC
Q 003504 512 RGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGN 590 (815)
Q Consensus 512 ~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gs 590 (815)
....||+|+||.||+|.. .++..||+|.+........+.+.+|+.+++.++||||+++++++..++..++|+||+++++
T Consensus 25 ~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~ 104 (297)
T cd06659 25 NYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGA 104 (297)
T ss_pred hhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCC
Confidence 345799999999999985 4688999999876555556678899999999999999999999999999999999999999
Q ss_pred hhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCceEE
Q 003504 591 LQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYL 670 (815)
Q Consensus 591 L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NIll 670 (815)
|.+++.. ..+++..+..++.|++.||+||| +.+++||||||+||++
T Consensus 105 L~~~~~~-------------------------------~~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~dl~p~Nill 150 (297)
T cd06659 105 LTDIVSQ-------------------------------TRLNEEQIATVCESVLQALCYLH---SQGVIHRDIKSDSILL 150 (297)
T ss_pred HHHHHhh-------------------------------cCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHeEE
Confidence 9987743 24678889999999999999999 8899999999999999
Q ss_pred cCCCCeeecccccceecCCCC-ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCcccccc
Q 003504 671 DMNLEPRLSDFGLAKIFGNGL-DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGN 749 (815)
Q Consensus 671 ~~~~~~kl~Dfgla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~ 749 (815)
+.++.+||+|||++....... ......|+..|+|||++.+.. ++.++|||||||++|||++|+.||....+.+.
T Consensus 151 ~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~--- 225 (297)
T cd06659 151 TLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRTP--YGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQA--- 225 (297)
T ss_pred ccCCcEEEeechhHhhcccccccccceecCccccCHHHHccCC--CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH---
Confidence 999999999999987654332 223345899999999987665 68899999999999999999999974322111
Q ss_pred HHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003504 750 LVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGL 807 (815)
Q Consensus 750 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~ 807 (815)
... +.... .+.. ..+...+.++.+++.+||+.+|++||+++++++.
T Consensus 226 ----~~~-~~~~~-----~~~~--~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 226 ----MKR-LRDSP-----PPKL--KNAHKISPVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred ----HHH-HhccC-----CCCc--cccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 111 11110 0000 1122344568899999999999999999999873
No 273
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=1e-34 Score=304.18 Aligned_cols=247 Identities=21% Similarity=0.303 Sum_probs=193.8
Q ss_pred cCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCC--c---ccHHHHHHHHHHhcCCCCCCceeeeeEEEeC--Cee
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGS--T---LTDQEAARELEYLGRIKHPNLVPLTGYCIAG--DQR 579 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~--~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~ 579 (815)
.+|++.+.||+|+||.||+|.. .++..||||.+.... . ...+.+.+|+.++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 4688899999999999999995 568899999885321 1 1234678899999999999999999988764 457
Q ss_pred EEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCee
Q 003504 580 IAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPII 659 (815)
Q Consensus 580 ~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~iv 659 (815)
++||||+++|+|.+++... ..+++....+++.|++.||+||| +.+++
T Consensus 82 ~~v~e~~~~~~L~~~l~~~------------------------------~~~~~~~~~~~~~~l~~~l~~lH---~~~i~ 128 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSY------------------------------GALTENVTRKYTRQILEGVSYLH---SNMIV 128 (265)
T ss_pred EEEEEecCCCcHHHHHHHc------------------------------CCCCHHHHHHHHHHHHHHHHHHH---hCCEe
Confidence 7999999999999998642 23567778899999999999999 88999
Q ss_pred eccCCCCceEEcCCCCeeecccccceecCCCC----ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCC
Q 003504 660 HRDIKASSVYLDMNLEPRLSDFGLAKIFGNGL----DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735 (815)
Q Consensus 660 HrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~ 735 (815)
||||||+||+++.++.+||+|||+++...... ......|+..|+|||.+.+.. ++.++|||||||++||+++|+
T Consensus 129 H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~Dv~slG~il~el~~g~ 206 (265)
T cd06652 129 HRDIKGANILRDSVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEG--YGRKADIWSVGCTVVEMLTEK 206 (265)
T ss_pred cCCCCHHHEEecCCCCEEECcCccccccccccccccccccCCCCccccChhhhcCCC--CCcchhHHHHHHHHHHHhhCC
Confidence 99999999999999999999999998654211 122345889999999987655 688999999999999999999
Q ss_pred CCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 736 KPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 736 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
.||..... .... ...... ......+......+.+++.+|+. +|++||++++|++
T Consensus 207 ~p~~~~~~------~~~~-~~~~~~---------~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 207 PPWAEFEA------MAAI-FKIATQ---------PTNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLR 260 (265)
T ss_pred CCCCccch------HHHH-HHHhcC---------CCCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence 99964211 1111 111100 01112245566778899999995 8999999999875
No 274
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=7.4e-35 Score=306.40 Aligned_cols=253 Identities=25% Similarity=0.382 Sum_probs=197.2
Q ss_pred CCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCc---c-------cHHHHHHHHHHhcCCCCCCceeeeeEEEeCC
Q 003504 509 NFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGST---L-------TDQEAARELEYLGRIKHPNLVPLTGYCIAGD 577 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~---~-------~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~ 577 (815)
+|...+.||+|+||.||+|.. .+++.||+|.+..... . ..+.+.+|+.++++++|||++++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 466789999999999999985 4688999998753211 0 1235788999999999999999999999999
Q ss_pred eeEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCC
Q 003504 578 QRIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPP 657 (815)
Q Consensus 578 ~~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ 657 (815)
..++||||+++|+|.++++.. ..+++..+..++.|++.||.||| +.+
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~------------------------------~~l~~~~~~~~~~qi~~~l~~lH---~~~ 128 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTY------------------------------GRFEEQLVRFFTEQVLEGLAYLH---SKG 128 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhc------------------------------cCCCHHHHHHHHHHHHHHHHHHh---hCC
Confidence 999999999999999999652 35677888899999999999999 789
Q ss_pred eeeccCCCCceEEcCCCCeeecccccceecCCCC---ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhC
Q 003504 658 IIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGL---DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITG 734 (815)
Q Consensus 658 ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg 734 (815)
++||||+|+||+++.++.+||+|||+++...... ......|+..|+|||.+......++.++||||||+++||+++|
T Consensus 129 i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g 208 (272)
T cd06629 129 ILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAG 208 (272)
T ss_pred eeecCCChhhEEEcCCCeEEEeeccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhC
Confidence 9999999999999999999999999998654321 1223458889999998876543368899999999999999999
Q ss_pred CCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 735 KKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 735 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
..||..... ...... .. .......+++. .....+.++.+++.+||..+|++||++.+|++
T Consensus 209 ~~p~~~~~~------~~~~~~-~~-~~~~~~~~~~~----~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 209 RRPWSDEEA------IAAMFK-LG-NKRSAPPIPPD----VSMNLSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred CCCCcCcch------HHHHHH-hh-ccccCCcCCcc----ccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 999864211 111111 11 11111111111 12234678899999999999999999999985
No 275
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=3.3e-35 Score=317.69 Aligned_cols=254 Identities=20% Similarity=0.218 Sum_probs=194.6
Q ss_pred cCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCC---cccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEE
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGS---TLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIY 583 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 583 (815)
++|.+.+.||+|+||.||+++. .+++.||+|++.+.. ......+.+|+.++..++|+||+++++++.+.+..++||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 4688899999999999999995 467889999986521 122345788999999999999999999999999999999
Q ss_pred EeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccC
Q 003504 584 DYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDI 663 (815)
Q Consensus 584 ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDl 663 (815)
||+++|+|.++++.. ...+++.....++.|++.||+||| +.+|+||||
T Consensus 81 Ey~~gg~L~~~l~~~-----------------------------~~~l~~~~~~~~~~qi~~~L~~lH---~~~iiHrDl 128 (331)
T cd05624 81 DYYVGGDLLTLLSKF-----------------------------EDRLPEDMARFYIAEMVLAIHSIH---QLHYVHRDI 128 (331)
T ss_pred eCCCCCcHHHHHHHh-----------------------------cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccC
Confidence 999999999999752 224677788889999999999999 899999999
Q ss_pred CCCceEEcCCCCeeecccccceecCCCCc--cccccccccccCCcccCCCC---CCCCCcCcchhHHHHHHHHHhCCCCC
Q 003504 664 KASSVYLDMNLEPRLSDFGLAKIFGNGLD--EEIARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELITGKKPL 738 (815)
Q Consensus 664 k~~NIll~~~~~~kl~Dfgla~~~~~~~~--~~~~~gt~~y~aPE~~~~~~---~~~~~~~Dv~S~Gvvl~el~tg~~p~ 738 (815)
||+|||++.++.+||+|||+++....... .....||+.|+|||++.+.. ..++.++|||||||++|||++|+.||
T Consensus 129 kp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf 208 (331)
T cd05624 129 KPDNVLLDMNGHIRLADFGSCLKMNQDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF 208 (331)
T ss_pred chHHEEEcCCCCEEEEeccceeeccCCCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCc
Confidence 99999999999999999999987654322 22346999999999886521 22678999999999999999999999
Q ss_pred CCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCC--CCCHHHHHH
Q 003504 739 GDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLK--RPSMQQIVG 806 (815)
Q Consensus 739 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~--RPs~~~v~~ 806 (815)
...... ........... .-.+++ .....+.++.+++.+|+..++++ |++++++++
T Consensus 209 ~~~~~~-------~~~~~i~~~~~-~~~~p~-----~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~ 265 (331)
T cd05624 209 YAESLV-------ETYGKIMNHEE-RFQFPS-----HITDVSEEAKDLIQRLICSRERRLGQNGIEDFKK 265 (331)
T ss_pred cCCCHH-------HHHHHHHcCCC-cccCCC-----ccccCCHHHHHHHHHHccCchhhcCCCCHHHHhc
Confidence 753221 11122221110 000111 11234567888999988865544 457887764
No 276
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=1.4e-34 Score=303.32 Aligned_cols=255 Identities=23% Similarity=0.381 Sum_probs=203.5
Q ss_pred cCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCC-cccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEe
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGS-TLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDY 585 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 585 (815)
++|++.+.||.|+||.||+|.. .++..+|+|++.... ....+.+.+|+++++.++|+||+++++.+...+..++|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 3688899999999999999995 468899999986532 22456789999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCC
Q 003504 586 MENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKA 665 (815)
Q Consensus 586 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~ 665 (815)
+++++|.++++... ....+++.....++.|++.||+||| +.+++||||+|
T Consensus 81 ~~~~~l~~~~~~~~---------------------------~~~~~~~~~~~~~~~ql~~al~~lh---~~~i~h~~l~p 130 (267)
T cd06610 81 LSGGSLLDIMKSSY---------------------------PRGGLDEAIIATVLKEVLKGLEYLH---SNGQIHRDIKA 130 (267)
T ss_pred cCCCcHHHHHHHhc---------------------------ccCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCH
Confidence 99999999997521 1235788888999999999999999 89999999999
Q ss_pred CceEEcCCCCeeecccccceecCCCCcc-----ccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCC
Q 003504 666 SSVYLDMNLEPRLSDFGLAKIFGNGLDE-----EIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGD 740 (815)
Q Consensus 666 ~NIll~~~~~~kl~Dfgla~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~ 740 (815)
+||++++++.+||+|||++......... ....|+..|+|||.+.... .++.++|||||||++|||++|+.||..
T Consensus 131 ~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~-~~~~~~Dv~slG~i~~~l~~g~~p~~~ 209 (267)
T cd06610 131 GNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVH-GYDFKADIWSFGITAIELATGAAPYSK 209 (267)
T ss_pred HhEEEcCCCCEEEcccchHHHhccCccccccccccccCChhhcChHHHcccc-CcCcccchHhHhHHHHHHHhCCCCccc
Confidence 9999999999999999998776543221 3345889999999887662 268899999999999999999999975
Q ss_pred CCCccccccHHHHHHHHHhcCCCCccccccccCCC-CHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 741 DYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTG-PEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 741 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
....+. .. ...... .+.+.... ....+.++.+++.+||..||++||+++++++
T Consensus 210 ~~~~~~---~~----~~~~~~------~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 210 YPPMKV---LM----LTLQND------PPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred cChhhh---HH----HHhcCC------CCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 432211 11 111111 11111111 2345678899999999999999999999985
No 277
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=7.9e-35 Score=304.69 Aligned_cols=254 Identities=26% Similarity=0.370 Sum_probs=202.6
Q ss_pred CCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCC--cccHHHHHHHHHHhcCCCCCCceeeeeEEEe--CCeeEEEE
Q 003504 509 NFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGS--TLTDQEAARELEYLGRIKHPNLVPLTGYCIA--GDQRIAIY 583 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~--~~~~~lv~ 583 (815)
+|++.+.||.|+||.||+|.. .++..||+|.+.... ....+.+..|++++++++||||+++++++.. ....+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 477889999999999999984 568899999986532 2334568889999999999999999998864 34678999
Q ss_pred EeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCC--CCCeeec
Q 003504 584 DYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGC--SPPIIHR 661 (815)
Q Consensus 584 ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~--~~~ivHr 661 (815)
||+++++|.+++.... .....+++.....++.+++.||+|||..+ +.+++||
T Consensus 81 e~~~~~~L~~~l~~~~--------------------------~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~ 134 (265)
T cd08217 81 EYCEGGDLAQLIQKCK--------------------------KERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHR 134 (265)
T ss_pred hhccCCCHHHHHHHHh--------------------------hcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceec
Confidence 9999999999996521 12346789999999999999999999554 6789999
Q ss_pred cCCCCceEEcCCCCeeecccccceecCCCCc-cccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCC
Q 003504 662 DIKASSVYLDMNLEPRLSDFGLAKIFGNGLD-EEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGD 740 (815)
Q Consensus 662 Dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~ 740 (815)
||||+||+++.++.+||+|||++........ .....|+..|+|||.+.... ++.++||||||+++|++++|+.||..
T Consensus 135 dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~--~~~~~Dv~slG~il~~l~~g~~p~~~ 212 (265)
T cd08217 135 DLKPANIFLDANNNVKLGDFGLAKILGHDSSFAKTYVGTPYYMSPEQLNHMS--YDEKSDIWSLGCLIYELCALSPPFTA 212 (265)
T ss_pred CCCHHHEEEecCCCEEEecccccccccCCcccccccccCCCccChhhhcCCC--CCchhHHHHHHHHHHHHHHCCCcccC
Confidence 9999999999999999999999987754432 33446899999999987665 68899999999999999999999975
Q ss_pred CCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003504 741 DYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGL 807 (815)
Q Consensus 741 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~ 807 (815)
... ..+. +. ..... ....+...+.++.+++.+|++.+|++||++++|++.
T Consensus 213 ~~~----~~~~---~~-~~~~~---------~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 213 RNQ----LQLA---SK-IKEGK---------FRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred cCH----HHHH---HH-HhcCC---------CCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 321 1111 11 11111 111234556789999999999999999999999863
No 278
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=1.4e-35 Score=320.78 Aligned_cols=240 Identities=22% Similarity=0.231 Sum_probs=184.5
Q ss_pred ecccCCeeeEEEEc-CCCcEEEEEEeecCCccc---HHHHHHHHHHhcCC---CCCCceeeeeEEEeCCeeEEEEEeCCC
Q 003504 516 LAEGKFGPVYRGFL-PGGIHVAVKVLVHGSTLT---DQEAARELEYLGRI---KHPNLVPLTGYCIAGDQRIAIYDYMEN 588 (815)
Q Consensus 516 ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~---~~~~~~E~~~l~~l---~H~niv~l~g~~~~~~~~~lv~ey~~~ 588 (815)
||+|+||.||+|+. .++..||||++....... ...+..|..++.+. +||||+++++++.+....++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 69999999999985 468999999986532211 22344566666655 699999999999999999999999999
Q ss_pred CChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCce
Q 003504 589 GNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSV 668 (815)
Q Consensus 589 gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NI 668 (815)
|+|..++.. ...+++.....++.|++.||+||| +.+|+||||||+||
T Consensus 81 g~L~~~l~~------------------------------~~~~~~~~~~~~~~qil~al~~LH---~~~ivHrDlkp~Ni 127 (330)
T cd05586 81 GELFWHLQK------------------------------EGRFSEDRAKFYIAELVLALEHLH---KYDIVYRDLKPENI 127 (330)
T ss_pred ChHHHHHHh------------------------------cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHe
Confidence 999998864 234677888899999999999999 89999999999999
Q ss_pred EEcCCCCeeecccccceecCCC-CccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCcccc
Q 003504 669 YLDMNLEPRLSDFGLAKIFGNG-LDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKE 747 (815)
Q Consensus 669 ll~~~~~~kl~Dfgla~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~ 747 (815)
|++.++.+||+|||+++..... .......||..|+|||.+.+... ++.++|||||||++|||++|+.||......
T Consensus 128 li~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~~DvwslGvil~elltG~~Pf~~~~~~--- 203 (330)
T cd05586 128 LLDATGHIALCDFGLSKANLTDNKTTNTFCGTTEYLAPEVLLDEKG-YTKHVDFWSLGVLVFEMCCGWSPFYAEDTQ--- 203 (330)
T ss_pred EECCCCCEEEecCCcCcCCCCCCCCccCccCCccccCHHHHcCCCC-CCCccceeccccEEEEeccCCCCCCCCCHH---
Confidence 9999999999999999764322 23344569999999999875432 588999999999999999999999753221
Q ss_pred ccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCC----HHHHHH
Q 003504 748 GNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPS----MQQIVG 806 (815)
Q Consensus 748 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs----~~~v~~ 806 (815)
.......... ..+. ....+.++.+++.+||+.||++||+ +.++++
T Consensus 204 ----~~~~~i~~~~-------~~~~---~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 204 ----QMYRNIAFGK-------VRFP---KNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred ----HHHHHHHcCC-------CCCC---CccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 1111111111 0011 1123456789999999999999994 555543
No 279
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=6.6e-35 Score=310.34 Aligned_cols=265 Identities=22% Similarity=0.296 Sum_probs=199.4
Q ss_pred cCCCCCCeecccCCeeeEEEEcC-CCcEEEEEEeecCCcc--cHHHHHHHHHHhcCCCCCCceeeeeEEEeC--CeeEEE
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFLP-GGIHVAVKVLVHGSTL--TDQEAARELEYLGRIKHPNLVPLTGYCIAG--DQRIAI 582 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lv 582 (815)
++|+..+.||+|+||.||+|... +++.||+|.++..... ....+.+|+.++++++||||+++++++... ...++|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 46888899999999999999964 6889999998653322 234567899999999999999999999887 789999
Q ss_pred EEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecc
Q 003504 583 YDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRD 662 (815)
Q Consensus 583 ~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrD 662 (815)
|||+++ +|.+++... ...+++.....++.|++.||+||| +.+++|||
T Consensus 85 ~e~~~~-~L~~~~~~~-----------------------------~~~l~~~~~~~i~~qi~~aL~~LH---~~~i~H~d 131 (293)
T cd07843 85 MEYVEH-DLKSLMETM-----------------------------KQPFLQSEVKCLMLQLLSGVAHLH---DNWILHRD 131 (293)
T ss_pred ehhcCc-CHHHHHHhc-----------------------------cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecc
Confidence 999985 999988642 225788999999999999999999 78999999
Q ss_pred CCCCceEEcCCCCeeecccccceecCCCC-ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCC
Q 003504 663 IKASSVYLDMNLEPRLSDFGLAKIFGNGL-DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDD 741 (815)
Q Consensus 663 lk~~NIll~~~~~~kl~Dfgla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~ 741 (815)
|||+||+++.++.+||+|||+++...... ......++..|+|||.+.+... .+.++||||||+++|||++|+.||...
T Consensus 132 l~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~-~~~~~Di~slG~~l~~l~~g~~~f~~~ 210 (293)
T cd07843 132 LKTSNLLLNNRGILKICDFGLAREYGSPLKPYTQLVVTLWYRAPELLLGAKE-YSTAIDMWSVGCIFAELLTKKPLFPGK 210 (293)
T ss_pred CCHHHEEECCCCcEEEeecCceeeccCCccccccccccccccCchhhcCCcc-ccchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 99999999999999999999998765432 2333457889999998865442 578999999999999999999999754
Q ss_pred CCccccccHHHHHH-----------HHH--hcCCCCccccccccCCCCHH-HHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 742 YPEEKEGNLVSWVR-----------GLV--RNNKGSRAIDPKIRDTGPEK-QMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 742 ~~~~~~~~~~~~~~-----------~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
...+....+...+. .+. ............+....+.. ....+.+++.+||+.+|++||++.|+++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 211 SEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred ChHHHHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 33221111111100 000 00000000011111111221 3667889999999999999999999975
No 280
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=1.3e-34 Score=306.41 Aligned_cols=254 Identities=24% Similarity=0.375 Sum_probs=195.3
Q ss_pred cCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCc-ccHHHHHHHHHH-hcCCCCCCceeeeeEEEeCCeeEEEEE
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGST-LTDQEAARELEY-LGRIKHPNLVPLTGYCIAGDQRIAIYD 584 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~-~~~~~~~~E~~~-l~~l~H~niv~l~g~~~~~~~~~lv~e 584 (815)
++|++.+.||+|+||.||+|+. .+|..||+|++..... .....+..|+.+ ++..+||||+++++++......++|||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 3688889999999999999996 4689999999875422 234456667665 566789999999999999999999999
Q ss_pred eCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCC-CeeeccC
Q 003504 585 YMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSP-PIIHRDI 663 (815)
Q Consensus 585 y~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~-~ivHrDl 663 (815)
|++ |+|.++++... .....+++.....++.|++.||+||| +. +++||||
T Consensus 81 ~~~-~~l~~~l~~~~--------------------------~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~~i~h~dl 130 (283)
T cd06617 81 VMD-TSLDKFYKKVY--------------------------DKGLTIPEDILGKIAVSIVKALEYLH---SKLSVIHRDV 130 (283)
T ss_pred hhc-ccHHHHHHHhc--------------------------cCCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCC
Confidence 997 68988886421 11346789999999999999999999 65 8999999
Q ss_pred CCCceEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCCC--CCCCCcCcchhHHHHHHHHHhCCCCCCCC
Q 003504 664 KASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDS--DFPTPKSDVYCYGVVLLELITGKKPLGDD 741 (815)
Q Consensus 664 k~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~ 741 (815)
||+||+++.++.+||+|||+++............|+..|+|||.+.+.. ..++.++|||||||++|||++|+.||...
T Consensus 131 kp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~ 210 (283)
T cd06617 131 KPSNVLINRNGQVKLCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSW 210 (283)
T ss_pred CHHHEEECCCCCEEEeecccccccccccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCcc
Confidence 9999999999999999999998765433334456889999999876522 22578999999999999999999998642
Q ss_pred CCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 742 YPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 742 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
.. . . .......... .+.+. ....+.++.+++.+||..+|++||++.++++
T Consensus 211 ~~--~---~-~~~~~~~~~~------~~~~~---~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 211 KT--P---F-QQLKQVVEEP------SPQLP---AEKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred cc--C---H-HHHHHHHhcC------CCCCC---ccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11 0 1 1111111110 11111 1234567899999999999999999999986
No 281
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=1.4e-34 Score=309.78 Aligned_cols=248 Identities=24% Similarity=0.330 Sum_probs=196.7
Q ss_pred cCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCcc---cHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEE
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGSTL---TDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIY 583 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~---~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 583 (815)
..|+..+.||+|+||.||+|.. .+++.||+|.+...... ..+.+.+|+++++.++||||+++.++|...+..++|+
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 4578889999999999999985 46889999998653322 2356889999999999999999999999999999999
Q ss_pred EeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccC
Q 003504 584 DYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDI 663 (815)
Q Consensus 584 ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDl 663 (815)
||++ |++.+++... ...+++..+..++.|++.||.||| +.+++||||
T Consensus 95 e~~~-g~l~~~~~~~-----------------------------~~~l~~~~~~~~~~ql~~~L~~LH---~~~i~H~dl 141 (307)
T cd06607 95 EYCL-GSASDILEVH-----------------------------KKPLQEVEIAAICHGALQGLAYLH---SHERIHRDI 141 (307)
T ss_pred HhhC-CCHHHHHHHc-----------------------------ccCCCHHHHHHHHHHHHHHHHHHH---HCCceecCC
Confidence 9997 5777777531 235788999999999999999999 889999999
Q ss_pred CCCceEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCC-CCCCCCcCcchhHHHHHHHHHhCCCCCCCCC
Q 003504 664 KASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPD-SDFPTPKSDVYCYGVVLLELITGKKPLGDDY 742 (815)
Q Consensus 664 k~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~ 742 (815)
+|+||++++++.+||+|||++...... ....|+..|+|||.+.+. ...++.++||||||+++||+++|+.||....
T Consensus 142 ~p~nIl~~~~~~~kL~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~ 218 (307)
T cd06607 142 KAGNILLTEPGTVKLADFGSASLVSPA---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN 218 (307)
T ss_pred CcccEEECCCCCEEEeecCcceecCCC---CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCcc
Confidence 999999999999999999999765432 234578899999987532 2236889999999999999999999986532
Q ss_pred CccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003504 743 PEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGL 807 (815)
Q Consensus 743 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~ 807 (815)
... ......... .+. ..+..++.++.+++.+||..+|++||++++++..
T Consensus 219 ~~~-------~~~~~~~~~------~~~---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 219 AMS-------ALYHIAQND------SPT---LSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred HHH-------HHHHHhcCC------CCC---CCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 111 111111110 011 1133466789999999999999999999999863
No 282
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=4.7e-35 Score=309.98 Aligned_cols=261 Identities=21% Similarity=0.276 Sum_probs=196.6
Q ss_pred CCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCc--ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEe
Q 003504 509 NFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGST--LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDY 585 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 585 (815)
+|+..+.||.|++|.||+|+. .++..||||.+..... .....+.+|++++++++||||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 477889999999999999985 4688999998864322 2235788999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCC
Q 003504 586 MENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKA 665 (815)
Q Consensus 586 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~ 665 (815)
+. ++|.+++... ....+++.....++.|++.||+||| ..+++||||+|
T Consensus 81 ~~-~~l~~~~~~~----------------------------~~~~l~~~~~~~~~~~i~~~l~~lh---~~~i~H~~l~p 128 (284)
T cd07860 81 LH-QDLKKFMDAS----------------------------PLSGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKP 128 (284)
T ss_pred cc-cCHHHHHHhC----------------------------CCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCH
Confidence 96 6899988652 1345788999999999999999999 88999999999
Q ss_pred CceEEcCCCCeeecccccceecCCCC-ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCc
Q 003504 666 SSVYLDMNLEPRLSDFGLAKIFGNGL-DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPE 744 (815)
Q Consensus 666 ~NIll~~~~~~kl~Dfgla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~ 744 (815)
+||+++.++.+||+|||+++...... ......++..|+|||.+.+... ++.++|||||||++||++||+.||......
T Consensus 129 ~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~~Dv~slG~il~~l~tg~~p~~~~~~~ 207 (284)
T cd07860 129 QNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY-YSTAVDIWSLGCIFAEMVTRRALFPGDSEI 207 (284)
T ss_pred HHEEECCCCCEEEeeccchhhcccCccccccccccccccCCeEEecCCC-CCcHHHHHHHHHHHHHHHHCCCCCCCCCHH
Confidence 99999999999999999988664332 2233347889999998765432 578899999999999999999999753321
Q ss_pred cccccHHHHHHHHHhcC---------------CCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 745 EKEGNLVSWVRGLVRNN---------------KGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 745 ~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
. ...+.....-... .........+.. .......++.+++.+||+.||++||+++++++
T Consensus 208 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 208 D---QLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSK-VVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred H---HHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHH-HcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 1 1111111000000 000000000000 01123456789999999999999999999975
No 283
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=5.6e-35 Score=309.75 Aligned_cols=260 Identities=21% Similarity=0.251 Sum_probs=200.1
Q ss_pred CCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCC--cccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEe
Q 003504 509 NFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGS--TLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDY 585 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 585 (815)
+|++.+.||+|+||.||+|.. .+|..||||++.... ....+.+.+|+.++++++||||+++++++..+...++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 477889999999999999995 468999999987643 23346789999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCC
Q 003504 586 MENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKA 665 (815)
Q Consensus 586 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~ 665 (815)
+ +++|.+++... ...+++..+..++.|+++||+||| +.+++|+||||
T Consensus 81 ~-~~~L~~~~~~~-----------------------------~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p 127 (286)
T cd07832 81 M-PSDLSEVLRDE-----------------------------ERPLPEAQVKSYMRMLLKGVAYMH---ANGIMHRDLKP 127 (286)
T ss_pred c-CCCHHHHHHhc-----------------------------CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCH
Confidence 9 99999998652 245788999999999999999999 88999999999
Q ss_pred CceEEcCCCCeeecccccceecCCCC--ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCC
Q 003504 666 SSVYLDMNLEPRLSDFGLAKIFGNGL--DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYP 743 (815)
Q Consensus 666 ~NIll~~~~~~kl~Dfgla~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~ 743 (815)
+||+++.++.++|+|||.+....... ......|+..|+|||.+.+... ++.++||||+|+++||+++|+.||.....
T Consensus 128 ~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~~Di~slG~~l~~l~tg~~~~~~~~~ 206 (286)
T cd07832 128 ANLLISADGVLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLYGARK-YDPGVDLWAVGCIFAELLNGSPLFPGEND 206 (286)
T ss_pred HHEEEcCCCcEEEeeeeecccccCCCCCccccccCcccccCceeeecccc-CCchhHHHHHHHHHHHHHcCCcCcCCCCH
Confidence 99999999999999999998765432 1334468999999998865432 58899999999999999999888764322
Q ss_pred ccccccHHHHHHHHHhcC------------CCCccccccccC----CCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 744 EEKEGNLVSWVRGLVRNN------------KGSRAIDPKIRD----TGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 744 ~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~----~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
.+. ...+....... .......+.-.. ....+...++.+++.+|+..+|++||+++++++
T Consensus 207 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~ 281 (286)
T cd07832 207 IEQ----LAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR 281 (286)
T ss_pred HHH----HHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 111 11111100000 000000000000 001234578999999999999999999999975
No 284
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=9e-35 Score=304.49 Aligned_cols=252 Identities=25% Similarity=0.403 Sum_probs=202.5
Q ss_pred CCCCCCeecccCCeeeEEEEcC-CCcEEEEEEeecCC-cccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeC
Q 003504 509 NFDRGTLLAEGKFGPVYRGFLP-GGIHVAVKVLVHGS-TLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYM 586 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 586 (815)
+|+..+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|++++++++||||+++++++......++|+||+
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYM 81 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEec
Confidence 5777889999999999999965 68899999987643 234567889999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCC-CCeeeccCCC
Q 003504 587 ENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCS-PPIIHRDIKA 665 (815)
Q Consensus 587 ~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~-~~ivHrDlk~ 665 (815)
++++|.+++... ...++.....+++.|++.||+||| + .+++||||||
T Consensus 82 ~~~~L~~~~~~~-----------------------------~~~~~~~~~~~~~~~l~~~l~~lH---~~~~i~H~dl~~ 129 (265)
T cd06605 82 DGGSLDKILKEV-----------------------------QGRIPERILGKIAVAVLKGLTYLH---EKHKIIHRDVKP 129 (265)
T ss_pred CCCcHHHHHHHc-----------------------------cCCCCHHHHHHHHHHHHHHHHHHc---CCCCeecCCCCH
Confidence 999999999752 135677788899999999999999 7 8999999999
Q ss_pred CceEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCcc
Q 003504 666 SSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEE 745 (815)
Q Consensus 666 ~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~ 745 (815)
+||+++.++.+||+|||.+.......... ..++..|+|||.+.+.. ++.++||||||+++|++++|+.||.....
T Consensus 130 ~ni~~~~~~~~~l~d~g~~~~~~~~~~~~-~~~~~~y~~PE~~~~~~--~~~~~Dv~slG~~l~~l~~g~~p~~~~~~-- 204 (265)
T cd06605 130 SNILVNSRGQIKLCDFGVSGQLVNSLAKT-FVGTSSYMAPERIQGND--YSVKSDIWSLGLSLIELATGRFPYPPEND-- 204 (265)
T ss_pred HHEEECCCCCEEEeecccchhhHHHHhhc-ccCChhccCHHHHcCCC--CCchhhHHHHHHHHHHHHhCCCCCCcccc--
Confidence 99999999999999999987654332222 56889999999987765 78999999999999999999999975321
Q ss_pred ccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 746 KEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 746 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
........++...... .+.+ .....+.++.+++.+||..+|++||++.+++.
T Consensus 205 ~~~~~~~~~~~~~~~~------~~~~---~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 205 PPDGIFELLQYIVNEP------PPRL---PSGKFSPDFQDFVNLCLIKDPRERPSYKELLE 256 (265)
T ss_pred ccccHHHHHHHHhcCC------CCCC---ChhhcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence 1122233333322211 0111 11125677899999999999999999999975
No 285
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=1.1e-34 Score=312.40 Aligned_cols=201 Identities=20% Similarity=0.356 Sum_probs=160.4
Q ss_pred CCeecccCCeeeEEEEcC---CCcEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCceeeeeEEEe--CCeeEEEEEeCC
Q 003504 513 GTLLAEGKFGPVYRGFLP---GGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIA--GDQRIAIYDYME 587 (815)
Q Consensus 513 ~~~ig~G~~g~Vy~~~~~---~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~--~~~~~lv~ey~~ 587 (815)
+..||+|+||.||+|+.. ++..||+|.+.... ....+.+|++++++++||||+++++++.. ....++|+||++
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE 83 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC
Confidence 468999999999999964 45789999886532 23467899999999999999999999864 456789999987
Q ss_pred CCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCc
Q 003504 588 NGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASS 667 (815)
Q Consensus 588 ~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~N 667 (815)
+ +|.+++....... .......+++.....++.|++.||+||| +.+|+||||||+|
T Consensus 84 ~-~l~~~~~~~~~~~---------------------~~~~~~~l~~~~~~~i~~qi~~aL~~lH---~~~ivH~Dlkp~N 138 (317)
T cd07867 84 H-DLWHIIKFHRASK---------------------ANKKPMQLPRSMVKSLLYQILDGIHYLH---ANWVLHRDLKPAN 138 (317)
T ss_pred C-cHHHHHHhhhccc---------------------cCCCCccCCHHHHHHHHHHHHHHHHHHH---hCCEEcCCCCHHH
Confidence 5 7888775321100 0011235788889999999999999999 8899999999999
Q ss_pred eEE----cCCCCeeecccccceecCCCC----ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCC
Q 003504 668 VYL----DMNLEPRLSDFGLAKIFGNGL----DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLG 739 (815)
Q Consensus 668 Ill----~~~~~~kl~Dfgla~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~ 739 (815)
|++ +.++.+||+|||+++...... ......||+.|+|||++.+... ++.++|||||||++|||+||+.||.
T Consensus 139 il~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~-~~~~~DiwSlG~il~el~tg~~~f~ 217 (317)
T cd07867 139 ILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARH-YTKAIDIWAIGCIFAELLTSEPIFH 217 (317)
T ss_pred EEEccCCCCCCcEEEeeccceeccCCCcccccccCcceecccccCcHHhcCCCc-cCcHHHHHhHHHHHHHHHhCCCCcc
Confidence 999 566789999999998765332 1233468999999998865432 6889999999999999999999997
Q ss_pred CC
Q 003504 740 DD 741 (815)
Q Consensus 740 ~~ 741 (815)
..
T Consensus 218 ~~ 219 (317)
T cd07867 218 CR 219 (317)
T ss_pred cc
Confidence 53
No 286
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=5.4e-35 Score=309.52 Aligned_cols=261 Identities=21% Similarity=0.259 Sum_probs=195.4
Q ss_pred CCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCc--ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEe
Q 003504 509 NFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGST--LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDY 585 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 585 (815)
+|+..+.||+|+||.||+|.. .+|..||+|.+..... .....+.+|++++++++||||+++++++.+....++|+||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 477788999999999999995 4688999999865322 2235678899999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCC
Q 003504 586 MENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKA 665 (815)
Q Consensus 586 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~ 665 (815)
++ ++|.+++... ...+++.....++.|+++||.||| +.+++||||||
T Consensus 81 ~~-~~l~~~~~~~-----------------------------~~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dl~~ 127 (284)
T cd07839 81 CD-QDLKKYFDSC-----------------------------NGDIDPEIVKSFMFQLLKGLAFCH---SHNVLHRDLKP 127 (284)
T ss_pred CC-CCHHHHHHhc-----------------------------CCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCH
Confidence 97 4888887542 235788899999999999999999 88999999999
Q ss_pred CceEEcCCCCeeecccccceecCCCC-ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCc
Q 003504 666 SSVYLDMNLEPRLSDFGLAKIFGNGL-DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPE 744 (815)
Q Consensus 666 ~NIll~~~~~~kl~Dfgla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~ 744 (815)
+||+++.++.+||+|||+++...... ......++..|+|||.+.+... ++.++|||||||++|||++|+.|+......
T Consensus 128 ~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~~DiwslG~il~~l~tg~~p~~~~~~~ 206 (284)
T cd07839 128 QNLLINKNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKL-YSTSIDMWSAGCIFAELANAGRPLFPGNDV 206 (284)
T ss_pred HHEEEcCCCcEEECccchhhccCCCCCCcCCCccccCCcChHHHhCCcc-cCcHHHHHHHHHHHHHHHhcCCCCcCCCCH
Confidence 99999999999999999998664332 2233457889999998866432 588999999999999999999886542221
Q ss_pred cccccHHHHHHHH----------HhcCCCCccccccccC-----CCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 745 EKEGNLVSWVRGL----------VRNNKGSRAIDPKIRD-----TGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 745 ~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
+ ..+....+.. ....... ..-+.... ......+.++.+++.+||+.||.+|||++++++
T Consensus 207 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 207 D--DQLKRIFRLLGTPTEESWPGVSKLPDY-KPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred H--HHHHHHHHHhCCCChHHhHHhhhcccc-cccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 1 1111000000 0000000 00000100 011234567889999999999999999999975
No 287
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=9.7e-35 Score=310.79 Aligned_cols=252 Identities=23% Similarity=0.281 Sum_probs=197.3
Q ss_pred cCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCc---ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEE
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGST---LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIY 583 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 583 (815)
++|+..+.||+|+||.||+|.. .+++.||+|.+..... .....+.+|++++..++||||+++++++...+..++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 3688889999999999999995 4578999999875432 22346789999999999999999999999999999999
Q ss_pred EeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccC
Q 003504 584 DYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDI 663 (815)
Q Consensus 584 ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDl 663 (815)
||+++|+|.+++.. ...+++.....++.|++.||+||| +.+++||||
T Consensus 81 e~~~g~~L~~~l~~------------------------------~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl 127 (305)
T cd05609 81 EYVEGGDCATLLKN------------------------------IGALPVDMARMYFAETVLALEYLH---NYGIVHRDL 127 (305)
T ss_pred ecCCCCcHHHHHHH------------------------------cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCC
Confidence 99999999999964 234678888899999999999999 789999999
Q ss_pred CCCceEEcCCCCeeecccccceecCCCC----------------ccccccccccccCCcccCCCCCCCCCcCcchhHHHH
Q 003504 664 KASSVYLDMNLEPRLSDFGLAKIFGNGL----------------DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVV 727 (815)
Q Consensus 664 k~~NIll~~~~~~kl~Dfgla~~~~~~~----------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvv 727 (815)
||+||+++.++.+||+|||+++...... ......|+..|+|||.+.... ++.++|||||||+
T Consensus 128 ~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~Di~slG~v 205 (305)
T cd05609 128 KPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQG--YGKPVDWWAMGII 205 (305)
T ss_pred chHHEEECCCCCEEEeeCCCccccCcCccccccccccccchhhccccCCccCccccCchhccCCC--CCchhhHHHHHHH
Confidence 9999999999999999999987421100 011234788999999987655 6899999999999
Q ss_pred HHHHHhCCCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003504 728 LLELITGKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGL 807 (815)
Q Consensus 728 l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~ 807 (815)
+||+++|+.||.+.... .+........ ...+.. ....+.++.+++.+||+.+|++||++.++.+.
T Consensus 206 l~el~~g~~pf~~~~~~-------~~~~~~~~~~----~~~~~~----~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~l 270 (305)
T cd05609 206 LYEFLVGCVPFFGDTPE-------ELFGQVISDD----IEWPEG----DEALPADAQDLISRLLRQNPLERLGTGGAFEV 270 (305)
T ss_pred HHHHHhCCCCCCCCCHH-------HHHHHHHhcc----cCCCCc----cccCCHHHHHHHHHHhccChhhccCccCHHHH
Confidence 99999999999753321 1122211111 001111 11345678999999999999999997666665
Q ss_pred HH
Q 003504 808 LK 809 (815)
Q Consensus 808 L~ 809 (815)
|+
T Consensus 271 l~ 272 (305)
T cd05609 271 KQ 272 (305)
T ss_pred Hh
Confidence 54
No 288
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=1.4e-34 Score=305.16 Aligned_cols=247 Identities=24% Similarity=0.417 Sum_probs=198.2
Q ss_pred CCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCC-cccHHHHHHHHHHhcCCC---CCCceeeeeEEEeCCeeEEEE
Q 003504 509 NFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGS-TLTDQEAARELEYLGRIK---HPNLVPLTGYCIAGDQRIAIY 583 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~---H~niv~l~g~~~~~~~~~lv~ 583 (815)
.|+..+.||+|+||.||+|.. .++..||+|.+.... ......+.+|+.++++++ |||++++++++......++||
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 467788999999999999995 578999999986542 233457889999999986 999999999999999999999
Q ss_pred EeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccC
Q 003504 584 DYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDI 663 (815)
Q Consensus 584 ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDl 663 (815)
||+++++|.++++. ..+++.....++.|++.||.||| +.+++||||
T Consensus 82 e~~~~~~L~~~~~~-------------------------------~~l~~~~~~~i~~~i~~~l~~lh---~~~i~H~dl 127 (277)
T cd06917 82 EYAEGGSVRTLMKA-------------------------------GPIAEKYISVIIREVLVALKYIH---KVGVIHRDI 127 (277)
T ss_pred ecCCCCcHHHHHHc-------------------------------cCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCc
Confidence 99999999998853 14778889999999999999999 889999999
Q ss_pred CCCceEEcCCCCeeecccccceecCCCC-ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCC
Q 003504 664 KASSVYLDMNLEPRLSDFGLAKIFGNGL-DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDY 742 (815)
Q Consensus 664 k~~NIll~~~~~~kl~Dfgla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~ 742 (815)
+|+||+++.++.++|+|||++....... ......|+..|+|||.+..... ++.++|||||||++|||++|+.||....
T Consensus 128 ~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~~Dv~slG~~l~~ll~g~~p~~~~~ 206 (277)
T cd06917 128 KAANILVTNTGNVKLCDFGVAALLNQNSSKRSTFVGTPYWMAPEVITEGKY-YDTKADIWSLGITIYEMATGNPPYSDVD 206 (277)
T ss_pred CHHHEEEcCCCCEEEccCCceeecCCCccccccccCCcceeCHHHhccCCc-cccchhHHHHHHHHHHHHhCCCCCCCCC
Confidence 9999999999999999999998765433 2233458899999998865432 5889999999999999999999997532
Q ss_pred CccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 743 PEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 743 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
.. .+... . .....+.+.. ...+.++.+++.+||..||++||++.++++
T Consensus 207 ~~-------~~~~~-~-----~~~~~~~~~~---~~~~~~~~~~i~~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 207 AF-------RAMML-I-----PKSKPPRLED---NGYSKLLREFVAACLDEEPKERLSAEELLK 254 (277)
T ss_pred hh-------hhhhc-c-----ccCCCCCCCc---ccCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence 21 11110 0 0001111211 124567899999999999999999999975
No 289
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=6.8e-35 Score=317.42 Aligned_cols=263 Identities=21% Similarity=0.251 Sum_probs=192.9
Q ss_pred HhcCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCc--ccHHHHHHHHHHhcCCCCCCceeeeeEEEeC------
Q 003504 506 ATSNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGST--LTDQEAARELEYLGRIKHPNLVPLTGYCIAG------ 576 (815)
Q Consensus 506 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~------ 576 (815)
..++|+..+.||+|+||.||+|.. .++..||||.+..... ...+.+.+|++++++++||||+++++++...
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07878 13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENF 92 (343)
T ss_pred hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccccc
Confidence 456899999999999999999984 5688999999865321 2335677899999999999999999987643
Q ss_pred CeeEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCC
Q 003504 577 DQRIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSP 656 (815)
Q Consensus 577 ~~~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~ 656 (815)
...++++|++ +++|.+++.. ..+++.....++.|++.||+||| +.
T Consensus 93 ~~~~~~~~~~-~~~l~~~~~~-------------------------------~~l~~~~~~~i~~qi~~aL~~LH---~~ 137 (343)
T cd07878 93 NEVYLVTNLM-GADLNNIVKC-------------------------------QKLSDEHVQFLIYQLLRGLKYIH---SA 137 (343)
T ss_pred CcEEEEeecC-CCCHHHHHhc-------------------------------CCCCHHHHHHHHHHHHHHHHHHH---HC
Confidence 3468899987 6789887743 24678888999999999999999 89
Q ss_pred CeeeccCCCCceEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCC
Q 003504 657 PIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKK 736 (815)
Q Consensus 657 ~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~ 736 (815)
+|+||||||+||+++.++.+||+|||+++..... .....||+.|+|||++.+... ++.++|||||||++|||++|+.
T Consensus 138 ~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~-~~~~~DiwslG~il~el~~g~~ 214 (343)
T cd07878 138 GIIHRDLKPSNVAVNEDCELRILDFGLARQADDE--MTGYVATRWYRAPEIMLNWMH-YNQTVDIWSVGCIMAELLKGKA 214 (343)
T ss_pred CeecccCChhhEEECCCCCEEEcCCccceecCCC--cCCccccccccCchHhcCCcc-CCchhhhHhHHHHHHHHHHCCC
Confidence 9999999999999999999999999999876432 234468999999999876332 6889999999999999999999
Q ss_pred CCCCCCCccccccHHHHHH-------HHHhcCCCCcccc--ccccCC----CCHHHHHHHHHHHhhccccCCCCCCCHHH
Q 003504 737 PLGDDYPEEKEGNLVSWVR-------GLVRNNKGSRAID--PKIRDT----GPEKQMEEALKIGYLCTADLPLKRPSMQQ 803 (815)
Q Consensus 737 p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~--~~~~~~----~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~ 803 (815)
||......+....+..... ............. +..... ........+.+++.+|+..||++|||++|
T Consensus 215 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~e 294 (343)
T cd07878 215 LFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASE 294 (343)
T ss_pred CCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHH
Confidence 9975322111101100000 0000000000000 000000 00112345789999999999999999999
Q ss_pred HHH
Q 003504 804 IVG 806 (815)
Q Consensus 804 v~~ 806 (815)
+++
T Consensus 295 ll~ 297 (343)
T cd07878 295 ALA 297 (343)
T ss_pred Hhc
Confidence 985
No 290
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=2.4e-34 Score=301.11 Aligned_cols=251 Identities=29% Similarity=0.439 Sum_probs=199.3
Q ss_pred CCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCcc--cHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEe
Q 003504 509 NFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGSTL--TDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDY 585 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 585 (815)
+|...+.||+|+||.||+|.. .+++.||+|.+...... ..+.+.+|+.++++++|+||+++++++...+..++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 477789999999999999985 46889999998765433 456789999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCC
Q 003504 586 MENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKA 665 (815)
Q Consensus 586 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~ 665 (815)
+++++|.++++. ...+++..+..++.+++.||+||| +.+++||||+|
T Consensus 81 ~~~~~L~~~~~~------------------------------~~~~~~~~~~~i~~~i~~~l~~lh---~~~i~H~dl~~ 127 (264)
T cd06626 81 CSGGTLEELLEH------------------------------GRILDEHVIRVYTLQLLEGLAYLH---SHGIVHRDIKP 127 (264)
T ss_pred CCCCcHHHHHhh------------------------------cCCCChHHHHHHHHHHHHHHHHHH---HCCcccCCCCH
Confidence 999999999864 224677888999999999999999 88999999999
Q ss_pred CceEEcCCCCeeecccccceecCCCCcc-----ccccccccccCCcccCCCC-CCCCCcCcchhHHHHHHHHHhCCCCCC
Q 003504 666 SSVYLDMNLEPRLSDFGLAKIFGNGLDE-----EIARGSPGYIPPEFAQPDS-DFPTPKSDVYCYGVVLLELITGKKPLG 739 (815)
Q Consensus 666 ~NIll~~~~~~kl~Dfgla~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~p~~ 739 (815)
+||+++.++.+||+|||++......... ....++..|+|||++.+.. ...+.++||||||+++||+++|+.||.
T Consensus 128 ~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~ 207 (264)
T cd06626 128 ANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWS 207 (264)
T ss_pred HHEEECCCCCEEEcccccccccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCcc
Confidence 9999999999999999999876543221 1345788999999987654 236889999999999999999999996
Q ss_pred CCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 740 DDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 740 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
..... ........ .. ..+.+.. ....+..+.+++.+||+.+|++||++.+++.
T Consensus 208 ~~~~~------~~~~~~~~-~~-----~~~~~~~--~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 208 ELDNE------FQIMFHVG-AG-----HKPPIPD--SLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred CCcch------HHHHHHHh-cC-----CCCCCCc--ccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 42211 11111111 00 0111111 1123567789999999999999999999874
No 291
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=7.3e-35 Score=308.17 Aligned_cols=261 Identities=19% Similarity=0.221 Sum_probs=195.2
Q ss_pred CCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCC-cccHHHHHHHHHHhcCCC-CCCceeeeeEEEeC--CeeEEEEE
Q 003504 510 FDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGS-TLTDQEAARELEYLGRIK-HPNLVPLTGYCIAG--DQRIAIYD 584 (815)
Q Consensus 510 ~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~--~~~~lv~e 584 (815)
|.+.+.||+|+||.||+|.. .++..||+|.++... ........+|+.++.++. |||++++++++.+. +..++|+|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 55678999999999999994 568899999986532 222334557899999985 99999999999987 78999999
Q ss_pred eCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCC
Q 003504 585 YMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIK 664 (815)
Q Consensus 585 y~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk 664 (815)
|++ |+|.+++... ...++|..+..++.|++.||+||| +.+++||||+
T Consensus 81 ~~~-~~l~~~l~~~-----------------------------~~~~~~~~~~~~~~qi~~~L~~LH---~~~i~H~dl~ 127 (282)
T cd07831 81 LMD-MNLYELIKGR-----------------------------KRPLPEKRVKSYMYQLLKSLDHMH---RNGIFHRDIK 127 (282)
T ss_pred cCC-ccHHHHHHhc-----------------------------cCCCCHHHHHHHHHHHHHHHHHHH---HCCceecccC
Confidence 997 5888888642 235789999999999999999999 7899999999
Q ss_pred CCceEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCc
Q 003504 665 ASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPE 744 (815)
Q Consensus 665 ~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~ 744 (815)
|+||+++. +.+||+|||+++............++..|+|||.+.... .++.++|||||||++|||++|+.||....+.
T Consensus 128 p~ni~l~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~~Di~slGv~l~el~~~~~p~~~~~~~ 205 (282)
T cd07831 128 PENILIKD-DILKLADFGSCRGIYSKPPYTEYISTRWYRAPECLLTDG-YYGPKMDIWAVGCVFFEILSLFPLFPGTNEL 205 (282)
T ss_pred HHHEEEcC-CCeEEEecccccccccCCCcCCCCCCcccCChhHhhcCC-CCCcchhHHHHHHHHHHHHcCCcCCCCCCHH
Confidence 99999999 999999999998765444334455889999999765433 2688999999999999999999999764332
Q ss_pred cccccHH--------HHHHHHHhcCCCCccccccccC----CCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 745 EKEGNLV--------SWVRGLVRNNKGSRAIDPKIRD----TGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 745 ~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
+....+. .|. .............+.... ......+.++.+++.+||+.+|++||+++++++
T Consensus 206 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 206 DQIAKIHDVLGTPDAEVL-KKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred HHHHHHHHHcCCCCHHHH-HhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 2111111 110 001000000000010000 001235688999999999999999999999975
No 292
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=1.6e-34 Score=304.73 Aligned_cols=246 Identities=23% Similarity=0.336 Sum_probs=198.3
Q ss_pred CCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCC-cccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeC
Q 003504 509 NFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGS-TLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYM 586 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 586 (815)
-|+..+.||+|+||.||+|.. .++..||+|.+.... ......+.+|+.++.+++||||+++++++..+...++||||+
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL 84 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeC
Confidence 366778999999999999985 568899999876432 223457889999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCC
Q 003504 587 ENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKAS 666 (815)
Q Consensus 587 ~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~ 666 (815)
++|+|.+++.. ..+++.....++.+++.|+.||| +.+++|+||+|+
T Consensus 85 ~~~~l~~~i~~-------------------------------~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~ 130 (277)
T cd06641 85 GGGSALDLLEP-------------------------------GPLDETQIATILREILKGLDYLH---SEKKIHRDIKAA 130 (277)
T ss_pred CCCcHHHHHhc-------------------------------CCCCHHHHHHHHHHHHHHHHHHc---cCCeecCCCCHH
Confidence 99999999853 24678889999999999999999 899999999999
Q ss_pred ceEEcCCCCeeecccccceecCCCC-ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCcc
Q 003504 667 SVYLDMNLEPRLSDFGLAKIFGNGL-DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEE 745 (815)
Q Consensus 667 NIll~~~~~~kl~Dfgla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~ 745 (815)
||+++.++.++|+|||++....... ......|+..|+|||.+.+.. .+.++|||||||++||+++|..||....+.
T Consensus 131 Ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~--~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~- 207 (277)
T cd06641 131 NVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSA--YDSKADIWSLGITAIELAKGEPPHSELHPM- 207 (277)
T ss_pred hEEECCCCCEEEeecccceecccchhhhccccCCccccChhhhccCC--CCchhhHHHHHHHHHHHHcCCCCCCccchH-
Confidence 9999999999999999998664332 222345788999999987654 688999999999999999999998642211
Q ss_pred ccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003504 746 KEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGL 807 (815)
Q Consensus 746 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~ 807 (815)
.+........ ....+...+.++.+++.+||..+|++||++.++++.
T Consensus 208 ------~~~~~~~~~~----------~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 208 ------KVLFLIPKNN----------PPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred ------HHHHHHhcCC----------CCCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 1111111110 111123455678899999999999999999999873
No 293
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=1.2e-34 Score=311.89 Aligned_cols=249 Identities=24% Similarity=0.302 Sum_probs=198.3
Q ss_pred CCCCCCeecccCCeeeEEEEcC-CCcEEEEEEeecCCcc---cHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEE
Q 003504 509 NFDRGTLLAEGKFGPVYRGFLP-GGIHVAVKVLVHGSTL---TDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYD 584 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 584 (815)
+|+..+.||+|+||.||+|... ++..||+|.+...... ..+.+.+|+++++.++||||+++++++......++|||
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 81 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMD 81 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEE
Confidence 6788899999999999999965 5899999999764332 34568899999999999999999999999999999999
Q ss_pred eCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCC
Q 003504 585 YMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIK 664 (815)
Q Consensus 585 y~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk 664 (815)
|+.+++|.+++... ....+++.....++.|++.||+||| +.+++|||||
T Consensus 82 ~~~~~~L~~~~~~~----------------------------~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlk 130 (316)
T cd05574 82 YCPGGELFRLLQRQ----------------------------PGKCLSEEVARFYAAEVLLALEYLH---LLGIVYRDLK 130 (316)
T ss_pred ecCCCCHHHHHHhC----------------------------CCCccCHHHHHHHHHHHHHHHHHHH---HCCeeccCCC
Confidence 99999999998642 1345788888999999999999999 8999999999
Q ss_pred CCceEEcCCCCeeecccccceecCCCC------------------------------ccccccccccccCCcccCCCCCC
Q 003504 665 ASSVYLDMNLEPRLSDFGLAKIFGNGL------------------------------DEEIARGSPGYIPPEFAQPDSDF 714 (815)
Q Consensus 665 ~~NIll~~~~~~kl~Dfgla~~~~~~~------------------------------~~~~~~gt~~y~aPE~~~~~~~~ 714 (815)
|+||+++.++.++|+|||++....... ......|+..|+|||++.+..
T Consensus 131 p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-- 208 (316)
T cd05574 131 PENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDG-- 208 (316)
T ss_pred hHHeEEcCCCCEEEeecchhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCC--
Confidence 999999999999999999987543211 011235788999999987665
Q ss_pred CCCcCcchhHHHHHHHHHhCCCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccC
Q 003504 715 PTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADL 794 (815)
Q Consensus 715 ~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~d 794 (815)
++.++||||||+++|||++|+.||......+. ....... ..........+.++.+++.+||..|
T Consensus 209 ~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~-------~~~~~~~---------~~~~~~~~~~~~~~~~li~~~l~~~ 272 (316)
T cd05574 209 HGSAVDWWTLGILLYEMLYGTTPFKGSNRDET-------FSNILKK---------EVTFPGSPPVSSSARDLIRKLLVKD 272 (316)
T ss_pred CCchHHHHHHHHHHHHHhhCCCCCCCCchHHH-------HHHHhcC---------CccCCCccccCHHHHHHHHHHccCC
Confidence 68899999999999999999999975332111 1111111 1111111225678999999999999
Q ss_pred CCCCCC----HHHHHH
Q 003504 795 PLKRPS----MQQIVG 806 (815)
Q Consensus 795 P~~RPs----~~~v~~ 806 (815)
|++||+ +++++.
T Consensus 273 p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 273 PSKRLGSKRGAAEIKQ 288 (316)
T ss_pred HhHCCCchhhHHHHHc
Confidence 999999 666654
No 294
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=1.7e-34 Score=305.67 Aligned_cols=246 Identities=22% Similarity=0.366 Sum_probs=198.2
Q ss_pred CCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeCCC
Q 003504 510 FDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMEN 588 (815)
Q Consensus 510 ~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 588 (815)
|...+.||+|++|.||+|.. .++..||+|.+........+.+.+|+.+++.++||||+++++++...+..++|+||+++
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~ 100 (285)
T cd06648 21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEG 100 (285)
T ss_pred hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCC
Confidence 44467999999999999984 57889999998654444556788999999999999999999999999999999999999
Q ss_pred CChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCce
Q 003504 589 GNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSV 668 (815)
Q Consensus 589 gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NI 668 (815)
++|.+++.. ..+++..+..++.|++.||+||| +.+++||||+|+||
T Consensus 101 ~~L~~~~~~-------------------------------~~~~~~~~~~~~~ql~~~l~~lH---~~~i~H~dl~p~Ni 146 (285)
T cd06648 101 GALTDIVTH-------------------------------TRMNEEQIATVCLAVLKALSFLH---AQGVIHRDIKSDSI 146 (285)
T ss_pred CCHHHHHHh-------------------------------CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChhhE
Confidence 999999864 23677888999999999999999 88999999999999
Q ss_pred EEcCCCCeeecccccceecCCCC-ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCcccc
Q 003504 669 YLDMNLEPRLSDFGLAKIFGNGL-DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKE 747 (815)
Q Consensus 669 ll~~~~~~kl~Dfgla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~ 747 (815)
+++.++.++|+|||.+....... ......|+..|+|||...+.. ++.++|||||||++||+++|+.||....+
T Consensus 147 l~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~Dv~slGv~l~ell~g~~p~~~~~~---- 220 (285)
T cd06648 147 LLTSDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPEVISRLP--YGTEVDIWSLGIMVIEMVDGEPPYFNEPP---- 220 (285)
T ss_pred EEcCCCcEEEcccccchhhccCCcccccccCCccccCHHHhcCCC--CCCcccHHHHHHHHHHHHhCCCCCcCCCH----
Confidence 99999999999999887654322 122345889999999987655 68899999999999999999999875322
Q ss_pred ccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 748 GNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 748 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
.......... . .+... .+...+..+.+++.+||..+|++||+++++++
T Consensus 221 ---~~~~~~~~~~-~-----~~~~~--~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 221 ---LQAMKRIRDN-L-----PPKLK--NLHKVSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred ---HHHHHHHHhc-C-----CCCCc--ccccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 1112211111 1 01111 12224567999999999999999999999985
No 295
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=4.4e-34 Score=298.97 Aligned_cols=251 Identities=27% Similarity=0.375 Sum_probs=204.6
Q ss_pred cCCCCCCeecccCCeeeEEEEcC-CCcEEEEEEeecCCc-ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEe
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFLP-GGIHVAVKVLVHGST-LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDY 585 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 585 (815)
++|++.+.||+|++|.||+|+.. ++..||||++..... ...+.+.+|+..+.+++||||+++++++......++|+||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY 80 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence 36788899999999999999965 589999999876433 3457899999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCC-CCeeeccCC
Q 003504 586 MENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCS-PPIIHRDIK 664 (815)
Q Consensus 586 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~-~~ivHrDlk 664 (815)
+++++|.+++.. ...++...+..++.|+++|++||| + .+++||||+
T Consensus 81 ~~~~~L~~~l~~------------------------------~~~l~~~~~~~~~~~l~~~l~~lh---~~~~~~H~~l~ 127 (264)
T cd06623 81 MDGGSLADLLKK------------------------------VGKIPEPVLAYIARQILKGLDYLH---TKRHIIHRDIK 127 (264)
T ss_pred cCCCcHHHHHHH------------------------------cCCCCHHHHHHHHHHHHHHHHHHh---ccCCCccCCCC
Confidence 999999999964 135778889999999999999999 7 999999999
Q ss_pred CCceEEcCCCCeeecccccceecCCCCcc-ccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCC
Q 003504 665 ASSVYLDMNLEPRLSDFGLAKIFGNGLDE-EIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYP 743 (815)
Q Consensus 665 ~~NIll~~~~~~kl~Dfgla~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~ 743 (815)
|+||+++.++.++|+|||.+......... ....++..|+|||.+.... ++.++||||||+++||+++|+.||.....
T Consensus 128 ~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~--~~~~~Dv~slG~il~~l~tg~~p~~~~~~ 205 (264)
T cd06623 128 PSNLLINSKGEVKIADFGISKVLENTLDQCNTFVGTVTYMSPERIQGES--YSYAADIWSLGLTLLECALGKFPFLPPGQ 205 (264)
T ss_pred HHHEEECCCCCEEEccCccceecccCCCcccceeecccccCHhhhCCCC--CCchhhHHHHHHHHHHHHhCCCCCccccc
Confidence 99999999999999999999876543322 2445788999999987664 78899999999999999999999976432
Q ss_pred ccccccHHHHHHHHHhcCCCCccccccccCCCCHH-HHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003504 744 EEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEK-QMEEALKIGYLCTADLPLKRPSMQQIVGL 807 (815)
Q Consensus 744 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~ 807 (815)
. ............. .+. .+.. .+..+.+++.+||..+|++||++.++++.
T Consensus 206 ~----~~~~~~~~~~~~~------~~~----~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 206 P----SFFELMQAICDGP------PPS----LPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred c----CHHHHHHHHhcCC------CCC----CCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 1 1111111111110 111 1222 56789999999999999999999999863
No 296
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.8e-36 Score=311.32 Aligned_cols=246 Identities=25% Similarity=0.362 Sum_probs=200.3
Q ss_pred CCCCCeecccCCeeeEEEE-cCCCcEEEEEEeecCCc---ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEe
Q 003504 510 FDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHGST---LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDY 585 (815)
Q Consensus 510 ~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 585 (815)
|...+.||.|+||.||-|+ ..+...||||.+.-... ...+++.+|+..|++++|||++.+-|||......|+||||
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEY 107 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEY 107 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHH
Confidence 4445789999999999999 45678899999875433 3346889999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCC
Q 003504 586 MENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKA 665 (815)
Q Consensus 586 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~ 665 (815)
|-| |-.+++.-. .+++.......|+.|++.||+||| +.+.||||||+
T Consensus 108 ClG-SAsDlleVh-----------------------------kKplqEvEIAAi~~gaL~gLaYLH---S~~~IHRDiKA 154 (948)
T KOG0577|consen 108 CLG-SASDLLEVH-----------------------------KKPLQEVEIAAITHGALQGLAYLH---SHNRIHRDIKA 154 (948)
T ss_pred Hhc-cHHHHHHHH-----------------------------hccchHHHHHHHHHHHHHHHHHHH---HhhHHhhhccc
Confidence 976 777777543 345667778899999999999999 89999999999
Q ss_pred CceEEcCCCCeeecccccceecCCCCccccccccccccCCcccCC-CCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCc
Q 003504 666 SSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQP-DSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPE 744 (815)
Q Consensus 666 ~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~ 744 (815)
-|||+++.|.+|++|||.|..+.+ ...++|||.|||||++.. ..+.|+-|+||||+|++..||..+++|+...+.
T Consensus 155 GNILLse~g~VKLaDFGSAsi~~P---AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNA- 230 (948)
T KOG0577|consen 155 GNILLSEPGLVKLADFGSASIMAP---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA- 230 (948)
T ss_pred cceEecCCCeeeeccccchhhcCc---hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchH-
Confidence 999999999999999999987754 356779999999998654 345588899999999999999999999764221
Q ss_pred cccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003504 745 EKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGL 807 (815)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~ 807 (815)
.+-+..+..++ .|.+. ..+++..+..++..|+++-|.+|||.+++++.
T Consensus 231 ------MSALYHIAQNe------sPtLq---s~eWS~~F~~Fvd~CLqKipqeRptse~ll~H 278 (948)
T KOG0577|consen 231 ------MSALYHIAQNE------SPTLQ---SNEWSDYFRNFVDSCLQKIPQERPTSEELLKH 278 (948)
T ss_pred ------HHHHHHHHhcC------CCCCC---CchhHHHHHHHHHHHHhhCcccCCcHHHHhhc
Confidence 11111122221 23332 56788899999999999999999999998764
No 297
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=1.8e-34 Score=302.76 Aligned_cols=250 Identities=20% Similarity=0.326 Sum_probs=199.0
Q ss_pred CCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCc------ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEE
Q 003504 509 NFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGST------LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIA 581 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~------~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 581 (815)
+|+.++.||+|+||.||+|.. .++..||+|.+..... ...+.+.+|++++++++||||+++++++.+.+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 477889999999999999984 6788999999864321 123578899999999999999999999999999999
Q ss_pred EEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeec
Q 003504 582 IYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHR 661 (815)
Q Consensus 582 v~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHr 661 (815)
|+||+++++|.+++.. ...+++.....++.|++.||+||| +.+++||
T Consensus 81 v~e~~~~~~L~~~l~~------------------------------~~~~~~~~~~~~~~ql~~al~~LH---~~~i~H~ 127 (268)
T cd06630 81 FVEWMAGGSVSHLLSK------------------------------YGAFKEAVIINYTEQLLRGLSYLH---ENQIIHR 127 (268)
T ss_pred EEeccCCCcHHHHHHH------------------------------hCCCCHHHHHHHHHHHHHHHHHHH---hCCeecC
Confidence 9999999999999864 224678888999999999999999 8899999
Q ss_pred cCCCCceEEcCCC-CeeecccccceecCCCC-----ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCC
Q 003504 662 DIKASSVYLDMNL-EPRLSDFGLAKIFGNGL-----DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735 (815)
Q Consensus 662 Dlk~~NIll~~~~-~~kl~Dfgla~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~ 735 (815)
||+|+||+++.++ .+||+|||.+....... ......|+..|+|||.+.+.. ++.++||||+|+++||+++|+
T Consensus 128 ~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~--~~~~~Dv~slG~~l~~l~~g~ 205 (268)
T cd06630 128 DVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQ--YGRSCDVWSVGCVIIEMATAK 205 (268)
T ss_pred CCCHHHEEEcCCCCEEEEcccccccccccccccCCccccccccccceeCHhHhccCC--CCcccchHHHHHHHHHHHhCC
Confidence 9999999998776 59999999998765321 112345788999999987655 688999999999999999999
Q ss_pred CCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 736 KPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 736 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
.||....... ........... ......+.....++.+++.+|+..+|++||++.++++
T Consensus 206 ~p~~~~~~~~----~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 206 PPWNAEKHSN----HLALIFKIASA---------TTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred CCCCCCCCcc----hHHHHHHHhcc---------CCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 9996432211 11111111100 1112234556678999999999999999999999975
No 298
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=3.2e-35 Score=332.66 Aligned_cols=266 Identities=19% Similarity=0.218 Sum_probs=190.2
Q ss_pred HHHHHhcCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCcccHHHHHHHHHHhcCCC------CCCceeeeeEEE
Q 003504 502 DLLSATSNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGSTLTDQEAARELEYLGRIK------HPNLVPLTGYCI 574 (815)
Q Consensus 502 ~l~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~------H~niv~l~g~~~ 574 (815)
++...+++|.+.+.||+|+||.||+|.. .++..||||+++.. ......+..|+++++.++ |++++++++++.
T Consensus 123 ~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~ 201 (467)
T PTZ00284 123 DIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNV-PKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQ 201 (467)
T ss_pred ccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecc-hhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEE
Confidence 3344567899999999999999999985 46788999998642 222345566777766665 456889999887
Q ss_pred eC-CeeEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcC
Q 003504 575 AG-DQRIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHG 653 (815)
Q Consensus 575 ~~-~~~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~ 653 (815)
.. ...++|||++ +++|.+++.. ...+.+.....|+.|++.||+|||
T Consensus 202 ~~~~~~~iv~~~~-g~~l~~~l~~------------------------------~~~l~~~~~~~i~~qi~~aL~yLH-- 248 (467)
T PTZ00284 202 NETGHMCIVMPKY-GPCLLDWIMK------------------------------HGPFSHRHLAQIIFQTGVALDYFH-- 248 (467)
T ss_pred cCCceEEEEEecc-CCCHHHHHHH------------------------------cCCCCHHHHHHHHHHHHHHHHHHH--
Confidence 64 4678899987 6689888864 235788889999999999999999
Q ss_pred CC-CCeeeccCCCCceEEcCCC----------------CeeecccccceecCCCCccccccccccccCCcccCCCCCCCC
Q 003504 654 CS-PPIIHRDIKASSVYLDMNL----------------EPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPT 716 (815)
Q Consensus 654 ~~-~~ivHrDlk~~NIll~~~~----------------~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~ 716 (815)
. .+||||||||+|||++.++ .+||+|||.+..... ......||+.|+|||++.+.. ++
T Consensus 249 -~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~--~~~~~~gt~~Y~APE~~~~~~--~~ 323 (467)
T PTZ00284 249 -TELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDERH--SRTAIVSTRHYRSPEVVLGLG--WM 323 (467)
T ss_pred -hcCCeecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCccccCcc--ccccccCCccccCcHHhhcCC--CC
Confidence 5 5999999999999998765 499999998864322 233457999999999998766 78
Q ss_pred CcCcchhHHHHHHHHHhCCCCCCCCCCccccccHHH--------HHHH--------HHhcCC-CCccccccc-----cCC
Q 003504 717 PKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVS--------WVRG--------LVRNNK-GSRAIDPKI-----RDT 774 (815)
Q Consensus 717 ~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~--------~~~~--------~~~~~~-~~~~~~~~~-----~~~ 774 (815)
.++|||||||++|||++|+.||......+....+.. |... +..... .....++.. ...
T Consensus 324 ~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (467)
T PTZ00284 324 YSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARAR 403 (467)
T ss_pred cHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhccc
Confidence 899999999999999999999976432211111110 1100 000000 000000000 000
Q ss_pred C--CHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 775 G--PEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 775 ~--~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
. .......+.+|+.+||..||++|||++|+++
T Consensus 404 ~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~ 437 (467)
T PTZ00284 404 PVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTT 437 (467)
T ss_pred chhhhhchHHHHHHHHHhCCcChhhCCCHHHHhc
Confidence 0 0012356789999999999999999999986
No 299
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=1.2e-34 Score=307.66 Aligned_cols=243 Identities=24% Similarity=0.289 Sum_probs=197.1
Q ss_pred cCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCc---ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEE
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGST---LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIY 583 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 583 (815)
++|++.+.||+|+||.||+|.. .+++.||+|.+..... ...+.+.+|++++++++||||+++++++.++...++||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 3678889999999999999995 4689999999865322 23456889999999999999999999999999999999
Q ss_pred EeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccC
Q 003504 584 DYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDI 663 (815)
Q Consensus 584 ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDl 663 (815)
||+++|+|.++++. ...++...+..++.|++.||+||| +.+++||||
T Consensus 81 e~~~~~~L~~~~~~------------------------------~~~l~~~~~~~~~~qil~~l~~lH---~~~i~H~dl 127 (290)
T cd05580 81 EYVPGGELFSHLRK------------------------------SGRFPEPVARFYAAQVVLALEYLH---SLDIVYRDL 127 (290)
T ss_pred ecCCCCCHHHHHHH------------------------------cCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCC
Confidence 99999999999965 235678888999999999999999 799999999
Q ss_pred CCCceEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCC
Q 003504 664 KASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYP 743 (815)
Q Consensus 664 k~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~ 743 (815)
+|+||+++.++.+||+|||+++..... .....|++.|+|||.+.... .+.++||||||+++|||++|+.||.....
T Consensus 128 ~p~nili~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~y~aPE~~~~~~--~~~~~Di~slG~il~~l~~g~~p~~~~~~ 203 (290)
T cd05580 128 KPENLLLDSDGYIKITDFGFAKRVKGR--TYTLCGTPEYLAPEIILSKG--YGKAVDWWALGILIYEMLAGYPPFFDDNP 203 (290)
T ss_pred CHHHEEECCCCCEEEeeCCCccccCCC--CCCCCCCccccChhhhcCCC--CCccccHHHHHHHHHHHHhCCCCCCCCCH
Confidence 999999999999999999999876543 33446899999999887654 68899999999999999999999975331
Q ss_pred ccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCC-----CHHHHH
Q 003504 744 EEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRP-----SMQQIV 805 (815)
Q Consensus 744 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----s~~~v~ 805 (815)
. ....... ... . ..+...+..+.+++.+||..+|.+|| ++++++
T Consensus 204 ~-------~~~~~~~-~~~------~----~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~ 252 (290)
T cd05580 204 I-------QIYEKIL-EGK------V----RFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIK 252 (290)
T ss_pred H-------HHHHHHh-cCC------c----cCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHH
Confidence 1 1111111 110 0 11223356788999999999999999 666665
No 300
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=2.6e-34 Score=304.57 Aligned_cols=251 Identities=24% Similarity=0.365 Sum_probs=203.2
Q ss_pred HhcCCCCCCeecccCCeeeEEEEcC-CCcEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEE
Q 003504 506 ATSNFDRGTLLAEGKFGPVYRGFLP-GGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYD 584 (815)
Q Consensus 506 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 584 (815)
.+..|+..+.||+|+||.||+|... ++..||+|++..... ..+.+.+|++++++++|+|++++++++......++|+|
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 95 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVME 95 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEe
Confidence 4556788899999999999999975 688999999976433 46678899999999999999999999999999999999
Q ss_pred eCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCC
Q 003504 585 YMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIK 664 (815)
Q Consensus 585 y~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk 664 (815)
|+++++|.+++... ...+++..+..++.|++.||+||| +.+++|+||+
T Consensus 96 ~~~~~~L~~~l~~~-----------------------------~~~l~~~~~~~i~~~i~~~L~~lH---~~gi~H~dl~ 143 (286)
T cd06614 96 YMDGGSLTDIITQN-----------------------------FVRMNEPQIAYVCREVLQGLEYLH---SQNVIHRDIK 143 (286)
T ss_pred ccCCCcHHHHHHHh-----------------------------ccCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCC
Confidence 99999999999752 135788999999999999999999 8999999999
Q ss_pred CCceEEcCCCCeeecccccceecCCCC-ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCC
Q 003504 665 ASSVYLDMNLEPRLSDFGLAKIFGNGL-DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYP 743 (815)
Q Consensus 665 ~~NIll~~~~~~kl~Dfgla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~ 743 (815)
|+||+++.++.++|+|||++....... ......++..|+|||++.+.. ++.++|||||||++||+++|+.||....+
T Consensus 144 p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~--~~~~~Dv~slGvil~~l~~g~~p~~~~~~ 221 (286)
T cd06614 144 SDNILLSKDGSVKLADFGFAAQLTKEKSKRNSVVGTPYWMAPEVIKRKD--YGPKVDIWSLGIMCIEMAEGEPPYLREPP 221 (286)
T ss_pred hhhEEEcCCCCEEECccchhhhhccchhhhccccCCcccCCHhHhcCCC--CCCccccHHHHHHHHHHHhCCCCCCCCCH
Confidence 999999999999999999887654322 222334788999999987655 68899999999999999999999874322
Q ss_pred ccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 744 EEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 744 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
. .......... .. . ...+...+..+.+++.+||+.+|.+||++.++++
T Consensus 222 ~-------~~~~~~~~~~-~~-----~--~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 269 (286)
T cd06614 222 L-------RALFLITTKG-IP-----P--LKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQ 269 (286)
T ss_pred H-------HHHHHHHhcC-CC-----C--CcchhhCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 1 1111111110 00 0 1112235678899999999999999999999985
No 301
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=1.1e-34 Score=307.69 Aligned_cols=259 Identities=23% Similarity=0.335 Sum_probs=196.7
Q ss_pred CCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCC-cccHHHHHHHHHHhcCCC-CCCceeeeeEEEeCCeeEEEEEe
Q 003504 509 NFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGS-TLTDQEAARELEYLGRIK-HPNLVPLTGYCIAGDQRIAIYDY 585 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lv~ey 585 (815)
+|+..+.||+|+||.||++.. .+++.||+|.+.... ......+.+|+.++.++. ||||+++++++......+++|||
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~ 84 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL 84 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence 455567899999999999995 468899999986532 234457889999999996 99999999999998899999999
Q ss_pred CCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCC
Q 003504 586 MENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKA 665 (815)
Q Consensus 586 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~ 665 (815)
+.. ++.++..... ......+++....+++.+++.||+|||+ ..+++||||||
T Consensus 85 ~~~-~l~~l~~~~~-------------------------~~~~~~l~~~~~~~i~~~i~~~l~~lh~--~~~i~H~dlkp 136 (288)
T cd06616 85 MDI-SLDKFYKYVY-------------------------EVLKSVIPEEILGKIAVATVKALNYLKE--ELKIIHRDVKP 136 (288)
T ss_pred ccC-CHHHHHHHHH-------------------------HhhcCCCCHHHHHHHHHHHHHHHHHHhh--cCCeeccCCCH
Confidence 875 5555432100 0112457888899999999999999994 35899999999
Q ss_pred CceEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCCc
Q 003504 666 SSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDS-DFPTPKSDVYCYGVVLLELITGKKPLGDDYPE 744 (815)
Q Consensus 666 ~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~ 744 (815)
+||+++.++.+||+|||+++............|+..|+|||.+.+.. ..++.++|||||||++||+++|+.||....
T Consensus 137 ~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-- 214 (288)
T cd06616 137 SNILLDRNGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN-- 214 (288)
T ss_pred HHEEEccCCcEEEeecchhHHhccCCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc--
Confidence 99999999999999999998665443334446889999999987652 236889999999999999999999986421
Q ss_pred cccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003504 745 EKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGL 807 (815)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~ 807 (815)
.....+...... ..+.+....+...+.++.+++.+||+.+|++||++++|++.
T Consensus 215 ----~~~~~~~~~~~~------~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 215 ----SVFDQLTQVVKG------DPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred ----hHHHHHhhhcCC------CCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 111111111111 11222222234467789999999999999999999999763
No 302
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=4.3e-34 Score=303.74 Aligned_cols=265 Identities=21% Similarity=0.240 Sum_probs=194.9
Q ss_pred HhcCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCc-ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEE
Q 003504 506 ATSNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGST-LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIY 583 (815)
Q Consensus 506 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 583 (815)
++.+|...+.||+|+||.||+|.. .++..||+|++..... .....+.+|+.++++++|+||+++++++...+..++|+
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF 82 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence 456888999999999999999985 5688999999865432 22346788999999999999999999999999999999
Q ss_pred EeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccC
Q 003504 584 DYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDI 663 (815)
Q Consensus 584 ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDl 663 (815)
||+. +++.+++... ...+.+.....++.|++.||+||| ..+|+||||
T Consensus 83 e~~~-~~l~~~~~~~-----------------------------~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dl 129 (291)
T cd07870 83 EYMH-TDLAQYMIQH-----------------------------PGGLHPYNVRLFMFQLLRGLAYIH---GQHILHRDL 129 (291)
T ss_pred eccc-CCHHHHHHhC-----------------------------CCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCC
Confidence 9996 6887777532 223567778889999999999999 789999999
Q ss_pred CCCceEEcCCCCeeecccccceecCCCC-ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCC
Q 003504 664 KASSVYLDMNLEPRLSDFGLAKIFGNGL-DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDY 742 (815)
Q Consensus 664 k~~NIll~~~~~~kl~Dfgla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~ 742 (815)
||+||+++.++.+||+|||+++...... ......++..|+|||++.+... ++.++|||||||++|||++|+.||....
T Consensus 130 kp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~~Dv~slG~~l~~l~~g~~~f~~~~ 208 (291)
T cd07870 130 KPQNLLISYLGELKLADFGLARAKSIPSQTYSSEVVTLWYRPPDVLLGATD-YSSALDIWGAGCIFIEMLQGQPAFPGVS 208 (291)
T ss_pred ChHHEEEcCCCcEEEeccccccccCCCCCCCCCccccccccCCceeecCCC-CCcHHHHHHHHHHHHHHHhCCCCCCCch
Confidence 9999999999999999999997653322 2233457889999998865432 5778999999999999999999997532
Q ss_pred CccccccHHHHHH-----------HHHhcCCC-CccccccccCC-----CCHHHHHHHHHHHhhccccCCCCCCCHHHHH
Q 003504 743 PEEKEGNLVSWVR-----------GLVRNNKG-SRAIDPKIRDT-----GPEKQMEEALKIGYLCTADLPLKRPSMQQIV 805 (815)
Q Consensus 743 ~~~~~~~~~~~~~-----------~~~~~~~~-~~~~~~~~~~~-----~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~ 805 (815)
.. ...+..... ........ ........... .....+.++.+++.+|+..||++|||++|++
T Consensus 209 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l 286 (291)
T cd07870 209 DV--FEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDAL 286 (291)
T ss_pred hH--HHHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHh
Confidence 21 011111000 00000000 00000000000 0001245788999999999999999999987
Q ss_pred H
Q 003504 806 G 806 (815)
Q Consensus 806 ~ 806 (815)
.
T Consensus 287 ~ 287 (291)
T cd07870 287 L 287 (291)
T ss_pred c
Confidence 4
No 303
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=8e-34 Score=300.97 Aligned_cols=260 Identities=25% Similarity=0.311 Sum_probs=198.9
Q ss_pred CCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCc-ccHHHHHHHHHHhcCCCCCCceeeeeEEEeC--CeeEEEEE
Q 003504 509 NFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGST-LTDQEAARELEYLGRIKHPNLVPLTGYCIAG--DQRIAIYD 584 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lv~e 584 (815)
+|+..+.||.|++|.||+|.. .+++.+|+|.+..... .....+.+|++++++++||||+++++++.+. ...++|||
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 81 (287)
T cd06621 2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAME 81 (287)
T ss_pred ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEE
Confidence 577788999999999999996 4688999999875322 3456789999999999999999999998654 36789999
Q ss_pred eCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCC
Q 003504 585 YMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIK 664 (815)
Q Consensus 585 y~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk 664 (815)
|+++|+|.+++.... .....++......++.|++.||+||| +.+++||||+
T Consensus 82 ~~~~~~L~~~l~~~~--------------------------~~~~~l~~~~~~~i~~~i~~~L~~lH---~~~i~H~dl~ 132 (287)
T cd06621 82 YCEGGSLDSIYKKVK--------------------------KRGGRIGEKVLGKIAESVLKGLSYLH---SRKIIHRDIK 132 (287)
T ss_pred ecCCCCHHHHHHHHH--------------------------hcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCC
Confidence 999999999876421 11334677888999999999999999 8999999999
Q ss_pred CCceEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCc
Q 003504 665 ASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPE 744 (815)
Q Consensus 665 ~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~ 744 (815)
|+||+++.++.++|+|||++........ ....++..|+|||.+.+.. ++.++||||||+++|||++|+.||.....+
T Consensus 133 ~~nil~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~y~~pE~~~~~~--~~~~~Dv~slG~il~~l~~g~~p~~~~~~~ 209 (287)
T cd06621 133 PSNILLTRKGQVKLCDFGVSGELVNSLA-GTFTGTSFYMAPERIQGKP--YSITSDVWSLGLTLLEVAQNRFPFPPEGEP 209 (287)
T ss_pred HHHEEEecCCeEEEeecccccccccccc-ccccCCccccCHHHhcCCC--CCchhhHHHHHHHHHHHHhCCCCCCcccCC
Confidence 9999999999999999999876543222 2345788999999887665 688999999999999999999999864321
Q ss_pred cccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 745 EKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
. ....+........ ... .+.... ......+.++.+++.+||+.+|++||++.|+++
T Consensus 210 ~--~~~~~~~~~~~~~-~~~-~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 210 P--LGPIELLSYIVNM-PNP-ELKDEP--GNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred C--CChHHHHHHHhcC-Cch-hhccCC--CCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 1 1111111111111 100 011110 001234678899999999999999999999987
No 304
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=1.8e-34 Score=305.46 Aligned_cols=266 Identities=20% Similarity=0.260 Sum_probs=199.7
Q ss_pred CCCCCCeecccCCeeeEEEEcC-CCcEEEEEEeecCCc-ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeC
Q 003504 509 NFDRGTLLAEGKFGPVYRGFLP-GGIHVAVKVLVHGST-LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYM 586 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 586 (815)
+|+..+.||.|++|.||+|+.. +|..||||.+..... .....+.+|+.++++++||||+++++++.+.+..++||||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 4778899999999999999964 688999999875432 23456778999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCC
Q 003504 587 ENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKAS 666 (815)
Q Consensus 587 ~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~ 666 (815)
++ +|.+++.... ....+++..+..++.|++.||+||| +.+++||||||+
T Consensus 81 ~~-~l~~~~~~~~---------------------------~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~h~dl~p~ 129 (284)
T cd07836 81 DK-DLKKYMDTHG---------------------------VRGALDPNTVKSFTYQLLKGIAFCH---ENRVLHRDLKPQ 129 (284)
T ss_pred Cc-cHHHHHHhcC---------------------------CCCCcCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHH
Confidence 85 8988886421 1235789999999999999999999 789999999999
Q ss_pred ceEEcCCCCeeecccccceecCCCC-ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCcc
Q 003504 667 SVYLDMNLEPRLSDFGLAKIFGNGL-DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEE 745 (815)
Q Consensus 667 NIll~~~~~~kl~Dfgla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~ 745 (815)
||++++++.+||+|||++....... ......++..|+|||.+.+... ++.++|||||||++||+++|+.||......+
T Consensus 130 ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~-~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~ 208 (284)
T cd07836 130 NLLINKRGELKLADFGLARAFGIPVNTFSNEVVTLWYRAPDVLLGSRT-YSTSIDIWSVGCIMAEMITGRPLFPGTNNED 208 (284)
T ss_pred HEEECCCCcEEEeecchhhhhcCCccccccccccccccChHHhcCCCC-CCcHHHHHHHHHHHHHHHhCCCCCCCCCcHH
Confidence 9999999999999999997654322 1223457889999998765432 5789999999999999999999998654332
Q ss_pred ccccHHHHH--------HHHHhcCCCCcccccc---ccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 746 KEGNLVSWV--------RGLVRNNKGSRAIDPK---IRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 746 ~~~~~~~~~--------~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
....+.... ................ .........+.++.+++.+|++.||.+||+++++++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 209 QLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred HHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 221111110 0000000000000000 000001234567889999999999999999999875
No 305
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=1.8e-34 Score=305.30 Aligned_cols=260 Identities=20% Similarity=0.275 Sum_probs=196.4
Q ss_pred CCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCC--cccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeC
Q 003504 510 FDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGS--TLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYM 586 (815)
Q Consensus 510 ~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 586 (815)
|+..+.||.|++|.||+|.. .+|..||+|++.... ......+.+|++++++++|||++++++++.+.+..++||||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 56678999999999999985 579999999986543 223456889999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCC
Q 003504 587 ENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKAS 666 (815)
Q Consensus 587 ~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~ 666 (815)
+ ++|.+++... ....+++..+.+++.|+++||+||| +.+++||||+|+
T Consensus 81 ~-~~l~~~~~~~----------------------------~~~~~~~~~~~~~~~~i~~~L~~lH---~~~~~H~dl~p~ 128 (283)
T cd07835 81 D-LDLKKYMDSS----------------------------PLTGLDPPLIKSYLYQLLQGIAYCH---SHRVLHRDLKPQ 128 (283)
T ss_pred C-cCHHHHHhhC----------------------------CCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHH
Confidence 5 6999998652 1235789999999999999999999 789999999999
Q ss_pred ceEEcCCCCeeecccccceecCCCC-ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCcc
Q 003504 667 SVYLDMNLEPRLSDFGLAKIFGNGL-DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEE 745 (815)
Q Consensus 667 NIll~~~~~~kl~Dfgla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~ 745 (815)
||+++.++.++|+|||+++...... ......++..|+|||++.+... ++.++|||||||++|||++|+.||.......
T Consensus 129 nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~-~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~ 207 (283)
T cd07835 129 NLLIDREGALKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGSRQ-YSTPVDIWSIGCIFAEMVNRRPLFPGDSEID 207 (283)
T ss_pred HEEEcCCCcEEEeecccccccCCCccccCccccccCCCCCceeecCcc-cCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 9999999999999999997654322 2223346889999998765432 5789999999999999999999997532211
Q ss_pred ccccHHHHHHHHHhcC-----------C----CCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 746 KEGNLVSWVRGLVRNN-----------K----GSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 746 ~~~~~~~~~~~~~~~~-----------~----~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
.+...++...... . ......+.. .......+.++.+++.+|++.+|++||+++++++
T Consensus 208 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 208 ---QLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDL-SKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred ---HHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccch-hhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 1111111000000 0 000000000 0112233467889999999999999999999975
No 306
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=1.4e-34 Score=301.76 Aligned_cols=247 Identities=22% Similarity=0.247 Sum_probs=201.2
Q ss_pred CCCCCCeecccCCeeeEEEEcC-CCcEEEEEEeecCCc---ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEE
Q 003504 509 NFDRGTLLAEGKFGPVYRGFLP-GGIHVAVKVLVHGST---LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYD 584 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 584 (815)
+|++.+.||.|+||.||+|... ++..||+|.+..... ...+.+.+|++++++++||||+++++++.+....++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 4777899999999999999964 688999999975432 234678899999999999999999999999999999999
Q ss_pred eCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCC
Q 003504 585 YMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIK 664 (815)
Q Consensus 585 y~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk 664 (815)
|+++++|.+++.. ...+++.....++.|+++||.||| ..+++|+||+
T Consensus 81 ~~~~~~L~~~l~~------------------------------~~~l~~~~~~~~~~~i~~~l~~lh---~~~i~h~dl~ 127 (258)
T cd05578 81 LLLGGDLRYHLSQ------------------------------KVKFSEEQVKFWICEIVLALEYLH---SKGIIHRDIK 127 (258)
T ss_pred CCCCCCHHHHHHh------------------------------cCCcCHHHHHHHHHHHHHHHHHHH---hCCeeccCCC
Confidence 9999999999864 135677888999999999999999 7899999999
Q ss_pred CCceEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCc
Q 003504 665 ASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPE 744 (815)
Q Consensus 665 ~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~ 744 (815)
|+||++++++.++|+|||++.............|+..|+|||.+.... ++.++||||||+++|++++|+.||......
T Consensus 128 ~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~--~~~~~Di~slG~~l~~l~~g~~p~~~~~~~ 205 (258)
T cd05578 128 PDNILLDEQGHVHITDFNIATKVTPDTLTTSTSGTPGYMAPEVLCRQG--YSVAVDWWSLGVTAYECLRGKRPYRGHSRT 205 (258)
T ss_pred HHHeEEcCCCCEEEeecccccccCCCccccccCCChhhcCHHHHcccC--CCCcccchhhHHHHHHHHhCCCCCCCCCcc
Confidence 999999999999999999998765544444556888999999987665 688999999999999999999999754321
Q ss_pred cccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCH--HHHH
Q 003504 745 EKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSM--QQIV 805 (815)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~--~~v~ 805 (815)
...+....... .....+...+..+.+++.+||..||.+||++ +|++
T Consensus 206 -----~~~~~~~~~~~----------~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 206 -----IRDQIRAKQET----------ADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred -----HHHHHHHHhcc----------ccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 11111111111 0111233455788999999999999999999 5554
No 307
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=6.5e-34 Score=306.01 Aligned_cols=247 Identities=26% Similarity=0.341 Sum_probs=195.2
Q ss_pred CCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCcc---cHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEe
Q 003504 510 FDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGSTL---TDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDY 585 (815)
Q Consensus 510 ~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~---~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 585 (815)
|+..+.||+|+||.||+|+. .++..||+|.+...... ....+.+|++++++++|||++++++++.+....++||||
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 106 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY 106 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence 55678999999999999995 56889999998653222 234688899999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCC
Q 003504 586 MENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKA 665 (815)
Q Consensus 586 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~ 665 (815)
++ |+|.+++... ...++|..+..++.|++.||.||| +.+++||||+|
T Consensus 107 ~~-g~l~~~~~~~-----------------------------~~~l~~~~~~~i~~~i~~~l~~lH---~~~i~H~dL~p 153 (317)
T cd06635 107 CL-GSASDLLEVH-----------------------------KKPLQEVEIAAITHGALQGLAYLH---SHNMIHRDIKA 153 (317)
T ss_pred CC-CCHHHHHHHh-----------------------------cCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCc
Confidence 97 4887777531 335789999999999999999999 88999999999
Q ss_pred CceEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCC-CCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCc
Q 003504 666 SSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPD-SDFPTPKSDVYCYGVVLLELITGKKPLGDDYPE 744 (815)
Q Consensus 666 ~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~ 744 (815)
+||+++.++.+||+|||++...... ....|+..|+|||++... ...++.++|||||||++|||++|+.||......
T Consensus 154 ~Nil~~~~~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~ 230 (317)
T cd06635 154 GNILLTEPGQVKLADFGSASIASPA---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM 230 (317)
T ss_pred ccEEECCCCCEEEecCCCccccCCc---ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHH
Confidence 9999999999999999998765432 234588899999987432 223688999999999999999999998652211
Q ss_pred cccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 003504 745 EKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLL 808 (815)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L 808 (815)
........... ........+..+.+++.+||+.+|++||++.++++..
T Consensus 231 -------~~~~~~~~~~~---------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~ 278 (317)
T cd06635 231 -------SALYHIAQNES---------PTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHM 278 (317)
T ss_pred -------HHHHHHHhccC---------CCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhCh
Confidence 11111111110 1111234556789999999999999999999998754
No 308
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=1.7e-34 Score=310.97 Aligned_cols=197 Identities=24% Similarity=0.316 Sum_probs=170.4
Q ss_pred CCCCCCeecccCCeeeEEEE-cCCCcEEEEEEeecCCcccHHHHHHHHHHhcCCC-C-----CCceeeeeEEEeCCeeEE
Q 003504 509 NFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIK-H-----PNLVPLTGYCIAGDQRIA 581 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-H-----~niv~l~g~~~~~~~~~l 581 (815)
+|++.+.||+|+||.|-||. ..+++.||||+++... .-..+-..|+.+|..++ | -|+|++++|+...+..++
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k-~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci 265 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK-RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI 265 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh-HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence 78889999999999999999 4669999999997643 23345567899999886 3 389999999999999999
Q ss_pred EEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeec
Q 003504 582 IYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHR 661 (815)
Q Consensus 582 v~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHr 661 (815)
|+|.+.. +|+++|+.++ -..++......|+.||+.||.+|| +.+|||+
T Consensus 266 VfELL~~-NLYellK~n~----------------------------f~Glsl~~ir~~~~Qil~~L~~L~---~l~IIHc 313 (586)
T KOG0667|consen 266 VFELLST-NLYELLKNNK----------------------------FRGLSLPLVRKFAQQILTALLFLH---ELGIIHC 313 (586)
T ss_pred eehhhhh-hHHHHHHhcC----------------------------CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeec
Confidence 9999977 9999998742 345888889999999999999999 8999999
Q ss_pred cCCCCceEEcCCC--CeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCC
Q 003504 662 DIKASSVYLDMNL--EPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLG 739 (815)
Q Consensus 662 Dlk~~NIll~~~~--~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~ 739 (815)
||||+|||+.+-. .+||+|||.|+...... ....-+..|+|||++.+.. |+.+.||||||||+.||++|.+-|.
T Consensus 314 DLKPENILL~~~~r~~vKVIDFGSSc~~~q~v--ytYiQSRfYRAPEVILGlp--Y~~~IDmWSLGCIlAEL~tG~PLfp 389 (586)
T KOG0667|consen 314 DLKPENILLKDPKRSRIKVIDFGSSCFESQRV--YTYIQSRFYRAPEVILGLP--YDTAIDMWSLGCILAELFTGEPLFP 389 (586)
T ss_pred cCChhheeeccCCcCceeEEecccccccCCcc--eeeeeccccccchhhccCC--CCCccceeehhhhHHhHhcCccccC
Confidence 9999999997543 69999999999876543 3566789999999999998 8999999999999999999988887
Q ss_pred CCC
Q 003504 740 DDY 742 (815)
Q Consensus 740 ~~~ 742 (815)
++.
T Consensus 390 G~n 392 (586)
T KOG0667|consen 390 GDN 392 (586)
T ss_pred CCC
Confidence 653
No 309
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=6.1e-34 Score=295.48 Aligned_cols=249 Identities=28% Similarity=0.434 Sum_probs=203.2
Q ss_pred CCCCCCeecccCCeeeEEEEcC-CCcEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeCC
Q 003504 509 NFDRGTLLAEGKFGPVYRGFLP-GGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYME 587 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 587 (815)
+|+..+.||+|++|.||+|... ++..|++|++..........+.+|++++++++|||++++++++......++++||++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 80 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS 80 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence 4777899999999999999964 688999999977544456789999999999999999999999999999999999999
Q ss_pred CCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCc
Q 003504 588 NGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASS 667 (815)
Q Consensus 588 ~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~N 667 (815)
+++|.+++... ...+++..+..++.+++.||+||| ..+++||||+|+|
T Consensus 81 ~~~L~~~~~~~-----------------------------~~~~~~~~~~~i~~~i~~~l~~lh---~~~i~h~dl~p~n 128 (253)
T cd05122 81 GGSLKDLLKST-----------------------------NQTLTESQIAYVCKELLKGLEYLH---SNGIIHRDIKAAN 128 (253)
T ss_pred CCcHHHHHhhc-----------------------------CCCCCHHHHHHHHHHHHHHHHHhh---cCCEecCCCCHHH
Confidence 99999998652 135788999999999999999999 7999999999999
Q ss_pred eEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCcccc
Q 003504 668 VYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKE 747 (815)
Q Consensus 668 Ill~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~ 747 (815)
|++++++.++|+|||.+.............|+..|+|||.+.... ++.++||||||+++|++++|+.||.....
T Consensus 129 i~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~--~~~~~Dv~slG~il~~l~~g~~p~~~~~~---- 202 (253)
T cd05122 129 ILLTSDGEVKLIDFGLSAQLSDTKARNTMVGTPYWMAPEVINGKP--YDYKADIWSLGITAIELAEGKPPYSELPP---- 202 (253)
T ss_pred EEEccCCeEEEeeccccccccccccccceecCCcccCHHHHcCCC--CCccccHHHHHHHHHHHHhCCCCCCCCch----
Confidence 999999999999999998776543234456889999999987665 68899999999999999999999875321
Q ss_pred ccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 748 GNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 748 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
......... .... ... .+...+..+.+++.+||..||++||++.++++
T Consensus 203 ---~~~~~~~~~-~~~~-----~~~--~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 203 ---MKALFKIAT-NGPP-----GLR--NPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred ---HHHHHHHHh-cCCC-----CcC--cccccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 111111111 1000 110 11123567899999999999999999999975
No 310
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=1.7e-34 Score=300.91 Aligned_cols=248 Identities=23% Similarity=0.389 Sum_probs=198.6
Q ss_pred CCCCCCeecccCCeeeEEEEcC-CCcEEEEEEeecCC--cccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEe
Q 003504 509 NFDRGTLLAEGKFGPVYRGFLP-GGIHVAVKVLVHGS--TLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDY 585 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 585 (815)
+|+..+.||+|+||.||+|... +|..||+|.+.... ....+.+.+|++++++++||||+++++++......++|+||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 4677899999999999999964 58889999986532 23445788999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCC
Q 003504 586 MENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKA 665 (815)
Q Consensus 586 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~ 665 (815)
+++++|.+++... ....+++..+..++.|++.||+||| +.+++||||||
T Consensus 81 ~~~~~L~~~~~~~----------------------------~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~H~dl~~ 129 (257)
T cd08225 81 CDGGDLMKRINRQ----------------------------RGVLFSEDQILSWFVQISLGLKHIH---DRKILHRDIKS 129 (257)
T ss_pred CCCCcHHHHHHhc----------------------------cCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCH
Confidence 9999999999652 1235789999999999999999999 78999999999
Q ss_pred CceEEcCCC-CeeecccccceecCCCCc-cccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCC
Q 003504 666 SSVYLDMNL-EPRLSDFGLAKIFGNGLD-EEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYP 743 (815)
Q Consensus 666 ~NIll~~~~-~~kl~Dfgla~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~ 743 (815)
+||++++++ .+||+|||.+........ .....|++.|+|||+..... ++.++|||||||++||+++|+.||....
T Consensus 130 ~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~--~~~~~Dv~slG~il~~l~~g~~p~~~~~- 206 (257)
T cd08225 130 QNIFLSKNGMVAKLGDFGIARQLNDSMELAYTCVGTPYYLSPEICQNRP--YNNKTDIWSLGCVLYELCTLKHPFEGNN- 206 (257)
T ss_pred HHEEEcCCCCeEEecccccchhccCCcccccccCCCccccCHHHHcCCC--CCchhhHHHHHHHHHHHHhCCCCCCCcc-
Confidence 999999886 469999999987654322 22335889999999887655 6889999999999999999999986422
Q ss_pred ccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 744 EEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 744 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
..++........ +.+ .+...+.++.+++.+||..+|++||++.++++
T Consensus 207 ------~~~~~~~~~~~~-----~~~-----~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 207 ------LHQLVLKICQGY-----FAP-----ISPNFSRDLRSLISQLFKVSPRDRPSITSILK 253 (257)
T ss_pred ------HHHHHHHHhccc-----CCC-----CCCCCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 222222222111 111 11233457899999999999999999999986
No 311
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=2.6e-34 Score=305.45 Aligned_cols=262 Identities=20% Similarity=0.266 Sum_probs=194.2
Q ss_pred cCCCCCCeecccCCeeeEEEEcC-CCcEEEEEEeecCCc-ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEe
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFLP-GGIHVAVKVLVHGST-LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDY 585 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 585 (815)
++|+..+.||+|++|.||+|... +++.||||.+..... .....+.+|++++++++||||+++++++.+.+..++||||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY 84 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence 57888999999999999999964 688999999865322 2234567899999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCC
Q 003504 586 MENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKA 665 (815)
Q Consensus 586 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~ 665 (815)
+++ +|.+++... ...+++.....++.|++.||.||| +.+|+||||||
T Consensus 85 ~~~-~L~~~~~~~-----------------------------~~~~~~~~~~~~~~ql~~al~~lH---~~~i~H~dl~p 131 (291)
T cd07844 85 LDT-DLKQYMDDC-----------------------------GGGLSMHNVRLFLFQLLRGLAYCH---QRRVLHRDLKP 131 (291)
T ss_pred CCC-CHHHHHHhC-----------------------------CCCCCHHHHHHHHHHHHHHHHHHH---hCCeecccCCH
Confidence 985 999988652 225678888999999999999999 88999999999
Q ss_pred CceEEcCCCCeeecccccceecCCCC-ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCc
Q 003504 666 SSVYLDMNLEPRLSDFGLAKIFGNGL-DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPE 744 (815)
Q Consensus 666 ~NIll~~~~~~kl~Dfgla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~ 744 (815)
+||+++.++.+||+|||+++...... ......++..|+|||++.+... ++.++|||||||++|||++|+.||......
T Consensus 132 ~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~-~~~~~Dv~slG~il~~l~~g~~~~~~~~~~ 210 (291)
T cd07844 132 QNLLISERGELKLADFGLARAKSVPSKTYSNEVVTLWYRPPDVLLGSTE-YSTSLDMWGVGCIFYEMATGRPLFPGSTDV 210 (291)
T ss_pred HHEEEcCCCCEEECccccccccCCCCccccccccccccCCcHHhhcCcc-cCcHHHHHHHHHHHHHHHhCCCCCCCCccH
Confidence 99999999999999999987543211 1222346888999998765432 578999999999999999999999753311
Q ss_pred cccccHHHHHHHHHhc---CCC--------------CccccccccCCC-CHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 745 EKEGNLVSWVRGLVRN---NKG--------------SRAIDPKIRDTG-PEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 745 ~~~~~~~~~~~~~~~~---~~~--------------~~~~~~~~~~~~-~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
. ..+. .....+.. +.. .......+.... ......++.+++.+|++.+|++||++.++++
T Consensus 211 ~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 211 E--DQLH-KIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred H--HHHH-HHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 0 0000 00000000 000 000000000000 0011256789999999999999999999875
No 312
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=2.4e-34 Score=304.93 Aligned_cols=263 Identities=24% Similarity=0.310 Sum_probs=197.5
Q ss_pred CCCCCeecccCCeeeEEEEcC-CCcEEEEEEeecCC--cccHHHHHHHHHHhcCCCCCCceeeeeEEEeC--CeeEEEEE
Q 003504 510 FDRGTLLAEGKFGPVYRGFLP-GGIHVAVKVLVHGS--TLTDQEAARELEYLGRIKHPNLVPLTGYCIAG--DQRIAIYD 584 (815)
Q Consensus 510 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lv~e 584 (815)
|++.+.||+|+||.||+|... ++..||+|.+.... ......+.+|++++++++|||++++++++... ...++|+|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 566789999999999999965 58899999997653 33345788999999999999999999999987 78999999
Q ss_pred eCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCC
Q 003504 585 YMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIK 664 (815)
Q Consensus 585 y~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk 664 (815)
|+++ +|.+++... ...+++..+..++.|+++||+||| ..+++|+||+
T Consensus 81 ~~~~-~l~~~~~~~-----------------------------~~~~~~~~~~~i~~~i~~al~~LH---~~~~~h~dl~ 127 (287)
T cd07840 81 YMDH-DLTGLLDSP-----------------------------EVKFTESQIKCYMKQLLEGLQYLH---SNGILHRDIK 127 (287)
T ss_pred cccc-cHHHHHhcc-----------------------------CCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCc
Confidence 9985 898888642 235788899999999999999999 7899999999
Q ss_pred CCceEEcCCCCeeecccccceecCCCC--ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCC
Q 003504 665 ASSVYLDMNLEPRLSDFGLAKIFGNGL--DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDY 742 (815)
Q Consensus 665 ~~NIll~~~~~~kl~Dfgla~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~ 742 (815)
|+||++++++.+||+|||++....... ......++..|+|||.+.+... ++.++||||||+++|||++|+.||....
T Consensus 128 p~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~-~~~~~Dv~slG~~l~el~t~~~p~~~~~ 206 (287)
T cd07840 128 GSNILINNDGVLKLADFGLARPYTKRNSADYTNRVITLWYRPPELLLGATR-YGPEVDMWSVGCILAELFLGKPIFQGST 206 (287)
T ss_pred HHHeEEcCCCCEEEccccceeeccCCCcccccccccccccCCceeeEcccc-CChHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 999999999999999999998765433 1233456888999998765432 6889999999999999999999997543
Q ss_pred CccccccHHHHHHHHHhcCC-------------CCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 743 PEEKEGNLVSWVRGLVRNNK-------------GSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 743 ~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
.......+.+.........+ ........+.......++.++.+++.+||..+|++||+++++++
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 207 ELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred hHHHHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 32111111111000000000 00000000000001112678899999999999999999999975
No 313
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-35 Score=312.03 Aligned_cols=249 Identities=23% Similarity=0.358 Sum_probs=203.4
Q ss_pred CCCCeecccCCeeeEEEEcCC-CcEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeCCCC
Q 003504 511 DRGTLLAEGKFGPVYRGFLPG-GIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENG 589 (815)
Q Consensus 511 ~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~g 589 (815)
.+.-.+|.|+||.||+|+.++ +.-.|.|++...+....++|.-||+||+..+||+||++++.|+..+..+++.|||.||
T Consensus 35 eIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~GG 114 (1187)
T KOG0579|consen 35 EIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGGG 114 (1187)
T ss_pred HHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCCc
Confidence 344679999999999999664 4445678886666666778999999999999999999999999889999999999999
Q ss_pred ChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCceE
Q 003504 590 NLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVY 669 (815)
Q Consensus 590 sL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NIl 669 (815)
-....+-.. +.++...+..-++.+++.||.||| +..|||||||+-|||
T Consensus 115 AVDaimlEL-----------------------------~r~LtE~QIqvvc~q~ldALn~LH---s~~iIHRDLKAGNiL 162 (1187)
T KOG0579|consen 115 AVDAIMLEL-----------------------------GRVLTEDQIQVVCYQVLDALNWLH---SQNIIHRDLKAGNIL 162 (1187)
T ss_pred hHhHHHHHh-----------------------------ccccchHHHHHHHHHHHHHHHHHh---hcchhhhhccccceE
Confidence 999888653 556788888889999999999999 899999999999999
Q ss_pred EcCCCCeeecccccceecCCCC-ccccccccccccCCcccCCCC---CCCCCcCcchhHHHHHHHHHhCCCCCCCCCCcc
Q 003504 670 LDMNLEPRLSDFGLAKIFGNGL-DEEIARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELITGKKPLGDDYPEE 745 (815)
Q Consensus 670 l~~~~~~kl~Dfgla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~---~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~ 745 (815)
++-+|.++++|||++-...... ....+.||++|||||++++.. ..|+.++||||||+.|.||..+.+|-....+
T Consensus 163 ~TldGdirLADFGVSAKn~~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnp-- 240 (1187)
T KOG0579|consen 163 LTLDGDIRLADFGVSAKNKSTRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNP-- 240 (1187)
T ss_pred EEecCcEeeecccccccchhHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccch--
Confidence 9999999999999986543322 345678999999999987654 3378899999999999999999999764332
Q ss_pred ccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 746 KEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 746 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
...+-.+...+ +|.+ ..|..+...+.++..+|+.++|..||+++++++
T Consensus 241 -----MRVllKiaKSe------PPTL--lqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 241 -----MRVLLKIAKSE------PPTL--LQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred -----HHHHHHHhhcC------CCcc--cCcchhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence 22222222221 2222 237778889999999999999999999999975
No 314
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=5.3e-34 Score=298.15 Aligned_cols=242 Identities=24% Similarity=0.280 Sum_probs=195.1
Q ss_pred ecccCCeeeEEEEcC-CCcEEEEEEeecCCc---ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeCCCCCh
Q 003504 516 LAEGKFGPVYRGFLP-GGIHVAVKVLVHGST---LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNL 591 (815)
Q Consensus 516 ig~G~~g~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL 591 (815)
||.|+||.||+|+.. +++.||+|++..... ...+.+.+|++++++++||||+++++++.++...++|+||+++|+|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 689999999999964 588999999865322 2346789999999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCceEEc
Q 003504 592 QNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLD 671 (815)
Q Consensus 592 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NIll~ 671 (815)
.+++... ..+++..+..++.|++.||+||| +.+++|+||+|+||+++
T Consensus 81 ~~~l~~~------------------------------~~l~~~~~~~~~~~i~~~l~~lH---~~~~~h~dl~~~nilv~ 127 (262)
T cd05572 81 WTILRDR------------------------------GLFDEYTARFYIACVVLAFEYLH---NRGIIYRDLKPENLLLD 127 (262)
T ss_pred HHHHhhc------------------------------CCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCHHHEEEc
Confidence 9999652 23677888999999999999999 89999999999999999
Q ss_pred CCCCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCccccccHH
Q 003504 672 MNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLV 751 (815)
Q Consensus 672 ~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~ 751 (815)
.++.+||+|||+++............|+..|+|||.+.... ++.++|+||||+++||+++|+.||..... +..
T Consensus 128 ~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~--~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~ 200 (262)
T cd05572 128 SNGYVKLVDFGFAKKLKSGQKTWTFCGTPEYVAPEIILNKG--YDFSVDYWSLGILLYELLTGRPPFGEDDE-----DPM 200 (262)
T ss_pred CCCCEEEeeCCcccccCcccccccccCCcCccChhHhcCCC--CCChhhhhhhHHHHHHHHhCCCCcCCCCC-----CHH
Confidence 99999999999998776543334456889999999986555 68899999999999999999999975331 112
Q ss_pred HHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCC-----HHHHHH
Q 003504 752 SWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPS-----MQQIVG 806 (815)
Q Consensus 752 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs-----~~~v~~ 806 (815)
......... ......+...+.++.+++.+||..+|++||+ ++|+++
T Consensus 201 ~~~~~~~~~---------~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 201 EIYNDILKG---------NGKLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred HHHHHHhcc---------CCCCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 222222110 0111123334678999999999999999999 666654
No 315
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.9e-35 Score=312.54 Aligned_cols=243 Identities=23% Similarity=0.379 Sum_probs=190.4
Q ss_pred CCeecccCCeeeEEEEc-CCCcEEEEEEee--cC--CcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCe--eEEEEEe
Q 003504 513 GTLLAEGKFGPVYRGFL-PGGIHVAVKVLV--HG--STLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQ--RIAIYDY 585 (815)
Q Consensus 513 ~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~--~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~--~~lv~ey 585 (815)
..+||+|+|-+||||.. .+|..||--.++ +- +....+.|..|+.+|+.|+||||++++.++.+... ..+|+|.
T Consensus 45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL 124 (632)
T KOG0584|consen 45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITEL 124 (632)
T ss_pred hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeec
Confidence 46899999999999985 457788743332 11 23334789999999999999999999999988655 6789999
Q ss_pred CCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCC
Q 003504 586 MENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKA 665 (815)
Q Consensus 586 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~ 665 (815)
|..|+|..|+.+. ...+.+...+|++||++||.|||+. .+||||||||.
T Consensus 125 ~TSGtLr~Y~kk~------------------------------~~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKC 173 (632)
T KOG0584|consen 125 FTSGTLREYRKKH------------------------------RRVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKC 173 (632)
T ss_pred ccCCcHHHHHHHh------------------------------ccCCHHHHHHHHHHHHHHhhhhhcC-CCCcccccccc
Confidence 9999999999763 2466778899999999999999964 68999999999
Q ss_pred CceEEcC-CCCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCc
Q 003504 666 SSVYLDM-NLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPE 744 (815)
Q Consensus 666 ~NIll~~-~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~ 744 (815)
+||+|+. .|.+||+|.|+|..+.... .....|||.|||||+.. .. |.+..||||||++|+||+|+..||.....
T Consensus 174 DNIFinG~~G~VKIGDLGLAtl~r~s~-aksvIGTPEFMAPEmYE-E~--YnE~VDVYaFGMCmLEMvT~eYPYsEC~n- 248 (632)
T KOG0584|consen 174 DNIFVNGNLGEVKIGDLGLATLLRKSH-AKSVIGTPEFMAPEMYE-EN--YNELVDVYAFGMCMLEMVTSEYPYSECTN- 248 (632)
T ss_pred ceEEEcCCcCceeecchhHHHHhhccc-cceeccCccccChHHHh-hh--cchhhhhhhhhHHHHHHHhccCChhhhCC-
Confidence 9999985 4899999999999876543 33367999999999876 33 79999999999999999999999985321
Q ss_pred cccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 745 EKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
..++.+-+ ... +.+..+. .-...++.+++.+|+.. .++|||+.|+++
T Consensus 249 --~AQIYKKV---~SG-----iKP~sl~----kV~dPevr~fIekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 249 --PAQIYKKV---TSG-----IKPAALS----KVKDPEVREFIEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred --HHHHHHHH---HcC-----CCHHHhh----ccCCHHHHHHHHHHhcC-chhccCHHHHhh
Confidence 11222211 111 1111111 11235788999999999 999999999985
No 316
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=6.3e-34 Score=307.70 Aligned_cols=259 Identities=22% Similarity=0.274 Sum_probs=192.4
Q ss_pred Ceeccc--CCeeeEEEEc-CCCcEEEEEEeecCCc--ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeCCC
Q 003504 514 TLLAEG--KFGPVYRGFL-PGGIHVAVKVLVHGST--LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMEN 588 (815)
Q Consensus 514 ~~ig~G--~~g~Vy~~~~-~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 588 (815)
..||+| +||+||+|+. .+|+.||||++..... ...+.+.+|+.+++.++||||+++++++..++..++|+||+++
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~ 83 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY 83 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence 456666 8999999995 5789999999865322 2235788999999999999999999999999999999999999
Q ss_pred CChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCce
Q 003504 589 GNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSV 668 (815)
Q Consensus 589 gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NI 668 (815)
|+|.+++.... ...+++.....++.|++.||+||| +.+++||||||+||
T Consensus 84 ~~l~~~l~~~~----------------------------~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivHrDlkp~Ni 132 (328)
T cd08226 84 GSANSLLKTYF----------------------------PEGMSEALIGNILFGALRGLNYLH---QNGYIHRNIKASHI 132 (328)
T ss_pred CCHHHHHHhhc----------------------------ccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHE
Confidence 99999987521 224678888899999999999999 88999999999999
Q ss_pred EEcCCCCeeecccccceecCCCC-c-------cccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCC
Q 003504 669 YLDMNLEPRLSDFGLAKIFGNGL-D-------EEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGD 740 (815)
Q Consensus 669 ll~~~~~~kl~Dfgla~~~~~~~-~-------~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~ 740 (815)
+++.++.+|++||+.+....... . .....++..|+|||++.+....++.++|||||||++||+++|+.||..
T Consensus 133 ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~ 212 (328)
T cd08226 133 LISGDGLVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQD 212 (328)
T ss_pred EEeCCCcEEEechHHHhhhhccCccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 99999999999998654332111 0 111235667999999876543468899999999999999999999975
Q ss_pred CCCccccccHHHHHH--------------------------------HHHhcCCCCccccccccCCCCHHHHHHHHHHHh
Q 003504 741 DYPEEKEGNLVSWVR--------------------------------GLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGY 788 (815)
Q Consensus 741 ~~~~~~~~~~~~~~~--------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 788 (815)
....+. ...... ............++.+....+..+...+.+++.
T Consensus 213 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 289 (328)
T cd08226 213 MLRTQM---LLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVE 289 (328)
T ss_pred cChHHH---HHHHhcCCCCCCccccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHH
Confidence 322111 000000 000000000111112222224456788999999
Q ss_pred hccccCCCCCCCHHHHHH
Q 003504 789 LCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 789 ~Cl~~dP~~RPs~~~v~~ 806 (815)
+||..||++|||+.++++
T Consensus 290 ~~l~~dP~~Rpta~e~l~ 307 (328)
T cd08226 290 LCLQQDPEKRPSASSLLS 307 (328)
T ss_pred HHccCCcccCCCHHHHhh
Confidence 999999999999999974
No 317
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=8.8e-34 Score=300.08 Aligned_cols=264 Identities=22% Similarity=0.278 Sum_probs=198.6
Q ss_pred CCCCCeecccCCeeeEEEEcC-CCcEEEEEEeecCCc-ccHHHHHHHHHHhcCCC-CCCceeeeeEEEeCCeeEEEEEeC
Q 003504 510 FDRGTLLAEGKFGPVYRGFLP-GGIHVAVKVLVHGST-LTDQEAARELEYLGRIK-HPNLVPLTGYCIAGDQRIAIYDYM 586 (815)
Q Consensus 510 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lv~ey~ 586 (815)
|++.+.||+|+||.||+|+.. +++.||||++..... .......+|+..+.+++ ||||+++++++.+.+..++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 566789999999999999965 578899999865432 22334567999999999 999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCC
Q 003504 587 ENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKAS 666 (815)
Q Consensus 587 ~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~ 666 (815)
+|+|.+++... ....+++..+..++.|++.||.||| +.+++|+||+|+
T Consensus 81 -~~~l~~~~~~~----------------------------~~~~~~~~~~~~~~~~l~~~l~~Lh---~~~i~H~dl~~~ 128 (283)
T cd07830 81 -EGNLYQLMKDR----------------------------KGKPFSESVIRSIIYQILQGLAHIH---KHGFFHRDLKPE 128 (283)
T ss_pred -CCCHHHHHHhc----------------------------ccccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChh
Confidence 88999988752 1235789999999999999999999 789999999999
Q ss_pred ceEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCccc
Q 003504 667 SVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEK 746 (815)
Q Consensus 667 NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~ 746 (815)
||++++++.++|+|||+++............++..|+|||.+..... ++.++||||||+++||+++|+.||......+.
T Consensus 129 ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~-~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~ 207 (283)
T cd07830 129 NLLVSGPEVVKIADFGLAREIRSRPPYTDYVSTRWYRAPEILLRSTS-YSSPVDIWALGCIMAELYTLRPLFPGSSEIDQ 207 (283)
T ss_pred hEEEcCCCCEEEeecccceeccCCCCcCCCCCcccccCceeeecCcC-cCCccchhhHHHHHHHHHhCCCccCCCChHHH
Confidence 99999999999999999987755444444568889999998754432 68899999999999999999999865432211
Q ss_pred cccHHH---------HHHHHHhcCCCCcccccccc---CCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 747 EGNLVS---------WVRGLVRNNKGSRAIDPKIR---DTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 747 ~~~~~~---------~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
.....+ |.............+..... .........++.+++.+||+.+|++||+++|++.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 208 LYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred HHHHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 111111 11111001111111110000 0001112467899999999999999999999875
No 318
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=1.8e-33 Score=293.16 Aligned_cols=248 Identities=28% Similarity=0.408 Sum_probs=203.9
Q ss_pred CCCCCCeecccCCeeeEEEEcC-CCcEEEEEEeecCCc--ccHHHHHHHHHHhcCCCCCCceeeeeEEEeC--CeeEEEE
Q 003504 509 NFDRGTLLAEGKFGPVYRGFLP-GGIHVAVKVLVHGST--LTDQEAARELEYLGRIKHPNLVPLTGYCIAG--DQRIAIY 583 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lv~ 583 (815)
+|...+.||+|++|.||+|... ++..|++|++..... ...+.+.+|++++++++||||+++++++... ...++|+
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 4677899999999999999965 788999999865432 3456789999999999999999999999988 8899999
Q ss_pred EeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccC
Q 003504 584 DYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDI 663 (815)
Q Consensus 584 ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDl 663 (815)
||+++++|.+++... ..+++..+..++.|++.||+||| +.+++|+||
T Consensus 81 e~~~~~~L~~~~~~~------------------------------~~~~~~~~~~~~~~l~~~l~~lh---~~~~~h~dl 127 (260)
T cd06606 81 EYVSGGSLSSLLKKF------------------------------GKLPEPVIRKYTRQILEGLAYLH---SNGIVHRDI 127 (260)
T ss_pred EecCCCcHHHHHHHc------------------------------CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCC
Confidence 999999999999652 26789999999999999999999 789999999
Q ss_pred CCCceEEcCCCCeeecccccceecCCCCc---cccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCC
Q 003504 664 KASSVYLDMNLEPRLSDFGLAKIFGNGLD---EEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGD 740 (815)
Q Consensus 664 k~~NIll~~~~~~kl~Dfgla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~ 740 (815)
+|+||+++.++.++|+|||.+........ .....++..|+|||...... .+.++||||||+++|++++|+.||..
T Consensus 128 ~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~--~~~~~Dv~slG~il~~l~~g~~p~~~ 205 (260)
T cd06606 128 KGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEE--YGRAADIWSLGCTVIEMATGKPPWSE 205 (260)
T ss_pred CHHHEEEcCCCCEEEcccccEEecccccccccccCCCCCccccCHhhhcCCC--CCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 99999999999999999999988765442 34456889999999987765 68899999999999999999999975
Q ss_pred CCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 741 DYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 741 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
.. ........... .......+...+.++.+++.+|+..+|++||++.++++
T Consensus 206 ~~------~~~~~~~~~~~---------~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 206 LG------NPMAALYKIGS---------SGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred CC------chHHHHHhccc---------cCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 32 11111111110 11111223445678999999999999999999999985
No 319
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=4.3e-34 Score=312.18 Aligned_cols=262 Identities=19% Similarity=0.243 Sum_probs=196.7
Q ss_pred hcCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecC--CcccHHHHHHHHHHhcCCCCCCceeeeeEEEeC------C
Q 003504 507 TSNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHG--STLTDQEAARELEYLGRIKHPNLVPLTGYCIAG------D 577 (815)
Q Consensus 507 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~------~ 577 (815)
.++|+..+.||+|+||.||+|.. .+++.||||.+... .......+.+|+.++++++||||+++++++... .
T Consensus 15 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 94 (353)
T cd07850 15 LKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQ 94 (353)
T ss_pred hcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccC
Confidence 46799999999999999999994 57899999998642 223345677899999999999999999988643 2
Q ss_pred eeEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCC
Q 003504 578 QRIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPP 657 (815)
Q Consensus 578 ~~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ 657 (815)
..++||||+.+ +|.+.+.. .++......++.|++.||+||| +.+
T Consensus 95 ~~~lv~e~~~~-~l~~~~~~--------------------------------~l~~~~~~~~~~ql~~aL~~LH---~~g 138 (353)
T cd07850 95 DVYLVMELMDA-NLCQVIQM--------------------------------DLDHERMSYLLYQMLCGIKHLH---SAG 138 (353)
T ss_pred cEEEEEeccCC-CHHHHHhh--------------------------------cCCHHHHHHHHHHHHHHHHHHH---hCC
Confidence 46899999965 88887743 1567778889999999999999 889
Q ss_pred eeeccCCCCceEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCC
Q 003504 658 IIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKP 737 (815)
Q Consensus 658 ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p 737 (815)
|+||||||+||+++.++.+||+|||+++............++..|+|||.+.+.. ++.++|||||||++|+|++|+.|
T Consensus 139 i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~DvwslG~~l~~l~~g~~p 216 (353)
T cd07850 139 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG--YKENVDIWSVGCIMGEMIRGTVL 216 (353)
T ss_pred eeeCCCCHHHEEECCCCCEEEccCccceeCCCCCCCCCCcccccccCHHHHhCCC--CCCchhhHhHHHHHHHHHHCCCC
Confidence 9999999999999999999999999998765544334456889999999987665 78999999999999999999999
Q ss_pred CCCCCCccccccHH--------HH-------HHHHHhcCCC------Cccccccc----cCCCCHHHHHHHHHHHhhccc
Q 003504 738 LGDDYPEEKEGNLV--------SW-------VRGLVRNNKG------SRAIDPKI----RDTGPEKQMEEALKIGYLCTA 792 (815)
Q Consensus 738 ~~~~~~~~~~~~~~--------~~-------~~~~~~~~~~------~~~~~~~~----~~~~~~~~~~~~~~l~~~Cl~ 792 (815)
|...........+. .+ .......... .+...... ....+...+.++.+++.+|++
T Consensus 217 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~ 296 (353)
T cd07850 217 FPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLV 296 (353)
T ss_pred CCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcC
Confidence 97532211110100 00 0001110000 00011100 011122346678999999999
Q ss_pred cCCCCCCCHHHHHH
Q 003504 793 DLPLKRPSMQQIVG 806 (815)
Q Consensus 793 ~dP~~RPs~~~v~~ 806 (815)
.||++||++.|+++
T Consensus 297 ~dP~~R~t~~eiL~ 310 (353)
T cd07850 297 IDPEKRISVDDALQ 310 (353)
T ss_pred CChhhCcCHHHHhc
Confidence 99999999999985
No 320
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=1.3e-33 Score=300.76 Aligned_cols=254 Identities=22% Similarity=0.351 Sum_probs=195.6
Q ss_pred cCCCCCCeecccCCeeeEEEEcCC-CcEEEEEEeecCCc-ccHHHHHHHHHHhcCCC-CCCceeeeeEEEeCCeeEEEEE
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFLPG-GIHVAVKVLVHGST-LTDQEAARELEYLGRIK-HPNLVPLTGYCIAGDQRIAIYD 584 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lv~e 584 (815)
++|++.+.||+|+||.||+|...+ ++.||||.+..... .....+.+|++++.+.. ||||++++++|.+....++|||
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e 94 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICME 94 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEee
Confidence 567888999999999999999764 88999999875432 23455677887776665 9999999999999999999999
Q ss_pred eCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCC
Q 003504 585 YMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIK 664 (815)
Q Consensus 585 y~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk 664 (815)
|+++ ++.+++... ...+++..+.+++.|++.||+|||+ ..+|+||||+
T Consensus 95 ~~~~-~l~~l~~~~-----------------------------~~~l~~~~~~~i~~~i~~~l~~lH~--~~~i~H~dl~ 142 (296)
T cd06618 95 LMST-CLDKLLKRI-----------------------------QGPIPEDILGKMTVAIVKALHYLKE--KHGVIHRDVK 142 (296)
T ss_pred ccCc-CHHHHHHHh-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHh--hCCEecCCCc
Confidence 9864 777776531 2367888999999999999999993 2589999999
Q ss_pred CCceEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCCC--CCCCCcCcchhHHHHHHHHHhCCCCCCCCC
Q 003504 665 ASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDS--DFPTPKSDVYCYGVVLLELITGKKPLGDDY 742 (815)
Q Consensus 665 ~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~ 742 (815)
|+||+++.++.+||+|||++.............++..|+|||.+.+.. ..++.++||||||+++|||++|+.||....
T Consensus 143 p~nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~ 222 (296)
T cd06618 143 PSNILLDASGNVKLCDFGISGRLVDSKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCK 222 (296)
T ss_pred HHHEEEcCCCCEEECccccchhccCCCcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcch
Confidence 999999999999999999998765443334445788999999987553 336789999999999999999999996421
Q ss_pred CccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003504 743 PEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGL 807 (815)
Q Consensus 743 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~ 807 (815)
.. ............ +... ....++.++.+++.+||..||++||++.++++.
T Consensus 223 ~~------~~~~~~~~~~~~------~~~~--~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 223 TE------FEVLTKILQEEP------PSLP--PNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred hH------HHHHHHHhcCCC------CCCC--CCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 11 111111221110 0110 011245678999999999999999999999754
No 321
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=1.1e-33 Score=298.51 Aligned_cols=243 Identities=22% Similarity=0.255 Sum_probs=187.1
Q ss_pred eecccCCeeeEEEEc-CCCcEEEEEEeecCCcc---cHHHHHHHHHH---hcCCCCCCceeeeeEEEeCCeeEEEEEeCC
Q 003504 515 LLAEGKFGPVYRGFL-PGGIHVAVKVLVHGSTL---TDQEAARELEY---LGRIKHPNLVPLTGYCIAGDQRIAIYDYME 587 (815)
Q Consensus 515 ~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~---~~~~~~~E~~~---l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 587 (815)
.||+|+||.||+|.. .+++.||+|.+...... ....+.+|..+ +...+||||+.+++++...+..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 489999999999995 56889999998654221 12233444433 334479999999999999889999999999
Q ss_pred CCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCc
Q 003504 588 NGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASS 667 (815)
Q Consensus 588 ~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~N 667 (815)
+|+|.+++.. ...+++.....++.|++.||+||| +.+|+||||||+|
T Consensus 81 ~~~L~~~i~~------------------------------~~~l~~~~~~~i~~qi~~al~~lH---~~~ivH~dikp~N 127 (279)
T cd05633 81 GGDLHYHLSQ------------------------------HGVFSEKEMRFYATEIILGLEHMH---NRFVVYRDLKPAN 127 (279)
T ss_pred CCCHHHHHHh------------------------------cCCCCHHHHHHHHHHHHHHHHHHH---HCCcCCCCCCHHH
Confidence 9999998864 235789999999999999999999 8899999999999
Q ss_pred eEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCcccc
Q 003504 668 VYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKE 747 (815)
Q Consensus 668 Ill~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~ 747 (815)
|++++++.+||+|||++...... ......|+..|+|||.+..... ++.++|||||||++||+++|+.||........
T Consensus 128 il~~~~~~~~l~dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~-~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~- 204 (279)
T cd05633 128 ILLDEHGHVRISDLGLACDFSKK-KPHASVGTHGYMAPEVLQKGTA-YDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK- 204 (279)
T ss_pred EEECCCCCEEEccCCcceecccc-CccCcCCCcCccCHHHhcCCCC-CCchhhhHHHHHHHHHHHhCCCCcCCCCCcCH-
Confidence 99999999999999999765432 2233468999999998764332 68899999999999999999999975322111
Q ss_pred ccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCC-----CHHHHHHH
Q 003504 748 GNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRP-----SMQQIVGL 807 (815)
Q Consensus 748 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----s~~~v~~~ 807 (815)
........ ......+...+.++.+++.+|+..||++|| +++++++.
T Consensus 205 ----~~~~~~~~----------~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 205 ----HEIDRMTL----------TVNVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred ----HHHHHHhh----------cCCcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 11111110 011112344567889999999999999999 59888763
No 322
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8.8e-36 Score=338.36 Aligned_cols=254 Identities=28% Similarity=0.390 Sum_probs=201.8
Q ss_pred HHhcCCCCCCeecccCCeeeEEEE-cCCCcEEEEEEeecCCc--ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEE
Q 003504 505 SATSNFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHGST--LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIA 581 (815)
Q Consensus 505 ~~~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 581 (815)
..+.+++.+..||.|.||.||-|. .++|.-.|||.+..... ..-..+.+|+.++..++|||+|+++|+-...+..++
T Consensus 1232 nV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~I 1311 (1509)
T KOG4645|consen 1232 NVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYI 1311 (1509)
T ss_pred cceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHH
Confidence 345678889999999999999999 56788899998764322 223467899999999999999999999999999999
Q ss_pred EEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeec
Q 003504 582 IYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHR 661 (815)
Q Consensus 582 v~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHr 661 (815)
.||||++|+|.+.+... ...+...-.....|++.|++||| +.+||||
T Consensus 1312 FMEyC~~GsLa~ll~~g------------------------------ri~dE~vt~vyt~qll~gla~LH---~~gIVHR 1358 (1509)
T KOG4645|consen 1312 FMEYCEGGSLASLLEHG------------------------------RIEDEMVTRVYTKQLLEGLAYLH---EHGIVHR 1358 (1509)
T ss_pred HHHHhccCcHHHHHHhc------------------------------chhhhhHHHHHHHHHHHHHHHHH---hcCceec
Confidence 99999999999999652 12233333446778999999999 8999999
Q ss_pred cCCCCceEEcCCCCeeecccccceecCCCC-----ccccccccccccCCcccCCCCC-CCCCcCcchhHHHHHHHHHhCC
Q 003504 662 DIKASSVYLDMNLEPRLSDFGLAKIFGNGL-----DEEIARGSPGYIPPEFAQPDSD-FPTPKSDVYCYGVVLLELITGK 735 (815)
Q Consensus 662 Dlk~~NIll~~~~~~kl~Dfgla~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~-~~~~~~Dv~S~Gvvl~el~tg~ 735 (815)
||||.||+++.+|.+|.+|||.|....+.. .-....||+.|||||++.+... .-.-+.||||+|||+.||+||+
T Consensus 1359 DIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGk 1438 (1509)
T KOG4645|consen 1359 DIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGK 1438 (1509)
T ss_pred CCCccceeeecCCcEEeecccceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCC
Confidence 999999999999999999999999876542 1234569999999999886542 1355889999999999999999
Q ss_pred CCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003504 736 KPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGL 807 (815)
Q Consensus 736 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~ 807 (815)
.||...+.+ |.-.+.- -.+-.++.|+....+-.+++..|+..||++|+++.|+++.
T Consensus 1439 rPW~~~dne--------~aIMy~V--------~~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1439 RPWAELDNE--------WAIMYHV--------AAGHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred Cchhhccch--------hHHHhHH--------hccCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 999753221 2211110 1112233477788899999999999999999999988764
No 323
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=5.2e-34 Score=303.81 Aligned_cols=264 Identities=17% Similarity=0.223 Sum_probs=195.7
Q ss_pred cCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCc--ccHHHHHHHHHHhcCCC-CCCceeeeeEEEeCCe-----
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGST--LTDQEAARELEYLGRIK-HPNLVPLTGYCIAGDQ----- 578 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~----- 578 (815)
++|+..+.||+|+||.||+|.. .+++.||||.+..... .....+.+|+.++++++ ||||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 3688889999999999999995 4689999998765322 22357888999999995 6999999999987665
Q ss_pred eEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCe
Q 003504 579 RIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPI 658 (815)
Q Consensus 579 ~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~i 658 (815)
.++||||+++ +|.+++..... .....+++.....++.|++.||+||| +.+|
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~qi~~~L~~LH---~~~i 131 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGR-------------------------GPGRPLPAKTIKSFMYQLLKGVAHCH---KHGV 131 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcc-------------------------cCCCCCCHHHHHHHHHHHHHHHHHHH---HCCe
Confidence 7999999986 89998865211 11345789999999999999999999 8899
Q ss_pred eeccCCCCceEEcC-CCCeeecccccceecCCCC-ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCC
Q 003504 659 IHRDIKASSVYLDM-NLEPRLSDFGLAKIFGNGL-DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKK 736 (815)
Q Consensus 659 vHrDlk~~NIll~~-~~~~kl~Dfgla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~ 736 (815)
+||||||+||+++. ++.+||+|||+++...... ......+++.|+|||++.+... ++.++|||||||++|||++|..
T Consensus 132 ~H~dl~~~nil~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~-~~~~~Di~slG~~l~~l~~g~~ 210 (295)
T cd07837 132 MHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTH-YSTPVDIWSVGCIFAEMSRKQP 210 (295)
T ss_pred eecCCChHHEEEecCCCeEEEeecccceecCCCccccCCcccccCCCChHHhhCCCC-CCchHHHHHHHHHHHHHHcCCC
Confidence 99999999999998 8899999999998654322 2223356889999998865432 6889999999999999999999
Q ss_pred CCCCCCCccccccHHHHHHHHHhcCCCCcccc-----------ccccC----CCCHHHHHHHHHHHhhccccCCCCCCCH
Q 003504 737 PLGDDYPEEKEGNLVSWVRGLVRNNKGSRAID-----------PKIRD----TGPEKQMEEALKIGYLCTADLPLKRPSM 801 (815)
Q Consensus 737 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~----~~~~~~~~~~~~l~~~Cl~~dP~~RPs~ 801 (815)
||......+. +.+.... ... ....... +.... ......+.++.+++.+||..+|++||++
T Consensus 211 ~~~~~~~~~~---~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~ 285 (295)
T cd07837 211 LFPGDSELQQ---LLHIFKL-LGT-PTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISA 285 (295)
T ss_pred CCCCCCHHHH---HHHHHHH-hCC-CChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCH
Confidence 9975322111 1111110 000 0000000 00000 0012345778999999999999999999
Q ss_pred HHHHH
Q 003504 802 QQIVG 806 (815)
Q Consensus 802 ~~v~~ 806 (815)
.+++.
T Consensus 286 ~eil~ 290 (295)
T cd07837 286 KAALT 290 (295)
T ss_pred HHHhc
Confidence 99875
No 324
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=8.1e-34 Score=299.31 Aligned_cols=244 Identities=25% Similarity=0.275 Sum_probs=192.2
Q ss_pred ecccCCeeeEEEEc-CCCcEEEEEEeecCCc---ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeCCCCCh
Q 003504 516 LAEGKFGPVYRGFL-PGGIHVAVKVLVHGST---LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNL 591 (815)
Q Consensus 516 ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL 591 (815)
||+|+||+||+|.. .+|+.||+|.+..... .....+.+|++++++++||||+++++++...+..++||||+++|+|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 68999999999984 5688999999865321 2244567899999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCceEEc
Q 003504 592 QNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLD 671 (815)
Q Consensus 592 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NIll~ 671 (815)
.+++... ....+++..+..++.|++.||.||| +.+++||||+|+||+++
T Consensus 81 ~~~l~~~----------------------------~~~~~~~~~~~~~~~ql~~~l~~lH---~~~i~H~di~p~Nil~~ 129 (277)
T cd05577 81 KYHIYNV----------------------------GEPGFPEARAIFYAAQIICGLEHLH---QRRIVYRDLKPENVLLD 129 (277)
T ss_pred HHHHHHc----------------------------CcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEC
Confidence 9999752 1235788889999999999999999 88999999999999999
Q ss_pred CCCCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCccccccHH
Q 003504 672 MNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLV 751 (815)
Q Consensus 672 ~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~ 751 (815)
.++.+||+|||.+.............++..|+|||.+.+.. ++.++|||||||++||+++|+.||...........+.
T Consensus 130 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~--~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~ 207 (277)
T cd05577 130 DHGNVRISDLGLAVELKGGKKIKGRAGTPGYMAPEVLQGEV--YDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELK 207 (277)
T ss_pred CCCCEEEccCcchhhhccCCccccccCCCCcCCHHHhcCCC--CCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHH
Confidence 99999999999998765433334456788999999987665 6889999999999999999999997533211110010
Q ss_pred HHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCC-----CHHHHHH
Q 003504 752 SWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRP-----SMQQIVG 806 (815)
Q Consensus 752 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----s~~~v~~ 806 (815)
. .... .....+...+..+.+++.+||+.+|++|| ++.+++.
T Consensus 208 ---~-~~~~----------~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 208 ---R-RTLE----------MAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred ---h-cccc----------ccccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHh
Confidence 0 0000 01111333466789999999999999999 5555653
No 325
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.9e-34 Score=305.66 Aligned_cols=248 Identities=25% Similarity=0.368 Sum_probs=206.9
Q ss_pred hcCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCcc--cHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEE
Q 003504 507 TSNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGSTL--TDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIY 583 (815)
Q Consensus 507 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 583 (815)
...|.+...||+|.|+.|..|+. .++..||||.+.+..-. ..+.+.+|+++|..++|||||+++.+.......++||
T Consensus 55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~ 134 (596)
T KOG0586|consen 55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVM 134 (596)
T ss_pred ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEE
Confidence 34677889999999999999994 56899999998764322 2345889999999999999999999999999999999
Q ss_pred EeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccC
Q 003504 584 DYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDI 663 (815)
Q Consensus 584 ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDl 663 (815)
||+.+|.+++++... + .........++.|+..|++||| ++.||||||
T Consensus 135 eya~~ge~~~yl~~~-----------------------------g-r~~e~~ar~~F~q~vsaveYcH---~k~ivHrdL 181 (596)
T KOG0586|consen 135 EYASGGELFDYLVKH-----------------------------G-RMKEKEARAKFRQIVSAVEYCH---SKNIVHRDL 181 (596)
T ss_pred EeccCchhHHHHHhc-----------------------------c-cchhhhhhhhhHHHHHHHHHHh---hcceecccc
Confidence 999999999999763 1 1222556678899999999999 899999999
Q ss_pred CCCceEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCC
Q 003504 664 KASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYP 743 (815)
Q Consensus 664 k~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~ 743 (815)
|++|||++.++++||+|||++..+..+......+|++.|.|||++.+.. +.++++|+||+||++|-|+.|..||++..-
T Consensus 182 k~eNilL~~~mnikIaDfgfS~~~~~~~~lqt~cgsppyAaPEl~~g~~-y~gpe~D~Wslgvvly~LV~GsLPFDG~~l 260 (596)
T KOG0586|consen 182 KAENILLDENMNIKIADFGFSTFFDYGLMLQTFCGSPPYAAPELFNGKK-YDGPEVDIWSLGVVLYALVEGSLPFDGQNL 260 (596)
T ss_pred chhhcccccccceeeeccccceeecccccccccCCCCCccChHhhcCcc-cCCcceehhhhhhhheeeeecccccCCccc
Confidence 9999999999999999999999999888888999999999999999887 479999999999999999999999986433
Q ss_pred ccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 744 EEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 744 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
.+.. .+++...++. +.....+.-+++.+.+..+|.+|++++++.+
T Consensus 261 k~Lr----------------~rvl~gk~rI--p~~ms~dce~lLrk~lvl~Pskr~~~dqim~ 305 (596)
T KOG0586|consen 261 KELR----------------PRVLRGKYRI--PFYMSCDCEDLLRKFLVLNPSKRGPCDQIMK 305 (596)
T ss_pred cccc----------------chheeeeecc--cceeechhHHHHHHhhccCccccCCHHHhhh
Confidence 2221 1111222222 3334456778999999999999999999864
No 326
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.9e-35 Score=303.18 Aligned_cols=251 Identities=22% Similarity=0.306 Sum_probs=198.4
Q ss_pred hcCCCCCCeecccCCeeeEEEEcCCCcEEEEEEeecC--CcccHHHHHHHHHHhcCCC-CCCceeeeeEEEeCCeeEEEE
Q 003504 507 TSNFDRGTLLAEGKFGPVYRGFLPGGIHVAVKVLVHG--STLTDQEAARELEYLGRIK-HPNLVPLTGYCIAGDQRIAIY 583 (815)
Q Consensus 507 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lv~ 583 (815)
...|++.+.||+||.+.||++...+.+.+|+|++... +......|..|++.|.+|+ |.+|+++++|-..++..|+||
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvm 439 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVM 439 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEe
Confidence 3468889999999999999999988888998876542 3344567999999999995 999999999999999999999
Q ss_pred EeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccC
Q 003504 584 DYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDI 663 (815)
Q Consensus 584 ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDl 663 (815)
||=+. +|..+|.+. .....+| .+..+..|++.|+.++| ..+|||.||
T Consensus 440 E~Gd~-DL~kiL~k~----------------------------~~~~~~~-~lk~ywkqML~aV~~IH---~~gIVHSDL 486 (677)
T KOG0596|consen 440 ECGDI-DLNKILKKK----------------------------KSIDPDW-FLKFYWKQMLLAVKTIH---QHGIVHSDL 486 (677)
T ss_pred ecccc-cHHHHHHhc----------------------------cCCCchH-HHHHHHHHHHHHHHHHH---HhceeecCC
Confidence 98665 999999863 1334456 67789999999999999 899999999
Q ss_pred CCCceEEcCCCCeeecccccceecCCCC---ccccccccccccCCcccCCCCCC---------CCCcCcchhHHHHHHHH
Q 003504 664 KASSVYLDMNLEPRLSDFGLAKIFGNGL---DEEIARGSPGYIPPEFAQPDSDF---------PTPKSDVYCYGVVLLEL 731 (815)
Q Consensus 664 k~~NIll~~~~~~kl~Dfgla~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~---------~~~~~Dv~S~Gvvl~el 731 (815)
||.|+|+-. |.+||+|||.|..+..+. ....-+||+.||+||.+...... .+.++||||+||++|+|
T Consensus 487 KPANFLlVk-G~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqM 565 (677)
T KOG0596|consen 487 KPANFLLVK-GRLKLIDFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQM 565 (677)
T ss_pred CcccEEEEe-eeEEeeeechhcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHH
Confidence 999999874 689999999999887654 23445799999999987654321 57899999999999999
Q ss_pred HhCCCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCH-HHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 732 ITGKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPE-KQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 732 ~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
+.|+.||+. ..+. |.+ ...+.+|.-..++|. ....++.++|..|+++||++||+..++++
T Consensus 566 vYgktPf~~------~~n~--~aK-------l~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 566 VYGKTPFGQ------IINQ--IAK-------LHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred HhcCCchHH------HHHH--HHH-------HHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhc
Confidence 999999974 1111 111 223445544333221 11223899999999999999999999875
No 327
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=1.2e-33 Score=299.56 Aligned_cols=260 Identities=20% Similarity=0.252 Sum_probs=194.9
Q ss_pred CCCCCeecccCCeeeEEEEcC-CCcEEEEEEeecCCcc--cHHHHHHHHHHhcCC---CCCCceeeeeEEEeCCe-----
Q 003504 510 FDRGTLLAEGKFGPVYRGFLP-GGIHVAVKVLVHGSTL--TDQEAARELEYLGRI---KHPNLVPLTGYCIAGDQ----- 578 (815)
Q Consensus 510 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~--~~~~~~~E~~~l~~l---~H~niv~l~g~~~~~~~----- 578 (815)
|++.+.||+|+||.||+|+.. ++..||+|++...... ....+.+|+.++.++ +|||++++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 566789999999999999975 4899999998643222 234566787776655 69999999999998776
Q ss_pred eEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCe
Q 003504 579 RIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPI 658 (815)
Q Consensus 579 ~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~i 658 (815)
.+++|||+++ +|.+++... ....+++..+..++.|++.||+||| +.++
T Consensus 81 ~~l~~e~~~~-~l~~~l~~~----------------------------~~~~l~~~~~~~~~~~i~~al~~LH---~~~i 128 (287)
T cd07838 81 LTLVFEHVDQ-DLATYLSKC----------------------------PKPGLPPETIKDLMRQLLRGVDFLH---SHRI 128 (287)
T ss_pred eEEEehhccc-CHHHHHHHc----------------------------cCCCCCHHHHHHHHHHHHHHHHHHH---HCCe
Confidence 8999999985 899888652 1224788999999999999999999 7899
Q ss_pred eeccCCCCceEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCC
Q 003504 659 IHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738 (815)
Q Consensus 659 vHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~ 738 (815)
+|+||+|+||+++.++.+||+|||.+.............++..|+|||++.+.. ++.++|||||||++|||++|+.||
T Consensus 129 ~h~~l~~~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~--~~~~~Di~s~G~~l~~l~~~~~~~ 206 (287)
T cd07838 129 VHRDLKPQNILVTSDGQVKIADFGLARIYSFEMALTSVVVTLWYRAPEVLLQSS--YATPVDMWSVGCIFAELFRRRPLF 206 (287)
T ss_pred eeccCChhhEEEccCCCEEEeccCcceeccCCcccccccccccccChHHhccCC--CCCcchhhhHHHHHHHHHhCCCcc
Confidence 999999999999999999999999998875544334445788999999987665 688999999999999999999998
Q ss_pred CCCCCccccccHHHHHHHHHhcC---CCC------cccccccc---CCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 739 GDDYPEEKEGNLVSWVRGLVRNN---KGS------RAIDPKIR---DTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 739 ~~~~~~~~~~~~~~~~~~~~~~~---~~~------~~~~~~~~---~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
......+. +.++........ ... ........ ..........+.+++.+||+.||++||++++++.
T Consensus 207 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 207 RGTSEADQ---LDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred cCCChHHH---HHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 75433221 111111110000 000 00000000 0011234577889999999999999999999874
No 328
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.6e-33 Score=299.27 Aligned_cols=251 Identities=26% Similarity=0.295 Sum_probs=196.3
Q ss_pred CCCCCCeecccCCeeeEEEEc----CCCcEEEEEEeecCCc----ccHHHHHHHHHHhcCC-CCCCceeeeeEEEeCCee
Q 003504 509 NFDRGTLLAEGKFGPVYRGFL----PGGIHVAVKVLVHGST----LTDQEAARELEYLGRI-KHPNLVPLTGYCIAGDQR 579 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~----~~~~~vavK~l~~~~~----~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~ 579 (815)
+|++.+.||+|+||.||+|.. .+|..||+|++..... ...+.+.+|++++.++ +|+||+++++++......
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 467789999999999999985 4688999999875322 2345678899999999 599999999999988899
Q ss_pred EEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCee
Q 003504 580 IAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPII 659 (815)
Q Consensus 580 ~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~iv 659 (815)
++||||+++|+|.+++... ..+.+.....++.|+++||+||| +.+++
T Consensus 81 ~lv~e~~~~~~L~~~l~~~------------------------------~~l~~~~~~~~~~qi~~al~~lH---~~~i~ 127 (290)
T cd05613 81 HLILDYINGGELFTHLSQR------------------------------ERFKEQEVQIYSGEIVLALEHLH---KLGII 127 (290)
T ss_pred EEEEecCCCCcHHHHHHHc------------------------------CCCCHHHHHHHHHHHHHHHHHHH---hCCee
Confidence 9999999999999998642 24667778889999999999999 89999
Q ss_pred eccCCCCceEEcCCCCeeecccccceecCCCC--ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCC
Q 003504 660 HRDIKASSVYLDMNLEPRLSDFGLAKIFGNGL--DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKP 737 (815)
Q Consensus 660 HrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p 737 (815)
||||+|+||+++.++.+||+|||+++...... ......|+..|+|||.+.......+.++||||||+++||+++|+.|
T Consensus 128 H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p 207 (290)
T cd05613 128 YRDIKLENILLDSNGHVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASP 207 (290)
T ss_pred ccCCCHHHeEECCCCCEEEeeCccceecccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCC
Confidence 99999999999999999999999998764322 1223458899999999876443367899999999999999999999
Q ss_pred CCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCC-----CHHHHHH
Q 003504 738 LGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRP-----SMQQIVG 806 (815)
Q Consensus 738 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----s~~~v~~ 806 (815)
|...... .....+........ + ..+......+.+++.+||+.||++|| +++++++
T Consensus 208 ~~~~~~~---~~~~~~~~~~~~~~-------~----~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 208 FTVDGEK---NSQAEISRRILKSE-------P----PYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred CCcCCcc---ccHHHHHHHhhccC-------C----CCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 9643221 12222222221111 1 11233456788999999999999997 6666654
No 329
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=6.4e-34 Score=302.88 Aligned_cols=261 Identities=19% Similarity=0.284 Sum_probs=193.7
Q ss_pred cCCCCCCeecccCCeeeEEEEcC-CCcEEEEEEeecCCc--ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEE
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFLP-GGIHVAVKVLVHGST--LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYD 584 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 584 (815)
++|+..+.||+|++|.||+|... +++.||+|.+..... .....+.+|++++++++||||+++++++.+....++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 46888899999999999999954 688999998865322 223568899999999999999999999999999999999
Q ss_pred eCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCC
Q 003504 585 YMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIK 664 (815)
Q Consensus 585 y~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk 664 (815)
|++ ++|.+++... .....++.....++.|++.||+||| +.+++||||+
T Consensus 82 ~~~-~~l~~~~~~~----------------------------~~~~~~~~~~~~~~~qi~~aL~~LH---~~~i~H~dl~ 129 (294)
T PLN00009 82 YLD-LDLKKHMDSS----------------------------PDFAKNPRLIKTYLYQILRGIAYCH---SHRVLHRDLK 129 (294)
T ss_pred ccc-ccHHHHHHhC----------------------------CCCCcCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCC
Confidence 996 5888877542 1223467777889999999999999 7899999999
Q ss_pred CCceEEcC-CCCeeecccccceecCCCC-ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCC
Q 003504 665 ASSVYLDM-NLEPRLSDFGLAKIFGNGL-DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDY 742 (815)
Q Consensus 665 ~~NIll~~-~~~~kl~Dfgla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~ 742 (815)
|+||+++. ++.+||+|||++....... ......+++.|+|||++.+.. .++.++|||||||++|||++|+.||....
T Consensus 130 p~nill~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~-~~~~~~Dv~slG~i~~~l~tg~~pf~~~~ 208 (294)
T PLN00009 130 PQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSR-HYSTPVDIWSVGCIFAEMVNQKPLFPGDS 208 (294)
T ss_pred cceEEEECCCCEEEEcccccccccCCCccccccCceeecccCHHHHhCCC-CCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 99999985 5579999999997654322 123345788999999876543 26889999999999999999999997533
Q ss_pred CccccccHHHHHHHHHhcCCCCccc------------cccccCC----CCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 743 PEEKEGNLVSWVRGLVRNNKGSRAI------------DPKIRDT----GPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 743 ~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~----~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
..+. +..... ... ....... -+..... .....+.++.+++.+|++.+|++||++.++++
T Consensus 209 ~~~~---~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 209 EIDE---LFKIFR-ILG-TPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred HHHH---HHHHHH-HhC-CCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 2111 111100 000 0000000 0000000 01223466889999999999999999999975
No 330
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=6.8e-34 Score=296.12 Aligned_cols=249 Identities=22% Similarity=0.343 Sum_probs=202.5
Q ss_pred CCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCC--cccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEe
Q 003504 509 NFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGS--TLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDY 585 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 585 (815)
+|++.+.||+|+||.||+++. .++..+|+|.+.... ......+.+|++++++++||||+++++++.+....++|+||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 477789999999999999984 568899999987532 23345678899999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCC
Q 003504 586 MENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKA 665 (815)
Q Consensus 586 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~ 665 (815)
+++++|.+++.... .....+++.....++.|++.||+||| +.+++||||+|
T Consensus 81 ~~~~~L~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~l~~al~~lh---~~~i~h~~l~~ 131 (256)
T cd08530 81 APFGDLSKAISKRK--------------------------KKRKLIPEQEIWRIFIQLLRGLQALH---EQKILHRDLKS 131 (256)
T ss_pred cCCCCHHHHHHHHH--------------------------hhcCCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCc
Confidence 99999999986521 11345788999999999999999999 89999999999
Q ss_pred CceEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCcc
Q 003504 666 SSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEE 745 (815)
Q Consensus 666 ~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~ 745 (815)
+||+++.++.+|++|||+++..... ......|+..|+|||...+.. ++.++|+||||+++||+++|+.||.....++
T Consensus 132 ~ni~~~~~~~~kl~d~g~~~~~~~~-~~~~~~~~~~~~~Pe~~~~~~--~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~ 208 (256)
T cd08530 132 ANILLVANDLVKIGDLGISKVLKKN-MAKTQIGTPHYMAPEVWKGRP--YSYKSDIWSLGCLLYEMATFAPPFEARSMQD 208 (256)
T ss_pred ceEEEecCCcEEEeeccchhhhccC-CcccccCCccccCHHHHCCCC--CCchhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 9999999999999999999877654 233345889999999987665 6889999999999999999999997532211
Q ss_pred ccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 746 KEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 746 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
+. .. .... .....+...+.++.+++.+|+..+|++||++.++++
T Consensus 209 ----~~---~~-~~~~---------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 209 ----LR---YK-VQRG---------KYPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred ----HH---HH-HhcC---------CCCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 11 11 1111 111123456678999999999999999999999975
No 331
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=2.6e-33 Score=301.28 Aligned_cols=260 Identities=22% Similarity=0.207 Sum_probs=191.1
Q ss_pred CCCeecccCCeeeEEEEcCCCcEEEEEEeecC--CcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeCCCC
Q 003504 512 RGTLLAEGKFGPVYRGFLPGGIHVAVKVLVHG--STLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENG 589 (815)
Q Consensus 512 ~~~~ig~G~~g~Vy~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~g 589 (815)
+++.+|.|+++.||++.. +++.||||+++.. .....+.+.+|++++++++||||+++++++.+.+..+++|||+++|
T Consensus 6 i~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~ 84 (314)
T cd08216 6 IGKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYG 84 (314)
T ss_pred hhHhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCC
Confidence 344555566666666655 6889999998764 2334467899999999999999999999999999999999999999
Q ss_pred ChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCceE
Q 003504 590 NLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVY 669 (815)
Q Consensus 590 sL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NIl 669 (815)
+|.++++... ...+++.....++.|++.||+||| +.+|+||||||+||+
T Consensus 85 ~l~~~l~~~~----------------------------~~~~~~~~~~~~~~~l~~~L~~LH---~~~ivH~dlk~~Nil 133 (314)
T cd08216 85 SCEDLLKTHF----------------------------PEGLPELAIAFILKDVLNALDYIH---SKGFIHRSVKASHIL 133 (314)
T ss_pred CHHHHHHHhc----------------------------ccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCcceEE
Confidence 9999997521 224667778899999999999999 889999999999999
Q ss_pred EcCCCCeeecccccceecCCCC--------ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCC
Q 003504 670 LDMNLEPRLSDFGLAKIFGNGL--------DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDD 741 (815)
Q Consensus 670 l~~~~~~kl~Dfgla~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~ 741 (815)
++.++.+||+|||.+....... ......++..|+|||++......++.++|||||||++|||++|+.||...
T Consensus 134 i~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~ 213 (314)
T cd08216 134 LSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDM 213 (314)
T ss_pred EecCCceEEecCccceeeccccccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Confidence 9999999999999887553211 11233467889999998765333688999999999999999999999753
Q ss_pred CCccccccHHHHHHHHH----hcC-------CCCc----cccccc----cCCCCHHHHHHHHHHHhhccccCCCCCCCHH
Q 003504 742 YPEEKEGNLVSWVRGLV----RNN-------KGSR----AIDPKI----RDTGPEKQMEEALKIGYLCTADLPLKRPSMQ 802 (815)
Q Consensus 742 ~~~~~~~~~~~~~~~~~----~~~-------~~~~----~~~~~~----~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ 802 (815)
.... ...+...... ... .... ..++.. ..........++.+++.+||..||++||+++
T Consensus 214 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~ 290 (314)
T cd08216 214 PATQ---MLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSAS 290 (314)
T ss_pred CHHH---HHHHHHhccCccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHH
Confidence 2111 1111000000 000 0000 000000 0111334557889999999999999999999
Q ss_pred HHHH
Q 003504 803 QIVG 806 (815)
Q Consensus 803 ~v~~ 806 (815)
++++
T Consensus 291 ~ll~ 294 (314)
T cd08216 291 QLLN 294 (314)
T ss_pred HHhc
Confidence 9976
No 332
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=7.7e-34 Score=304.52 Aligned_cols=266 Identities=23% Similarity=0.296 Sum_probs=196.3
Q ss_pred hcCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCcc--cHHHHHHHHHHhcCCCCCCceeeeeEEEeC--CeeEE
Q 003504 507 TSNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGSTL--TDQEAARELEYLGRIKHPNLVPLTGYCIAG--DQRIA 581 (815)
Q Consensus 507 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~l 581 (815)
.++|++.+.||+|+||.||+|.. .+|..||+|.++..... ....+.+|+.++++++|+||+++++++... +..++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 35788899999999999999995 46899999998653222 233567899999999999999999998765 46799
Q ss_pred EEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeec
Q 003504 582 IYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHR 661 (815)
Q Consensus 582 v~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHr 661 (815)
||||+.+ +|.+++... ...+++..+..++.|++.||+||| +.+++||
T Consensus 86 v~e~~~~-~l~~~l~~~-----------------------------~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~ 132 (309)
T cd07845 86 VMEYCEQ-DLASLLDNM-----------------------------PTPFSESQVKCLMLQLLRGLQYLH---ENFIIHR 132 (309)
T ss_pred EEecCCC-CHHHHHHhc-----------------------------ccCCCHHHHHHHHHHHHHHHHHHH---hCCeecC
Confidence 9999975 888888642 235788999999999999999999 8899999
Q ss_pred cCCCCceEEcCCCCeeecccccceecCCCC-ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCC
Q 003504 662 DIKASSVYLDMNLEPRLSDFGLAKIFGNGL-DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGD 740 (815)
Q Consensus 662 Dlk~~NIll~~~~~~kl~Dfgla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~ 740 (815)
||||+||+++.++.+||+|||++....... ......++..|+|||.+.+... ++.++|||||||++|||++|+.||..
T Consensus 133 dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~~DvwslG~il~el~~g~~~f~~ 211 (309)
T cd07845 133 DLKVSNLLLTDKGCLKIADFGLARTYGLPAKPMTPKVVTLWYRAPELLLGCTT-YTTAIDMWAVGCILAELLAHKPLLPG 211 (309)
T ss_pred CCCHHHEEECCCCCEEECccceeeecCCccCCCCcccccccccChhhhcCCCC-cCchHHHHHHHHHHHHHHhCCCCCCC
Confidence 999999999999999999999998765432 2223346788999998865432 58899999999999999999999975
Q ss_pred CCCccccccHHHHHHH----H---HhcCCC-Ccc-cccc-cc--CCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 741 DYPEEKEGNLVSWVRG----L---VRNNKG-SRA-IDPK-IR--DTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 741 ~~~~~~~~~~~~~~~~----~---~~~~~~-~~~-~~~~-~~--~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
..+.+....+..+... . ...... ... .... .. .........++.+++.+|+..||++||++++++.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~ 289 (309)
T cd07845 212 KSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE 289 (309)
T ss_pred CCHHHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 4332221111111000 0 000000 000 0000 00 0001123567789999999999999999999975
No 333
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=9.7e-34 Score=302.80 Aligned_cols=263 Identities=23% Similarity=0.292 Sum_probs=196.9
Q ss_pred HHhcCCCCCCeecccCCeeeEEEEcC-CCcEEEEEEeecCC--cccHHHHHHHHHHhcCCCCCCceeeeeEEEeCC----
Q 003504 505 SATSNFDRGTLLAEGKFGPVYRGFLP-GGIHVAVKVLVHGS--TLTDQEAARELEYLGRIKHPNLVPLTGYCIAGD---- 577 (815)
Q Consensus 505 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~---- 577 (815)
...++|++.+.||+|+||.||+|... +++.||||.++... ......+.+|++++++++||||+++++++.+..
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 34578999999999999999999964 58899999987542 223456788999999999999999999987654
Q ss_pred ------eeEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHh
Q 003504 578 ------QRIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLH 651 (815)
Q Consensus 578 ------~~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH 651 (815)
..++|+||+++ ++..++... ...+++.....++.|++.||+|||
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~-----------------------------~~~~~~~~~~~i~~qi~~aL~~LH 133 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESG-----------------------------LVHFSEDHIKSFMKQLLEGLNYCH 133 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcC-----------------------------CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 68999999986 777776531 235788999999999999999999
Q ss_pred cCCCCCeeeccCCCCceEEcCCCCeeecccccceecCCCC--ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHH
Q 003504 652 HGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGL--DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLL 729 (815)
Q Consensus 652 ~~~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~ 729 (815)
+.+|+||||||+||++++++.+||+|||++....... ......++..|+|||.+.+... .+.++|||||||++|
T Consensus 134 ---~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~-~~~~~Di~slG~~~~ 209 (302)
T cd07864 134 ---KKNFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEER-YGPAIDVWSCGCILG 209 (302)
T ss_pred ---hCCeecCCCCHHHEEECCCCcEEeCcccccccccCCcccccccceeccCccChHHhcCCCC-CCchhHHHHHHHHHH
Confidence 7899999999999999999999999999998765432 1122346778999998764432 578999999999999
Q ss_pred HHHhCCCCCCCCCCccccccHHHHHHHHHhcCCC---Ccc--------ccc------cccCCCCHHHHHHHHHHHhhccc
Q 003504 730 ELITGKKPLGDDYPEEKEGNLVSWVRGLVRNNKG---SRA--------IDP------KIRDTGPEKQMEEALKIGYLCTA 792 (815)
Q Consensus 730 el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--------~~~------~~~~~~~~~~~~~~~~l~~~Cl~ 792 (815)
||++|+.||......+. +.. +......... ..+ .++ .... .....+..+.+++.+||.
T Consensus 210 el~~g~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~ 284 (302)
T cd07864 210 ELFTKKPIFQANQELAQ---LEL-ISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLRE-EFSFIPTPALDLLDHMLT 284 (302)
T ss_pred HHHhCCCCCCCCChHHH---HHH-HHHHhCCCChhhcccccccccccccccccccccchhh-hcCCCCHHHHHHHHHHcc
Confidence 99999999975322111 111 1111000000 000 000 0000 011235678999999999
Q ss_pred cCCCCCCCHHHHHH
Q 003504 793 DLPLKRPSMQQIVG 806 (815)
Q Consensus 793 ~dP~~RPs~~~v~~ 806 (815)
.+|++||+++++++
T Consensus 285 ~~P~~Rp~~~~il~ 298 (302)
T cd07864 285 LDPSKRCTAEEALN 298 (302)
T ss_pred CChhhCCCHHHHhc
Confidence 99999999999875
No 334
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=9.3e-34 Score=307.68 Aligned_cols=265 Identities=22% Similarity=0.307 Sum_probs=195.9
Q ss_pred hcCCCCCCeecccCCeeeEEEEcC-CCcEEEEEEeecC--CcccHHHHHHHHHHhcCC-CCCCceeeeeEEEeC--CeeE
Q 003504 507 TSNFDRGTLLAEGKFGPVYRGFLP-GGIHVAVKVLVHG--STLTDQEAARELEYLGRI-KHPNLVPLTGYCIAG--DQRI 580 (815)
Q Consensus 507 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~--~~~~ 580 (815)
.++|++.+.||+|+||.||+|... ++..||||++... .......+.+|+.+++++ +||||+++++++... ...+
T Consensus 6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~ 85 (337)
T cd07852 6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIY 85 (337)
T ss_pred hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEE
Confidence 467888999999999999999964 6889999988542 222345677899999999 999999999998654 3679
Q ss_pred EEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeee
Q 003504 581 AIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIH 660 (815)
Q Consensus 581 lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivH 660 (815)
+||||++ ++|.+++.. . .++|..+..++.|++.||+||| +.+|+|
T Consensus 86 lv~e~~~-~~L~~~~~~------------------------------~-~~~~~~~~~i~~qi~~~L~~LH---~~~i~H 130 (337)
T cd07852 86 LVFEYME-TDLHAVIRA------------------------------N-ILEDVHKRYIMYQLLKALKYIH---SGNVIH 130 (337)
T ss_pred EEecccc-cCHHHHHhc------------------------------C-CCCHHHHHHHHHHHHHHHHHHH---HCCeec
Confidence 9999998 599888853 1 5678888999999999999999 889999
Q ss_pred ccCCCCceEEcCCCCeeecccccceecCCCC------ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhC
Q 003504 661 RDIKASSVYLDMNLEPRLSDFGLAKIFGNGL------DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITG 734 (815)
Q Consensus 661 rDlk~~NIll~~~~~~kl~Dfgla~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg 734 (815)
|||||+||+++.++.+||+|||+++...... ......|+..|+|||.+.+... .+.++||||||+++|||++|
T Consensus 131 ~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~sDi~slG~~l~el~tg 209 (337)
T cd07852 131 RDLKPSNILLNSDCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTR-YTKGVDMWSVGCILGEMLLG 209 (337)
T ss_pred CCCCHHHEEEcCCCcEEEeeccchhccccccccccCcchhcccccccccCceeeecccc-ccccchHHHHHHHHHHHHhC
Confidence 9999999999999999999999998664322 1123458899999998765432 57899999999999999999
Q ss_pred CCCCCCCCCccccccHHHHHH-------HHHhcCCCCcccc----cccc--CCCCHHHHHHHHHHHhhccccCCCCCCCH
Q 003504 735 KKPLGDDYPEEKEGNLVSWVR-------GLVRNNKGSRAID----PKIR--DTGPEKQMEEALKIGYLCTADLPLKRPSM 801 (815)
Q Consensus 735 ~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~----~~~~--~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~ 801 (815)
+.||......+....+..... ..+........++ .... .......+.++.+++.+||+.+|++||++
T Consensus 210 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~ 289 (337)
T cd07852 210 KPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTA 289 (337)
T ss_pred CCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCH
Confidence 999975433221111111000 0000000000000 0000 00011246788999999999999999999
Q ss_pred HHHHHH
Q 003504 802 QQIVGL 807 (815)
Q Consensus 802 ~~v~~~ 807 (815)
.++++.
T Consensus 290 ~~il~~ 295 (337)
T cd07852 290 EEALEH 295 (337)
T ss_pred HHHhhC
Confidence 999864
No 335
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=6.5e-34 Score=302.02 Aligned_cols=243 Identities=22% Similarity=0.362 Sum_probs=194.8
Q ss_pred CCeecccCCeeeEEEEc-CCCcEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeCCCCCh
Q 003504 513 GTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNL 591 (815)
Q Consensus 513 ~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL 591 (815)
...||+|+||.||+|.. .++..||||.+..........+.+|+.+++.++||||+++++++...+..++||||+++++|
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 104 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 104 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcH
Confidence 35799999999999986 57889999998654445566789999999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCceEEc
Q 003504 592 QNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLD 671 (815)
Q Consensus 592 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NIll~ 671 (815)
.+++.. ..+++.....++.|++.||+||| +.+++||||+|+||+++
T Consensus 105 ~~~~~~-------------------------------~~~~~~~~~~~~~ql~~~l~~lH---~~givH~dl~p~Nilv~ 150 (292)
T cd06657 105 TDIVTH-------------------------------TRMNEEQIAAVCLAVLKALSVLH---AQGVIHRDIKSDSILLT 150 (292)
T ss_pred HHHHhc-------------------------------CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEC
Confidence 998743 13577888999999999999999 78999999999999999
Q ss_pred CCCCeeecccccceecCCCC-ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCccccccH
Q 003504 672 MNLEPRLSDFGLAKIFGNGL-DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNL 750 (815)
Q Consensus 672 ~~~~~kl~Dfgla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~ 750 (815)
.++.++|+|||++....... ......|+..|+|||.+.... ++.++|||||||++||+++|+.||......
T Consensus 151 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~--~~~~~Dv~slGvil~el~tg~~p~~~~~~~------ 222 (292)
T cd06657 151 HDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLP--YGPEVDIWSLGIMVIEMVDGEPPYFNEPPL------ 222 (292)
T ss_pred CCCCEEEcccccceecccccccccccccCccccCHHHhcCCC--CCchhhHHHHHHHHHHHHhCCCCCCCCCHH------
Confidence 99999999999987654332 223345889999999887655 688999999999999999999998742211
Q ss_pred HHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 751 VSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 751 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
...... ... ..+.+. .....+..+.+++.+||..+|.+||++.++++
T Consensus 223 -~~~~~~-~~~-----~~~~~~--~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 223 -KAMKMI-RDN-----LPPKLK--NLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred -HHHHHH-Hhh-----CCcccC--CcccCCHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence 111111 111 011111 11223456789999999999999999999986
No 336
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=1.7e-33 Score=299.20 Aligned_cols=254 Identities=16% Similarity=0.186 Sum_probs=182.1
Q ss_pred cCCCCCCeecccCCeeeEEEEcCC----CcEEEEEEeecCCccc--H---------HHHHHHHHHhcCCCCCCceeeeeE
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFLPG----GIHVAVKVLVHGSTLT--D---------QEAARELEYLGRIKHPNLVPLTGY 572 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~~~----~~~vavK~l~~~~~~~--~---------~~~~~E~~~l~~l~H~niv~l~g~ 572 (815)
.+|.+.+.||+|+||.||+|...+ +..+|+|......... + .....+...+..++|+|+++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 578889999999999999999654 3456777543221111 1 112234455677899999999998
Q ss_pred EEeCC----eeEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHH
Q 003504 573 CIAGD----QRIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALA 648 (815)
Q Consensus 573 ~~~~~----~~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~ 648 (815)
+.... ..++++|++.. ++.+.+... ...++.....|+.|++.||+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~------------------------------~~~~~~~~~~i~~qi~~~l~ 140 (294)
T PHA02882 92 GSFKRCRMYYRFILLEKLVE-NTKEIFKRI------------------------------KCKNKKLIKNIMKDMLTTLE 140 (294)
T ss_pred eeEecCCceEEEEEEehhcc-CHHHHHHhh------------------------------ccCCHHHHHHHHHHHHHHHH
Confidence 76543 34677777654 565555431 12356777899999999999
Q ss_pred HHhcCCCCCeeeccCCCCceEEcCCCCeeecccccceecCCCC--------ccccccccccccCCcccCCCCCCCCCcCc
Q 003504 649 FLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGL--------DEEIARGSPGYIPPEFAQPDSDFPTPKSD 720 (815)
Q Consensus 649 yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~~D 720 (815)
||| +.+|+||||||+|||++.++.++|+|||+|+.+.... ......||+.|+|||...+.. ++.++|
T Consensus 141 ~lH---~~~iiHrDiKp~Nill~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~--~~~~~D 215 (294)
T PHA02882 141 YIH---EHGISHGDIKPENIMVDGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGAC--VTRRGD 215 (294)
T ss_pred HHH---hCCeecCCCCHHHEEEcCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCC--CCcHHH
Confidence 999 8899999999999999999999999999998764211 122346999999999987766 789999
Q ss_pred chhHHHHHHHHHhCCCCCCCCCCccccc--cHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCC
Q 003504 721 VYCYGVVLLELITGKKPLGDDYPEEKEG--NLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKR 798 (815)
Q Consensus 721 v~S~Gvvl~el~tg~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~R 798 (815)
||||||++|||++|+.||.......... ...++...... +... ...++.++.+++..||..+|++|
T Consensus 216 iwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~---~~~~~~~~~~~~~~~~~~~~~~r 283 (294)
T PHA02882 216 LESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCDFIKRLHE---------GKIK---IKNANKFIYDFIECVTKLSYEEK 283 (294)
T ss_pred HHHHHHHHHHHHhCCCCCCccccchHHHHHhHHHHHHHhhh---------hhhc---cCCCCHHHHHHHHHHHhCCCCCC
Confidence 9999999999999999997642211100 00111111111 1111 22345779999999999999999
Q ss_pred CCHHHHHHHHH
Q 003504 799 PSMQQIVGLLK 809 (815)
Q Consensus 799 Ps~~~v~~~L~ 809 (815)
|++.++.+.++
T Consensus 284 p~~~~l~~~~~ 294 (294)
T PHA02882 284 PDYDALIKIFD 294 (294)
T ss_pred CCHHHHHHhhC
Confidence 99999998763
No 337
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=2.4e-33 Score=293.51 Aligned_cols=247 Identities=21% Similarity=0.321 Sum_probs=195.0
Q ss_pred cCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCC-----cccHHHHHHHHHHhcCCCCCCceeeeeEEEeC--Cee
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGS-----TLTDQEAARELEYLGRIKHPNLVPLTGYCIAG--DQR 579 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~-----~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~ 579 (815)
.+|.+.+.||+|+||.||+|.. .++..||+|.+.... ......+.+|++++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 4688899999999999999995 568899999875321 12235788999999999999999999998764 357
Q ss_pred EEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCee
Q 003504 580 IAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPII 659 (815)
Q Consensus 580 ~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~iv 659 (815)
++|+||+++++|.+++... ..+++....+++.|++.||.||| +.+++
T Consensus 82 ~~v~e~~~~~~L~~~~~~~------------------------------~~l~~~~~~~~~~~i~~al~~LH---~~~i~ 128 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAY------------------------------GALTENVTRRYTRQILQGVSYLH---SNMIV 128 (264)
T ss_pred EEEEEeCCCCcHHHHHHHc------------------------------CCCCHHHHHHHHHHHHHHHHHHH---hCCEe
Confidence 8999999999999998642 24677888899999999999999 88999
Q ss_pred eccCCCCceEEcCCCCeeecccccceecCCC----CccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCC
Q 003504 660 HRDIKASSVYLDMNLEPRLSDFGLAKIFGNG----LDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735 (815)
Q Consensus 660 HrDlk~~NIll~~~~~~kl~Dfgla~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~ 735 (815)
||||||+||+++.++.++|+|||+++..... .......|+..|+|||.+.+.. ++.++|||||||++||+++|+
T Consensus 129 H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~Di~slG~il~~l~~g~ 206 (264)
T cd06653 129 HRDIKGANILRDSAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEG--YGRKADVWSVACTVVEMLTEK 206 (264)
T ss_pred cCCCCHHHEEEcCCCCEEECccccccccccccccCccccccCCcccccCHhhhcCCC--CCccccHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999865321 1122345889999999987755 688999999999999999999
Q ss_pred CCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 736 KPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 736 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
.||.+.... .. +...... ......+.....++.+++.+||. +|..||++.+++.
T Consensus 207 ~p~~~~~~~------~~-~~~~~~~---------~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 207 PPWAEYEAM------AA-IFKIATQ---------PTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred CCCCccCHH------HH-HHHHHcC---------CCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 999753211 11 1111110 11112244566789999999999 5799999998765
No 338
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=2.4e-33 Score=291.54 Aligned_cols=246 Identities=28% Similarity=0.452 Sum_probs=200.9
Q ss_pred CCCCCCeecccCCeeeEEEEcC-CCcEEEEEEeecCCc--ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEe
Q 003504 509 NFDRGTLLAEGKFGPVYRGFLP-GGIHVAVKVLVHGST--LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDY 585 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 585 (815)
+|+..+.||+|++|.||+|+.. ++..||+|.+..... .....+.+|++++++++|||++++++++.+....++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 4777899999999999999854 678999999876543 3456789999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCC
Q 003504 586 MENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKA 665 (815)
Q Consensus 586 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~ 665 (815)
+++++|.+++.. ...+++..+..++.|++.||.||| +.+++||||+|
T Consensus 81 ~~~~~L~~~~~~------------------------------~~~l~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p 127 (254)
T cd06627 81 AENGSLRQIIKK------------------------------FGPFPESLVAVYVYQVLQGLAYLH---EQGVIHRDIKA 127 (254)
T ss_pred CCCCcHHHHHHh------------------------------ccCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCH
Confidence 999999999864 235789999999999999999999 88999999999
Q ss_pred CceEEcCCCCeeecccccceecCCCCc-cccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCc
Q 003504 666 SSVYLDMNLEPRLSDFGLAKIFGNGLD-EEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPE 744 (815)
Q Consensus 666 ~NIll~~~~~~kl~Dfgla~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~ 744 (815)
+||+++.++.+||+|||.+........ .....++..|+|||...+.. ++.++||||+|+++||+++|+.||.....
T Consensus 128 ~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~--~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~- 204 (254)
T cd06627 128 ANILTTKDGVVKLADFGVATKLNDVSKDDASVVGTPYWMAPEVIEMSG--ASTASDIWSLGCTVIELLTGNPPYYDLNP- 204 (254)
T ss_pred HHEEECCCCCEEEeccccceecCCCcccccccccchhhcCHhhhcCCC--CCcchhHHHHHHHHHHHHhCCCCCCCccH-
Confidence 999999999999999999987754332 23345888999999887655 68899999999999999999999874221
Q ss_pred cccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 745 EKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
...... .. ... ....+...+.++.+++.+||..+|++||++.+++.
T Consensus 205 -----~~~~~~-~~-~~~---------~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 205 -----MAALFR-IV-QDD---------HPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred -----HHHHHH-Hh-ccC---------CCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 111111 11 000 01113344667889999999999999999999874
No 339
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=1.8e-33 Score=302.78 Aligned_cols=268 Identities=19% Similarity=0.250 Sum_probs=195.6
Q ss_pred CCCCCCeecccCCeeeEEEEcC---CCcEEEEEEeecCC---cccHHHHHHHHHHhcCCCCCCceeeeeEEEeC--CeeE
Q 003504 509 NFDRGTLLAEGKFGPVYRGFLP---GGIHVAVKVLVHGS---TLTDQEAARELEYLGRIKHPNLVPLTGYCIAG--DQRI 580 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~~---~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~ 580 (815)
+|++.+.||+|+||.||+|+.. ++..||+|.+.... ......+.+|+.++.+++||||+++++++.+. ...+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 3677889999999999999964 47899999987632 23345678899999999999999999999988 7899
Q ss_pred EEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeee
Q 003504 581 AIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIH 660 (815)
Q Consensus 581 lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivH 660 (815)
+||||+++ +|.+++..... .....++......++.|++.||+||| +.+|+|
T Consensus 81 lv~e~~~~-~l~~~~~~~~~-------------------------~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~h 131 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQ-------------------------AKRVSIPPSMVKSLLWQILNGVHYLH---SNWVLH 131 (316)
T ss_pred EEEeCCCc-CHHHHHHhhcc-------------------------CCCcCcCHHHHHHHHHHHHHHHHHHH---hCCEee
Confidence 99999986 77777653210 11235677888999999999999999 889999
Q ss_pred ccCCCCceEEcC----CCCeeecccccceecCCCC----ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHH
Q 003504 661 RDIKASSVYLDM----NLEPRLSDFGLAKIFGNGL----DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELI 732 (815)
Q Consensus 661 rDlk~~NIll~~----~~~~kl~Dfgla~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~ 732 (815)
|||||+||+++. ++.+||+|||+++...... ......++..|+|||.+.+... ++.++|||||||++|||+
T Consensus 132 ~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~~Dv~slG~~l~~l~ 210 (316)
T cd07842 132 RDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARH-YTKAIDIWAIGCIFAELL 210 (316)
T ss_pred CCCCHHHEEEcCCCCccceEEECCCccccccCCCcccccccCCccccccccCHHHHhCCCC-CCcHHHHHHHHHHHHHHH
Confidence 999999999999 8999999999998764322 1233457889999998765432 578999999999999999
Q ss_pred hCCCCCCCCCCcccc------ccHHHHHHHHHh-----------cCCCCc----cccccccCCCC-------HHHHHHHH
Q 003504 733 TGKKPLGDDYPEEKE------GNLVSWVRGLVR-----------NNKGSR----AIDPKIRDTGP-------EKQMEEAL 784 (815)
Q Consensus 733 tg~~p~~~~~~~~~~------~~~~~~~~~~~~-----------~~~~~~----~~~~~~~~~~~-------~~~~~~~~ 784 (815)
+|+.||......... ..+...+..+-. ...... ........... .....++.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (316)
T cd07842 211 TLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGF 290 (316)
T ss_pred hcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHH
Confidence 999999864332200 011111110000 000000 00000000000 02345789
Q ss_pred HHHhhccccCCCCCCCHHHHHH
Q 003504 785 KIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 785 ~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
+++.+|++.||++|||+.++++
T Consensus 291 ~~i~~~l~~~P~~Rps~~eil~ 312 (316)
T cd07842 291 DLLRKLLEYDPTKRITAEEALE 312 (316)
T ss_pred HHHHHHhcCCcccCcCHHHHhc
Confidence 9999999999999999999975
No 340
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=9.4e-34 Score=307.15 Aligned_cols=262 Identities=21% Similarity=0.275 Sum_probs=196.1
Q ss_pred hcCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCc--ccHHHHHHHHHHhcCCCCCCceeeeeEEEe----CCee
Q 003504 507 TSNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGST--LTDQEAARELEYLGRIKHPNLVPLTGYCIA----GDQR 579 (815)
Q Consensus 507 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~----~~~~ 579 (815)
.++|+..+.||+|+||.||+|.. .++..||+|++..... ...+.+.+|+.++.+++||||+++++++.. ....
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 36788899999999999999994 5689999999875322 334567889999999999999999998764 3467
Q ss_pred EEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCee
Q 003504 580 IAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPII 659 (815)
Q Consensus 580 ~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~iv 659 (815)
++|+||+. |+|.+++.. ...+++.....++.|++.||+||| ..+|+
T Consensus 84 ~lv~e~~~-~~l~~~~~~------------------------------~~~~~~~~~~~i~~qi~~aL~~LH---~~~iv 129 (334)
T cd07855 84 YVVMDLME-SDLHHIIHS------------------------------DQPLTEEHIRYFLYQLLRGLKYIH---SANVI 129 (334)
T ss_pred EEEEehhh-hhHHHHhcc------------------------------CCCCCHHHHHHHHHHHHHHHHHHH---HCCee
Confidence 89999996 589888864 234788899999999999999999 78999
Q ss_pred eccCCCCceEEcCCCCeeecccccceecCCCCc-----cccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhC
Q 003504 660 HRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLD-----EEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITG 734 (815)
Q Consensus 660 HrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg 734 (815)
||||||+||++++++.+||+|||+++....... .....|+..|+|||.+..... ++.++|||||||++|||++|
T Consensus 130 H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~-~~~~~Di~slG~~l~el~~g 208 (334)
T cd07855 130 HRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPE-YTTAIDMWSVGCIFAEMLGR 208 (334)
T ss_pred cCCCCHHHEEEcCCCcEEecccccceeecccCcCCCcccccccccccccChHHhcCCcc-cccccchHHHHHHHHHHHcC
Confidence 999999999999999999999999986643221 123468889999998765332 68899999999999999999
Q ss_pred CCCCCCCCCccccccHHH----------------HHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCC
Q 003504 735 KKPLGDDYPEEKEGNLVS----------------WVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKR 798 (815)
Q Consensus 735 ~~p~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~R 798 (815)
+.||...........+.. ............. +... .......+.++.+++.+||+.+|++|
T Consensus 209 ~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~li~~~l~~~P~~R 285 (334)
T cd07855 209 RQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQ--PVPW-SKIFPKASPEALDLLSQMLQFDPEER 285 (334)
T ss_pred CCccCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCC--CCCH-HHHcccCCHHHHHHHHHHccCChhhC
Confidence 999975432111000000 0000000000000 0000 00012346789999999999999999
Q ss_pred CCHHHHHH
Q 003504 799 PSMQQIVG 806 (815)
Q Consensus 799 Ps~~~v~~ 806 (815)
|++++++.
T Consensus 286 pt~~~~l~ 293 (334)
T cd07855 286 ITVEQALQ 293 (334)
T ss_pred cCHHHHHh
Confidence 99999876
No 341
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=9.7e-34 Score=307.31 Aligned_cols=261 Identities=21% Similarity=0.288 Sum_probs=193.8
Q ss_pred hcCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCC-cccHHHHHHHHHHhcCCCCCCceeeeeEEEeCC-----ee
Q 003504 507 TSNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGS-TLTDQEAARELEYLGRIKHPNLVPLTGYCIAGD-----QR 579 (815)
Q Consensus 507 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~-----~~ 579 (815)
+++|++.+.||+|+||.||+|+. .+|..||||.+.... ......+.+|+.++++++||||+++++++.... ..
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 46789999999999999999984 578999999986422 223456788999999999999999999876543 57
Q ss_pred EEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCee
Q 003504 580 IAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPII 659 (815)
Q Consensus 580 ~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~iv 659 (815)
++|+||+++ +|.+++.. ..+++.....++.|++.||+||| +.+|+
T Consensus 84 ~lv~e~~~~-~l~~~~~~-------------------------------~~l~~~~~~~i~~ql~~aL~~LH---~~~iv 128 (336)
T cd07849 84 YIVQELMET-DLYKLIKT-------------------------------QHLSNDHIQYFLYQILRGLKYIH---SANVL 128 (336)
T ss_pred EEEehhccc-CHHHHHhc-------------------------------CCCCHHHHHHHHHHHHHHHHHHH---hCCee
Confidence 899999975 88777743 24778888999999999999999 88999
Q ss_pred eccCCCCceEEcCCCCeeecccccceecCCCCc----cccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCC
Q 003504 660 HRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLD----EEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735 (815)
Q Consensus 660 HrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~ 735 (815)
||||||+||+++.++.+||+|||+++....... .....|+..|+|||.+.+... ++.++|||||||++|||++|+
T Consensus 129 H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~~DvwslGvil~el~~G~ 207 (336)
T cd07849 129 HRDLKPSNLLLNTNCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKG-YTKAIDIWSVGCILAEMLSNR 207 (336)
T ss_pred ccCCCHHHEEECCCCCEEECcccceeeccccccccCCcCCcCcCCCccChHHhhCCCC-CCcHHHHHHHHHHHHHHHhCC
Confidence 999999999999999999999999987643221 123458899999998755332 688999999999999999999
Q ss_pred CCCCCCCCccccccHHHHHHHHHhcCC---CCcccccc-------c--cCC-----CCHHHHHHHHHHHhhccccCCCCC
Q 003504 736 KPLGDDYPEEKEGNLVSWVRGLVRNNK---GSRAIDPK-------I--RDT-----GPEKQMEEALKIGYLCTADLPLKR 798 (815)
Q Consensus 736 ~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-------~--~~~-----~~~~~~~~~~~l~~~Cl~~dP~~R 798 (815)
.||.+..... ....+...+.... ...+.+.. . ... .....+.++.+++.+||+.+|++|
T Consensus 208 ~~f~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R 283 (336)
T cd07849 208 PLFPGKDYLH----QLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKR 283 (336)
T ss_pred CCCCCCCHHH----HHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhC
Confidence 9997532111 0111110000000 00000000 0 000 011235678999999999999999
Q ss_pred CCHHHHHHH
Q 003504 799 PSMQQIVGL 807 (815)
Q Consensus 799 Ps~~~v~~~ 807 (815)
|++.++++.
T Consensus 284 pt~~e~l~h 292 (336)
T cd07849 284 ITVEEALAH 292 (336)
T ss_pred cCHHHHhcC
Confidence 999999864
No 342
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=2.3e-33 Score=292.21 Aligned_cols=250 Identities=24% Similarity=0.366 Sum_probs=203.2
Q ss_pred CCCCCCeecccCCeeeEEEEcC-CCcEEEEEEeecCCc--ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEe
Q 003504 509 NFDRGTLLAEGKFGPVYRGFLP-GGIHVAVKVLVHGST--LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDY 585 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 585 (815)
+|+..+.||+|+||.||+|... ++..||+|++..... ...+.+.+|++++++++|||++++.+.+...+..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 4777889999999999999964 688999999875433 4456788999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCC
Q 003504 586 MENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKA 665 (815)
Q Consensus 586 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~ 665 (815)
+++++|.+++.... .....+++.....++.+++.||+||| +.+++|+||+|
T Consensus 81 ~~~~~L~~~l~~~~--------------------------~~~~~~~~~~~~~i~~~i~~~l~~lh---~~~~~H~dl~~ 131 (258)
T cd08215 81 ADGGDLSQKIKKQK--------------------------KEGKPFPEEQILDWFVQLCLALKYLH---SRKILHRDIKP 131 (258)
T ss_pred cCCCcHHHHHHHhh--------------------------ccCCCcCHHHHHHHHHHHHHHHHHHH---hCCEecccCCh
Confidence 99999999997531 11356889999999999999999999 78999999999
Q ss_pred CceEEcCCCCeeecccccceecCCCC-ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCc
Q 003504 666 SSVYLDMNLEPRLSDFGLAKIFGNGL-DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPE 744 (815)
Q Consensus 666 ~NIll~~~~~~kl~Dfgla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~ 744 (815)
+||+++.++.++|+|||.+....... ......|++.|+|||...... ++.++||||+|+++|++++|+.||.....
T Consensus 132 ~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~--~~~~~Dv~slG~~~~~l~~g~~p~~~~~~- 208 (258)
T cd08215 132 QNIFLTSNGLVKLGDFGISKVLSSTVDLAKTVVGTPYYLSPELCQNKP--YNYKSDIWSLGCVLYELCTLKHPFEGENL- 208 (258)
T ss_pred HHeEEcCCCcEEECCccceeecccCcceecceeeeecccChhHhccCC--CCccccHHHHHHHHHHHHcCCCCCCCCcH-
Confidence 99999999999999999998765443 223346888999999887665 68899999999999999999999864321
Q ss_pred cccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 745 EKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
........... ....+...+.++.+++.+||..+|++||++.++++
T Consensus 209 ------~~~~~~~~~~~----------~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 209 ------LELALKILKGQ----------YPPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred ------HHHHHHHhcCC----------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 12222221111 01112245567899999999999999999999975
No 343
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=1.2e-33 Score=299.76 Aligned_cols=255 Identities=26% Similarity=0.272 Sum_probs=199.3
Q ss_pred CCCCCCeecccCCeeeEEEEc----CCCcEEEEEEeecCCc----ccHHHHHHHHHHhcCC-CCCCceeeeeEEEeCCee
Q 003504 509 NFDRGTLLAEGKFGPVYRGFL----PGGIHVAVKVLVHGST----LTDQEAARELEYLGRI-KHPNLVPLTGYCIAGDQR 579 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~----~~~~~vavK~l~~~~~----~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~ 579 (815)
+|++.+.||+|+||.||+|+. .++..||||.++.... ...+.+.+|++++.++ +||||+++++++......
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 367788999999999999984 3578899999875322 2235678999999999 599999999999988899
Q ss_pred EEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCee
Q 003504 580 IAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPII 659 (815)
Q Consensus 580 ~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~iv 659 (815)
++||||+++|+|.+++.. ...+++.....++.|+++||+||| ..+++
T Consensus 81 ~lv~e~~~~~~L~~~~~~------------------------------~~~~~~~~~~~~~~ql~~~l~~lH---~~~~~ 127 (288)
T cd05583 81 HLILDYVNGGELFTHLYQ------------------------------REHFTESEVRVYIAEIVLALDHLH---QLGII 127 (288)
T ss_pred EEEEecCCCCcHHHHHhh------------------------------cCCcCHHHHHHHHHHHHHHHHHHH---HCCee
Confidence 999999999999999864 224677888899999999999999 78999
Q ss_pred eccCCCCceEEcCCCCeeecccccceecCCCCc--cccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCC
Q 003504 660 HRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLD--EEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKP 737 (815)
Q Consensus 660 HrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p 737 (815)
||||+|+||+++.++.++|+|||+++....... .....|+..|+|||.+.+.....+.++||||||+++|||++|+.|
T Consensus 128 H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p 207 (288)
T cd05583 128 YRDIKLENILLDSEGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASP 207 (288)
T ss_pred ccCCCHHHeEECCCCCEEEEECccccccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCC
Confidence 999999999999999999999999886543321 223458899999999876543367899999999999999999999
Q ss_pred CCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHh
Q 003504 738 LGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKD 810 (815)
Q Consensus 738 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~ 810 (815)
|....... ......+...... + ..+......+.+++.+||+.+|++|||+.++.+.|+.
T Consensus 208 ~~~~~~~~---~~~~~~~~~~~~~-------~----~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 208 FTVDGEQN---SQSEISRRILKSK-------P----PFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred cccCcccc---hHHHHHHHHHccC-------C----CCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence 96422111 1111122221110 1 1133345678899999999999999999888777653
No 344
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-34 Score=273.91 Aligned_cols=249 Identities=21% Similarity=0.314 Sum_probs=194.7
Q ss_pred CCeecccCCeeeEEEEcC-CCcEEEEEEeecCC-cccHHHHHHHHHHhcCC-CCCCceeeeeEEEeCCeeEEEEEeCCCC
Q 003504 513 GTLLAEGKFGPVYRGFLP-GGIHVAVKVLVHGS-TLTDQEAARELEYLGRI-KHPNLVPLTGYCIAGDQRIAIYDYMENG 589 (815)
Q Consensus 513 ~~~ig~G~~g~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ey~~~g 589 (815)
...||.|.-|.|++++.. +|..+|||.+++.. ..+.+.+.+.++++.+- +.|+||+.+|||......++-||.|..
T Consensus 97 l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs~- 175 (391)
T KOG0983|consen 97 LGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMST- 175 (391)
T ss_pred HHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHHH-
Confidence 457999999999999964 58899999997643 33445677788877665 489999999999999999999998865
Q ss_pred ChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCceE
Q 003504 590 NLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVY 669 (815)
Q Consensus 590 sL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NIl 669 (815)
.+..+++.- ..++.....=++...+..||.||.+ .++|+|||+||+|||
T Consensus 176 C~ekLlkri-----------------------------k~piPE~ilGk~tva~v~AL~YLKe--KH~viHRDvKPSNIL 224 (391)
T KOG0983|consen 176 CAEKLLKRI-----------------------------KGPIPERILGKMTVAIVKALYYLKE--KHGVIHRDVKPSNIL 224 (391)
T ss_pred HHHHHHHHh-----------------------------cCCchHHhhhhhHHHHHHHHHHHHH--hcceeecccCccceE
Confidence 556666532 2234444455778889999999986 789999999999999
Q ss_pred EcCCCCeeecccccceecCCCCccccccccccccCCcccCCC-CCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCccccc
Q 003504 670 LDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPD-SDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEG 748 (815)
Q Consensus 670 l~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~ 748 (815)
+|+.|++|++|||.+..+.........+|.+.|||||-+-.. ...|+.++||||||+.++||.||+.||.+...+
T Consensus 225 lDe~GniKlCDFGIsGrlvdSkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~td---- 300 (391)
T KOG0983|consen 225 LDERGNIKLCDFGISGRLVDSKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTD---- 300 (391)
T ss_pred EccCCCEEeecccccceeecccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCcc----
Confidence 999999999999999888766666677899999999988765 344789999999999999999999999863321
Q ss_pred cHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003504 749 NLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGL 807 (815)
Q Consensus 749 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~ 807 (815)
.+.+...+.++ .|.+... ...+..+.+++..|+.+|+.+||...++++.
T Consensus 301 --Fe~ltkvln~e------PP~L~~~--~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 301 --FEVLTKVLNEE------PPLLPGH--MGFSPDFQSFVKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred --HHHHHHHHhcC------CCCCCcc--cCcCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence 11222333322 2333321 2267789999999999999999999988753
No 345
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=6.9e-33 Score=290.29 Aligned_cols=249 Identities=25% Similarity=0.264 Sum_probs=191.7
Q ss_pred HHHHHHhcCCCCCCee--cccCCeeeEEEEc-CCCcEEEEEEeecCCcccHHHHHHHHHHhcCC-CCCCceeeeeEEEeC
Q 003504 501 ADLLSATSNFDRGTLL--AEGKFGPVYRGFL-PGGIHVAVKVLVHGSTLTDQEAARELEYLGRI-KHPNLVPLTGYCIAG 576 (815)
Q Consensus 501 ~~l~~~~~~~~~~~~i--g~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~ 576 (815)
.+.....++|++.+.+ |+|+||.||+++. .++..+|+|.+....... . |+.....+ +||||+++++++...
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~---~--e~~~~~~~~~h~~iv~~~~~~~~~ 81 (267)
T PHA03390 7 SELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA---I--EPMVHQLMKDNPNFIKLYYSVTTL 81 (267)
T ss_pred HHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch---h--hHHHHHHhhcCCCEEEEEEEEecC
Confidence 4444455677777776 9999999999994 568889999986532111 1 22222212 699999999999999
Q ss_pred CeeEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCC
Q 003504 577 DQRIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSP 656 (815)
Q Consensus 577 ~~~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~ 656 (815)
+..++||||+++|+|.+++.. ...++|.....++.|+++||+||| +.
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~------------------------------~~~l~~~~~~~~~~qi~~~l~~lH---~~ 128 (267)
T PHA03390 82 KGHVLIMDYIKDGDLFDLLKK------------------------------EGKLSEAEVKKIIRQLVEALNDLH---KH 128 (267)
T ss_pred CeeEEEEEcCCCCcHHHHHHh------------------------------cCCCCHHHHHHHHHHHHHHHHHHH---hC
Confidence 999999999999999999964 226789999999999999999999 88
Q ss_pred CeeeccCCCCceEEcCCC-CeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCC
Q 003504 657 PIIHRDIKASSVYLDMNL-EPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735 (815)
Q Consensus 657 ~ivHrDlk~~NIll~~~~-~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~ 735 (815)
+++||||||+||+++.++ .++|+|||+++..... ....|+..|+|||++.+.. ++.++|||||||++||+++|+
T Consensus 129 ~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~--~~~~~DvwslG~il~~l~~g~ 203 (267)
T PHA03390 129 NIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTP---SCYDGTLDYFSPEKIKGHN--YDVSFDWWAVGVLTYELLTGK 203 (267)
T ss_pred CeeeCCCCHHHEEEeCCCCeEEEecCccceecCCC---ccCCCCCcccChhhhcCCC--CCchhhHHHHHHHHHHHHHCC
Confidence 999999999999999998 9999999999876432 2345889999999987665 688999999999999999999
Q ss_pred CCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCC-HHHHHH
Q 003504 736 KPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPS-MQQIVG 806 (815)
Q Consensus 736 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs-~~~v~~ 806 (815)
.||.....++. ....+.... .. ....+...+..+.+++.+||+.+|.+||+ ++++++
T Consensus 204 ~p~~~~~~~~~--~~~~~~~~~-~~-----------~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 204 HPFKEDEDEEL--DLESLLKRQ-QK-----------KLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred CCCCCCCcchh--hHHHHHHhh-cc-----------cCCcccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 99975332221 122222111 00 00112345677899999999999999995 688874
No 346
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=1.5e-33 Score=305.82 Aligned_cols=263 Identities=21% Similarity=0.280 Sum_probs=194.2
Q ss_pred cCCC-CCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCccc--------------HHHHHHHHHHhcCCCCCCceeeee
Q 003504 508 SNFD-RGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGSTLT--------------DQEAARELEYLGRIKHPNLVPLTG 571 (815)
Q Consensus 508 ~~~~-~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~--------------~~~~~~E~~~l~~l~H~niv~l~g 571 (815)
++|. +.+.||+|+||.||+|.. .+++.||||.+....... ...+.+|++++.+++||||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 3454 457899999999999994 468999999986532211 124778999999999999999999
Q ss_pred EEEeCCeeEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHh
Q 003504 572 YCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLH 651 (815)
Q Consensus 572 ~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH 651 (815)
++...+..++||||++ |+|.+++.. ...+++.....++.|++.||+|||
T Consensus 88 ~~~~~~~~~lv~e~~~-~~l~~~l~~------------------------------~~~~~~~~~~~~~~ql~~aL~~LH 136 (335)
T PTZ00024 88 VYVEGDFINLVMDIMA-SDLKKVVDR------------------------------KIRLTESQVKCILLQILNGLNVLH 136 (335)
T ss_pred EEecCCcEEEEEeccc-cCHHHHHHh------------------------------cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999997 589988853 224677888999999999999999
Q ss_pred cCCCCCeeeccCCCCceEEcCCCCeeecccccceecCCC---------------CccccccccccccCCcccCCCCCCCC
Q 003504 652 HGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNG---------------LDEEIARGSPGYIPPEFAQPDSDFPT 716 (815)
Q Consensus 652 ~~~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~---------------~~~~~~~gt~~y~aPE~~~~~~~~~~ 716 (815)
+.+++||||+|+||+++.++.+||+|||.++..... .......++..|+|||.+.+... ++
T Consensus 137 ---~~~i~H~dl~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~ 212 (335)
T PTZ00024 137 ---KWYFMHRDLSPANIFINSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEK-YH 212 (335)
T ss_pred ---hCCeecccccHHHeEECCCCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCC-CC
Confidence 899999999999999999999999999999866511 11122346788999999875432 58
Q ss_pred CcCcchhHHHHHHHHHhCCCCCCCCCCccccccHHHHHHHHHhcCCCC-----------ccccccccCCCCHHHHHHHHH
Q 003504 717 PKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVRNNKGS-----------RAIDPKIRDTGPEKQMEEALK 785 (815)
Q Consensus 717 ~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~ 785 (815)
.++|||||||++|||++|+.||......+....+...........+.. ....+... ......+.++.+
T Consensus 213 ~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 291 (335)
T PTZ00024 213 FAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLK-TIFPNASDDAID 291 (335)
T ss_pred cHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHH-HhCcCCChHHHH
Confidence 899999999999999999999976443222111111110000000000 00000000 001223567889
Q ss_pred HHhhccccCCCCCCCHHHHHH
Q 003504 786 IGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 786 l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
++.+|++.+|++||+++|++.
T Consensus 292 li~~~l~~~P~~R~s~~~~l~ 312 (335)
T PTZ00024 292 LLQSLLKLNPLERISAKEALK 312 (335)
T ss_pred HHHHHcCCCchhccCHHHHhc
Confidence 999999999999999999985
No 347
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=2.3e-33 Score=292.94 Aligned_cols=243 Identities=21% Similarity=0.269 Sum_probs=186.8
Q ss_pred CeecccCCeeeEEEEc-CCCcEEEEEEeecCCccc---HHHHHHHHHHh-cCCCCCCceeeeeEEEeCCeeEEEEEeCCC
Q 003504 514 TLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGSTLT---DQEAARELEYL-GRIKHPNLVPLTGYCIAGDQRIAIYDYMEN 588 (815)
Q Consensus 514 ~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~---~~~~~~E~~~l-~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 588 (815)
+.||+|+||.||+|.. .+++.||||++....... ...+..|..++ ...+|||++++++++...+..++|+||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 5789999999999985 468899999986533211 12344455444 455899999999999999999999999999
Q ss_pred CChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCce
Q 003504 589 GNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSV 668 (815)
Q Consensus 589 gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NI 668 (815)
|+|.+++... ..+++....+++.|++.||.||| +.+++||||+|+||
T Consensus 82 ~~L~~~l~~~------------------------------~~~~~~~~~~i~~qi~~aL~~lH---~~~i~H~dl~p~ni 128 (260)
T cd05611 82 GDCASLIKTL------------------------------GGLPEDWAKQYIAEVVLGVEDLH---QRGIIHRDIKPENL 128 (260)
T ss_pred CCHHHHHHHc------------------------------CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHe
Confidence 9999999642 24677788899999999999999 78999999999999
Q ss_pred EEcCCCCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCccccc
Q 003504 669 YLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEG 748 (815)
Q Consensus 669 ll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~ 748 (815)
+++.++.+||+|||+++.... .....|+..|+|||.+.+.. ++.++||||||+++||+++|..||.......
T Consensus 129 l~~~~~~~~l~dfg~~~~~~~---~~~~~~~~~y~~pe~~~~~~--~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~--- 200 (260)
T cd05611 129 LIDQTGHLKLTDFGLSRNGLE---NKKFVGTPDYLAPETILGVG--DDKMSDWWSLGCVIFEFLFGYPPFHAETPDA--- 200 (260)
T ss_pred EECCCCcEEEeecccceeccc---cccCCCCcCccChhhhcCCC--CcchhhhHHHHHHHHHHHHCCCCCCCCCHHH---
Confidence 999999999999999886543 23345888999999987665 6889999999999999999999997532211
Q ss_pred cHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 003504 749 NLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLL 808 (815)
Q Consensus 749 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L 808 (815)
.......... .........++..+.+++.+||+.+|++||++.++.+.|
T Consensus 201 ----~~~~~~~~~~-------~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l 249 (260)
T cd05611 201 ----VFDNILSRRI-------NWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIK 249 (260)
T ss_pred ----HHHHHHhccc-------CCCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHH
Confidence 1111111110 011111223567789999999999999999776555443
No 348
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=1.1e-33 Score=296.15 Aligned_cols=240 Identities=25% Similarity=0.365 Sum_probs=192.6
Q ss_pred ecccCCeeeEEEEcC-CCcEEEEEEeecCCc---ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeCCCCCh
Q 003504 516 LAEGKFGPVYRGFLP-GGIHVAVKVLVHGST---LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNL 591 (815)
Q Consensus 516 ig~G~~g~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL 591 (815)
||+|+||.||+|+.. +|..||+|.+..... ...+.+.+|++++++++||||+++++++......++|+||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999975 489999999865433 2345788999999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCceEEc
Q 003504 592 QNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLD 671 (815)
Q Consensus 592 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NIll~ 671 (815)
.++++.. ..+++..+..++.|+++||+||| +.+++||||+|+||+++
T Consensus 81 ~~~l~~~------------------------------~~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~di~~~nil~~ 127 (265)
T cd05579 81 ASLLENV------------------------------GSLDEDVARIYIAEIVLALEYLH---SNGIIHRDLKPDNILID 127 (265)
T ss_pred HHHHHHc------------------------------CCCCHHHHHHHHHHHHHHHHHHH---HcCeecCCCCHHHeEEc
Confidence 9999652 25788899999999999999999 88999999999999999
Q ss_pred CCCCeeecccccceecCCCC---------ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCC
Q 003504 672 MNLEPRLSDFGLAKIFGNGL---------DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDY 742 (815)
Q Consensus 672 ~~~~~kl~Dfgla~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~ 742 (815)
.++.+||+|||++....... ......++..|+|||...... .+.++||||||+++||+++|+.||....
T Consensus 128 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~--~~~~~Dv~slG~~~~~l~~g~~p~~~~~ 205 (265)
T cd05579 128 SNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQG--HSKTVDWWSLGCILYEFLVGIPPFHGET 205 (265)
T ss_pred CCCCEEEEecccchhcccCcccccccccccccCcccCccccCHHHhcCCC--CCcchhhHHHHHHHHHHHhCCCCCCCCC
Confidence 99999999999987643321 122345788999999987665 6889999999999999999999997533
Q ss_pred CccccccHHHHHHHHHhcCCCCccccccccCCCCHH--HHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 003504 743 PEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEK--QMEEALKIGYLCTADLPLKRPSMQQIVGLL 808 (815)
Q Consensus 743 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L 808 (815)
.+ .......... . ..+.. .+..+.+++.+||+.+|++||++..+.+.|
T Consensus 206 ~~-------~~~~~~~~~~---------~--~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l 255 (265)
T cd05579 206 PE-------EIFQNILNGK---------I--EWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIK 255 (265)
T ss_pred HH-------HHHHHHhcCC---------c--CCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHh
Confidence 21 1111111110 0 01112 367889999999999999999996555544
No 349
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=1.5e-33 Score=298.38 Aligned_cols=262 Identities=21% Similarity=0.251 Sum_probs=198.6
Q ss_pred CCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCc--ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeC
Q 003504 510 FDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGST--LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYM 586 (815)
Q Consensus 510 ~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 586 (815)
|+..+.||+|++|.||+|.. .++..+|+|.+..... .....+.+|++++++++||||+++++++..+...++|+||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 55678999999999999996 4688999999865432 23567889999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCC
Q 003504 587 ENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKAS 666 (815)
Q Consensus 587 ~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~ 666 (815)
++ +|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+
T Consensus 81 ~~-~l~~~l~~~-----------------------------~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~p~ 127 (283)
T cd05118 81 DT-DLYKLIKDR-----------------------------QRGLPESLIKSYLYQLLQGLAFCH---SHGILHRDLKPE 127 (283)
T ss_pred CC-CHHHHHHhh-----------------------------cccCCHHHHHHHHHHHHHHHHHHH---HCCeeecCcCHH
Confidence 85 888888642 235788999999999999999999 889999999999
Q ss_pred ceEEcCCCCeeecccccceecCCCC-ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCcc
Q 003504 667 SVYLDMNLEPRLSDFGLAKIFGNGL-DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEE 745 (815)
Q Consensus 667 NIll~~~~~~kl~Dfgla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~ 745 (815)
||+++.++.+||+|||.+....... ......++..|+|||.+.+.. .++.++||||||+++|++++|+.||......+
T Consensus 128 nili~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~-~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~ 206 (283)
T cd05118 128 NLLINTEGVLKLADFGLARSFGSPVRPYTHYVVTRWYRAPELLLGDK-GYSTPVDIWSVGCIFAELLSRRPLFPGKSEID 206 (283)
T ss_pred HEEECCCCcEEEeeeeeeEecCCCcccccCccCcccccCcHHHhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 9999999999999999998775443 222345788999999887652 27889999999999999999999986533211
Q ss_pred ccccHHHHHHHHHhcCCCCccc---------ccccc----CCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 746 KEGNLVSWVRGLVRNNKGSRAI---------DPKIR----DTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 746 ~~~~~~~~~~~~~~~~~~~~~~---------~~~~~----~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
....+........ .+...... -+... .....+.+.++.+++.+||+.||.+||++++++.
T Consensus 207 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 207 QLFKIFRTLGTPD-PEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred HHHHHHHHcCCCc-hHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 1101000000000 00000000 00000 0112345678999999999999999999999975
No 350
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=2.9e-33 Score=300.25 Aligned_cols=262 Identities=22% Similarity=0.297 Sum_probs=192.5
Q ss_pred hcCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCc--ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCC------
Q 003504 507 TSNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGST--LTDQEAARELEYLGRIKHPNLVPLTGYCIAGD------ 577 (815)
Q Consensus 507 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~------ 577 (815)
.++|+..+.||+|+||.||+|.. .+++.||||.+..... .....+.+|++++++++||||++++++|...+
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 34688899999999999999995 4688999998865322 22345678999999999999999999987654
Q ss_pred --eeEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCC
Q 003504 578 --QRIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCS 655 (815)
Q Consensus 578 --~~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~ 655 (815)
..++||||+.+ +|.+++... ...+++.....++.|++.||+||| +
T Consensus 91 ~~~~~lv~e~~~~-~l~~~l~~~-----------------------------~~~~~~~~~~~i~~qi~~al~~lH---~ 137 (310)
T cd07865 91 KGSFYLVFEFCEH-DLAGLLSNK-----------------------------NVKFTLSEIKKVMKMLLNGLYYIH---R 137 (310)
T ss_pred CceEEEEEcCCCc-CHHHHHHhc-----------------------------ccCCCHHHHHHHHHHHHHHHHHHH---H
Confidence 34999999975 888877542 235788899999999999999999 7
Q ss_pred CCeeeccCCCCceEEcCCCCeeecccccceecCCCCc-----cccccccccccCCcccCCCCCCCCCcCcchhHHHHHHH
Q 003504 656 PPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLD-----EEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLE 730 (815)
Q Consensus 656 ~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~e 730 (815)
.+++||||||+||+++.++.+||+|||++........ .....++..|+|||.+.+... ++.++||||||+++||
T Consensus 138 ~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~~Di~slG~~l~e 216 (310)
T cd07865 138 NKILHRDMKAANILITKDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERD-YGPPIDMWGAGCIMAE 216 (310)
T ss_pred CCeeccCCCHHHEEECCCCcEEECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcc-cCchhhhHHHHHHHHH
Confidence 8999999999999999999999999999986643221 123347888999998765432 5789999999999999
Q ss_pred HHhCCCCCCCCCCccccccHHHHHHHHHhc---CCC-----Ccccc----cc-ccCC-----CCHHHHHHHHHHHhhccc
Q 003504 731 LITGKKPLGDDYPEEKEGNLVSWVRGLVRN---NKG-----SRAID----PK-IRDT-----GPEKQMEEALKIGYLCTA 792 (815)
Q Consensus 731 l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~-----~~~~~----~~-~~~~-----~~~~~~~~~~~l~~~Cl~ 792 (815)
|++|+.||....+.... ..+...... ... ....+ +. .... .+......+.+++.+||.
T Consensus 217 l~t~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~ 292 (310)
T cd07865 217 MWTRSPIMQGNTEQHQL----TLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLV 292 (310)
T ss_pred HHhCCCCCCCCCHHHHH----HHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhc
Confidence 99999999754322111 111111000 000 00000 00 0000 001123456799999999
Q ss_pred cCCCCCCCHHHHHH
Q 003504 793 DLPLKRPSMQQIVG 806 (815)
Q Consensus 793 ~dP~~RPs~~~v~~ 806 (815)
.||++||+++++++
T Consensus 293 ~~P~~R~t~~e~l~ 306 (310)
T cd07865 293 LDPAKRIDADTALN 306 (310)
T ss_pred CChhhccCHHHHhc
Confidence 99999999999975
No 351
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=3.3e-33 Score=299.25 Aligned_cols=247 Identities=24% Similarity=0.338 Sum_probs=193.5
Q ss_pred CCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCc---ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEE
Q 003504 509 NFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGST---LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYD 584 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 584 (815)
.|+..+.||+|+||.||+|.. .++..||+|.+..... .....+.+|+++++.++|||++++++++......++|||
T Consensus 16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 95 (308)
T cd06634 16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME 95 (308)
T ss_pred HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEE
Confidence 366678899999999999995 4678899998864222 233567889999999999999999999999999999999
Q ss_pred eCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCC
Q 003504 585 YMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIK 664 (815)
Q Consensus 585 y~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk 664 (815)
|+. |++.+++... ...+++..+..++.|++.||.||| +.+++||||+
T Consensus 96 ~~~-~~l~~~~~~~-----------------------------~~~l~~~~~~~~~~~l~~~l~~LH---~~~i~H~dl~ 142 (308)
T cd06634 96 YCL-GSASDLLEVH-----------------------------KKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVK 142 (308)
T ss_pred ccC-CCHHHHHHHc-----------------------------CCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCC
Confidence 997 6888877532 234678888999999999999999 7899999999
Q ss_pred CCceEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCC-CCCCCCcCcchhHHHHHHHHHhCCCCCCCCCC
Q 003504 665 ASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPD-SDFPTPKSDVYCYGVVLLELITGKKPLGDDYP 743 (815)
Q Consensus 665 ~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~ 743 (815)
|+||+++.++.+||+|||++...... ....|+..|+|||.+.+. ...++.++|||||||++|||++|+.||.....
T Consensus 143 p~nil~~~~~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~ 219 (308)
T cd06634 143 AGNILLSEPGLVKLGDFGSASIMAPA---NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA 219 (308)
T ss_pred HHhEEECCCCcEEECCcccceeecCc---ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccH
Confidence 99999999999999999998866432 234588899999987532 12268899999999999999999999864211
Q ss_pred ccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003504 744 EEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGL 807 (815)
Q Consensus 744 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~ 807 (815)
. .......... .+.. .....+..+.+++.+||..+|++||+++++++.
T Consensus 220 ~-------~~~~~~~~~~------~~~~---~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~ 267 (308)
T cd06634 220 M-------SALYHIAQNE------SPAL---QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 267 (308)
T ss_pred H-------HHHHHHhhcC------CCCc---CcccccHHHHHHHHHHhhCCcccCCCHHHHhhC
Confidence 1 1111111111 0111 123456678999999999999999999999764
No 352
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=1e-33 Score=307.16 Aligned_cols=263 Identities=18% Similarity=0.232 Sum_probs=196.5
Q ss_pred hcCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecC--CcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCC-----e
Q 003504 507 TSNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHG--STLTDQEAARELEYLGRIKHPNLVPLTGYCIAGD-----Q 578 (815)
Q Consensus 507 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~-----~ 578 (815)
..+|.+.+.||+|+||.||+|+. .++..||||.+... .......+.+|+.+++.++||||+++++++.... .
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 34688889999999999999984 56899999998653 2223456778999999999999999999886542 4
Q ss_pred eEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCe
Q 003504 579 RIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPI 658 (815)
Q Consensus 579 ~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~i 658 (815)
.++|+||+. ++|.+++.. ...+++.....++.|++.||.||| +.++
T Consensus 84 ~~lv~e~~~-~~L~~~~~~------------------------------~~~l~~~~~~~i~~qi~~aL~~LH---~~~i 129 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRS------------------------------SQTLSDDHCQYFLYQLLRGLKYIH---SANV 129 (337)
T ss_pred EEEEEeCCC-CCHHHHHhc------------------------------CCCCCHHHHHHHHHHHHHHHHHHH---hCCE
Confidence 799999997 688888854 235778889999999999999999 8899
Q ss_pred eeccCCCCceEEcCCCCeeecccccceecCCCC-ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCC
Q 003504 659 IHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGL-DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKP 737 (815)
Q Consensus 659 vHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p 737 (815)
+||||||+||+++.++.+||+|||+++...... ......++..|+|||.+..... ++.++|||||||++|||++|+.|
T Consensus 130 ~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~~DiwslG~il~~l~~g~~p 208 (337)
T cd07858 130 LHRDLKPSNLLLNANCDLKICDFGLARTTSEKGDFMTEYVVTRWYRAPELLLNCSE-YTTAIDVWSVGCIFAELLGRKPL 208 (337)
T ss_pred ecCCCCHHHEEEcCCCCEEECcCccccccCCCcccccccccccCccChHHHhcCCC-CCCcccHHHHHHHHHHHHcCCCC
Confidence 999999999999999999999999998765432 2233457889999998765332 68899999999999999999999
Q ss_pred CCCCCCccccccHHHHH----------------HHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCH
Q 003504 738 LGDDYPEEKEGNLVSWV----------------RGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSM 801 (815)
Q Consensus 738 ~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~ 801 (815)
|...........+.... ...... .....++.... .....+.++.+++.+||+.+|++||++
T Consensus 209 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~Rps~ 285 (337)
T cd07858 209 FPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRS--LPYTPRQSFAR-LFPHANPLAIDLLEKMLVFDPSKRITV 285 (337)
T ss_pred CCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHh--cCcccccCHHH-HcccCCHHHHHHHHHHhcCChhhccCH
Confidence 97532211111111000 000000 00000010000 012356778999999999999999999
Q ss_pred HHHHHH
Q 003504 802 QQIVGL 807 (815)
Q Consensus 802 ~~v~~~ 807 (815)
+++++.
T Consensus 286 ~ell~h 291 (337)
T cd07858 286 EEALAH 291 (337)
T ss_pred HHHHcC
Confidence 999865
No 353
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=5.3e-34 Score=307.51 Aligned_cols=266 Identities=23% Similarity=0.286 Sum_probs=199.5
Q ss_pred CCCeecccCCeeeEEEE-cCCCcEEEEEEeecCCc-ccHHHHHHHHHHhcCCCCCCceeeeeEEEeC------CeeEEEE
Q 003504 512 RGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHGST-LTDQEAARELEYLGRIKHPNLVPLTGYCIAG------DQRIAIY 583 (815)
Q Consensus 512 ~~~~ig~G~~g~Vy~~~-~~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~------~~~~lv~ 583 (815)
..+.||+|+||.||+|+ ..+|+.||||.++.... ...+...+|+++|++++|||||+++|.-.+. ....+||
T Consensus 17 ~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvm 96 (732)
T KOG4250|consen 17 MDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVM 96 (732)
T ss_pred ehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEE
Confidence 35789999999999999 56899999999977543 3456678999999999999999999976553 3678999
Q ss_pred EeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccC
Q 003504 584 DYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDI 663 (815)
Q Consensus 584 ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDl 663 (815)
|||.+|||+..|.+. .+-..++....+.+..+++.||.||| +.+||||||
T Consensus 97 EyC~gGsL~~~L~~P---------------------------EN~~GLpE~e~l~lL~d~~~al~~Lr---En~IvHRDl 146 (732)
T KOG4250|consen 97 EYCSGGSLRKVLNSP---------------------------ENAYGLPESEFLDLLSDLVSALRHLR---ENGIVHRDL 146 (732)
T ss_pred eecCCCcHHHHhcCc---------------------------ccccCCCHHHHHHHHHHHHHHHHHHH---HcCceeccC
Confidence 999999999999762 34556888899999999999999999 899999999
Q ss_pred CCCceEEc--CCCC--eeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCC
Q 003504 664 KASSVYLD--MNLE--PRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLG 739 (815)
Q Consensus 664 k~~NIll~--~~~~--~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~ 739 (815)
||.||++- ++|+ -||+|||.|+.+..+.......||..|.+||+.... .+++..+|.|||||++||++||..||-
T Consensus 147 KP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s~~~S~vGT~~YLhPel~E~q-~~y~~tVDLWS~GvtlY~caTG~lPF~ 225 (732)
T KOG4250|consen 147 KPGNIVLQIGEDGQSIYKLTDFGAARELDDNSLFTSLVGTEEYLHPELYERQ-KKYTATVDLWSFGVTLYECATGELPFI 225 (732)
T ss_pred CCCcEEEeecCCCceEEeeecccccccCCCCCeeeeecCchhhcChHHHhhc-cCcCceeehhhhhhHHHHHhccCCCCC
Confidence 99999984 4454 699999999999888877888899999999998752 237889999999999999999999996
Q ss_pred CCCCccccccHHHHHHHHHhcCCC--Ccccccc----------ccCC--CCHHHHHHHHHHHhhccccCCCCCC--CHHH
Q 003504 740 DDYPEEKEGNLVSWVRGLVRNNKG--SRAIDPK----------IRDT--GPEKQMEEALKIGYLCTADLPLKRP--SMQQ 803 (815)
Q Consensus 740 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~----------~~~~--~~~~~~~~~~~l~~~Cl~~dP~~RP--s~~~ 803 (815)
.. ....+....+......... .-...+. +... -.......+-......+..+|++|. .+-+
T Consensus 226 p~---~~pk~~~~~~~~~~tkkp~~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~ 302 (732)
T KOG4250|consen 226 PF---GGPKNNKEIMWHIITKKPSGVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDR 302 (732)
T ss_pred cC---CCccccchhhhhhhccCCCceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcch
Confidence 42 2222111111111111110 0000110 1100 1223344556666777888888888 6666
Q ss_pred HHHHHHhh
Q 003504 804 IVGLLKDI 811 (815)
Q Consensus 804 v~~~L~~i 811 (815)
....+..|
T Consensus 303 ~Fa~~~dI 310 (732)
T KOG4250|consen 303 FFAEVDDI 310 (732)
T ss_pred HHHHHHHH
Confidence 66666555
No 354
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=7.4e-33 Score=291.96 Aligned_cols=242 Identities=22% Similarity=0.244 Sum_probs=186.9
Q ss_pred eecccCCeeeEEEEc-CCCcEEEEEEeecCCcc---cHHHHHHHH---HHhcCCCCCCceeeeeEEEeCCeeEEEEEeCC
Q 003504 515 LLAEGKFGPVYRGFL-PGGIHVAVKVLVHGSTL---TDQEAAREL---EYLGRIKHPNLVPLTGYCIAGDQRIAIYDYME 587 (815)
Q Consensus 515 ~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~---~~~~~~~E~---~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 587 (815)
.||+|+||.||+|.. .+++.||+|.+...... ....+..|. ..++...||+|+++++++...+..++||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 489999999999985 46889999998754222 112233343 34555689999999999999999999999999
Q ss_pred CCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCc
Q 003504 588 NGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASS 667 (815)
Q Consensus 588 ~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~N 667 (815)
+|+|..++.. ...+++..+..++.|+++||+||| +.+++||||||+|
T Consensus 81 g~~L~~~l~~------------------------------~~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~di~p~n 127 (278)
T cd05606 81 GGDLHYHLSQ------------------------------HGVFSEAEMRFYAAEIILGLEHMH---NRFVVYRDLKPAN 127 (278)
T ss_pred CCcHHHHHHh------------------------------cCCCCHHHHHHHHHHHHHHHHHHH---HCCEEcCCCCHHH
Confidence 9999988853 235889999999999999999999 7899999999999
Q ss_pred eEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCcccc
Q 003504 668 VYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKE 747 (815)
Q Consensus 668 Ill~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~ 747 (815)
|+++.++.+||+|||+++..... ......|+..|+|||.+..... ++.++|||||||++|||++|+.||........
T Consensus 128 ili~~~~~~kl~dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~-~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~- 204 (278)
T cd05606 128 ILLDEHGHVRISDLGLACDFSKK-KPHASVGTHGYMAPEVLQKGVA-YDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK- 204 (278)
T ss_pred EEECCCCCEEEccCcCccccCcc-CCcCcCCCcCCcCcHHhcCCCC-CCcccchHhHHHHHHHHHhCCCCCCCCCccch-
Confidence 99999999999999998765432 2234468999999999875432 68899999999999999999999975322111
Q ss_pred ccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCC-----CHHHHHH
Q 003504 748 GNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRP-----SMQQIVG 806 (815)
Q Consensus 748 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----s~~~v~~ 806 (815)
...... ... ..+ ..+...+.++.+++.+|+..+|++|| ++.++++
T Consensus 205 ---~~~~~~-~~~------~~~----~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 205 ---HEIDRM-TLT------MAV----ELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred ---HHHHHH-hhc------cCC----CCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 110000 000 011 11233467889999999999999999 9999875
No 355
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.2e-33 Score=320.84 Aligned_cols=264 Identities=19% Similarity=0.213 Sum_probs=184.1
Q ss_pred hcCCCCCCeecccCCeeeEEEEcCC--CcEEEEE------------------EeecCCcccHHHHHHHHHHhcCCCCCCc
Q 003504 507 TSNFDRGTLLAEGKFGPVYRGFLPG--GIHVAVK------------------VLVHGSTLTDQEAARELEYLGRIKHPNL 566 (815)
Q Consensus 507 ~~~~~~~~~ig~G~~g~Vy~~~~~~--~~~vavK------------------~l~~~~~~~~~~~~~E~~~l~~l~H~ni 566 (815)
.++|.+.+.||+|+||.||+|.... +..+++| .+.. .......+.+|+.++++++||||
T Consensus 147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~-~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKA-GSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhc-chHHHHHHHHHHHHHHhCCCCCc
Confidence 4689999999999999999987532 2222222 1111 11223467899999999999999
Q ss_pred eeeeeEEEeCCeeEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHH
Q 003504 567 VPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARA 646 (815)
Q Consensus 567 v~l~g~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~ 646 (815)
+++++++...+..++|+|++.. +|.+++...... ............|+.|++.|
T Consensus 226 v~l~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~-------------------------~~~~~~~~~~~~i~~ql~~a 279 (501)
T PHA03210 226 LKIEEILRSEANTYMITQKYDF-DLYSFMYDEAFD-------------------------WKDRPLLKQTRAIMKQLLCA 279 (501)
T ss_pred CcEeEEEEECCeeEEEEecccc-CHHHHHhhcccc-------------------------ccccccHHHHHHHHHHHHHH
Confidence 9999999999999999999864 787777542100 01112345566899999999
Q ss_pred HHHHhcCCCCCeeeccCCCCceEEcCCCCeeecccccceecCCCC--ccccccccccccCCcccCCCCCCCCCcCcchhH
Q 003504 647 LAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGL--DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCY 724 (815)
Q Consensus 647 L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~ 724 (815)
|+||| +.+||||||||+|||++.++.+||+|||+++.+.... ......||..|+|||++.+.. ++.++|||||
T Consensus 280 L~yLH---~~gIiHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DiwSl 354 (501)
T PHA03210 280 VEYIH---DKKLIHRDIKLENIFLNCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDG--YCEITDIWSC 354 (501)
T ss_pred HHHHH---hCCeecCCCCHHHEEECCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCC--CCcHHHHHHH
Confidence 99999 8999999999999999999999999999998765432 223456999999999988765 7899999999
Q ss_pred HHHHHHHHhCCCC-CCCCCCccccccHHHHHHHH-----------------HhcCCC---CccccccccCCCCHHHHHHH
Q 003504 725 GVVLLELITGKKP-LGDDYPEEKEGNLVSWVRGL-----------------VRNNKG---SRAIDPKIRDTGPEKQMEEA 783 (815)
Q Consensus 725 Gvvl~el~tg~~p-~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~---~~~~~~~~~~~~~~~~~~~~ 783 (815)
||++|||++|..+ +..... .....+....... +..... ...+.+.+. ....+..+
T Consensus 355 Gvil~ell~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~---~~~~~~~~ 430 (501)
T PHA03210 355 GLILLDMLSHDFCPIGDGGG-KPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIR---NLGLPADF 430 (501)
T ss_pred HHHHHHHHHCCCCCccCCCC-CHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHH---hcCCChHH
Confidence 9999999998754 432211 1111111111110 000000 000000000 00123456
Q ss_pred HHHHhhccccCCCCCCCHHHHHH
Q 003504 784 LKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 784 ~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
.+++.+|++.||++||++.|+++
T Consensus 431 ~~li~kmL~~DP~~Rpsa~elL~ 453 (501)
T PHA03210 431 EYPLVKMLTFDWHLRPGAAELLA 453 (501)
T ss_pred HHHHHHHhccCcccCcCHHHHhh
Confidence 77899999999999999999986
No 356
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=1.1e-33 Score=306.51 Aligned_cols=268 Identities=20% Similarity=0.229 Sum_probs=202.1
Q ss_pred CCCCCCeecccCCeeeEEEEcC-CCcEEEEEEeecCC--cccHHHHHHHHHHhcCCCCCCceeeeeEEEeCC-----eeE
Q 003504 509 NFDRGTLLAEGKFGPVYRGFLP-GGIHVAVKVLVHGS--TLTDQEAARELEYLGRIKHPNLVPLTGYCIAGD-----QRI 580 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~-----~~~ 580 (815)
+|++.+.||+|+||.||+|+.. ++..||||.+.... ....+.+.+|+++++.++||||+++++++.... ..+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 4778899999999999999964 58899999987543 334567899999999999999999999998765 789
Q ss_pred EEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeee
Q 003504 581 AIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIH 660 (815)
Q Consensus 581 lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivH 660 (815)
+||||+++ +|.++++. ...+++..+..++.+++.||+||| +.+|+|
T Consensus 81 lv~e~~~~-~l~~~l~~------------------------------~~~l~~~~~~~i~~~l~~~l~~LH---~~gi~H 126 (330)
T cd07834 81 IVTELMET-DLHKVIKS------------------------------PQPLTDDHIQYFLYQILRGLKYLH---SANVIH 126 (330)
T ss_pred EEecchhh-hHHHHHhC------------------------------CCCCCHHHHHHHHHHHHHHHHHHH---hCCeec
Confidence 99999985 89888864 226788999999999999999999 889999
Q ss_pred ccCCCCceEEcCCCCeeecccccceecCCCC----ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCC
Q 003504 661 RDIKASSVYLDMNLEPRLSDFGLAKIFGNGL----DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKK 736 (815)
Q Consensus 661 rDlk~~NIll~~~~~~kl~Dfgla~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~ 736 (815)
|||||+||+++.++.++|+|||++....... ......++..|+|||.+.+.. .++.++||||||+++|+|++|+.
T Consensus 127 ~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~sDi~slG~il~~l~~g~~ 205 (330)
T cd07834 127 RDLKPSNILVNSNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSS-RYTKAIDIWSVGCIFAELLTRKP 205 (330)
T ss_pred CCCCHHHEEEcCCCCEEEcccCceEeecccccccccccccccccCcCCceeeeccc-CCCcchhHHHHHHHHHHHHcCCC
Confidence 9999999999999999999999998775443 123345788999999988763 27889999999999999999999
Q ss_pred CCCCCCCccccccHHHHHHHHH-------hcCCCCcccc---ccc---cCCCCHHHHHHHHHHHhhccccCCCCCCCHHH
Q 003504 737 PLGDDYPEEKEGNLVSWVRGLV-------RNNKGSRAID---PKI---RDTGPEKQMEEALKIGYLCTADLPLKRPSMQQ 803 (815)
Q Consensus 737 p~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~---~~~---~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~ 803 (815)
||......+....+........ ........+. +.. ........+..+.+++.+||+.+|++||++++
T Consensus 206 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ 285 (330)
T cd07834 206 LFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADE 285 (330)
T ss_pred CcCCCCHHHHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHH
Confidence 9976443221111111000000 0000000000 000 00001224567899999999999999999999
Q ss_pred HHHH--HHhh
Q 003504 804 IVGL--LKDI 811 (815)
Q Consensus 804 v~~~--L~~i 811 (815)
+++. ++++
T Consensus 286 ll~~~~~~~~ 295 (330)
T cd07834 286 ALAHPYLAQL 295 (330)
T ss_pred HHhCccHHhh
Confidence 9873 4444
No 357
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=9.1e-33 Score=296.45 Aligned_cols=245 Identities=25% Similarity=0.353 Sum_probs=192.4
Q ss_pred CCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCcc---cHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEe
Q 003504 510 FDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGSTL---TDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDY 585 (815)
Q Consensus 510 ~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~---~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 585 (815)
|...+.||+|+||.||+|+. .++..||+|.+...... ..+.+.+|++++++++|||++++++++.+.+..++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 55567899999999999985 46889999998653222 234678899999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCC
Q 003504 586 MENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKA 665 (815)
Q Consensus 586 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~ 665 (815)
+. |++.+++... ...+++..+..++.|++.||+||| +.+++||||+|
T Consensus 103 ~~-~~l~~~l~~~-----------------------------~~~l~~~~~~~~~~qi~~al~~LH---~~gi~H~dl~p 149 (313)
T cd06633 103 CL-GSASDLLEVH-----------------------------KKPLQEVEIAAITHGALQGLAYLH---SHNMIHRDIKA 149 (313)
T ss_pred CC-CCHHHHHHhc-----------------------------CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCh
Confidence 96 5788877542 335788999999999999999999 78999999999
Q ss_pred CceEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCC-CCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCc
Q 003504 666 SSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPD-SDFPTPKSDVYCYGVVLLELITGKKPLGDDYPE 744 (815)
Q Consensus 666 ~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~ 744 (815)
+||+++.++.+||+|||++..... .....|+..|+|||++... ...++.++|||||||++|||++|+.||.....
T Consensus 150 ~nili~~~~~~kL~dfg~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~- 225 (313)
T cd06633 150 GNILLTEPGQVKLADFGSASKSSP---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA- 225 (313)
T ss_pred hhEEECCCCCEEEeecCCCcccCC---CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh-
Confidence 999999999999999999865432 2344688999999987532 22368899999999999999999999875322
Q ss_pred cccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 745 EKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
............ +.. .....+..+.+++.+||+.+|.+||++.+++.
T Consensus 226 ------~~~~~~~~~~~~------~~~---~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~ 272 (313)
T cd06633 226 ------MSALYHIAQNDS------PTL---QSNEWTDSFRGFVDYCLQKIPQERPASAELLR 272 (313)
T ss_pred ------HHHHHHHHhcCC------CCC---CccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 111111111110 111 12223456889999999999999999999985
No 358
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4e-34 Score=291.73 Aligned_cols=246 Identities=24% Similarity=0.251 Sum_probs=201.3
Q ss_pred cCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCc---ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEE
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGST---LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIY 583 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 583 (815)
+.|..-++||+|+||.||-++. .+|+.+|.|.+.+... ..+.....|-.++.+++.+.||.+-..+.+.+..++|+
T Consensus 185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVL 264 (591)
T KOG0986|consen 185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVL 264 (591)
T ss_pred cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEE
Confidence 4577789999999999999985 5688999998855322 23445678999999999999999999999999999999
Q ss_pred EeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccC
Q 003504 584 DYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDI 663 (815)
Q Consensus 584 ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDl 663 (815)
..|.+|+|.-+|... ....++.....-.|.+|+.||++|| ..+||.||+
T Consensus 265 tlMNGGDLkfHiyn~----------------------------g~~gF~e~ra~FYAAEi~cGLehlH---~~~iVYRDL 313 (591)
T KOG0986|consen 265 TLMNGGDLKFHIYNH----------------------------GNPGFDEQRARFYAAEIICGLEHLH---RRRIVYRDL 313 (591)
T ss_pred EeecCCceeEEeecc----------------------------CCCCCchHHHHHHHHHHHhhHHHHH---hcceeeccC
Confidence 999999999888653 1245777778889999999999999 899999999
Q ss_pred CCCceEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCC
Q 003504 664 KASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYP 743 (815)
Q Consensus 664 k~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~ 743 (815)
||+|||+|+.|+++|+|.|+|..+..+......+||.+|||||++.... |+...|+||+||++|||+.|+.||-....
T Consensus 314 KPeNILLDd~GhvRISDLGLAvei~~g~~~~~rvGT~GYMAPEvl~ne~--Y~~s~Dwf~lGCllYemi~G~sPFr~~Ke 391 (591)
T KOG0986|consen 314 KPENILLDDHGHVRISDLGLAVEIPEGKPIRGRVGTVGYMAPEVLQNEV--YDFSPDWFSLGCLLYEMIAGHSPFRQRKE 391 (591)
T ss_pred ChhheeeccCCCeEeeccceEEecCCCCccccccCcccccCHHHHcCCc--ccCCccHHHHHhHHHHHHcccCchhhhhh
Confidence 9999999999999999999999998888777779999999999999887 78899999999999999999999964211
Q ss_pred ccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCC
Q 003504 744 EEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPS 800 (815)
Q Consensus 744 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs 800 (815)
.... +.+.+...+. ....++..+++..++....+.+||++|.-
T Consensus 392 Kvk~----eEvdrr~~~~----------~~ey~~kFS~eakslc~~LL~Kdp~~RLG 434 (591)
T KOG0986|consen 392 KVKR----EEVDRRTLED----------PEEYSDKFSEEAKSLCEGLLTKDPEKRLG 434 (591)
T ss_pred hhhH----HHHHHHHhcc----------hhhcccccCHHHHHHHHHHHccCHHHhcc
Confidence 1100 0111111110 11235667778889999999999999973
No 359
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-35 Score=280.97 Aligned_cols=254 Identities=21% Similarity=0.309 Sum_probs=196.7
Q ss_pred CCeecccCCeeeEEEEc-CCCcEEEEEEeecCCc-ccHHHHHHHHHHhcC-CCCCCceeeeeEEEeCCeeEEEEEeCCCC
Q 003504 513 GTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGST-LTDQEAARELEYLGR-IKHPNLVPLTGYCIAGDQRIAIYDYMENG 589 (815)
Q Consensus 513 ~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~-l~H~niv~l~g~~~~~~~~~lv~ey~~~g 589 (815)
...||.|+||+|+|-.+ +.|+..|||+++.... .+++++..|.+...+ =+.||||+++|.++..+..|+-||.|+-
T Consensus 69 lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd~- 147 (361)
T KOG1006|consen 69 LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMDI- 147 (361)
T ss_pred HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHhh-
Confidence 46799999999999884 6799999999987544 556788889886554 4799999999999999999999999976
Q ss_pred ChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCceE
Q 003504 590 NLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVY 669 (815)
Q Consensus 590 sL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NIl 669 (815)
|+..+...- |. .....+.....-+|+.-+..||.||-+ ...|||||+||+|||
T Consensus 148 SlDklYk~v--------------y~-----------vq~~~ipE~Ilg~ItvatV~AL~yLK~--~lkiIHRDvKPSNIL 200 (361)
T KOG1006|consen 148 SLDKLYKRV--------------YS-----------VQKSRIPENILGHITVATVDALDYLKE--ELKIIHRDVKPSNIL 200 (361)
T ss_pred hHHHHHHHH--------------HH-----------HHhccCcHhhhhheeeeehhHHHHHHH--HhhhhhccCChhheE
Confidence 776654321 00 012234444445677778899999986 678999999999999
Q ss_pred EcCCCCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCcccccc
Q 003504 670 LDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGN 749 (815)
Q Consensus 670 l~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~ 749 (815)
+|..|.+|++|||.+..+......+..+|...|||||-+......++.+|||||+|+.|||+.||+.||.. ..+
T Consensus 201 ldr~G~vKLCDFGIcGqLv~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~------w~s 274 (361)
T KOG1006|consen 201 LDRHGDVKLCDFGICGQLVDSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRK------WDS 274 (361)
T ss_pred EecCCCEeeecccchHhHHHHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcch------HHH
Confidence 99999999999999987776666667789999999999988776689999999999999999999999863 223
Q ss_pred HHHHHHHHHhcCCCCccccccccCC-CCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 750 LVSWVRGLVRNNKGSRAIDPKIRDT-GPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 750 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
+.+.+.+.+.... |.+... ..-+....+..++..|+.+|-+.||.+.++.+
T Consensus 275 vfeql~~Vv~gdp------p~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 275 VFEQLCQVVIGDP------PILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred HHHHHHHHHcCCC------CeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence 4444444433321 111111 12235677899999999999999999998865
No 360
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=6e-33 Score=299.53 Aligned_cols=267 Identities=20% Similarity=0.266 Sum_probs=196.4
Q ss_pred HHHHhcCCCCCCeecccCCeeeEEEE-cCCCcEEEEEEeecCC--cccHHHHHHHHHHhcCCCCCCceeeeeEEEe-CCe
Q 003504 503 LLSATSNFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHGS--TLTDQEAARELEYLGRIKHPNLVPLTGYCIA-GDQ 578 (815)
Q Consensus 503 l~~~~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~-~~~ 578 (815)
+...+++|+..+.||+|+||.||+|. ..++..||||++.... ....+.+.+|++++++++||||+++++++.. ...
T Consensus 5 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 84 (328)
T cd07856 5 VFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLED 84 (328)
T ss_pred eeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCc
Confidence 34467889999999999999999998 4578999999885422 2234678899999999999999999999876 557
Q ss_pred eEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCe
Q 003504 579 RIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPI 658 (815)
Q Consensus 579 ~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~i 658 (815)
.++|+||+. ++|.++++.. .+++.....++.|++.||+||| +.+|
T Consensus 85 ~~lv~e~~~-~~L~~~~~~~-------------------------------~~~~~~~~~~~~ql~~aL~~LH---~~~i 129 (328)
T cd07856 85 IYFVTELLG-TDLHRLLTSR-------------------------------PLEKQFIQYFLYQILRGLKYVH---SAGV 129 (328)
T ss_pred EEEEeehhc-cCHHHHHhcC-------------------------------CCCHHHHHHHHHHHHHHHHHHH---hCCc
Confidence 889999984 5898887531 3566677789999999999999 8899
Q ss_pred eeccCCCCceEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCC
Q 003504 659 IHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738 (815)
Q Consensus 659 vHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~ 738 (815)
+||||+|+||+++.++.+||+|||.+...... .....++..|+|||.+.+... ++.++|||||||++||+++|+.||
T Consensus 130 iH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~-~~~~~Dv~slG~il~el~tg~~~f 206 (328)
T cd07856 130 VHRDLKPSNILINENCDLKICDFGLARIQDPQ--MTGYVSTRYYRAPEIMLTWQK-YDVEVDIWSAGCIFAEMLEGKPLF 206 (328)
T ss_pred ccCCCCHHHEeECCCCCEEeCccccccccCCC--cCCCcccccccCceeeeccCC-cCcHHHHHHHHHHHHHHHhCCCCC
Confidence 99999999999999999999999999865432 223457889999998765332 688999999999999999999999
Q ss_pred CCCCCccccccHH--------HHHHHHHhcCCCCccccccccCCCC-----HHHHHHHHHHHhhccccCCCCCCCHHHHH
Q 003504 739 GDDYPEEKEGNLV--------SWVRGLVRNNKGSRAIDPKIRDTGP-----EKQMEEALKIGYLCTADLPLKRPSMQQIV 805 (815)
Q Consensus 739 ~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~ 805 (815)
...........+. ++...............-......+ ...+.++.+++.+|++.+|++||++++++
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell 286 (328)
T cd07856 207 PGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEAL 286 (328)
T ss_pred CCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHh
Confidence 7533211111111 1111111110000000000000001 12346889999999999999999999987
Q ss_pred HH
Q 003504 806 GL 807 (815)
Q Consensus 806 ~~ 807 (815)
..
T Consensus 287 ~~ 288 (328)
T cd07856 287 AH 288 (328)
T ss_pred cC
Confidence 53
No 361
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=2.5e-33 Score=300.90 Aligned_cols=266 Identities=23% Similarity=0.278 Sum_probs=193.2
Q ss_pred hcCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCcc--cHHHHHHHHHHhcCCCCCCceeeeeEEEeCC------
Q 003504 507 TSNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGSTL--TDQEAARELEYLGRIKHPNLVPLTGYCIAGD------ 577 (815)
Q Consensus 507 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~------ 577 (815)
.++|++.+.||+|+||.||+|+. .++..||||++...... ....+.+|++++++++||||+++++++.+..
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 46788999999999999999995 46889999998653322 2346788999999999999999999876543
Q ss_pred --eeEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCC
Q 003504 578 --QRIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCS 655 (815)
Q Consensus 578 --~~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~ 655 (815)
..++|+||+.. ++...+... ...+++.....++.|+++||+||| +
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~~-----------------------------~~~~~~~~~~~i~~~l~~al~~lH---~ 133 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLENP-----------------------------SVKLTESQIKCYMLQLLEGINYLH---E 133 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhcc-----------------------------ccCCCHHHHHHHHHHHHHHHHHHH---h
Confidence 35899999976 677776531 235788999999999999999999 8
Q ss_pred CCeeeccCCCCceEEcCCCCeeecccccceecCCCCc------------cccccccccccCCcccCCCCCCCCCcCcchh
Q 003504 656 PPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLD------------EEIARGSPGYIPPEFAQPDSDFPTPKSDVYC 723 (815)
Q Consensus 656 ~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~~------------~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S 723 (815)
.+|+||||||+||++++++.+||+|||+++....... .....|++.|+|||.+.+... ++.++||||
T Consensus 134 ~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~~Dv~s 212 (311)
T cd07866 134 NHILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERR-YTTAVDIWG 212 (311)
T ss_pred CCeecCCCCHHHEEECCCCCEEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCc-cCchhHhHH
Confidence 8999999999999999999999999999986543221 112246788999998765432 688999999
Q ss_pred HHHHHHHHHhCCCCCCCCCCccccccHHHHHHHHHhc-----CCCCc----cccccccCC---CCHHHHHHHHHHHhhcc
Q 003504 724 YGVVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVRN-----NKGSR----AIDPKIRDT---GPEKQMEEALKIGYLCT 791 (815)
Q Consensus 724 ~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~----~~~~~~~~~---~~~~~~~~~~~l~~~Cl 791 (815)
|||++|||++|+.||.+.........+.......... ..... ...+..... ........+.+++.+|+
T Consensus 213 lG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l 292 (311)
T cd07866 213 IGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLL 292 (311)
T ss_pred HHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHc
Confidence 9999999999999997543322111111110000000 00000 000000000 01122357889999999
Q ss_pred ccCCCCCCCHHHHHH
Q 003504 792 ADLPLKRPSMQQIVG 806 (815)
Q Consensus 792 ~~dP~~RPs~~~v~~ 806 (815)
..||++||++.+++.
T Consensus 293 ~~~p~~R~t~~ell~ 307 (311)
T cd07866 293 SLDPYKRLTASDALE 307 (311)
T ss_pred ccCcccCcCHHHHhc
Confidence 999999999999874
No 362
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=4.1e-33 Score=294.80 Aligned_cols=263 Identities=23% Similarity=0.291 Sum_probs=197.8
Q ss_pred CCCCCeecccCCeeeEEEEcC-CCcEEEEEEeecCC--cccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeC
Q 003504 510 FDRGTLLAEGKFGPVYRGFLP-GGIHVAVKVLVHGS--TLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYM 586 (815)
Q Consensus 510 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 586 (815)
|+..+.||+|+||.||+|+.. +++.||+|.+.... ....+.+.+|++++++++|||++++++++.+.+..++|+||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 456788999999999999965 58999999987643 233467788999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCC
Q 003504 587 ENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKAS 666 (815)
Q Consensus 587 ~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~ 666 (815)
+ ++|.+++... ...+++..+.+++.+++.||+||| +.+|+||||+|+
T Consensus 81 ~-~~l~~~i~~~-----------------------------~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~~l~~~ 127 (282)
T cd07829 81 D-MDLKKYLDKR-----------------------------PGPLSPNLIKSIMYQLLRGLAYCH---SHRILHRDLKPQ 127 (282)
T ss_pred C-cCHHHHHHhh-----------------------------ccCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChh
Confidence 8 5999999752 135788999999999999999999 789999999999
Q ss_pred ceEEcCCCCeeecccccceecCCCC-ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCcc
Q 003504 667 SVYLDMNLEPRLSDFGLAKIFGNGL-DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEE 745 (815)
Q Consensus 667 NIll~~~~~~kl~Dfgla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~ 745 (815)
||++++++.+||+|||.++...... ......++..|+|||.+.+.. .++.++|||||||++||+++|+.||......+
T Consensus 128 ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~-~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~ 206 (282)
T cd07829 128 NILINRDGVLKLADFGLARAFGIPLRTYTHEVVTLWYRAPEILLGSK-HYSTAVDIWSVGCIFAEMITGKPLFPGDSEID 206 (282)
T ss_pred eEEEcCCCCEEEecCCcccccCCCccccCccccCcCcCChHHhcCCc-CCCccccHHHHHHHHHHHHhCCCCCCCccHHH
Confidence 9999999999999999998765432 223344677899999887552 26889999999999999999999997643221
Q ss_pred ccccHHHHHHH----HH---hcCCCCccccccccC----CCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 746 KEGNLVSWVRG----LV---RNNKGSRAIDPKIRD----TGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 746 ~~~~~~~~~~~----~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
....+.+.... .+ .........-+.... .........+.+++.+||..+|++||++++++.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 207 QLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred HHHHHHHHhCCCcHHHHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 11111111000 00 000000000000000 001123567999999999999999999999975
No 363
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=3.6e-33 Score=303.35 Aligned_cols=265 Identities=20% Similarity=0.246 Sum_probs=192.7
Q ss_pred cCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCC--cccHHHHHHHHHHhcCCCCCCceeeeeEEEeCC------e
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGS--TLTDQEAARELEYLGRIKHPNLVPLTGYCIAGD------Q 578 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~------~ 578 (815)
++|...+.||+|+||.||+|+. .+|..||||++.... ......+.+|++++++++||||+++++++.... .
T Consensus 15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 94 (342)
T cd07879 15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQD 94 (342)
T ss_pred cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCce
Confidence 6888899999999999999995 568999999986532 222356789999999999999999999987542 4
Q ss_pred eEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCe
Q 003504 579 RIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPI 658 (815)
Q Consensus 579 ~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~i 658 (815)
.++|+||+.. +|..++. ..+++.....++.|++.||+||| +.++
T Consensus 95 ~~lv~e~~~~-~l~~~~~--------------------------------~~~~~~~~~~~~~qi~~aL~~LH---~~~i 138 (342)
T cd07879 95 FYLVMPYMQT-DLQKIMG--------------------------------HPLSEDKVQYLVYQMLCGLKYIH---SAGI 138 (342)
T ss_pred EEEEeccccc-CHHHHHc--------------------------------CCCCHHHHHHHHHHHHHHHHHHH---HCCc
Confidence 6899999975 6665542 23677888899999999999999 8899
Q ss_pred eeccCCCCceEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCC
Q 003504 659 IHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738 (815)
Q Consensus 659 vHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~ 738 (815)
+||||||+||+++.++.+||+|||+++..... .....++..|+|||.+.+... ++.++|||||||++|||++|+.||
T Consensus 139 ~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~-~~~~~Dv~slGvil~el~~g~~pf 215 (342)
T cd07879 139 IHRDLKPGNLAVNEDCELKILDFGLARHADAE--MTGYVVTRWYRAPEVILNWMH-YNQTVDIWSVGCIMAEMLTGKTLF 215 (342)
T ss_pred ccCCCCHHHEEECCCCCEEEeeCCCCcCCCCC--CCCceeeecccChhhhcCccc-cCchHHHHHHHHHHHHHHhCCCCC
Confidence 99999999999999999999999999865432 233457889999998865322 688999999999999999999999
Q ss_pred CCCCCccccccHHH--------HHHHHHhcCCCCcccc--ccccCC----CCHHHHHHHHHHHhhccccCCCCCCCHHHH
Q 003504 739 GDDYPEEKEGNLVS--------WVRGLVRNNKGSRAID--PKIRDT----GPEKQMEEALKIGYLCTADLPLKRPSMQQI 804 (815)
Q Consensus 739 ~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~--~~~~~~----~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v 804 (815)
...........+.. +.... .......... +..... .......++.+++.+||+.||++||+++++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~ 294 (342)
T cd07879 216 KGKDYLDQLTQILKVTGVPGPEFVQKL-EDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEA 294 (342)
T ss_pred CCCCHHHHHHHHHHhcCCCCHHHHHHh-cccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 75322111000000 00000 0000000000 000000 001234568899999999999999999999
Q ss_pred HHH--HHhhh
Q 003504 805 VGL--LKDIE 812 (815)
Q Consensus 805 ~~~--L~~i~ 812 (815)
+.. ++.++
T Consensus 295 l~h~~f~~~~ 304 (342)
T cd07879 295 LEHPYFDSFR 304 (342)
T ss_pred hcCcchhhcc
Confidence 843 55543
No 364
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=9.5e-36 Score=312.94 Aligned_cols=340 Identities=23% Similarity=0.356 Sum_probs=240.3
Q ss_pred CCeEEEEecCCCCCccCCCcccccCCCCCCEEECcCCCCCCCCcccCCCCCCCEEEccCCcCCccCCccccCCCCCcEEE
Q 003504 27 KQHVTDFLASNSGLSGSVPDTTIGKLSKLQSLDLSENNITALPSDLWSLGSLKSLNLSYNRISGSLPSNIGNFGLLEVFD 106 (815)
Q Consensus 27 ~~~~~~l~~~~~~~~g~~~~~~~~~l~~L~~L~Ls~n~l~~lp~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~ 106 (815)
.+-|+.+++++|.++|.--+..+..+++++.|.|.+.++..+|+++..+.+|++|.+++|++. .+-..++.|+.|+.++
T Consensus 6 LpFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~ 84 (1255)
T KOG0444|consen 6 LPFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLEQVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSVI 84 (1255)
T ss_pred cceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhhhChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHHh
Confidence 456889999999999654445799999999999999999999999999999999999999998 6677889999999999
Q ss_pred ccCCcCC-CCChhhhcCCcCCCEEEcCCCcccccCCcccccccccceeeccCCcCCCCCCchhhccCCCCCEEEcCCCcc
Q 003504 107 LSNNNFS-GEIPAAISSLVSLRVLKLDGNMFQWSIPPGLLNCQSLVTVDLSMNQLNGSLPDGFGAAFPKLKSLNLAGNEI 185 (815)
Q Consensus 107 Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~L~~N~l 185 (815)
+..|++. .-+|..+..|..|+.||||+|+++ ..|..+.+.+++-.|+||+|+|. +||..+|..+..|-.|+|++|++
T Consensus 85 ~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLfLDLS~NrL 162 (1255)
T KOG0444|consen 85 VRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE-TIPNSLFINLTDLLFLDLSNNRL 162 (1255)
T ss_pred hhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccc-cCCchHHHhhHhHhhhccccchh
Confidence 9999985 346788889999999999999999 78999999999999999999998 99999999999999999999999
Q ss_pred cCCCCCCCCCCCCCeEeccCCcCCCcchhhh--hcccceeeeccccccCcccccccccccCCccceEEEcCCCccCcchh
Q 003504 186 KGRDTHFAGLKSITNLNISGNLFQGSVMGVF--LESLEVIDLRSNQFQGHISQVQFNSSYNWSRLVYVDLSENQLSGEIF 263 (815)
Q Consensus 186 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~--l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 263 (815)
..+|+....|..|++|.|++|.+.......+ +++|+.|.+++.+=+ ...++ .++..+.+|..+|+|.|.+. ..|
T Consensus 163 e~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRT--l~N~P-tsld~l~NL~dvDlS~N~Lp-~vP 238 (1255)
T KOG0444|consen 163 EMLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRT--LDNIP-TSLDDLHNLRDVDLSENNLP-IVP 238 (1255)
T ss_pred hhcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccch--hhcCC-CchhhhhhhhhccccccCCC-cch
Confidence 9999999999999999999998754332222 444555555444321 11111 11223344444555555544 344
Q ss_pred hccccCCCCCEEEecCCcCcCCC----------------------ccccccccCCCeEecCCCcCc-CCCchhhhcCCCC
Q 003504 264 HNFSQAQNLKHLSLAYNRFTRQE----------------------FPQIGTLLGLEHLNLSRTSLI-GDIPSEILQLSSL 320 (815)
Q Consensus 264 ~~~~~l~~L~~L~L~~N~l~~~~----------------------~~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L 320 (815)
+.+..+++|+.|+||+|.|+.+. |.++..+++|+.|++.+|++. .-+|+.++.|.+|
T Consensus 239 ecly~l~~LrrLNLS~N~iteL~~~~~~W~~lEtLNlSrNQLt~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~L 318 (1255)
T KOG0444|consen 239 ECLYKLRNLRRLNLSGNKITELNMTEGEWENLETLNLSRNQLTVLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQL 318 (1255)
T ss_pred HHHhhhhhhheeccCcCceeeeeccHHHHhhhhhhccccchhccchHHHhhhHHHHHHHhccCcccccCCccchhhhhhh
Confidence 44444455555555555544433 144444444444554444443 1244445555555
Q ss_pred CEEeCCCCcCCCCCCcc--CCCCccEEEccCCcCcccCChHHhhcCCCCceeeccCCC
Q 003504 321 HTLDLSMNHLTGQIPTV--SAKNLGIIDMSHNNLSGEIPASLLEKLPQMERFNFSYNN 376 (815)
Q Consensus 321 ~~L~ls~N~l~~~~~~~--~~~~L~~L~ls~N~l~~~~p~~~~~~l~~l~~l~l~~N~ 376 (815)
+.+..++|.|. ..|.. .+..|+.|.|++|+|- ++| ..+.-++.|+.||+..|+
T Consensus 319 evf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLP-eaIHlL~~l~vLDlreNp 373 (1255)
T KOG0444|consen 319 EVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLP-EAIHLLPDLKVLDLRENP 373 (1255)
T ss_pred HHHHhhccccc-cCchhhhhhHHHHHhccccccee-ech-hhhhhcCCcceeeccCCc
Confidence 55555555444 22322 4456666667777665 555 345666677777776665
No 365
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=9.1e-33 Score=288.45 Aligned_cols=249 Identities=22% Similarity=0.310 Sum_probs=194.1
Q ss_pred CCCCCCeecccCCeeeEEEEcC-CCcEEEEEEeecC-----CcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEE
Q 003504 509 NFDRGTLLAEGKFGPVYRGFLP-GGIHVAVKVLVHG-----STLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAI 582 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~l~~~-----~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv 582 (815)
+|.+.+.||+|+||.||+|... .+..+++|.++.. .......+.+|+.++++++||||+++++++.+....++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 4778899999999999999854 3444666655431 122334577899999999999999999999998899999
Q ss_pred EEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecc
Q 003504 583 YDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRD 662 (815)
Q Consensus 583 ~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrD 662 (815)
|||+++++|.++++... .....+++..+..++.|++.||.||| +.+++|+|
T Consensus 81 ~e~~~~~~l~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~h~~ 131 (260)
T cd08222 81 TEYCEGRDLDCKLEELK--------------------------HTGKTLSENQVCEWFIQLLLGVHYMH---QRRILHRD 131 (260)
T ss_pred EEeCCCCCHHHHHHHHh--------------------------hcccccCHHHHHHHHHHHHHHHHHHH---HcCccccC
Confidence 99999999999986421 12346889999999999999999999 89999999
Q ss_pred CCCCceEEcCCCCeeecccccceecCCCC-ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCC
Q 003504 663 IKASSVYLDMNLEPRLSDFGLAKIFGNGL-DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDD 741 (815)
Q Consensus 663 lk~~NIll~~~~~~kl~Dfgla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~ 741 (815)
|+|+||+++. +.+||+|||+++...... ......|+..|+|||...... ++.++||||||+++|++++|..||...
T Consensus 132 l~~~nili~~-~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~--~~~~~Dv~slG~~~~~l~~~~~~~~~~ 208 (260)
T cd08222 132 LKAKNIFLKN-NLLKIGDFGVSRLLMGSCDLATTFTGTPYYMSPEALKHQG--YDSKSDIWSLGCILYEMCCLAHAFEGQ 208 (260)
T ss_pred CChhheEeec-CCEeecccCceeecCCCcccccCCCCCcCccCHHHHccCC--CCchhhHHHHHHHHHHHHhCCCCCCCc
Confidence 9999999985 569999999998764332 223345788999999886554 678999999999999999999998632
Q ss_pred CCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 742 YPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 742 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
. ........... .....+...+.++.+++.+||..+|++||++.++++
T Consensus 209 ~-------~~~~~~~~~~~----------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 209 N-------FLSVVLRIVEG----------PTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred c-------HHHHHHHHHcC----------CCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 1 11212211111 011124456678999999999999999999999975
No 366
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=6e-33 Score=293.12 Aligned_cols=246 Identities=22% Similarity=0.317 Sum_probs=198.9
Q ss_pred cCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCC---cccHHHHHHHHHHhcCCC-CCCceeeeeEEEeCCeeEEE
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGS---TLTDQEAARELEYLGRIK-HPNLVPLTGYCIAGDQRIAI 582 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lv 582 (815)
++|...+.||+|+||.||+|+. .++..||+|++.... ....+.+.+|++++++++ ||||+++++++...+..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 3688889999999999999996 478999999986532 223457889999999998 99999999999999999999
Q ss_pred EEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecc
Q 003504 583 YDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRD 662 (815)
Q Consensus 583 ~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrD 662 (815)
|||+++++|.+++.. ...+++.....|+.|++.||+||| +.+++|+|
T Consensus 81 ~e~~~~~~L~~~l~~------------------------------~~~l~~~~~~~i~~ql~~~l~~Lh---~~~~~H~d 127 (280)
T cd05581 81 LEYAPNGELLQYIRK------------------------------YGSLDEKCTRFYAAEILLALEYLH---SKGIIHRD 127 (280)
T ss_pred EcCCCCCcHHHHHHH------------------------------cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecC
Confidence 999999999999965 225889999999999999999999 88999999
Q ss_pred CCCCceEEcCCCCeeecccccceecCCCCc---------------------cccccccccccCCcccCCCCCCCCCcCcc
Q 003504 663 IKASSVYLDMNLEPRLSDFGLAKIFGNGLD---------------------EEIARGSPGYIPPEFAQPDSDFPTPKSDV 721 (815)
Q Consensus 663 lk~~NIll~~~~~~kl~Dfgla~~~~~~~~---------------------~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv 721 (815)
|+|+||+++.++.++++|||++........ .....|+..|+|||...... ++.++||
T Consensus 128 l~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~--~~~~~Di 205 (280)
T cd05581 128 LKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKP--AGKSSDL 205 (280)
T ss_pred CCHHHeEECCCCCEEecCCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCC--CChhhhH
Confidence 999999999999999999999886543221 12234788999999887655 6889999
Q ss_pred hhHHHHHHHHHhCCCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCH
Q 003504 722 YCYGVVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSM 801 (815)
Q Consensus 722 ~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~ 801 (815)
||||++++|+++|+.||..... .......... ....+...+..+.+++.+||..+|++||++
T Consensus 206 ~slG~~l~~l~~g~~p~~~~~~-------~~~~~~~~~~-----------~~~~~~~~~~~~~~li~~~l~~~p~~R~~~ 267 (280)
T cd05581 206 WALGCIIYQMLTGKPPFRGSNE-------YLTFQKILKL-----------EYSFPPNFPPDAKDLIEKLLVLDPQDRLGV 267 (280)
T ss_pred HHHHHHHHHHHhCCCCCCCccH-------HHHHHHHHhc-----------CCCCCCccCHHHHHHHHHHhcCCHhhCCCc
Confidence 9999999999999999975321 1111111111 111233446678999999999999999999
Q ss_pred ----HHHHH
Q 003504 802 ----QQIVG 806 (815)
Q Consensus 802 ----~~v~~ 806 (815)
+++++
T Consensus 268 ~~~~~~ll~ 276 (280)
T cd05581 268 NEGYDELKA 276 (280)
T ss_pred ccCHHHHhc
Confidence 77654
No 367
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=9e-33 Score=300.27 Aligned_cols=263 Identities=21% Similarity=0.254 Sum_probs=191.5
Q ss_pred cCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCceeeeeEEEeC----------
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAG---------- 576 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~---------- 576 (815)
.+|...+.||.|+||.||+|.. .++..||+|.+........+.+.+|++++++++||||+++++++...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS 84 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence 5788899999999999999995 56889999998765555566788999999999999999999876653
Q ss_pred ----CeeEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhc
Q 003504 577 ----DQRIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHH 652 (815)
Q Consensus 577 ----~~~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~ 652 (815)
...++|+||++ ++|.+++.. ..+++.....++.|++.||.|||
T Consensus 85 ~~~~~~~~lv~e~~~-~~L~~~~~~-------------------------------~~l~~~~~~~~~~qi~~aL~~LH- 131 (342)
T cd07854 85 LTELNSVYIVQEYME-TDLANVLEQ-------------------------------GPLSEEHARLFMYQLLRGLKYIH- 131 (342)
T ss_pred ccccceEEEEeeccc-ccHHHHHHc-------------------------------CCCCHHHHHHHHHHHHHHHHHHH-
Confidence 35789999998 588888753 13677888899999999999999
Q ss_pred CCCCCeeeccCCCCceEEc-CCCCeeecccccceecCCCC----ccccccccccccCCcccCCCCCCCCCcCcchhHHHH
Q 003504 653 GCSPPIIHRDIKASSVYLD-MNLEPRLSDFGLAKIFGNGL----DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVV 727 (815)
Q Consensus 653 ~~~~~ivHrDlk~~NIll~-~~~~~kl~Dfgla~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvv 727 (815)
+.+|+||||||+||+++ +++.+||+|||+++...... ......|+..|+|||.+..... ++.++|||||||+
T Consensus 132 --~~givH~dikp~Nili~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~~DiwSlGvi 208 (342)
T cd07854 132 --SANVLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNN-YTKAIDMWAAGCI 208 (342)
T ss_pred --hCCcccCCCCHHHEEEcCCCceEEECCcccceecCCccccccccccccccccccCHHHHhCccc-cCchhhHHHHHHH
Confidence 78999999999999998 45678999999998654221 1122357889999998754332 6789999999999
Q ss_pred HHHHHhCCCCCCCCCCccccccHHH--------HHHHHHhc---CCCCcccccccc-CCCCHHHHHHHHHHHhhccccCC
Q 003504 728 LLELITGKKPLGDDYPEEKEGNLVS--------WVRGLVRN---NKGSRAIDPKIR-DTGPEKQMEEALKIGYLCTADLP 795 (815)
Q Consensus 728 l~el~tg~~p~~~~~~~~~~~~~~~--------~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~Cl~~dP 795 (815)
+|||++|+.||....+.+......+ ........ ........+... .........++.+++.+|+..||
T Consensus 209 l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP 288 (342)
T cd07854 209 FAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNP 288 (342)
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCc
Confidence 9999999999975432111100000 00000000 000000000000 00011234678899999999999
Q ss_pred CCCCCHHHHHH
Q 003504 796 LKRPSMQQIVG 806 (815)
Q Consensus 796 ~~RPs~~~v~~ 806 (815)
++||+++++++
T Consensus 289 ~~R~t~~ell~ 299 (342)
T cd07854 289 MDRLTAEEALM 299 (342)
T ss_pred hhccCHHHHhC
Confidence 99999999974
No 368
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=1.7e-32 Score=296.95 Aligned_cols=262 Identities=20% Similarity=0.223 Sum_probs=189.6
Q ss_pred CCCCCCeecccCCeeeEEEEcC-C--CcEEEEEEeecC--CcccHHHHHHHHHHhcCC-CCCCceeeeeEEEeC----Ce
Q 003504 509 NFDRGTLLAEGKFGPVYRGFLP-G--GIHVAVKVLVHG--STLTDQEAARELEYLGRI-KHPNLVPLTGYCIAG----DQ 578 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~~-~--~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~----~~ 578 (815)
+|++.+.||+|+||.||+|... . +..||+|.+... .....+.+.+|+++++++ +||||+++++++... ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 4677789999999999999954 3 778999998642 222345678899999999 599999999976543 34
Q ss_pred eEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCe
Q 003504 579 RIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPI 658 (815)
Q Consensus 579 ~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~i 658 (815)
.++++||+. ++|.+++.. ...+++..+..++.|++.||+||| ..++
T Consensus 81 ~~~~~e~~~-~~L~~~l~~------------------------------~~~~~~~~~~~~~~qi~~aL~~LH---~~gi 126 (332)
T cd07857 81 LYLYEELME-ADLHQIIRS------------------------------GQPLTDAHFQSFIYQILCGLKYIH---SANV 126 (332)
T ss_pred EEEEEeccc-CCHHHHHhc------------------------------CCCCCHHHHHHHHHHHHHHHHHHH---hCCc
Confidence 678888886 589888854 235788899999999999999999 8899
Q ss_pred eeccCCCCceEEcCCCCeeecccccceecCCCCc-----cccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh
Q 003504 659 IHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLD-----EEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT 733 (815)
Q Consensus 659 vHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t 733 (815)
+||||||+||+++.++.+||+|||+++....... .....|+..|+|||.+.+... ++.++|||||||++|++++
T Consensus 127 vH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~~Di~slGv~l~~l~~ 205 (332)
T cd07857 127 LHRDLKPGNLLVNADCELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQS-YTKAIDVWSVGCILAELLG 205 (332)
T ss_pred ccCCCCHHHeEEcCCCCEEeCcCCCceecccccccccccccCcccCccccCcHHHhCCCC-CCcHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999986543221 123458999999998765332 6889999999999999999
Q ss_pred CCCCCCCCCCccccccHHH--------HHHHHHhcC------CCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCC
Q 003504 734 GKKPLGDDYPEEKEGNLVS--------WVRGLVRNN------KGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRP 799 (815)
Q Consensus 734 g~~p~~~~~~~~~~~~~~~--------~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP 799 (815)
|+.||...........+.. +........ .....-...+.. ........+.+++.+|++.||++||
T Consensus 206 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~R~ 284 (332)
T cd07857 206 RKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFES-IFPNANPLALDLLEKLLAFDPTKRI 284 (332)
T ss_pred CCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHh-hCCCCCHHHHHHHHHHccCCcccCC
Confidence 9999875332111111000 000000000 000000000000 0112356789999999999999999
Q ss_pred CHHHHHH
Q 003504 800 SMQQIVG 806 (815)
Q Consensus 800 s~~~v~~ 806 (815)
++.++++
T Consensus 285 t~~~ll~ 291 (332)
T cd07857 285 SVEEALE 291 (332)
T ss_pred CHHHHhc
Confidence 9999864
No 369
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=4.3e-32 Score=295.17 Aligned_cols=268 Identities=20% Similarity=0.242 Sum_probs=196.4
Q ss_pred HHHHHHHhcCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCC--cccHHHHHHHHHHhcCCCCCCceeeeeEEEeC
Q 003504 500 FADLLSATSNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGS--TLTDQEAARELEYLGRIKHPNLVPLTGYCIAG 576 (815)
Q Consensus 500 ~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~ 576 (815)
..++...+++|+..+.||+|+||.||+|.. .++..||+|++.... ....+.+.+|+.++.+++||||+++++++...
T Consensus 9 ~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~ 88 (345)
T cd07877 9 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA 88 (345)
T ss_pred HHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeec
Confidence 345666788999999999999999999984 578899999986532 22345678899999999999999999988643
Q ss_pred ------CeeEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHH
Q 003504 577 ------DQRIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFL 650 (815)
Q Consensus 577 ------~~~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yL 650 (815)
...+++++++ +++|.+++.. ..+++..+..++.|+++||+||
T Consensus 89 ~~~~~~~~~~lv~~~~-~~~L~~~~~~-------------------------------~~l~~~~~~~i~~qi~~aL~~L 136 (345)
T cd07877 89 RSLEEFNDVYLVTHLM-GADLNNIVKC-------------------------------QKLTDDHVQFLIYQILRGLKYI 136 (345)
T ss_pred ccccccccEEEEehhc-ccCHHHHHhc-------------------------------CCCCHHHHHHHHHHHHHHHHHH
Confidence 2356777776 7799887753 2467888999999999999999
Q ss_pred hcCCCCCeeeccCCCCceEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHH
Q 003504 651 HHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLE 730 (815)
Q Consensus 651 H~~~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~e 730 (815)
| +.+|+||||||+||++++++.+||+|||+++..... .....|+..|+|||.+.+... ++.++|||||||++||
T Consensus 137 H---~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~-~~~~~DvwslG~il~e 210 (345)
T cd07877 137 H---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGYVATRWYRAPEIMLNWMH-YNQTVDIWSVGCIMAE 210 (345)
T ss_pred H---HCCeeecCCChHHEEEcCCCCEEEeccccccccccc--ccccccCCCccCHHHHhCccC-CCchhhHHHHHHHHHH
Confidence 9 889999999999999999999999999999865432 233457899999998765332 6889999999999999
Q ss_pred HHhCCCCCCCCCCccccccHHHHHH----HHH---hcCCC-------CccccccccCCCCHHHHHHHHHHHhhccccCCC
Q 003504 731 LITGKKPLGDDYPEEKEGNLVSWVR----GLV---RNNKG-------SRAIDPKIRDTGPEKQMEEALKIGYLCTADLPL 796 (815)
Q Consensus 731 l~tg~~p~~~~~~~~~~~~~~~~~~----~~~---~~~~~-------~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~ 796 (815)
+++|+.||...........+..... ... ..... ......... ........++.+++.+|+..||.
T Consensus 211 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dp~ 289 (345)
T cd07877 211 LLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSD 289 (345)
T ss_pred HHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchh-hhcCCCCHHHHHHHHHHcCCChh
Confidence 9999999964322111111111000 000 00000 000000000 00012345688999999999999
Q ss_pred CCCCHHHHHH
Q 003504 797 KRPSMQQIVG 806 (815)
Q Consensus 797 ~RPs~~~v~~ 806 (815)
+||++.+++.
T Consensus 290 ~R~t~~e~l~ 299 (345)
T cd07877 290 KRITAAQALA 299 (345)
T ss_pred hcCCHHHHhc
Confidence 9999999875
No 370
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-34 Score=318.48 Aligned_cols=257 Identities=23% Similarity=0.232 Sum_probs=199.3
Q ss_pred HHHHHHhcCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCC---cccHHHHHHHHHHhcCCCCCCceeeeeEEEeC
Q 003504 501 ADLLSATSNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGS---TLTDQEAARELEYLGRIKHPNLVPLTGYCIAG 576 (815)
Q Consensus 501 ~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~ 576 (815)
.++....++|++.++||+|+||.|..+++ .+++.+|+|++++.. ..+..-|..|-++|..-+.+.|+++...|.+.
T Consensus 68 ~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~ 147 (1317)
T KOG0612|consen 68 KELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDE 147 (1317)
T ss_pred HHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCc
Confidence 45555678899999999999999999996 467889999998742 33445688999999999999999999999999
Q ss_pred CeeEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCC
Q 003504 577 DQRIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSP 656 (815)
Q Consensus 577 ~~~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~ 656 (815)
.+.|+|||||+||+|-.+|... + .++.....-.+..|.-||.-|| +.
T Consensus 148 ~~LYlVMdY~pGGDlltLlSk~-----------------------------~-~~pE~~ArFY~aEiVlAldslH---~m 194 (1317)
T KOG0612|consen 148 RYLYLVMDYMPGGDLLTLLSKF-----------------------------D-RLPEDWARFYTAEIVLALDSLH---SM 194 (1317)
T ss_pred cceEEEEecccCchHHHHHhhc-----------------------------C-CChHHHHHHHHHHHHHHHHHHH---hc
Confidence 9999999999999999999652 2 2333334456677889999999 89
Q ss_pred CeeeccCCCCceEEcCCCCeeecccccceecCCCC--ccccccccccccCCcccCCC---CCCCCCcCcchhHHHHHHHH
Q 003504 657 PIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGL--DEEIARGSPGYIPPEFAQPD---SDFPTPKSDVYCYGVVLLEL 731 (815)
Q Consensus 657 ~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~--~~~~~~gt~~y~aPE~~~~~---~~~~~~~~Dv~S~Gvvl~el 731 (815)
|+|||||||+|||+|..|++|++|||.+-.+..+. .....+|||.|++||++... .+.|+..+|+||+||++|||
T Consensus 195 gyVHRDiKPDNvLld~~GHikLADFGsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEM 274 (1317)
T KOG0612|consen 195 GYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEM 274 (1317)
T ss_pred cceeccCCcceeEecccCcEeeccchhHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHH
Confidence 99999999999999999999999999988776433 45677899999999987643 25589999999999999999
Q ss_pred HhCCCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCC---HHHHH
Q 003504 732 ITGKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPS---MQQIV 805 (815)
Q Consensus 732 ~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs---~~~v~ 805 (815)
+.|..||..+.--+.++.+..+ ...... + .....+++..+++.+.+. +|+.|-. .+++.
T Consensus 275 lyG~TPFYadslveTY~KIm~h-------k~~l~F-----P--~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik 336 (1317)
T KOG0612|consen 275 LYGETPFYADSLVETYGKIMNH-------KESLSF-----P--DETDVSEEAKDLIEALLC-DREVRLGRNGIEDIK 336 (1317)
T ss_pred HcCCCcchHHHHHHHHHHHhch-------hhhcCC-----C--cccccCHHHHHHHHHHhc-ChhhhcccccHHHHH
Confidence 9999999854433444444432 111101 0 012255667777776655 5777776 66553
No 371
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.98 E-value=1.3e-32 Score=268.68 Aligned_cols=266 Identities=21% Similarity=0.299 Sum_probs=205.8
Q ss_pred CHHHHHHHhcCCCCCCeecccCCeeeEEEE-cCCCcEEEEEEeecCCcccHHHHHHHHHHhcCCC-CCCceeeeeEEEeC
Q 003504 499 TFADLLSATSNFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIK-HPNLVPLTGYCIAG 576 (815)
Q Consensus 499 ~~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~ 576 (815)
+++|+..-|+ +.+|+|+|+.|--++ +.+|..+|||++.+........+.+|++++...+ |+||++++.++++.
T Consensus 74 ~F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd 148 (463)
T KOG0607|consen 74 KFEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDD 148 (463)
T ss_pred hHHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhccc
Confidence 4667766663 799999999999988 7889999999998765555678889999999985 99999999999999
Q ss_pred CeeEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCC
Q 003504 577 DQRIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSP 656 (815)
Q Consensus 577 ~~~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~ 656 (815)
...|+|||-|.+|.|..++++. .-++....-++..+||.||.||| .+
T Consensus 149 ~~FYLVfEKm~GGplLshI~~~------------------------------~~F~E~EAs~vvkdia~aLdFlH---~k 195 (463)
T KOG0607|consen 149 TRFYLVFEKMRGGPLLSHIQKR------------------------------KHFNEREASRVVKDIASALDFLH---TK 195 (463)
T ss_pred ceEEEEEecccCchHHHHHHHh------------------------------hhccHHHHHHHHHHHHHHHHHHh---hc
Confidence 9999999999999999999863 34566677889999999999999 89
Q ss_pred CeeeccCCCCceEEcCCCC---eeecccccceecCCC--------CccccccccccccCCccc---CCCCCCCCCcCcch
Q 003504 657 PIIHRDIKASSVYLDMNLE---PRLSDFGLAKIFGNG--------LDEEIARGSPGYIPPEFA---QPDSDFPTPKSDVY 722 (815)
Q Consensus 657 ~ivHrDlk~~NIll~~~~~---~kl~Dfgla~~~~~~--------~~~~~~~gt~~y~aPE~~---~~~~~~~~~~~Dv~ 722 (815)
+|.|||+||+|||-..-.. +||+||.++.-.... ....+.+|+..|||||+. .+...+|+.++|.|
T Consensus 196 gIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlw 275 (463)
T KOG0607|consen 196 GIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLW 275 (463)
T ss_pred CcccccCCccceeecCCCCcCceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHH
Confidence 9999999999999865433 799999887543211 122344688899999974 34445689999999
Q ss_pred hHHHHHHHHHhCCCCCCCCCCcc---ccccHHHHHHHHHhcCCCCccccccc--cCCCCHHHHHHHHHHHhhccccCCCC
Q 003504 723 CYGVVLLELITGKKPLGDDYPEE---KEGNLVSWVRGLVRNNKGSRAIDPKI--RDTGPEKQMEEALKIGYLCTADLPLK 797 (815)
Q Consensus 723 S~Gvvl~el~tg~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~Cl~~dP~~ 797 (815)
|+|||+|-|+.|.+||.+...++ ..+.....++..+-+.. -+..+ ...-+...+.+.-+++...+..||.+
T Consensus 276 SLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesI----QEGkYeFPdkdWahIS~eakdlisnLlvrda~~ 351 (463)
T KOG0607|consen 276 SLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESI----QEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQ 351 (463)
T ss_pred HHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHH----hccCCcCChhhhHHhhHHHHHHHHHHHhccHHh
Confidence 99999999999999999854432 22333333333322210 01111 11113456778889999999999999
Q ss_pred CCCHHHHHH
Q 003504 798 RPSMQQIVG 806 (815)
Q Consensus 798 RPs~~~v~~ 806 (815)
|-++.+++.
T Consensus 352 rlsa~~vln 360 (463)
T KOG0607|consen 352 RLSAAQVLN 360 (463)
T ss_pred hhhhhhccC
Confidence 999998875
No 372
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.98 E-value=4.1e-32 Score=281.69 Aligned_cols=235 Identities=27% Similarity=0.301 Sum_probs=191.0
Q ss_pred ecccCCeeeEEEEcC-CCcEEEEEEeecCCcc---cHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeCCCCCh
Q 003504 516 LAEGKFGPVYRGFLP-GGIHVAVKVLVHGSTL---TDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNL 591 (815)
Q Consensus 516 ig~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL 591 (815)
||+|+||.||++... ++..+|+|.+...... ....+.+|++++++++||||+++++.+..+...++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 689999999999964 5889999998764332 345788999999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCceEEc
Q 003504 592 QNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLD 671 (815)
Q Consensus 592 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NIll~ 671 (815)
.+++.. ...+++.....++.|++.||.||| +.+++|+||+|+||+++
T Consensus 81 ~~~l~~------------------------------~~~l~~~~~~~~~~qi~~~l~~lh---~~~~~H~~l~p~ni~~~ 127 (250)
T cd05123 81 FSHLSK------------------------------EGRFSEERARFYAAEIVLALEYLH---SLGIIYRDLKPENILLD 127 (250)
T ss_pred HHHHHh------------------------------cCCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcceEEEc
Confidence 999964 224788889999999999999999 79999999999999999
Q ss_pred CCCCeeecccccceecCCC-CccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCccccccH
Q 003504 672 MNLEPRLSDFGLAKIFGNG-LDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNL 750 (815)
Q Consensus 672 ~~~~~kl~Dfgla~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~ 750 (815)
.++.++|+|||.+...... .......++..|+|||...+.. .+.++|+||||+++||+++|+.||.....
T Consensus 128 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~--~~~~~D~~slG~~~~~l~~g~~p~~~~~~------- 198 (250)
T cd05123 128 ADGHIKLTDFGLAKELSSEGSRTNTFCGTPEYLAPEVLLGKG--YGKAVDWWSLGVLLYEMLTGKPPFYAEDR------- 198 (250)
T ss_pred CCCcEEEeecCcceecccCCCcccCCcCCccccChHHhCCCC--CCchhhHHHHHHHHHHHHHCCCCCCCCCH-------
Confidence 9999999999999876543 2233456888999999987655 68899999999999999999999964321
Q ss_pred HHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHH
Q 003504 751 VSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQ 803 (815)
Q Consensus 751 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~ 803 (815)
.......... ....+...+..+.+++.+||..||++||++++
T Consensus 199 ~~~~~~~~~~-----------~~~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 199 KEIYEKILKD-----------PLRFPEFLSPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred HHHHHHHhcC-----------CCCCCCCCCHHHHHHHHHHhcCCHhhCCCccc
Confidence 1111111110 01112333567889999999999999999954
No 373
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.98 E-value=6.8e-32 Score=293.37 Aligned_cols=262 Identities=20% Similarity=0.236 Sum_probs=194.1
Q ss_pred HhcCCCCCCeecccCCeeeEEEE-cCCCcEEEEEEeecCCc--ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCC-----
Q 003504 506 ATSNFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHGST--LTDQEAARELEYLGRIKHPNLVPLTGYCIAGD----- 577 (815)
Q Consensus 506 ~~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~----- 577 (815)
..++|+..+.||+|+||.||+|. ..++..||||++..... .....+.+|++++++++||||+++++++....
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF 92 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence 45679999999999999999998 45789999999854322 22356789999999999999999999987643
Q ss_pred -eeEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCC
Q 003504 578 -QRIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSP 656 (815)
Q Consensus 578 -~~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~ 656 (815)
..++||||+ +++|.+++.. ..+++.....++.|+++||+||| +.
T Consensus 93 ~~~~lv~e~~-~~~l~~~~~~-------------------------------~~l~~~~~~~i~~qi~~al~~LH---~~ 137 (343)
T cd07880 93 HDFYLVMPFM-GTDLGKLMKH-------------------------------EKLSEDRIQFLVYQMLKGLKYIH---AA 137 (343)
T ss_pred ceEEEEEecC-CCCHHHHHhc-------------------------------CCCCHHHHHHHHHHHHHHHHHHH---hC
Confidence 358999999 6688888753 24678889999999999999999 89
Q ss_pred CeeeccCCCCceEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCC
Q 003504 657 PIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKK 736 (815)
Q Consensus 657 ~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~ 736 (815)
+|+||||||+||+++.++.+||+|||++...... .....+++.|+|||.+.+... ++.++|||||||++|++++|+.
T Consensus 138 gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~-~~~~~Di~slG~ll~~l~~g~~ 214 (343)
T cd07880 138 GIIHRDLKPGNLAVNEDCELKILDFGLARQTDSE--MTGYVVTRWYRAPEVILNWMH-YTQTVDIWSVGCIMAEMLTGKP 214 (343)
T ss_pred CeecCCCCHHHEEEcCCCCEEEeecccccccccC--ccccccCCcccCHHHHhCCCC-CCcHHHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999999865432 233457889999998865332 6889999999999999999999
Q ss_pred CCCCCCCccccccHH--------HHHHHHHhcC------CCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHH
Q 003504 737 PLGDDYPEEKEGNLV--------SWVRGLVRNN------KGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQ 802 (815)
Q Consensus 737 p~~~~~~~~~~~~~~--------~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ 802 (815)
||...........+. .+...+.... .......+.+. ........++.+++.+|+..||++||++.
T Consensus 215 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~dP~~R~t~~ 293 (343)
T cd07880 215 LFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFR-SLLPNANPLAVNVLEKMLVLDAESRITAA 293 (343)
T ss_pred CCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHH-HhccCCChHHHHHHHHHcCCChhhCCCHH
Confidence 997533211110100 0000000000 00000000000 00123345688999999999999999999
Q ss_pred HHHH
Q 003504 803 QIVG 806 (815)
Q Consensus 803 ~v~~ 806 (815)
++++
T Consensus 294 ~~l~ 297 (343)
T cd07880 294 EALA 297 (343)
T ss_pred HHhc
Confidence 9983
No 374
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.98 E-value=1.8e-32 Score=298.05 Aligned_cols=261 Identities=19% Similarity=0.253 Sum_probs=194.4
Q ss_pred hcCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCC--cccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCe-----
Q 003504 507 TSNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGS--TLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQ----- 578 (815)
Q Consensus 507 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~----- 578 (815)
.++|+..+.||+|+||.||+|.. .++..||||++.... ....+.+.+|+.++++++|||++++++++...+.
T Consensus 14 ~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 93 (343)
T cd07851 14 PDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQ 93 (343)
T ss_pred cCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccc
Confidence 56788899999999999999996 467899999886431 2233567789999999999999999998876554
Q ss_pred -eEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCC
Q 003504 579 -RIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPP 657 (815)
Q Consensus 579 -~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ 657 (815)
.++|+||+ +++|.+++.. ..+++.....++.|+++||+||| +.+
T Consensus 94 ~~~lv~e~~-~~~L~~~~~~-------------------------------~~l~~~~~~~~~~ql~~aL~~LH---~~g 138 (343)
T cd07851 94 DVYLVTHLM-GADLNNIVKC-------------------------------QKLSDDHIQFLVYQILRGLKYIH---SAG 138 (343)
T ss_pred cEEEEEecC-CCCHHHHHhc-------------------------------CCCCHHHHHHHHHHHHHHHHHHH---HCC
Confidence 89999998 5699888853 24788889999999999999999 889
Q ss_pred eeeccCCCCceEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCC
Q 003504 658 IIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKP 737 (815)
Q Consensus 658 ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p 737 (815)
|+||||||+||+++.++.+||+|||++...... .....++..|+|||.+.+.. .++.++|||||||++||+++|+.|
T Consensus 139 i~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~--~~~~~~~~~y~aPE~~~~~~-~~~~~~DvwslGv~l~elltg~~p 215 (343)
T cd07851 139 IIHRDLKPSNIAVNEDCELKILDFGLARHTDDE--MTGYVATRWYRAPEIMLNWM-HYNQTVDIWSVGCIMAELLTGKTL 215 (343)
T ss_pred eecCCCCHHHeEECCCCCEEEcccccccccccc--ccCCcccccccCHHHHhCCC-CCCchHhHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999999999876433 23345788999999876533 268899999999999999999999
Q ss_pred CCCCCCccccccHHHH--------HHHHHhcCC------CCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHH
Q 003504 738 LGDDYPEEKEGNLVSW--------VRGLVRNNK------GSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQ 803 (815)
Q Consensus 738 ~~~~~~~~~~~~~~~~--------~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~ 803 (815)
|......+....+... ......... ......+.+.. .....+.++.+++.+|+..+|++||++.+
T Consensus 216 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~l~dli~~~l~~~P~~Rpt~~e 294 (343)
T cd07851 216 FPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKE-VFSGANPLAIDLLEKMLVLDPDKRITAAE 294 (343)
T ss_pred CCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHH-HhccCCHHHHHHHHHhCCCChhhCCCHHH
Confidence 9753322111111100 000000000 00000000000 01123567899999999999999999999
Q ss_pred HHH
Q 003504 804 IVG 806 (815)
Q Consensus 804 v~~ 806 (815)
|++
T Consensus 295 ll~ 297 (343)
T cd07851 295 ALA 297 (343)
T ss_pred Hhc
Confidence 875
No 375
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.98 E-value=3.2e-32 Score=299.05 Aligned_cols=262 Identities=26% Similarity=0.414 Sum_probs=217.0
Q ss_pred cCHHHHHHHhcCCCCCCeecccCCeeeEEEE-cCCCcEEEEEEeecCCcccHHHHHHHHHHhcCC-CCCCceeeeeEEEe
Q 003504 498 ITFADLLSATSNFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHGSTLTDQEAARELEYLGRI-KHPNLVPLTGYCIA 575 (815)
Q Consensus 498 ~~~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~ 575 (815)
+.++.+...++.|++.++||.|.+|.||+++ .++++.+|||++.. .....++++.|.++++.. .|||++.++|++.-
T Consensus 9 ~~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~-~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k 87 (953)
T KOG0587|consen 9 IDLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDP-TEDEEEEIELEYNMLKKYSHHPNVATFYGAFIK 87 (953)
T ss_pred cchhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecC-CccccHHHHHHHHHHHhccCCCCcceEEEEEEE
Confidence 3444455567789999999999999999999 56788999998765 455667888999999988 59999999999874
Q ss_pred -----CCeeEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHH
Q 003504 576 -----GDQRIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFL 650 (815)
Q Consensus 576 -----~~~~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yL 650 (815)
+++.|+|||||.+||..+++.... +..+.|....-|++.+..|+.+|
T Consensus 88 ~~~~~~DqLWLVMEfC~gGSVTDLVKn~~----------------------------g~rl~E~~IaYI~re~lrgl~HL 139 (953)
T KOG0587|consen 88 KDPGNGDQLWLVMEFCGGGSVTDLVKNTK----------------------------GNRLKEEWIAYILREILRGLAHL 139 (953)
T ss_pred ecCCCCCeEEEEeeccCCccHHHHHhhhc----------------------------ccchhhHHHHHHHHHHHHHHHHH
Confidence 568999999999999999997631 55788999999999999999999
Q ss_pred hcCCCCCeeeccCCCCceEEcCCCCeeecccccceecCCCC-ccccccccccccCCcccCCCCC---CCCCcCcchhHHH
Q 003504 651 HHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGL-DEEIARGSPGYIPPEFAQPDSD---FPTPKSDVYCYGV 726 (815)
Q Consensus 651 H~~~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~---~~~~~~Dv~S~Gv 726 (815)
| ...++|||||-.|||+++++.+|+.|||++..+..+. ...+..||+.|||||++..... .|+.++|+||+|+
T Consensus 140 H---~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGI 216 (953)
T KOG0587|consen 140 H---NNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGI 216 (953)
T ss_pred h---hcceeeecccCceEEEeccCcEEEeeeeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccc
Confidence 9 8899999999999999999999999999998876543 4556779999999999987652 3578999999999
Q ss_pred HHHHHHhCCCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 727 VLLELITGKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 727 vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
+..||--|.+|+.+.-+- +.++ .-.-.|......|....+++.+++..|+.+|-++||++.++++
T Consensus 217 TaIEladG~PPl~DmHPm----------raLF-----~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 217 TAIEMAEGAPPLCDMHPM----------RALF-----LIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred eeehhcCCCCCccCcchh----------hhhc-----cCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 999999999999864331 1111 1112233333457889999999999999999999999999875
No 376
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.98 E-value=1.6e-32 Score=310.69 Aligned_cols=282 Identities=24% Similarity=0.335 Sum_probs=177.4
Q ss_pred HhcCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCC-cccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeE---
Q 003504 506 ATSNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGS-TLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRI--- 580 (815)
Q Consensus 506 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~--- 580 (815)
-..+|++.+.||+||||.|||++. -||+.+|||++.... ......+.+|+..+++++|||||+++..+.+.....
T Consensus 477 Y~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ 556 (1351)
T KOG1035|consen 477 YLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVL 556 (1351)
T ss_pred HhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccc
Confidence 345788889999999999999994 489999999997643 333456889999999999999999998765432111
Q ss_pred ---------------------EEEEeCC--CCChhhhhc---cCCCCC-----------------ccccCC---------
Q 003504 581 ---------------------AIYDYME--NGNLQNLLH---DLPLGV-----------------QTTEDW--------- 608 (815)
Q Consensus 581 ---------------------lv~ey~~--~gsL~~~l~---~~~~~~-----------------~~~~~~--------- 608 (815)
++++-.+ ...+...=. +..... +..++.
T Consensus 557 ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~ 636 (1351)
T KOG1035|consen 557 EIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDS 636 (1351)
T ss_pred cccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccccc
Confidence 1111100 000000000 000000 000000
Q ss_pred -----CCCccccCC-----Cccccc------------------------cCCCCccc-CHHHHHHHHHHHHHHHHHHhcC
Q 003504 609 -----STDTWEEDG-----TNSIQN------------------------VGSEGLLT-TWRFRHKIALGTARALAFLHHG 653 (815)
Q Consensus 609 -----~~~~~~~~~-----~~~~~~------------------------~~~~~~~~-~~~~~~~i~~~ia~~L~yLH~~ 653 (815)
..+..+... .+.... .-..+... .-...++++++|++||+|+|
T Consensus 637 e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH-- 714 (1351)
T KOG1035|consen 637 EGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIH-- 714 (1351)
T ss_pred CCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHH--
Confidence 000001111 111100 00001111 23345789999999999999
Q ss_pred CCCCeeeccCCCCceEEcCCCCeeecccccceecC------------------C-CCccccccccccccCCcccCCCCC-
Q 003504 654 CSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFG------------------N-GLDEEIARGSPGYIPPEFAQPDSD- 713 (815)
Q Consensus 654 ~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~------------------~-~~~~~~~~gt~~y~aPE~~~~~~~- 713 (815)
+++||||||||.||++|++..+||+|||+|+... . ....+..+||.-|+|||++.+...
T Consensus 715 -~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~ 793 (1351)
T KOG1035|consen 715 -DQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSN 793 (1351)
T ss_pred -hCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccc
Confidence 8999999999999999999999999999998721 0 113455679999999999876652
Q ss_pred CCCCcCcchhHHHHHHHHHhCCCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhcccc
Q 003504 714 FPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTAD 793 (815)
Q Consensus 714 ~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~ 793 (815)
.|+.|+|+||+|||++||+. ||+.. .....+.. .++. +.-..+ .....+....-.+++..+++.
T Consensus 794 ~Yn~KiDmYSLGIVlFEM~y---PF~Ts---MERa~iL~----~LR~--g~iP~~----~~f~~~~~~~e~slI~~Ll~h 857 (1351)
T KOG1035|consen 794 KYNSKIDMYSLGIVLFEMLY---PFGTS---MERASILT----NLRK--GSIPEP----ADFFDPEHPEEASLIRWLLSH 857 (1351)
T ss_pred cccchhhhHHHHHHHHHHhc---cCCch---HHHHHHHH----hccc--CCCCCC----cccccccchHHHHHHHHHhcC
Confidence 47999999999999999997 56531 11111111 1111 111111 112333444557899999999
Q ss_pred CCCCCCCHHHHHH
Q 003504 794 LPLKRPSMQQIVG 806 (815)
Q Consensus 794 dP~~RPs~~~v~~ 806 (815)
||.+|||+.|++.
T Consensus 858 dP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 858 DPSKRPTATELLN 870 (1351)
T ss_pred CCccCCCHHHHhh
Confidence 9999999999975
No 377
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.98 E-value=1.2e-32 Score=268.18 Aligned_cols=203 Identities=22% Similarity=0.345 Sum_probs=170.4
Q ss_pred cCCCCCCeecccCCeeeEEEEc---CC--CcEEEEEEeecCCc--ccHHHHHHHHHHhcCCCCCCceeeeeEEEe-CCee
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFL---PG--GIHVAVKVLVHGST--LTDQEAARELEYLGRIKHPNLVPLTGYCIA-GDQR 579 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~---~~--~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~-~~~~ 579 (815)
..|+....||+|.||.||+|+- ++ ...+|+|.+...+. .-.....||+.+++.++||||+.+..++.. +...
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v 103 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKV 103 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceE
Confidence 4688889999999999999963 22 23689999865422 223567899999999999999999999887 6678
Q ss_pred EEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCee
Q 003504 580 IAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPII 659 (815)
Q Consensus 580 ~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~iv 659 (815)
++++||.+. +|...++-... +....+.-....+|+.||..|+.||| +.=|+
T Consensus 104 ~l~fdYAEh-DL~~II~fHr~-------------------------~~~~~lp~~mvKsilwQil~Gv~YLH---~NWvl 154 (438)
T KOG0666|consen 104 WLLFDYAEH-DLWHIIKFHRA-------------------------SKAKQLPRSMVKSILWQILDGVHYLH---SNWVL 154 (438)
T ss_pred EEEehhhhh-hHHHHHHHhcc-------------------------chhccCCHHHHHHHHHHHHhhhHHHh---hhhee
Confidence 999999998 99999975421 22346777888999999999999999 77899
Q ss_pred eccCCCCceEEcCC----CCeeecccccceecCCCC----ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHH
Q 003504 660 HRDIKASSVYLDMN----LEPRLSDFGLAKIFGNGL----DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLEL 731 (815)
Q Consensus 660 HrDlk~~NIll~~~----~~~kl~Dfgla~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el 731 (815)
||||||.||||..+ |.+||+|||+++.+.... .....+-|.+|+|||++.+... |+.+.||||.||++.||
T Consensus 155 HRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~h-YT~AiDvWAiGCIfaEl 233 (438)
T KOG0666|consen 155 HRDLKPANILVMGDGPERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARH-YTKAIDVWAIGCIFAEL 233 (438)
T ss_pred eccCCcceEEEeccCCccCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhccccc-ccchhhhHHHHHHHHHH
Confidence 99999999999888 899999999999886543 3345567999999999998876 79999999999999999
Q ss_pred HhCCCCCCC
Q 003504 732 ITGKKPLGD 740 (815)
Q Consensus 732 ~tg~~p~~~ 740 (815)
+|-++-|.+
T Consensus 234 Ltl~PlF~g 242 (438)
T KOG0666|consen 234 LTLEPLFKG 242 (438)
T ss_pred HccCccccc
Confidence 998887765
No 378
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.98 E-value=1.3e-32 Score=266.84 Aligned_cols=252 Identities=23% Similarity=0.285 Sum_probs=197.2
Q ss_pred hcCCCC-CCeecccCCeeeEEEEc-CCCcEEEEEEeecCCcccHHHHHHHHHHhcCC-CCCCceeeeeEEEeC----Cee
Q 003504 507 TSNFDR-GTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGSTLTDQEAARELEYLGRI-KHPNLVPLTGYCIAG----DQR 579 (815)
Q Consensus 507 ~~~~~~-~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~----~~~ 579 (815)
+++|.+ .++||-|-.|.|-.+.. .+|.++|+|++.+ ....++|++.--+. .|||||.+++++.+. ...
T Consensus 60 tedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~D-----s~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcL 134 (400)
T KOG0604|consen 60 TEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLD-----SPKARREVELHWMASGHPHIVSIIDVYENSYQGRKCL 134 (400)
T ss_pred hhhheehhhhhccccCCceEEEEeccchhhhHHHHHhc-----CHHHHhHhhhhhhhcCCCceEEeehhhhhhccCceee
Confidence 455655 36899999999999884 5788999999865 23457788765544 599999999988752 355
Q ss_pred EEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCee
Q 003504 580 IAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPII 659 (815)
Q Consensus 580 ~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~iv 659 (815)
++|||.|+||.|.+.+++. ....++.+..-.|+.||+.|+.||| +..|.
T Consensus 135 LiVmE~meGGeLfsriq~~----------------------------g~~afTErea~eI~~qI~~Av~~lH---~~nIA 183 (400)
T KOG0604|consen 135 LIVMECMEGGELFSRIQDR----------------------------GDQAFTEREASEIMKQIGLAVRYLH---SMNIA 183 (400)
T ss_pred EeeeecccchHHHHHHHHc----------------------------ccccchHHHHHHHHHHHHHHHHHHH---hcchh
Confidence 7899999999999999863 2456788888999999999999999 89999
Q ss_pred eccCCCCceEEcC---CCCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCC
Q 003504 660 HRDIKASSVYLDM---NLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKK 736 (815)
Q Consensus 660 HrDlk~~NIll~~---~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~ 736 (815)
||||||+|+|... +-.+|++|||+|+.........+.+-|+.|.|||++.... |+..+|+||+||+||-|+.|.+
T Consensus 184 HRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~~~L~TPc~TPyYvaPevlg~eK--ydkscdmwSlgVimYIlLCGyP 261 (400)
T KOG0604|consen 184 HRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEPGDLMTPCFTPYYVAPEVLGPEK--YDKSCDMWSLGVIMYILLCGYP 261 (400)
T ss_pred hccCChhheeeecCCCCcceEecccccccccCCCccccCCcccccccCHHHhCchh--cCCCCCccchhHHHHHhhcCCC
Confidence 9999999999974 4468999999999877555566677899999999998777 7889999999999999999999
Q ss_pred CCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 737 PLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 737 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
||...-....... ++.-++... -.+....+...+++.-++++..++.+|.+|.+.+++..
T Consensus 262 PFYS~hg~aispg----Mk~rI~~gq------y~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 262 PFYSNHGLAISPG----MKRRIRTGQ------YEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMD 321 (400)
T ss_pred cccccCCccCChh----HHhHhhccC------ccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence 9986332211111 111111110 01122234567788899999999999999999999864
No 379
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.98 E-value=2e-32 Score=246.08 Aligned_cols=261 Identities=22% Similarity=0.274 Sum_probs=197.3
Q ss_pred CCCCCCeecccCCeeeEEEE-cCCCcEEEEEEeecC--CcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEe
Q 003504 509 NFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHG--STLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDY 585 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 585 (815)
+|+..+.||+|.||+||+|+ .+++..||+|+++-. +..-.....+|+-+++.++|+|||++++........-+|+||
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 45667899999999999999 566888999998753 334456788999999999999999999999888889999999
Q ss_pred CCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCC
Q 003504 586 MENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKA 665 (815)
Q Consensus 586 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~ 665 (815)
|.. +|..+.... +..++-.....++.|+.+||.|+| ++.+.|||+||
T Consensus 83 cdq-dlkkyfdsl-----------------------------ng~~d~~~~rsfmlqllrgl~fch---shnvlhrdlkp 129 (292)
T KOG0662|consen 83 CDQ-DLKKYFDSL-----------------------------NGDLDPEIVRSFMLQLLRGLGFCH---SHNVLHRDLKP 129 (292)
T ss_pred hhH-HHHHHHHhc-----------------------------CCcCCHHHHHHHHHHHHhhhhhhh---hhhhhhccCCc
Confidence 987 888887653 335677778899999999999999 89999999999
Q ss_pred CceEEcCCCCeeecccccceecCCCC-ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCC
Q 003504 666 SSVYLDMNLEPRLSDFGLAKIFGNGL-DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GKKPLGDDYP 743 (815)
Q Consensus 666 ~NIll~~~~~~kl~Dfgla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~ 743 (815)
.|.||+.+|++|++|||+++.++-.. -....+-|.+|.+|+++.+..- |++..|+||-||++.|+.. |++-|.+...
T Consensus 130 qnllin~ngelkladfglarafgipvrcysaevvtlwyrppdvlfgakl-y~tsidmwsagcifaelanagrplfpg~dv 208 (292)
T KOG0662|consen 130 QNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKL-YSTSIDMWSAGCIFAELANAGRPLFPGNDV 208 (292)
T ss_pred ceEEeccCCcEEecccchhhhcCCceEeeeceeeeeeccCcceeeeeeh-hccchHhhhcchHHHHHhhcCCCCCCCCcH
Confidence 99999999999999999999876443 2344457999999999988764 6889999999999999988 6666665332
Q ss_pred ccccccHHHHHHHH--Hhc-CCC--CccccccccCCCC---------HHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 744 EEKEGNLVSWVRGL--VRN-NKG--SRAIDPKIRDTGP---------EKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 744 ~~~~~~~~~~~~~~--~~~-~~~--~~~~~~~~~~~~~---------~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
..++.+.++.+ ..+ .+. ...-|-......+ +.....-.++.++.+.-+|.+|.++++.++
T Consensus 209 ---ddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalq 282 (292)
T KOG0662|consen 209 ---DDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ 282 (292)
T ss_pred ---HHHHHHHHHHhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence 22333322221 111 111 1111111111111 111233467888889999999999998875
No 380
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=7.5e-33 Score=270.69 Aligned_cols=240 Identities=25% Similarity=0.311 Sum_probs=192.4
Q ss_pred hcCCCCCCeecccCCeeeEEEE-cCCCcEEEEEEeecCCcccHHHH---HHHHHHhcCCCCCCceeeeeEEEeCCeeEEE
Q 003504 507 TSNFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHGSTLTDQEA---ARELEYLGRIKHPNLVPLTGYCIAGDQRIAI 582 (815)
Q Consensus 507 ~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~l~~~~~~~~~~~---~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv 582 (815)
.++|+..+++|+|.||.|-.++ ..+|+.+|+|++++.-.....+. ..|-++|+..+||.+..+-..+...+..+.|
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFV 246 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFV 246 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEE
Confidence 3578889999999999999998 56789999999987655544443 4588899999999999998889999999999
Q ss_pred EEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecc
Q 003504 583 YDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRD 662 (815)
Q Consensus 583 ~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrD 662 (815)
|||..+|.|.-+|... ..++.....-....|..||.||| +++||.||
T Consensus 247 MeyanGGeLf~HLsre------------------------------r~FsE~RtRFYGaEIvsAL~YLH---s~~ivYRD 293 (516)
T KOG0690|consen 247 MEYANGGELFFHLSRE------------------------------RVFSEDRTRFYGAEIVSALGYLH---SRNIVYRD 293 (516)
T ss_pred EEEccCceEeeehhhh------------------------------hcccchhhhhhhHHHHHHhhhhh---hCCeeeee
Confidence 9999999999888542 12222222335667999999999 89999999
Q ss_pred CCCCceEEcCCCCeeecccccceec-CCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCC
Q 003504 663 IKASSVYLDMNLEPRLSDFGLAKIF-GNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDD 741 (815)
Q Consensus 663 lk~~NIll~~~~~~kl~Dfgla~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~ 741 (815)
||.+|.|+|.||++||+|||+++.- ..+....+.+||+.|+|||++.... |+...|+|.+|||||||+.|+.||...
T Consensus 294 lKLENLlLDkDGHIKitDFGLCKE~I~~g~t~kTFCGTPEYLAPEVleDnD--YgraVDWWG~GVVMYEMmCGRLPFyn~ 371 (516)
T KOG0690|consen 294 LKLENLLLDKDGHIKITDFGLCKEEIKYGDTTKTFCGTPEYLAPEVLEDND--YGRAVDWWGVGVVMYEMMCGRLPFYNK 371 (516)
T ss_pred chhhhheeccCCceEeeecccchhcccccceeccccCChhhcCchhhcccc--ccceeehhhhhHHHHHHHhccCccccc
Confidence 9999999999999999999999853 3455677889999999999998777 789999999999999999999999863
Q ss_pred CCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCC
Q 003504 742 YPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRP 799 (815)
Q Consensus 742 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP 799 (815)
..+ .+... ++.+ .+ .+|.....+...+....+.+||.+|.
T Consensus 372 dh~----kLFeL---Il~e---------d~--kFPr~ls~eAktLLsGLL~kdP~kRL 411 (516)
T KOG0690|consen 372 DHE----KLFEL---ILME---------DL--KFPRTLSPEAKTLLSGLLKKDPKKRL 411 (516)
T ss_pred chh----HHHHH---HHhh---------hc--cCCccCCHHHHHHHHHHhhcChHhhc
Confidence 322 22211 1111 11 12445556777888899999999997
No 381
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.97 E-value=1e-31 Score=314.38 Aligned_cols=145 Identities=28% Similarity=0.359 Sum_probs=128.4
Q ss_pred cCCCCCCeecccCCeeeEEEEcC-CCcEEEEEEeecCCcc---cHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEE
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFLP-GGIHVAVKVLVHGSTL---TDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIY 583 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 583 (815)
++|.+.+.||+|+||.||+|... +++.||||+++..... ....+.+|+.++..++||||+++++++......++||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence 56888899999999999999964 6889999999754322 2357889999999999999999999999999999999
Q ss_pred EeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccC
Q 003504 584 DYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDI 663 (815)
Q Consensus 584 ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDl 663 (815)
||+++|+|.++++.. ..+++.....|+.||+.||+||| ..+||||||
T Consensus 84 Ey~~g~~L~~li~~~------------------------------~~l~~~~~~~i~~qil~aL~yLH---~~gIiHrDL 130 (669)
T cd05610 84 EYLIGGDVKSLLHIY------------------------------GYFDEEMAVKYISEVALALDYLH---RHGIIHRDL 130 (669)
T ss_pred eCCCCCCHHHHHHhc------------------------------CCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCc
Confidence 999999999999642 24667788999999999999999 789999999
Q ss_pred CCCceEEcCCCCeeecccccce
Q 003504 664 KASSVYLDMNLEPRLSDFGLAK 685 (815)
Q Consensus 664 k~~NIll~~~~~~kl~Dfgla~ 685 (815)
||+|||++.++.+||+|||+++
T Consensus 131 KP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 131 KPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred cHHHEEEcCCCCEEEEeCCCCc
Confidence 9999999999999999999886
No 382
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.97 E-value=2.2e-31 Score=273.67 Aligned_cols=220 Identities=22% Similarity=0.176 Sum_probs=175.3
Q ss_pred cCCeeeEEEEc-CCCcEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeCCCCChhhhhcc
Q 003504 519 GKFGPVYRGFL-PGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHD 597 (815)
Q Consensus 519 G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL~~~l~~ 597 (815)
|.+|.||+++. .+++.||+|.++... .+.+|...+....||||+++++++.+.+..++||||+++|+|.+++..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 89999999995 578899999986532 234455555566799999999999999999999999999999999864
Q ss_pred CCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCceEEcCCCCee
Q 003504 598 LPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPR 677 (815)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~k 677 (815)
. ..+++.....++.|++.||+||| +.+|+||||||+||+++.++.++
T Consensus 79 ~------------------------------~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~ 125 (237)
T cd05576 79 F------------------------------LNIPEECVKRWAAEMVVALDALH---REGIVCRDLNPNNILLDDRGHIQ 125 (237)
T ss_pred h------------------------------cCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEEcCCCCEE
Confidence 2 24788889999999999999999 89999999999999999999999
Q ss_pred ecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCccccccHHHHHHHH
Q 003504 678 LSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWVRGL 757 (815)
Q Consensus 678 l~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 757 (815)
++|||.+...... .....++..|+|||...... ++.++||||+|+++||+++|+.|+...... .
T Consensus 126 l~df~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~--~~~~~DvwslG~il~el~~g~~~~~~~~~~-~----------- 189 (237)
T cd05576 126 LTYFSRWSEVEDS--CDGEAVENMYCAPEVGGISE--ETEACDWWSLGAILFELLTGKTLVECHPSG-I----------- 189 (237)
T ss_pred Eecccchhccccc--cccCCcCccccCCcccCCCC--CCchhhHHHHHHHHHHHHHCcchhhcCchh-c-----------
Confidence 9999988766442 22334677899999886655 688999999999999999999887531100 0
Q ss_pred HhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHH
Q 003504 758 VRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQ 802 (815)
Q Consensus 758 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ 802 (815)
.. ......+...+..+.+++.+|++.||++||++.
T Consensus 190 -~~---------~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~ 224 (237)
T cd05576 190 -NT---------HTTLNIPEWVSEEARSLLQQLLQFNPTERLGAG 224 (237)
T ss_pred -cc---------ccccCCcccCCHHHHHHHHHHccCCHHHhcCCC
Confidence 00 000011233456788999999999999999973
No 383
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=5.8e-32 Score=272.07 Aligned_cols=240 Identities=27% Similarity=0.361 Sum_probs=190.3
Q ss_pred hcCCCCCCeecccCCeeeEEEEcC-CCcEEEEEEeecCCcccHHH---HHHHHHHhcCC-CCCCceeeeeEEEeCCeeEE
Q 003504 507 TSNFDRGTLLAEGKFGPVYRGFLP-GGIHVAVKVLVHGSTLTDQE---AARELEYLGRI-KHPNLVPLTGYCIAGDQRIA 581 (815)
Q Consensus 507 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~---~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~l 581 (815)
..+|....+||+|+||.|-.|.-+ +...+|||++++.-.....+ -..|-++|+-- +-|.++++..++...+..|.
T Consensus 348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyF 427 (683)
T KOG0696|consen 348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYF 427 (683)
T ss_pred ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheee
Confidence 347888999999999999999854 45679999997753322221 23455566555 57899999999999999999
Q ss_pred EEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeec
Q 003504 582 IYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHR 661 (815)
Q Consensus 582 v~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHr 661 (815)
||||+.+|+|--.+++. | ....+...-.|..||-||-+|| +++||.|
T Consensus 428 VMEyvnGGDLMyhiQQ~--------------------------G----kFKEp~AvFYAaEiaigLFFLh---~kgIiYR 474 (683)
T KOG0696|consen 428 VMEYVNGGDLMYHIQQV--------------------------G----KFKEPVAVFYAAEIAIGLFFLH---SKGIIYR 474 (683)
T ss_pred EEEEecCchhhhHHHHh--------------------------c----ccCCchhhhhhHHHHHHhhhhh---cCCeeee
Confidence 99999999998888652 1 2233345567889999999999 8999999
Q ss_pred cCCCCceEEcCCCCeeecccccceecC-CCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCC
Q 003504 662 DIKASSVYLDMNLEPRLSDFGLAKIFG-NGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGD 740 (815)
Q Consensus 662 Dlk~~NIll~~~~~~kl~Dfgla~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~ 740 (815)
|||.+|||+|.+|++||+|||+++.-- .+....+.+||+.|+|||++.=.. |+..+|+|||||+||||+.|++||++
T Consensus 475 DLKLDNvmLd~eGHiKi~DFGmcKEni~~~~TTkTFCGTPdYiAPEIi~YqP--YgksvDWWa~GVLLyEmlaGQpPFdG 552 (683)
T KOG0696|consen 475 DLKLDNVMLDSEGHIKIADFGMCKENIFDGVTTKTFCGTPDYIAPEIIAYQP--YGKSVDWWAFGVLLYEMLAGQPPFDG 552 (683)
T ss_pred eccccceEeccCCceEeeecccccccccCCcceeeecCCCcccccceEEecc--cccchhHHHHHHHHHHHHcCCCCCCC
Confidence 999999999999999999999998643 344667889999999999987666 78899999999999999999999997
Q ss_pred CCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCC
Q 003504 741 DYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRP 799 (815)
Q Consensus 741 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP 799 (815)
+..++.- +.+.+.+ ...|...+.+..++....+.+.|.+|.
T Consensus 553 eDE~elF-------~aI~ehn-----------vsyPKslSkEAv~ickg~ltK~P~kRL 593 (683)
T KOG0696|consen 553 EDEDELF-------QAIMEHN-----------VSYPKSLSKEAVAICKGLLTKHPGKRL 593 (683)
T ss_pred CCHHHHH-------HHHHHcc-----------CcCcccccHHHHHHHHHHhhcCCcccc
Confidence 5543332 2222221 234667778888999999999999986
No 384
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.97 E-value=1.5e-31 Score=276.57 Aligned_cols=243 Identities=23% Similarity=0.340 Sum_probs=196.5
Q ss_pred CCeecccCCeeeEEEEc-CCCcEEEEEEeecCC--cccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeCCCC
Q 003504 513 GTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGS--TLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENG 589 (815)
Q Consensus 513 ~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~g 589 (815)
.+++|.|-||+||-|.. ++|+.||||++.+.. ...+..++.|++||++++||.||.+.-.|++.+..++|||-+.+
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~G- 647 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHG- 647 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcc-
Confidence 57999999999999995 579999999997642 33456789999999999999999999999999999999999977
Q ss_pred ChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCceE
Q 003504 590 NLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVY 669 (815)
Q Consensus 590 sL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NIl 669 (815)
+..+.+-. ++...++.+.-.-+..||+.||.||| -.+|||+||||+|||
T Consensus 648 DMLEMILS----------------------------sEkgRL~er~TkFlvtQIL~ALr~LH---~knIvHCDLKPENVL 696 (888)
T KOG4236|consen 648 DMLEMILS----------------------------SEKGRLPERITKFLVTQILVALRYLH---FKNIVHCDLKPENVL 696 (888)
T ss_pred hHHHHHHH----------------------------hhcccchHHHHHHHHHHHHHHHHHhh---hcceeeccCCchhee
Confidence 54444432 23446777777788999999999999 799999999999999
Q ss_pred EcCC---CCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCccc
Q 003504 670 LDMN---LEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEK 746 (815)
Q Consensus 670 l~~~---~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~ 746 (815)
+... -++||+|||+|+..+........+||+.|+|||++.... |...-|+||.||++|--++|..||..+ +
T Consensus 697 Las~~~FPQvKlCDFGfARiIgEksFRrsVVGTPAYLaPEVLrnkG--yNrSLDMWSVGVIiYVsLSGTFPFNEd--E-- 770 (888)
T KOG4236|consen 697 LASASPFPQVKLCDFGFARIIGEKSFRRSVVGTPAYLAPEVLRNKG--YNRSLDMWSVGVIIYVSLSGTFPFNED--E-- 770 (888)
T ss_pred eccCCCCCceeeccccceeecchhhhhhhhcCCccccCHHHHhhcc--ccccccceeeeEEEEEEecccccCCCc--c--
Confidence 9744 479999999999999887778888999999999998776 677889999999999999999999752 2
Q ss_pred cccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHH
Q 003504 747 EGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIV 805 (815)
Q Consensus 747 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~ 805 (815)
++-+.++.. .-.+....+.+...+..+++...++..=++|-|..+.+
T Consensus 771 --dIndQIQNA----------aFMyPp~PW~eis~~AidlIn~LLqVkm~kRysvdk~l 817 (888)
T KOG4236|consen 771 --DINDQIQNA----------AFMYPPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSL 817 (888)
T ss_pred --chhHHhhcc----------ccccCCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhc
Confidence 222211110 00122233566778889999999999999998877654
No 385
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.97 E-value=3.6e-30 Score=265.31 Aligned_cols=237 Identities=30% Similarity=0.371 Sum_probs=192.5
Q ss_pred CCeeeEEEEcC-CCcEEEEEEeecCCccc-HHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeCCCCChhhhhcc
Q 003504 520 KFGPVYRGFLP-GGIHVAVKVLVHGSTLT-DQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHD 597 (815)
Q Consensus 520 ~~g~Vy~~~~~-~~~~vavK~l~~~~~~~-~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL~~~l~~ 597 (815)
+||.||+|+.. ++..||+|++....... .+.+.+|++.+++++|+|++++++++......++++||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 58999999976 48999999997654444 67899999999999999999999999999999999999999999999864
Q ss_pred CCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCceEEcCCCCee
Q 003504 598 LPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPR 677 (815)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~k 677 (815)
. ..+++..+..++.++++++.||| ..+++|+||+|+||+++.++.++
T Consensus 81 ~------------------------------~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~~i~~~ni~~~~~~~~~ 127 (244)
T smart00220 81 R------------------------------GRLSEDEARFYARQILSALEYLH---SNGIIHRDLKPENILLDEDGHVK 127 (244)
T ss_pred c------------------------------cCCCHHHHHHHHHHHHHHHHHHH---HcCeecCCcCHHHeEECCCCcEE
Confidence 2 12778889999999999999999 78999999999999999999999
Q ss_pred ecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCccccccHHHHHHHH
Q 003504 678 LSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWVRGL 757 (815)
Q Consensus 678 l~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 757 (815)
|+|||.+.............++..|+|||...... .+.++||||||+++|++++|..||..... ...+..+ .
T Consensus 128 l~d~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~--~~~~~Di~slG~~l~~l~~~~~p~~~~~~---~~~~~~~---~ 199 (244)
T smart00220 128 LADFGLARQLDPGGLLTTFVGTPEYMAPEVLLGKG--YGKAVDVWSLGVILYELLTGKPPFPGDDQ---LLELFKK---I 199 (244)
T ss_pred EccccceeeeccccccccccCCcCCCCHHHHccCC--CCchhhHHHHHHHHHHHHhCCCCCCCCCc---HHHHHHH---H
Confidence 99999998876554445566889999999887554 67899999999999999999999864211 1111111 1
Q ss_pred HhcCCCCccccccccCCCCH-HHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 758 VRNNKGSRAIDPKIRDTGPE-KQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 758 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
.... ....... ..+.++.+++.+|+..+|++||++.++++
T Consensus 200 ~~~~---------~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 200 GKPK---------PPFPPPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred hccC---------CCCccccccCCHHHHHHHHHHccCCchhccCHHHHhh
Confidence 1110 0000000 14568899999999999999999999986
No 386
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.5e-31 Score=271.10 Aligned_cols=254 Identities=27% Similarity=0.389 Sum_probs=191.9
Q ss_pred CCCCCCeecccCCeeeEEEE-cCCCcEEEEEEeecCCc---cc----HHHHHHHHHHhcCCCCCCceeeeeEEEe-CCee
Q 003504 509 NFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHGST---LT----DQEAARELEYLGRIKHPNLVPLTGYCIA-GDQR 579 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~l~~~~~---~~----~~~~~~E~~~l~~l~H~niv~l~g~~~~-~~~~ 579 (815)
+|-..+.+|+|+|+.||+|. +...+.||||+-.-... .. .+...+|.+|-..|+||.||++++|+.- .+..
T Consensus 464 RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsF 543 (775)
T KOG1151|consen 464 RYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSF 543 (775)
T ss_pred HHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccc
Confidence 45667789999999999998 55678899998643211 11 1235689999999999999999999864 5677
Q ss_pred EEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCee
Q 003504 580 IAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPII 659 (815)
Q Consensus 580 ~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~iv 659 (815)
+-|+|||++.+|.-||.+. ..++......|+.||+.||.||.+ .+++||
T Consensus 544 CTVLEYceGNDLDFYLKQh------------------------------klmSEKEARSIiMQiVnAL~YLNE-ikpPII 592 (775)
T KOG1151|consen 544 CTVLEYCEGNDLDFYLKQH------------------------------KLMSEKEARSIIMQIVNALKYLNE-IKPPII 592 (775)
T ss_pred eeeeeecCCCchhHHHHhh------------------------------hhhhHHHHHHHHHHHHHHHHHHhc-cCCCee
Confidence 8899999999999999763 356777888999999999999984 478999
Q ss_pred eccCCCCceEEc---CCCCeeecccccceecCCCC--------ccccccccccccCCcccCCC--CCCCCCcCcchhHHH
Q 003504 660 HRDIKASSVYLD---MNLEPRLSDFGLAKIFGNGL--------DEEIARGSPGYIPPEFAQPD--SDFPTPKSDVYCYGV 726 (815)
Q Consensus 660 HrDlk~~NIll~---~~~~~kl~Dfgla~~~~~~~--------~~~~~~gt~~y~aPE~~~~~--~~~~~~~~Dv~S~Gv 726 (815)
|-||||.|||+- ..|.+||.|||+++.+..++ -....+||.+|++||.+.-. ....+.|+||||.||
T Consensus 593 HYDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGV 672 (775)
T KOG1151|consen 593 HYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGV 672 (775)
T ss_pred eeccCCccEEEecCcccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeeh
Confidence 999999999995 44789999999999987543 12345699999999976543 334689999999999
Q ss_pred HHHHHHhCCCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHH
Q 003504 727 VLLELITGKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIV 805 (815)
Q Consensus 727 vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~ 805 (815)
++|..+.|++||+..... .++ +.++.......-.+. .-+....+..+++++|++.--++|....++.
T Consensus 673 IFyQClYGrKPFGhnqsQ---QdI-------LqeNTIlkAtEVqFP--~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA 739 (775)
T KOG1151|consen 673 IFYQCLYGRKPFGHNQSQ---QDI-------LQENTILKATEVQFP--PKPVVSSEAKAFIRRCLAYRKEDRIDVQQLA 739 (775)
T ss_pred hhhhhhccCCCCCCchhH---HHH-------HhhhchhcceeccCC--CCCccCHHHHHHHHHHHHhhhhhhhhHHHHc
Confidence 999999999999863221 112 222221111111111 1123456778999999999888887776654
No 387
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=8.7e-33 Score=261.47 Aligned_cols=265 Identities=23% Similarity=0.326 Sum_probs=194.5
Q ss_pred CCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeec--CCcccHHHHHHHHHHhcCCCCCCceeeeeEEEeC--------C
Q 003504 509 NFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVH--GSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAG--------D 577 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~--~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--------~ 577 (815)
.|+....||+|.||+||+|+. ++|++||+|+..- ....-.....+|+++++.++|+|++.++..|... .
T Consensus 18 ~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~ 97 (376)
T KOG0669|consen 18 KYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRA 97 (376)
T ss_pred HHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccc
Confidence 455567899999999999994 5688899986532 2233345668999999999999999999988653 2
Q ss_pred eeEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCC
Q 003504 578 QRIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPP 657 (815)
Q Consensus 578 ~~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ 657 (815)
..++||++|+. +|.-+|.. ....++.....+++.++..||.|+| ...
T Consensus 98 t~ylVf~~ceh-DLaGlLsn-----------------------------~~vr~sls~Ikk~Mk~Lm~GL~~iH---r~k 144 (376)
T KOG0669|consen 98 TFYLVFDFCEH-DLAGLLSN-----------------------------RKVRFSLSEIKKVMKGLMNGLYYIH---RNK 144 (376)
T ss_pred eeeeeHHHhhh-hHHHHhcC-----------------------------ccccccHHHHHHHHHHHHHHHHHHH---Hhh
Confidence 46899999998 88888853 2356778889999999999999999 889
Q ss_pred eeeccCCCCceEEcCCCCeeecccccceecCCCC-----ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHH
Q 003504 658 IIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGL-----DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELI 732 (815)
Q Consensus 658 ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~ 732 (815)
|+|||+||.|+||+.+|.+||+|||+++.+.... ..+..+-|.+|++||.+.+... ++++.|||..||||.||+
T Consensus 145 ilHRDmKaaNvLIt~dgilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~-yg~~iDiWgAgCimaeMw 223 (376)
T KOG0669|consen 145 ILHRDMKAANVLITKDGILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDRE-YGPPIDIWGAGCIMAEMW 223 (376)
T ss_pred HHhhcccHhhEEEcCCceEEeeccccccceecccccCCCCcccceeeeecCCHHHhhcccc-cCCcchhHhHHHHHHHHH
Confidence 9999999999999999999999999998765322 2233446999999999998876 799999999999999999
Q ss_pred hCCCCCCCCCCccccccHHHHHHHHHhcCCC-------Cccc--cccccCC--CCHH------HHHHHHHHHhhccccCC
Q 003504 733 TGKKPLGDDYPEEKEGNLVSWVRGLVRNNKG-------SRAI--DPKIRDT--GPEK------QMEEALKIGYLCTADLP 795 (815)
Q Consensus 733 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~--~~~~~~~--~~~~------~~~~~~~l~~~Cl~~dP 795 (815)
||.+-+.+......-.-+...+...-.+-|. .+.+ .|-.... .-++ ...+.++++..++..||
T Consensus 224 trspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP 303 (376)
T KOG0669|consen 224 TRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDP 303 (376)
T ss_pred ccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCc
Confidence 9998887643322111111111111111000 0000 0000000 0111 22478899999999999
Q ss_pred CCCCCHHHHHHH
Q 003504 796 LKRPSMQQIVGL 807 (815)
Q Consensus 796 ~~RPs~~~v~~~ 807 (815)
.+||.+.+++..
T Consensus 304 ~kR~~ad~alnh 315 (376)
T KOG0669|consen 304 TKRIDADQALNH 315 (376)
T ss_pred ccCcchHhhhch
Confidence 999999988753
No 388
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.97 E-value=1.3e-30 Score=289.01 Aligned_cols=282 Identities=18% Similarity=0.217 Sum_probs=186.4
Q ss_pred HhcCCCCCCeecccCCeeeEEEEc-----------------CCCcEEEEEEeecCCcccHHHH--------------HHH
Q 003504 506 ATSNFDRGTLLAEGKFGPVYRGFL-----------------PGGIHVAVKVLVHGSTLTDQEA--------------ARE 554 (815)
Q Consensus 506 ~~~~~~~~~~ig~G~~g~Vy~~~~-----------------~~~~~vavK~l~~~~~~~~~~~--------------~~E 554 (815)
..++|++.++||+|+||.||+|.. .+++.||||++........++| ..|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 356899999999999999999963 2356799999865433222333 346
Q ss_pred HHHhcCCCCCCc-----eeeeeEEEe--------CCeeEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccc
Q 003504 555 LEYLGRIKHPNL-----VPLTGYCIA--------GDQRIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSI 621 (815)
Q Consensus 555 ~~~l~~l~H~ni-----v~l~g~~~~--------~~~~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (815)
+.++.+++|.++ ++++|||.. .+..++||||+++|+|.++++......... ...+..... .+
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~----L~e~l~~g~-~l 297 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGC----LEEFMMAGK-KI 297 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcch----HHHHHhcCC-ch
Confidence 777777776654 678888764 346899999999999999997532110000 000000000 00
Q ss_pred cccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCceEEcCCCCeeecccccceecCCCCcccc--cccc
Q 003504 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEI--ARGS 699 (815)
Q Consensus 622 ~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~--~~gt 699 (815)
. ........+|..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++....+..... ..++
T Consensus 298 ~-~~~~~~~~~~~~~~~i~~ql~~aL~~lH---~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~t 373 (507)
T PLN03224 298 P-DNMPQDKRDINVIKGVMRQVLTGLRKLH---RIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLD 373 (507)
T ss_pred h-hhcccccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCC
Confidence 0 0001234688899999999999999999 78999999999999999999999999999986654332222 2347
Q ss_pred ccccCCcccCCCCC--------------------CCCCcCcchhHHHHHHHHHhCCC-CCCCCCCcc-----ccccHHHH
Q 003504 700 PGYIPPEFAQPDSD--------------------FPTPKSDVYCYGVVLLELITGKK-PLGDDYPEE-----KEGNLVSW 753 (815)
Q Consensus 700 ~~y~aPE~~~~~~~--------------------~~~~~~Dv~S~Gvvl~el~tg~~-p~~~~~~~~-----~~~~~~~~ 753 (815)
+.|+|||.+..... ....+.||||+||++|||++|.. ||.+..... ....+..|
T Consensus 374 p~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~ 453 (507)
T PLN03224 374 PRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRW 453 (507)
T ss_pred cceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHH
Confidence 89999998754321 01235799999999999999875 665311100 01111111
Q ss_pred HHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCC---CCCCCHHHHHH
Q 003504 754 VRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLP---LKRPSMQQIVG 806 (815)
Q Consensus 754 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP---~~RPs~~~v~~ 806 (815)
.. ... .............+..+++.+++..+| .+|+|++|+++
T Consensus 454 r~--~~~--------~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~ 499 (507)
T PLN03224 454 RM--YKG--------QKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALS 499 (507)
T ss_pred Hh--hcc--------cCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence 11 000 011111123345678899999999766 68999999985
No 389
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2e-31 Score=285.71 Aligned_cols=239 Identities=21% Similarity=0.270 Sum_probs=191.9
Q ss_pred hcCCCCCCeecccCCeeeEEEE-cCCCcEEEEEEeecCCcccHHHHHHHHHHhcCC-CCCCceeeeeEEEeCCeeEEEEE
Q 003504 507 TSNFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHGSTLTDQEAARELEYLGRI-KHPNLVPLTGYCIAGDQRIAIYD 584 (815)
Q Consensus 507 ~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~e 584 (815)
++.|.....+|.|+|+.|-.+. ..+++..+||++.+. ..+..+|+.++... +||||+++.+.+.++.+.++|||
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~----~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e 396 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKR----ADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVME 396 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheecccc----ccccccccchhhhhcCCCcceeecceecCCceeeeeeh
Confidence 5678888889999999999988 467888999999664 22345677666666 69999999999999999999999
Q ss_pred eCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCC
Q 003504 585 YMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIK 664 (815)
Q Consensus 585 y~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk 664 (815)
++.+|-+.+.+...+ ... ..+..|+.+++.|+.||| ++++||||||
T Consensus 397 ~l~g~ell~ri~~~~------------------------------~~~-~e~~~w~~~lv~Av~~LH---~~gvvhRDLk 442 (612)
T KOG0603|consen 397 LLDGGELLRRIRSKP------------------------------EFC-SEASQWAAELVSAVDYLH---EQGVVHRDLK 442 (612)
T ss_pred hccccHHHHHHHhcc------------------------------hhH-HHHHHHHHHHHHHHHHHH---hcCeeecCCC
Confidence 999998888776421 112 556779999999999999 8999999999
Q ss_pred CCceEE-cCCCCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCC
Q 003504 665 ASSVYL-DMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYP 743 (815)
Q Consensus 665 ~~NIll-~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~ 743 (815)
|+|||+ +..++++|+|||.++..... ....+-|..|.|||+..... +++++|+|||||+||+|++|+.||.....
T Consensus 443 p~NIL~~~~~g~lrltyFG~a~~~~~~--~~tp~~t~~y~APEvl~~~~--yt~acD~WSLGvlLy~ML~G~tp~~~~P~ 518 (612)
T KOG0603|consen 443 PGNILLDGSAGHLRLTYFGFWSELERS--CDTPALTLQYVAPEVLAIQE--YTEACDWWSLGVLLYEMLTGRTLFAAHPA 518 (612)
T ss_pred hhheeecCCCCcEEEEEechhhhCchh--hcccchhhcccChhhhccCC--CCcchhhHHHHHHHHHHHhCCCccccCCc
Confidence 999999 68999999999999987654 23335688999999998555 89999999999999999999999975322
Q ss_pred ccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 744 EEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 744 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
. ..+.. .+. .+ ......+.+..+|+..|++.||.+||+|.++..
T Consensus 519 ~---~ei~~----~i~--------~~----~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 519 G---IEIHT----RIQ--------MP----KFSECVSDEAKDLLQQLLQVDPALRLGADEIGA 562 (612)
T ss_pred h---HHHHH----hhc--------CC----ccccccCHHHHHHHHHhccCChhhCcChhhhcc
Confidence 1 11111 111 11 112566778899999999999999999999864
No 390
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.97 E-value=2e-33 Score=282.41 Aligned_cols=201 Identities=31% Similarity=0.438 Sum_probs=124.3
Q ss_pred CeEEEEecCCCCCccCCCcccccCCCCCCEEECcCCCCCCCCcccCCCCCCCEEEccCCcCCccCCccccCCCCCcEEEc
Q 003504 28 QHVTDFLASNSGLSGSVPDTTIGKLSKLQSLDLSENNITALPSDLWSLGSLKSLNLSYNRISGSLPSNIGNFGLLEVFDL 107 (815)
Q Consensus 28 ~~~~~l~~~~~~~~g~~~~~~~~~l~~L~~L~Ls~n~l~~lp~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L 107 (815)
..++.+++++|+++ .+|+ +++.+..++.|+.|+|++..+|+.+.++.+|..|+.++|.+. ..|+.++.+..|+.|+.
T Consensus 68 ~~l~vl~~~~n~l~-~lp~-aig~l~~l~~l~vs~n~ls~lp~~i~s~~~l~~l~~s~n~~~-el~~~i~~~~~l~dl~~ 144 (565)
T KOG0472|consen 68 ACLTVLNVHDNKLS-QLPA-AIGELEALKSLNVSHNKLSELPEQIGSLISLVKLDCSSNELK-ELPDSIGRLLDLEDLDA 144 (565)
T ss_pred cceeEEEeccchhh-hCCH-HHHHHHHHHHhhcccchHhhccHHHhhhhhhhhhhcccccee-ecCchHHHHhhhhhhhc
Confidence 45667777777776 4554 567777777777777777777777777777777777777776 55666666666666666
Q ss_pred cCCcCCCCChhhhcCCcCCCEEEcCCCcccccCCcccccccccceeeccCCcCCCCCCchhhccCCCCCEEEcCCCc---
Q 003504 108 SNNNFSGEIPAAISSLVSLRVLKLDGNMFQWSIPPGLLNCQSLVTVDLSMNQLNGSLPDGFGAAFPKLKSLNLAGNE--- 184 (815)
Q Consensus 108 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~L~~N~--- 184 (815)
.+|+++ ..|+.+..+.+|..|++.+|+++.. |+..-+++.|+.||...|.++ ++|..++ ++.+|+.|+|.+|+
T Consensus 145 ~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l-~~~~i~m~~L~~ld~~~N~L~-tlP~~lg-~l~~L~~LyL~~Nki~~ 220 (565)
T KOG0472|consen 145 TNNQIS-SLPEDMVNLSKLSKLDLEGNKLKAL-PENHIAMKRLKHLDCNSNLLE-TLPPELG-GLESLELLYLRRNKIRF 220 (565)
T ss_pred cccccc-cCchHHHHHHHHHHhhccccchhhC-CHHHHHHHHHHhcccchhhhh-cCChhhc-chhhhHHHHhhhccccc
Confidence 666666 4555555555555555555555532 222222555555555555554 4554442 34445555555554
Q ss_pred -------------------ccCCCCC-CCCCCCCCeEeccCCcCCCcchhhh-hcccceeeeccccccCccc
Q 003504 185 -------------------IKGRDTH-FAGLKSITNLNISGNLFQGSVMGVF-LESLEVIDLRSNQFQGHIS 235 (815)
Q Consensus 185 -------------------l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~~~~~-l~~L~~L~L~~N~l~~~~~ 235 (815)
|..+|.. ...+++|..|||.+|++++.|.+.. +.+|+.||+++|.+++.+.
T Consensus 221 lPef~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLRdNklke~Pde~clLrsL~rLDlSNN~is~Lp~ 292 (565)
T KOG0472|consen 221 LPEFPGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLDLRDNKLKEVPDEICLLRSLERLDLSNNDISSLPY 292 (565)
T ss_pred CCCCCccHHHHHHHhcccHHHhhHHHHhcccccceeeeccccccccCchHHHHhhhhhhhcccCCccccCCc
Confidence 4444433 3356777777777777777777665 6777777777777765443
No 391
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.97 E-value=3.7e-33 Score=293.55 Aligned_cols=328 Identities=23% Similarity=0.336 Sum_probs=250.8
Q ss_pred EEecCCCCCccCCCcccccCCCCCCEEECcCCCCC--CCCcccCCCCCCCEEEccCCcCCccCCccccCCCCCcEEEccC
Q 003504 32 DFLASNSGLSGSVPDTTIGKLSKLQSLDLSENNIT--ALPSDLWSLGSLKSLNLSYNRISGSLPSNIGNFGLLEVFDLSN 109 (815)
Q Consensus 32 ~l~~~~~~~~g~~~~~~~~~l~~L~~L~Ls~n~l~--~lp~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~ 109 (815)
.|.+.+|++.. +.. .+..|+.|+.+++.+|++. .||.++|.|..|+.||||+|+++ ..|..+.+.+++-+|+||+
T Consensus 59 HLs~~HN~L~~-vhG-ELs~Lp~LRsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~ 135 (1255)
T KOG0444|consen 59 HLSMAHNQLIS-VHG-ELSDLPRLRSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSY 135 (1255)
T ss_pred hhhhhhhhhHh-hhh-hhccchhhHHHhhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEccc
Confidence 34455555542 222 3556666677777777765 57777888888888888888877 6777777777888888888
Q ss_pred CcCCCCChhhhcCCcCCCEEEcCCCcccccCCcccccccccceeeccCCcCCCCCCchhhccCCCCCEEEcCCCccc--C
Q 003504 110 NNFSGEIPAAISSLVSLRVLKLDGNMFQWSIPPGLLNCQSLVTVDLSMNQLNGSLPDGFGAAFPKLKSLNLAGNEIK--G 187 (815)
Q Consensus 110 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~--~ 187 (815)
|+|..+....|.+|+.|-.||||+|++. .+|+.+..|..|++|+|++|.+. .+--.-.-.+.+|+.|.+++.+=+ .
T Consensus 136 N~IetIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~-hfQLrQLPsmtsL~vLhms~TqRTl~N 213 (1255)
T KOG0444|consen 136 NNIETIPNSLFINLTDLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLN-HFQLRQLPSMTSLSVLHMSNTQRTLDN 213 (1255)
T ss_pred CccccCCchHHHhhHhHhhhccccchhh-hcCHHHHHHhhhhhhhcCCChhh-HHHHhcCccchhhhhhhcccccchhhc
Confidence 8887666666777888888888888877 56777777778888888888764 221111123567777777777543 4
Q ss_pred CCCCCCCCCCCCeEeccCCcCCCcchhhh-hcccceeeeccccccCcccccccccccCCccceEEEcCCCccCcchhhcc
Q 003504 188 RDTHFAGLKSITNLNISGNLFQGSVMGVF-LESLEVIDLRSNQFQGHISQVQFNSSYNWSRLVYVDLSENQLSGEIFHNF 266 (815)
Q Consensus 188 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~-l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 266 (815)
+|+.+..|.+|..+|||.|.+..+|...+ +.+|+.|+||+|+|+..-. ....|.+|++|+||.|+++ .+|..+
T Consensus 214 ~Ptsld~l~NL~dvDlS~N~Lp~vPecly~l~~LrrLNLS~N~iteL~~-----~~~~W~~lEtLNlSrNQLt-~LP~av 287 (1255)
T KOG0444|consen 214 IPTSLDDLHNLRDVDLSENNLPIVPECLYKLRNLRRLNLSGNKITELNM-----TEGEWENLETLNLSRNQLT-VLPDAV 287 (1255)
T ss_pred CCCchhhhhhhhhccccccCCCcchHHHhhhhhhheeccCcCceeeeec-----cHHHHhhhhhhccccchhc-cchHHH
Confidence 78889999999999999999999998888 9999999999999874321 2345789999999999999 789999
Q ss_pred ccCCCCCEEEecCCcCc--CCCccccccccCCCeEecCCCcCcCCCchhhhcCCCCCEEeCCCCcCCCCCCcc-CCCCcc
Q 003504 267 SQAQNLKHLSLAYNRFT--RQEFPQIGTLLGLEHLNLSRTSLIGDIPSEILQLSSLHTLDLSMNHLTGQIPTV-SAKNLG 343 (815)
Q Consensus 267 ~~l~~L~~L~L~~N~l~--~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~-~~~~L~ 343 (815)
..+++|+.|++.+|+++ ++| ..|+.+.+|+.+.+++|.+. .+|..+..+..|+.|.|++|+|-..+..+ .++.|+
T Consensus 288 cKL~kL~kLy~n~NkL~FeGiP-SGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLiTLPeaIHlL~~l~ 365 (1255)
T KOG0444|consen 288 CKLTKLTKLYANNNKLTFEGIP-SGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLITLPEAIHLLPDLK 365 (1255)
T ss_pred hhhHHHHHHHhccCcccccCCc-cchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhcccccceeechhhhhhcCCcc
Confidence 99999999999999984 444 68999999999999999987 89999999999999999999998766665 678999
Q ss_pred EEEccCCcCcccCChHHhhcCCCCceeecc
Q 003504 344 IIDMSHNNLSGEIPASLLEKLPQMERFNFS 373 (815)
Q Consensus 344 ~L~ls~N~l~~~~p~~~~~~l~~l~~l~l~ 373 (815)
.|||..|.-- ..|+.--..-..+++.++.
T Consensus 366 vLDlreNpnL-VMPPKP~da~~~lefYNID 394 (1255)
T KOG0444|consen 366 VLDLRENPNL-VMPPKPNDARKKLEFYNID 394 (1255)
T ss_pred eeeccCCcCc-cCCCCcchhhhcceeeecc
Confidence 9999999754 3443322222456665443
No 392
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.97 E-value=2.6e-31 Score=244.62 Aligned_cols=204 Identities=22% Similarity=0.361 Sum_probs=168.5
Q ss_pred cCCCCCCeecccCCeeeEEEE-cCCCcEEEEEEeecC-CcccHHHHHHHHHHhcCC-CCCCceeeeeEEEeCCeeEEEEE
Q 003504 508 SNFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHG-STLTDQEAARELEYLGRI-KHPNLVPLTGYCIAGDQRIAIYD 584 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~l~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~e 584 (815)
++......||+|++|.|-+-+ ..+|+..|||++... ..+.++...+|+++..+- ..|.+|.++|........++.||
T Consensus 46 d~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME 125 (282)
T KOG0984|consen 46 DDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICME 125 (282)
T ss_pred hhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHH
Confidence 344446789999999998887 467999999998653 223455677888876554 79999999999999999999999
Q ss_pred eCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCC
Q 003504 585 YMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIK 664 (815)
Q Consensus 585 y~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk 664 (815)
.|.- ||..|.++.- ..+..+.....=+||..|.+||.|||+ ...++|||+|
T Consensus 126 ~M~t-Sldkfy~~v~--------------------------~~g~~ipE~vlGkIa~Svv~al~~L~~--kL~vIHRDvK 176 (282)
T KOG0984|consen 126 LMDT-SLDKFYRKVL--------------------------KKGGTIPEDVLGKIAVSVVHALEFLHS--KLSVIHRDVK 176 (282)
T ss_pred Hhhh-hHHHHHHHHH--------------------------hcCCcCchHHhhHhHHHHHHHHHHHHH--HhhhhhccCC
Confidence 9987 8888875421 124455666677899999999999996 6789999999
Q ss_pred CCceEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCCC--CCCCCcCcchhHHHHHHHHHhCCCCCCC
Q 003504 665 ASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDS--DFPTPKSDVYCYGVVLLELITGKKPLGD 740 (815)
Q Consensus 665 ~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~~~Dv~S~Gvvl~el~tg~~p~~~ 740 (815)
|+|||++.+|++||+|||.+..+......+...|...|||||.+..+. ..|+.|+||||+|+.+.||.+++.||..
T Consensus 177 PsNiLIn~~GqVKiCDFGIsG~L~dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~ 254 (282)
T KOG0984|consen 177 PSNILINYDGQVKICDFGISGYLVDSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYES 254 (282)
T ss_pred cceEEEccCCcEEEcccccceeehhhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccc
Confidence 999999999999999999999887665556677999999999887643 2379999999999999999999999975
No 393
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.97 E-value=3.6e-30 Score=293.53 Aligned_cols=279 Identities=18% Similarity=0.203 Sum_probs=170.5
Q ss_pred HhcCCCCCCeecccCCeeeEEEEcC-C----CcEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCceeeeeE------EE
Q 003504 506 ATSNFDRGTLLAEGKFGPVYRGFLP-G----GIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGY------CI 574 (815)
Q Consensus 506 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~----~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~------~~ 574 (815)
..++|+..+.||+|+||.||+|+.. + +..||||++..... .+....| .+....+.+++.+... +.
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--VEIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--hHHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 4568999999999999999999964 4 68999998754221 1111111 1122222233322221 23
Q ss_pred eCCeeEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCC
Q 003504 575 AGDQRIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGC 654 (815)
Q Consensus 575 ~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~ 654 (815)
.....++||||+++|+|.++++...... ....+.... .... .............++.|++.||+|||
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~------~v~~~l~~~---~~~l-~~~~~r~~~~i~~i~~qll~aL~yLH--- 272 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPY------NVEPYLLGK---VQDL-PKGLERENKIIQTIMRQILFALDGLH--- 272 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCch------hHHHHhccc---hhhc-cccchhhHHHHHHHHHHHHHHHHHHH---
Confidence 4568899999999999999997532110 000000000 0000 00111223445679999999999999
Q ss_pred CCCeeeccCCCCceEEcC-CCCeeecccccceecCCCC--ccccccccccccCCcccCCCCC------------------
Q 003504 655 SPPIIHRDIKASSVYLDM-NLEPRLSDFGLAKIFGNGL--DEEIARGSPGYIPPEFAQPDSD------------------ 713 (815)
Q Consensus 655 ~~~ivHrDlk~~NIll~~-~~~~kl~Dfgla~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~------------------ 713 (815)
+++||||||||+|||++. ++.+||+|||+|+.+..+. ......|++.|+|||.+.....
T Consensus 273 ~~gIiHRDLKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~ 352 (566)
T PLN03225 273 STGIVHRDVKPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLW 352 (566)
T ss_pred HCCEEeCcCCHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhc
Confidence 889999999999999995 5899999999998664332 2334568999999996532221
Q ss_pred --CCCCcCcchhHHHHHHHHHhCCCCCCCCCCc------cccccHHHHHHHHHhcCCCCccccccccC--CCCHHHHHHH
Q 003504 714 --FPTPKSDVYCYGVVLLELITGKKPLGDDYPE------EKEGNLVSWVRGLVRNNKGSRAIDPKIRD--TGPEKQMEEA 783 (815)
Q Consensus 714 --~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 783 (815)
.+..++|||||||++|||+++..|++..... ........|....... ..+.... ........+.
T Consensus 353 ~~~~~~k~DVwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~d~~~~~~ 426 (566)
T PLN03225 353 QLNLPDRFDIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPR------ASPDLRRGFEVLDLDGGAG 426 (566)
T ss_pred cccCCCCcccHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccc------cchhhhhhhhhccccchHH
Confidence 1234679999999999999977665421000 0001111221110000 0000000 0001112345
Q ss_pred HHHHhhccccCCCCCCCHHHHHHH
Q 003504 784 LKIGYLCTADLPLKRPSMQQIVGL 807 (815)
Q Consensus 784 ~~l~~~Cl~~dP~~RPs~~~v~~~ 807 (815)
.+++.+|++.||++|||++|+++.
T Consensus 427 ~dLi~~mL~~dP~kR~ta~e~L~H 450 (566)
T PLN03225 427 WELLKSMMRFKGRQRISAKAALAH 450 (566)
T ss_pred HHHHHHHccCCcccCCCHHHHhCC
Confidence 689999999999999999999863
No 394
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.97 E-value=7.7e-31 Score=244.98 Aligned_cols=256 Identities=20% Similarity=0.321 Sum_probs=200.7
Q ss_pred hcCCCCCCeecccCCeeeEEEE-cCCCcEEEEEEeecCCcccHHHHHHHHHHhcCCC-CCCceeeeeEEEeCC--eeEEE
Q 003504 507 TSNFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIK-HPNLVPLTGYCIAGD--QRIAI 582 (815)
Q Consensus 507 ~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~--~~~lv 582 (815)
.++|++.+.+|+|.|++||.|. ..+..+++||++ .+...+.+.+|++||+.++ ||||+++++...++. .+.+|
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiL---KPVkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLi 113 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKIL---KPVKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLI 113 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeee---chHHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhH
Confidence 5678889999999999999998 567889999999 4567889999999999997 999999999998754 56899
Q ss_pred EEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecc
Q 003504 583 YDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRD 662 (815)
Q Consensus 583 ~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrD 662 (815)
+||+.+.+...+... ++.....-...+++.||.|+| ++||+|||
T Consensus 114 FE~v~n~Dfk~ly~t---------------------------------l~d~dIryY~~elLkALdyCH---S~GImHRD 157 (338)
T KOG0668|consen 114 FEYVNNTDFKQLYPT---------------------------------LTDYDIRYYIYELLKALDYCH---SMGIMHRD 157 (338)
T ss_pred hhhhccccHHHHhhh---------------------------------hchhhHHHHHHHHHHHHhHHH---hcCccccc
Confidence 999999887666542 333445567889999999999 99999999
Q ss_pred CCCCceEEcCC-CCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCC
Q 003504 663 IKASSVYLDMN-LEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDD 741 (815)
Q Consensus 663 lk~~NIll~~~-~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~ 741 (815)
+||.|++||.. -.++|+|+|+|.++.++......+.+..|..||.+..-.. ++-.-|+|||||++.+|+..+.||...
T Consensus 158 VKPhNvmIdh~~rkLrlIDWGLAEFYHp~~eYnVRVASRyfKGPELLVdy~~-YDYSLD~WS~GcmlA~miFrkepFFhG 236 (338)
T KOG0668|consen 158 VKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDYQM-YDYSLDMWSLGCMLASMIFRKEPFFHG 236 (338)
T ss_pred CCcceeeechhhceeeeeecchHhhcCCCceeeeeeehhhcCCchheeechh-ccccHHHHHHHHHHHHHHhccCcccCC
Confidence 99999999954 5699999999999998888888888999999999876554 577889999999999999999998742
Q ss_pred CCccccccHHHHHHH--------HHhcCCCCccccccccC----------------CCCHHHHHHHHHHHhhccccCCCC
Q 003504 742 YPEEKEGNLVSWVRG--------LVRNNKGSRAIDPKIRD----------------TGPEKQMEEALKIGYLCTADLPLK 797 (815)
Q Consensus 742 ~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~l~~~Cl~~dP~~ 797 (815)
.....++++.++. ++.. ..-.+||.+.. ....-..++..+++.+.+..|..+
T Consensus 237 --~dN~DQLVkIakVLGt~el~~Yl~K--Y~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqe 312 (338)
T KOG0668|consen 237 --HDNYDQLVKIAKVLGTDELYAYLNK--YQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQE 312 (338)
T ss_pred --CCCHHHHHHHHHHhChHHHHHHHHH--HccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhcccc
Confidence 2223344433321 1111 11113333221 111112478899999999999999
Q ss_pred CCCHHHHHH
Q 003504 798 RPSMQQIVG 806 (815)
Q Consensus 798 RPs~~~v~~ 806 (815)
|||++|+..
T Consensus 313 RlTakEam~ 321 (338)
T KOG0668|consen 313 RLTAKEAMA 321 (338)
T ss_pred ccchHHHhc
Confidence 999999864
No 395
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=2.6e-30 Score=272.66 Aligned_cols=213 Identities=25% Similarity=0.351 Sum_probs=172.7
Q ss_pred cCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCcccHH---HHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEE
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGSTLTDQ---EAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIY 583 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~---~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 583 (815)
.-|...+.||-|+||+|.++.. ++...+|+|.+++.+..... ..+.|.+||+.-+.+.||+|+..|.+.+..|.||
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVM 708 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM 708 (1034)
T ss_pred cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEE
Confidence 4577789999999999999985 44566899999876554433 4578999999999999999999999999999999
Q ss_pred EeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccC
Q 003504 584 DYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDI 663 (815)
Q Consensus 584 ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDl 663 (815)
||+++|++-.+|.... .+......-.+..++.|+++.| ..|+|||||
T Consensus 709 dYIPGGDmMSLLIrmg------------------------------IFeE~LARFYIAEltcAiesVH---kmGFIHRDi 755 (1034)
T KOG0608|consen 709 DYIPGGDMMSLLIRMG------------------------------IFEEDLARFYIAELTCAIESVH---KMGFIHRDI 755 (1034)
T ss_pred eccCCccHHHHHHHhc------------------------------cCHHHHHHHHHHHHHHHHHHHH---hccceeccc
Confidence 9999999999997631 1222222234456899999999 899999999
Q ss_pred CCCceEEcCCCCeeecccccceecC---------CCC----------------------------------ccccccccc
Q 003504 664 KASSVYLDMNLEPRLSDFGLAKIFG---------NGL----------------------------------DEEIARGSP 700 (815)
Q Consensus 664 k~~NIll~~~~~~kl~Dfgla~~~~---------~~~----------------------------------~~~~~~gt~ 700 (815)
||+|||||.||++||.|||++.-+. .+. .....+||+
T Consensus 756 KPDNILIDrdGHIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~ 835 (1034)
T KOG0608|consen 756 KPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTP 835 (1034)
T ss_pred CccceEEccCCceeeeeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCC
Confidence 9999999999999999999986431 110 001123999
Q ss_pred cccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCccccccHHHHHH
Q 003504 701 GYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWVR 755 (815)
Q Consensus 701 ~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~ 755 (815)
.|+|||++.... ++.-+|+||.|||||||+.|+.||....+.+....+..|-.
T Consensus 836 nyiapevl~r~g--~~q~cdwws~gvil~em~~g~~pf~~~tp~~tq~kv~nw~~ 888 (1034)
T KOG0608|consen 836 NYIAPEVLARTG--YTQLCDWWSVGVILYEMLVGQPPFLADTPGETQYKVINWRN 888 (1034)
T ss_pred cccChHHhcccC--ccccchhhHhhHHHHHHhhCCCCccCCCCCcceeeeeehhh
Confidence 999999998766 78899999999999999999999999888777666666643
No 396
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.96 E-value=1.5e-30 Score=284.63 Aligned_cols=241 Identities=27% Similarity=0.379 Sum_probs=182.0
Q ss_pred CCCeecccCCe-eeEEEEcCCCcEEEEEEeecCCcccHHHHHHHHHHhcCC-CCCCceeeeeEEEeCCeeEEEEEeCCCC
Q 003504 512 RGTLLAEGKFG-PVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRI-KHPNLVPLTGYCIAGDQRIAIYDYMENG 589 (815)
Q Consensus 512 ~~~~ig~G~~g-~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ey~~~g 589 (815)
-.+++|.|+.| .||+|... |+.||||++-. ....-..+|+..++.- +|||||++++.-.+....|+..|.|..
T Consensus 513 ~~eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~---e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~~- 587 (903)
T KOG1027|consen 513 PKEILGYGSNGTVVFRGVYE-GREVAVKRLLE---EFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCAC- 587 (903)
T ss_pred cHHHcccCCCCcEEEEEeeC-CceehHHHHhh---HhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhhh-
Confidence 34678999987 68999986 78999999843 3344567999999887 599999998877778889999999987
Q ss_pred ChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCceE
Q 003504 590 NLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVY 669 (815)
Q Consensus 590 sL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NIl 669 (815)
+|.+++... +. +.+ .... ..-..+..|++.||++|| +-+||||||||.|||
T Consensus 588 sL~dlie~~--~~-d~~-------------------~~~~----i~~~~~l~q~~~GlaHLH---sl~iVHRDLkPQNIL 638 (903)
T KOG1027|consen 588 SLQDLIESS--GL-DVE-------------------MQSD----IDPISVLSQIASGLAHLH---SLKIVHRDLKPQNIL 638 (903)
T ss_pred hHHHHHhcc--cc-chh-------------------hccc----ccHHHHHHHHHHHHHHHH---hcccccccCCCceEE
Confidence 999999752 00 000 0000 223568889999999999 899999999999999
Q ss_pred EcC---C--CCeeecccccceecCCCCc----cccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh-CCCCCC
Q 003504 670 LDM---N--LEPRLSDFGLAKIFGNGLD----EEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT-GKKPLG 739 (815)
Q Consensus 670 l~~---~--~~~kl~Dfgla~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~ 739 (815)
|+. + ..++|+|||+++.+..+.. .....||-||+|||.+.... -+.++||||+|||+|+.++ |..||+
T Consensus 639 I~~~~~~~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~--~~~avDiFslGCvfyYvltgG~HpFG 716 (903)
T KOG1027|consen 639 ISVPSADGTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDR--KTQAVDIFSLGCVFYYVLTGGSHPFG 716 (903)
T ss_pred EEccCCCcceeEEecccccccccCCCcchhhcccCCCCcccccCHHHHhccc--cCcccchhhcCceEEEEecCCccCCC
Confidence 986 3 4699999999999876542 23456999999999998776 4668999999999999999 599998
Q ss_pred CCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHH
Q 003504 740 DDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIV 805 (815)
Q Consensus 740 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~ 805 (815)
+....+ .++.. .+. +-. ......++ +..+++.++++++|..||++.+|+
T Consensus 717 d~~~R~--~NIl~-------~~~-----~L~-~L~~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL 765 (903)
T KOG1027|consen 717 DSLERQ--ANILT-------GNY-----TLV-HLEPLPDC--EAKDLISRMLNPDPQLRPSATDVL 765 (903)
T ss_pred chHHhh--hhhhc-------Ccc-----cee-eeccCchH--HHHHHHHHhcCCCcccCCCHHHHh
Confidence 643221 12221 110 000 00111222 788999999999999999999996
No 397
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=2.6e-31 Score=274.15 Aligned_cols=241 Identities=22% Similarity=0.260 Sum_probs=197.4
Q ss_pred CCCCCCeecccCCeeeEEEEcCCCc-EEEEEEeecCCccc---HHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEE
Q 003504 509 NFDRGTLLAEGKFGPVYRGFLPGGI-HVAVKVLVHGSTLT---DQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYD 584 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~~~~~-~vavK~l~~~~~~~---~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 584 (815)
++.....+|-|+||.|=.+..+... .+|+|.+++....+ ++.+..|-.||...+.|.||++|-.+.+....|+.||
T Consensus 421 dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmE 500 (732)
T KOG0614|consen 421 DLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLME 500 (732)
T ss_pred hhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHH
Confidence 4455678999999999999865443 48999887654333 3456789999999999999999999999999999999
Q ss_pred eCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCC
Q 003504 585 YMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIK 664 (815)
Q Consensus 585 y~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk 664 (815)
-|-+|.|...|+++. .++-....-++..+.+|++||| +.+||.||||
T Consensus 501 aClGGElWTiLrdRg------------------------------~Fdd~tarF~~acv~EAfeYLH---~k~iIYRDLK 547 (732)
T KOG0614|consen 501 ACLGGELWTILRDRG------------------------------SFDDYTARFYVACVLEAFEYLH---RKGIIYRDLK 547 (732)
T ss_pred hhcCchhhhhhhhcC------------------------------CcccchhhhhHHHHHHHHHHHH---hcCceeccCC
Confidence 999999999998641 2222333446777999999999 8999999999
Q ss_pred CCceEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCc
Q 003504 665 ASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPE 744 (815)
Q Consensus 665 ~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~ 744 (815)
|+|.++|.+|-+||.|||+|+..+.+....+.+||+.|.|||++.... -+..+|.||+|+++|||++|.+||.+.++-
T Consensus 548 PENllLd~~Gy~KLVDFGFAKki~~g~KTwTFcGTpEYVAPEIILnKG--HD~avDyWaLGIli~ELL~G~pPFs~~dpm 625 (732)
T KOG0614|consen 548 PENLLLDNRGYLKLVDFGFAKKIGSGRKTWTFCGTPEYVAPEIILNKG--HDRAVDYWALGILIYELLTGSPPFSGVDPM 625 (732)
T ss_pred hhheeeccCCceEEeehhhHHHhccCCceeeecCCcccccchhhhccC--cchhhHHHHHHHHHHHHHcCCCCCCCCchH
Confidence 999999999999999999999999998889999999999999998776 478899999999999999999999986654
Q ss_pred cccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCC
Q 003504 745 EKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPS 800 (815)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs 800 (815)
..+..+.+-+..+ ..|........+++++..+.+|.+|.-
T Consensus 626 ktYn~ILkGid~i----------------~~Pr~I~k~a~~Lik~LCr~~P~ERLG 665 (732)
T KOG0614|consen 626 KTYNLILKGIDKI----------------EFPRRITKTATDLIKKLCRDNPTERLG 665 (732)
T ss_pred HHHHHHHhhhhhh----------------hcccccchhHHHHHHHHHhcCcHhhhc
Confidence 4443333222111 225556677889999999999999974
No 398
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=2.2e-29 Score=247.13 Aligned_cols=248 Identities=22% Similarity=0.292 Sum_probs=191.8
Q ss_pred hcCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCcccHH---HHHHHHHHhcCC-CCCCceeeeeEEEeCCeeEE
Q 003504 507 TSNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGSTLTDQ---EAARELEYLGRI-KHPNLVPLTGYCIAGDQRIA 581 (815)
Q Consensus 507 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~---~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~l 581 (815)
.++|...++||+|+|+.|-.+.+ ++.+.+|+|++++....+.+ -...|-.+..+. +||.+|-+..|+......+.
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff 328 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF 328 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence 46899999999999999999995 56778999998764332222 234455555555 69999999999999999999
Q ss_pred EEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeec
Q 003504 582 IYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHR 661 (815)
Q Consensus 582 v~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHr 661 (815)
|.||+++|+|--+++..+ .++.....-....|.-||.||| +++||.|
T Consensus 329 vieyv~ggdlmfhmqrqr------------------------------klpeeharfys~ei~lal~flh---~rgiiyr 375 (593)
T KOG0695|consen 329 VIEYVNGGDLMFHMQRQR------------------------------KLPEEHARFYSAEICLALNFLH---ERGIIYR 375 (593)
T ss_pred EEEEecCcceeeehhhhh------------------------------cCcHHHhhhhhHHHHHHHHHHh---hcCeeee
Confidence 999999999987776532 2334444445667888999999 8999999
Q ss_pred cCCCCceEEcCCCCeeeccccccee-cCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCC
Q 003504 662 DIKASSVYLDMNLEPRLSDFGLAKI-FGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGD 740 (815)
Q Consensus 662 Dlk~~NIll~~~~~~kl~Dfgla~~-~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~ 740 (815)
|||.+|||+|..|.+|+.|||.++. ..++....+.+||+.|+|||++.+.. |+...|+|++||+|+||+.|+.||+.
T Consensus 376 dlkldnvlldaeghikltdygmcke~l~~gd~tstfcgtpnyiapeilrgee--ygfsvdwwalgvlmfemmagrspfdi 453 (593)
T KOG0695|consen 376 DLKLDNVLLDAEGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEE--YGFSVDWWALGVLMFEMMAGRSPFDI 453 (593)
T ss_pred eccccceEEccCCceeecccchhhcCCCCCcccccccCCCcccchhhhcccc--cCceehHHHHHHHHHHHHcCCCCcce
Confidence 9999999999999999999999985 44666778899999999999999988 78899999999999999999999986
Q ss_pred CCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCC
Q 003504 741 DYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRP 799 (815)
Q Consensus 741 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP 799 (815)
-.......+..+++-+.+-+. .++. |...+.....+.+.-+.+||.+|.
T Consensus 454 vgm~n~d~ntedylfqvilek--------qiri--prslsvkas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 454 VGMDNPDMNTEDYLFQVILEK--------QIRI--PRSLSVKASHVLKGFLNKDPKERL 502 (593)
T ss_pred ecCCCcccchhHHHHHHHhhh--------cccc--cceeehhhHHHHHHhhcCCcHHhc
Confidence 433333334444444333221 1111 333344566788889999999986
No 399
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.96 E-value=4.1e-30 Score=258.55 Aligned_cols=263 Identities=19% Similarity=0.241 Sum_probs=196.3
Q ss_pred hcCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCcccHHHHHHHHHHhcCCC-C-C----CceeeeeEEEeCCee
Q 003504 507 TSNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGSTLTDQEAARELEYLGRIK-H-P----NLVPLTGYCIAGDQR 579 (815)
Q Consensus 507 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-H-~----niv~l~g~~~~~~~~ 579 (815)
+.+|.+...+|+|.||.|-++.. ..+..||||+++. -....+...-|+++++++. + | -+|.+.+++.-.+..
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~-V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghi 166 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKN-VDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHI 166 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHH-HHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCce
Confidence 56899999999999999999984 4478999999864 1222344567999999993 2 3 378888889889999
Q ss_pred EEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCee
Q 003504 580 IAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPII 659 (815)
Q Consensus 580 ~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~iv 659 (815)
++|+|.+.- |+.+||..+ ...+........|+.|+.++++||| +.+++
T Consensus 167 CivfellG~-S~~dFlk~N----------------------------~y~~fpi~~ir~m~~QL~~sv~fLh---~~kl~ 214 (415)
T KOG0671|consen 167 CIVFELLGL-STFDFLKEN----------------------------NYIPFPIDHIRHMGYQLLESVAFLH---DLKLT 214 (415)
T ss_pred EEEEeccCh-hHHHHhccC----------------------------CccccchHHHHHHHHHHHHHHHHHH---hccee
Confidence 999998743 999999863 3567788889999999999999999 89999
Q ss_pred eccCCCCceEEcCC--------------------CCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcC
Q 003504 660 HRDIKASSVYLDMN--------------------LEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKS 719 (815)
Q Consensus 660 HrDlk~~NIll~~~--------------------~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 719 (815)
|-||||+|||+... ..+||+|||.|+..... ....+.|..|.|||++.+-. .+..+
T Consensus 215 HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~--hs~iVsTRHYRAPEViLgLG--wS~pC 290 (415)
T KOG0671|consen 215 HTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEH--HSTIVSTRHYRAPEVILGLG--WSQPC 290 (415)
T ss_pred ecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecCCcceeccC--cceeeeccccCCchheeccC--cCCcc
Confidence 99999999998431 34899999999875433 24556899999999999887 89999
Q ss_pred cchhHHHHHHHHHhCCCCCCCCCCcccc-------ccHHHHH------HHHHhcC---CC--------Ccccccccc---
Q 003504 720 DVYCYGVVLLELITGKKPLGDDYPEEKE-------GNLVSWV------RGLVRNN---KG--------SRAIDPKIR--- 772 (815)
Q Consensus 720 Dv~S~Gvvl~el~tg~~p~~~~~~~~~~-------~~~~~~~------~~~~~~~---~~--------~~~~~~~~~--- 772 (815)
||||+||||.|+++|..-|......|.- +.+...+ .++...+ +. ..+.++...
T Consensus 291 DvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~ 370 (415)
T KOG0671|consen 291 DVWSIGCILVELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKK 370 (415)
T ss_pred CceeeeeEEEEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHH
Confidence 9999999999999999998864432211 1111111 0111111 00 001111100
Q ss_pred -CCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 773 -DTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 773 -~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
.........++++|+.+++..||.+|+|+.|++.
T Consensus 371 ~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~ 405 (415)
T KOG0671|consen 371 YMLQDDLEHVQLFDLLRRMLEFDPARRITLREALS 405 (415)
T ss_pred HhccCcHHHhHHHHHHHHHHccCccccccHHHHhc
Confidence 1123455677999999999999999999999975
No 400
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.95 E-value=4.3e-31 Score=265.69 Aligned_cols=332 Identities=27% Similarity=0.421 Sum_probs=198.7
Q ss_pred EecCCCCCccCCCcccccCCCCCCEEECcCCCCCCCCcccCCCCCCCEEEccCCcCCccCCccccCCCCCcEEEccCCcC
Q 003504 33 FLASNSGLSGSVPDTTIGKLSKLQSLDLSENNITALPSDLWSLGSLKSLNLSYNRISGSLPSNIGNFGLLEVFDLSNNNF 112 (815)
Q Consensus 33 l~~~~~~~~g~~~~~~~~~l~~L~~L~Ls~n~l~~lp~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l 112 (815)
++..+|+++ ++|+ .+..+.+|..|++.+|+++++|++.-+++.|++||..+|-++ .+|..++.+.+|+.|||.+|+|
T Consensus 142 l~~~~N~i~-slp~-~~~~~~~l~~l~~~~n~l~~l~~~~i~m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki 218 (565)
T KOG0472|consen 142 LDATNNQIS-SLPE-DMVNLSKLSKLDLEGNKLKALPENHIAMKRLKHLDCNSNLLE-TLPPELGGLESLELLYLRRNKI 218 (565)
T ss_pred hhccccccc-cCch-HHHHHHHHHHhhccccchhhCCHHHHHHHHHHhcccchhhhh-cCChhhcchhhhHHHHhhhccc
Confidence 344444444 2332 344444555555555555555544444555555555555444 4444555555555555555555
Q ss_pred CCCChhhhcCCcCCCEEEcCCCcccccCCcc-cccccccceeeccCCcCCCCCCchhhccCCCCCEEEcCCCcccCCCCC
Q 003504 113 SGEIPAAISSLVSLRVLKLDGNMFQWSIPPG-LLNCQSLVTVDLSMNQLNGSLPDGFGAAFPKLKSLNLAGNEIKGRDTH 191 (815)
Q Consensus 113 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~-~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~~~ 191 (815)
. .+| .|.++..|.+|+++.|+|. .+|.. ..++++|..|||.+|+++ +.|+++. -+.+|++|+|++|.|+.+|..
T Consensus 219 ~-~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~c-lLrsL~rLDlSNN~is~Lp~s 293 (565)
T KOG0472|consen 219 R-FLP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEIC-LLRSLERLDLSNNDISSLPYS 293 (565)
T ss_pred c-cCC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHH-HhhhhhhhcccCCccccCCcc
Confidence 4 333 4555555555555555554 23322 224555555555555554 5555543 244455555555555555555
Q ss_pred CCCCCCCCeEeccCCcCCCcchhhh-------------------------------------------hcccceeeeccc
Q 003504 192 FAGLKSITNLNISGNLFQGSVMGVF-------------------------------------------LESLEVIDLRSN 228 (815)
Q Consensus 192 ~~~l~~L~~L~Ls~N~l~~~~~~~~-------------------------------------------l~~L~~L~L~~N 228 (815)
++++ .|+.|-+.+|.+.++-.... ..+.+.|+++.-
T Consensus 294 Lgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~ 372 (565)
T KOG0472|consen 294 LGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDK 372 (565)
T ss_pred cccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhhhhhhhhccccc
Confidence 5555 55555555554432211100 011233333333
Q ss_pred cccCcccccccccccCCccceEEEcCCCccC-----------------------cchhhccccCCCCCEEEecCCcCcCC
Q 003504 229 QFQGHISQVQFNSSYNWSRLVYVDLSENQLS-----------------------GEIFHNFSQAQNLKHLSLAYNRFTRQ 285 (815)
Q Consensus 229 ~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-----------------------~~~~~~~~~l~~L~~L~L~~N~l~~~ 285 (815)
+++..+.++. .+. .-.-++.++++.|++. +.+|..+.++++|..|+|++|.+..+
T Consensus 373 qlt~VPdEVf-ea~-~~~~Vt~VnfskNqL~elPk~L~~lkelvT~l~lsnn~isfv~~~l~~l~kLt~L~L~NN~Ln~L 450 (565)
T KOG0472|consen 373 QLTLVPDEVF-EAA-KSEIVTSVNFSKNQLCELPKRLVELKELVTDLVLSNNKISFVPLELSQLQKLTFLDLSNNLLNDL 450 (565)
T ss_pred ccccCCHHHH-HHh-hhcceEEEecccchHhhhhhhhHHHHHHHHHHHhhcCccccchHHHHhhhcceeeecccchhhhc
Confidence 3333222211 000 0011455555555543 25566778899999999999999888
Q ss_pred CccccccccCCCeEecCCCcCcCCCchhhhcCCCCCEEeCCCCcCCCCCCcc--CCCCccEEEccCCcCcccCChHHhhc
Q 003504 286 EFPQIGTLLGLEHLNLSRTSLIGDIPSEILQLSSLHTLDLSMNHLTGQIPTV--SAKNLGIIDMSHNNLSGEIPASLLEK 363 (815)
Q Consensus 286 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~--~~~~L~~L~ls~N~l~~~~p~~~~~~ 363 (815)
| ..++.+..|+.|++|.|++. .+|..+..+..|+++-.++|++....|.. .+.+|.+|||.+|.|. .||+ .+++
T Consensus 451 P-~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq-~IPp-~Lgn 526 (565)
T KOG0472|consen 451 P-EEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQ-QIPP-ILGN 526 (565)
T ss_pred c-hhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchh-hCCh-hhcc
Confidence 7 67888888999999999987 78999999999999999999999877763 7789999999999998 7885 5799
Q ss_pred CCCCceeeccCCCCcc
Q 003504 364 LPQMERFNFSYNNLTL 379 (815)
Q Consensus 364 l~~l~~l~l~~N~l~~ 379 (815)
+.+|+.|.+.||++..
T Consensus 527 mtnL~hLeL~gNpfr~ 542 (565)
T KOG0472|consen 527 MTNLRHLELDGNPFRQ 542 (565)
T ss_pred ccceeEEEecCCccCC
Confidence 9999999999999983
No 401
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=1.5e-29 Score=241.98 Aligned_cols=265 Identities=20% Similarity=0.269 Sum_probs=191.3
Q ss_pred CCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecC--CcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCC-----eeE
Q 003504 509 NFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHG--STLTDQEAARELEYLGRIKHPNLVPLTGYCIAGD-----QRI 580 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~-----~~~ 580 (815)
+.+..+.||-|+||.||.++. ++|+.||.|++..- .-...+.+-+|++++..++|.|++..++...... +.|
T Consensus 54 Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiY 133 (449)
T KOG0664|consen 54 DIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELY 133 (449)
T ss_pred cCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHH
Confidence 344468999999999999984 68999999988542 2234567889999999999999999998776543 567
Q ss_pred EEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeee
Q 003504 581 AIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIH 660 (815)
Q Consensus 581 lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivH 660 (815)
+++|.|.. +|...+-. ...++-....-+..||.+||.||| +.+|.|
T Consensus 134 V~TELmQS-DLHKIIVS------------------------------PQ~Ls~DHvKVFlYQILRGLKYLH---sA~ILH 179 (449)
T KOG0664|consen 134 VLTELMQS-DLHKIIVS------------------------------PQALTPDHVKVFVYQILRGLKYLH---TANILH 179 (449)
T ss_pred HHHHHHHh-hhhheecc------------------------------CCCCCcchhhhhHHHHHhhhHHHh---hcchhh
Confidence 78888876 77666642 233444455668899999999999 899999
Q ss_pred ccCCCCceEEcCCCCeeecccccceecCCCC--ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCC
Q 003504 661 RDIKASSVYLDMNLEPRLSDFGLAKIFGNGL--DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738 (815)
Q Consensus 661 rDlk~~NIll~~~~~~kl~Dfgla~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~ 738 (815)
|||||-|.|++.+..+||+|||+++....+. ..+..+-|..|.|||++++... |+.+.||||.||++.|++.++--|
T Consensus 180 RDIKPGNLLVNSNCvLKICDFGLARvee~d~~~hMTqEVVTQYYRAPEiLMGaRh-Ys~AvDiWSVGCIFaELLgRrILF 258 (449)
T KOG0664|consen 180 RDIKPGNLLVNSNCILKICDFGLARTWDQRDRLNMTHEVVTQYYRAPELLMGARR-YTGAVDIWSVGCIFAELLQRKILF 258 (449)
T ss_pred ccCCCccEEeccCceEEecccccccccchhhhhhhHHHHHHHHhccHHHhhcchh-hcCccceehhhHHHHHHHhhhhhh
Confidence 9999999999999999999999999876543 2334457889999999998876 788999999999999999998888
Q ss_pred CCCCCccccccHHHHH-------HHHHhcCCCCcccccccc---------CCCCHHHHHHHHHHHhhccccCCCCCCCHH
Q 003504 739 GDDYPEEKEGNLVSWV-------RGLVRNNKGSRAIDPKIR---------DTGPEKQMEEALKIGYLCTADLPLKRPSMQ 802 (815)
Q Consensus 739 ~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ 802 (815)
....+-+..+-+.+.. .+...+.....++....+ ...+...-.+...+....+..||++|.+.+
T Consensus 259 QAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~ 338 (449)
T KOG0664|consen 259 QAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVE 338 (449)
T ss_pred hccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHh
Confidence 7544433222222211 011111111111111111 111223334556777788999999999988
Q ss_pred HHHHHH
Q 003504 803 QIVGLL 808 (815)
Q Consensus 803 ~v~~~L 808 (815)
+.+..+
T Consensus 339 ~A~~~~ 344 (449)
T KOG0664|consen 339 EALQHR 344 (449)
T ss_pred hhcccc
Confidence 876543
No 402
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.95 E-value=3.2e-30 Score=284.61 Aligned_cols=342 Identities=30% Similarity=0.354 Sum_probs=256.0
Q ss_pred CeEEEEecCCCCCccCCCcccccCCCCCCEEECcCCCCCCCCcccCCCCCCCEEEccCCcCCccCCccccCCCCCcEEEc
Q 003504 28 QHVTDFLASNSGLSGSVPDTTIGKLSKLQSLDLSENNITALPSDLWSLGSLKSLNLSYNRISGSLPSNIGNFGLLEVFDL 107 (815)
Q Consensus 28 ~~~~~l~~~~~~~~g~~~~~~~~~l~~L~~L~Ls~n~l~~lp~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L 107 (815)
.++..+++++|.++ .+|. .+..+.+|+.|+++.|-|..+|.++..+.+|++|+|.+|.+. ..|..+..+++|++||+
T Consensus 45 v~L~~l~lsnn~~~-~fp~-~it~l~~L~~ln~s~n~i~~vp~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~Ldl 121 (1081)
T KOG0618|consen 45 VKLKSLDLSNNQIS-SFPI-QITLLSHLRQLNLSRNYIRSVPSSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDL 121 (1081)
T ss_pred eeeEEeeccccccc-cCCc-hhhhHHHHhhcccchhhHhhCchhhhhhhcchhheeccchhh-cCchhHHhhhccccccc
Confidence 35788899998876 5665 578888899999999999988888888888999999988887 78888888888888888
Q ss_pred cCCcCCCCChhhhcCCc----------------------------------------CCCE-EEcCCCcccccC------
Q 003504 108 SNNNFSGEIPAAISSLV----------------------------------------SLRV-LKLDGNMFQWSI------ 140 (815)
Q Consensus 108 s~N~l~~~~p~~~~~l~----------------------------------------~L~~-L~L~~N~l~~~~------ 140 (815)
|.|++... |..+..++ +|++ |+|+.|.+....
T Consensus 122 S~N~f~~~-Pl~i~~lt~~~~~~~s~N~~~~~lg~~~ik~~~l~~n~l~~~~~~~i~~l~~~ldLr~N~~~~~dls~~~~ 200 (1081)
T KOG0618|consen 122 SFNHFGPI-PLVIEVLTAEEELAASNNEKIQRLGQTSIKKLDLRLNVLGGSFLIDIYNLTHQLDLRYNEMEVLDLSNLAN 200 (1081)
T ss_pred chhccCCC-chhHHhhhHHHHHhhhcchhhhhhccccchhhhhhhhhcccchhcchhhhheeeecccchhhhhhhhhccc
Confidence 88887632 22111111 1111 444444433100
Q ss_pred -----------------------------C----cccccccccceeeccCCcCCCCCCchhhccCCCCCEEEcCCCcccC
Q 003504 141 -----------------------------P----PGLLNCQSLVTVDLSMNQLNGSLPDGFGAAFPKLKSLNLAGNEIKG 187 (815)
Q Consensus 141 -----------------------------~----~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~ 187 (815)
| ..-..-.+|+++++++|+++ .+| ++...+.+|+.|...+|+|+.
T Consensus 201 l~~l~c~rn~ls~l~~~g~~l~~L~a~~n~l~~~~~~p~p~nl~~~dis~n~l~-~lp-~wi~~~~nle~l~~n~N~l~~ 278 (1081)
T KOG0618|consen 201 LEVLHCERNQLSELEISGPSLTALYADHNPLTTLDVHPVPLNLQYLDISHNNLS-NLP-EWIGACANLEALNANHNRLVA 278 (1081)
T ss_pred hhhhhhhhcccceEEecCcchheeeeccCcceeeccccccccceeeecchhhhh-cch-HHHHhcccceEecccchhHHh
Confidence 0 00011245778888888887 788 444568899999999988877
Q ss_pred CCCCCCCCCCCCeEeccCCcCCCcchhhh-hcccceeeeccccccCcccc---------------------cccccccCC
Q 003504 188 RDTHFAGLKSITNLNISGNLFQGSVMGVF-LESLEVIDLRSNQFQGHISQ---------------------VQFNSSYNW 245 (815)
Q Consensus 188 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~-l~~L~~L~L~~N~l~~~~~~---------------------~~~~~~~~l 245 (815)
++..+..+++|+.|.+.+|.++.+++..- +++|+.|+|..|+|...+.. .+...-..+
T Consensus 279 lp~ri~~~~~L~~l~~~~nel~yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~ 358 (1081)
T KOG0618|consen 279 LPLRISRITSLVSLSAAYNELEYIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNH 358 (1081)
T ss_pred hHHHHhhhhhHHHHHhhhhhhhhCCCcccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhccccccccccchhh
Confidence 77777777777777777777776666544 66777777777766533221 001111235
Q ss_pred ccceEEEcCCCccCcchhhccccCCCCCEEEecCCcCcCCCccccccccCCCeEecCCCcCcCCCchhhhcCCCCCEEeC
Q 003504 246 SRLVYVDLSENQLSGEIFHNFSQAQNLKHLSLAYNRFTRQEFPQIGTLLGLEHLNLSRTSLIGDIPSEILQLSSLHTLDL 325 (815)
Q Consensus 246 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 325 (815)
+.|+.|++.+|.+++.....+.++.+|+.|+|++|++..++...+.++..|++|+||+|+|+ .+|.++..++.|++|..
T Consensus 359 ~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~a 437 (1081)
T KOG0618|consen 359 AALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRA 437 (1081)
T ss_pred HHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhh
Confidence 67999999999999999999999999999999999999999889999999999999999998 78899999999999999
Q ss_pred CCCcCCCCCCccCCCCccEEEccCCcCcccCChHHhhcCCCCceeeccCCCC
Q 003504 326 SMNHLTGQIPTVSAKNLGIIDMSHNNLSGEIPASLLEKLPQMERFNFSYNNL 377 (815)
Q Consensus 326 s~N~l~~~~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~l~~l~~l~l~~N~l 377 (815)
.+|+|...+....+++|+.+|+|.|+|+- +-.......++|+.||++||.-
T Consensus 438 hsN~l~~fPe~~~l~qL~~lDlS~N~L~~-~~l~~~~p~p~LkyLdlSGN~~ 488 (1081)
T KOG0618|consen 438 HSNQLLSFPELAQLPQLKVLDLSCNNLSE-VTLPEALPSPNLKYLDLSGNTR 488 (1081)
T ss_pred cCCceeechhhhhcCcceEEecccchhhh-hhhhhhCCCcccceeeccCCcc
Confidence 99999976644588999999999999973 2211222348999999999973
No 403
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.95 E-value=9.5e-27 Score=233.95 Aligned_cols=210 Identities=33% Similarity=0.486 Sum_probs=180.6
Q ss_pred ecccCCeeeEEEEcCC-CcEEEEEEeecCCcc-cHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeCCCCChhh
Q 003504 516 LAEGKFGPVYRGFLPG-GIHVAVKVLVHGSTL-TDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQN 593 (815)
Q Consensus 516 ig~G~~g~Vy~~~~~~-~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL~~ 593 (815)
||+|.+|.||++...+ +..+++|++...... ..+.+.+|++.++.++|++++++++++......++++||+++++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 6899999999999754 889999998764332 34679999999999999999999999999899999999999999999
Q ss_pred hhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCceEEcC-
Q 003504 594 LLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDM- 672 (815)
Q Consensus 594 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NIll~~- 672 (815)
++... ...+++..+..++.+++++++||| +.+++|+||+|.||+++.
T Consensus 81 ~~~~~-----------------------------~~~~~~~~~~~~~~~l~~~l~~lh---~~~~~H~dl~~~ni~~~~~ 128 (215)
T cd00180 81 LLKEN-----------------------------EGKLSEDEILRILLQILEGLEYLH---SNGIIHRDLKPENILLDSD 128 (215)
T ss_pred HHHhc-----------------------------cCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHhhEEEeCC
Confidence 98642 135788899999999999999999 789999999999999999
Q ss_pred CCCeeecccccceecCCCC-ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCccccccHH
Q 003504 673 NLEPRLSDFGLAKIFGNGL-DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLV 751 (815)
Q Consensus 673 ~~~~kl~Dfgla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~ 751 (815)
++.++|+|||.+....... ......+...|++||..... ...+.++|+|++|++++++
T Consensus 129 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~~D~~~lg~~~~~l-------------------- 187 (215)
T cd00180 129 NGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGK-GYYSEKSDIWSLGVILYEL-------------------- 187 (215)
T ss_pred CCcEEEecCCceEEccCCcchhhcccCCCCccChhHhccc-CCCCchhhhHHHHHHHHHH--------------------
Confidence 8999999999998765432 12334578899999988765 1268899999999999999
Q ss_pred HHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003504 752 SWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGL 807 (815)
Q Consensus 752 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~ 807 (815)
.++.+++..|+..+|++||++.++++.
T Consensus 188 -----------------------------~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 -----------------------------PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred -----------------------------HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 457899999999999999999999864
No 404
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.94 E-value=8.7e-28 Score=252.09 Aligned_cols=198 Identities=22% Similarity=0.297 Sum_probs=168.7
Q ss_pred hcCCCCCCeecccCCeeeEEEEcC-CCcEEEEEEeecCCcccH--------HHHHHHHHHhcCCC---CCCceeeeeEEE
Q 003504 507 TSNFDRGTLLAEGKFGPVYRGFLP-GGIHVAVKVLVHGSTLTD--------QEAARELEYLGRIK---HPNLVPLTGYCI 574 (815)
Q Consensus 507 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~--------~~~~~E~~~l~~l~---H~niv~l~g~~~ 574 (815)
-.+|...+.+|.|+||.|+.|..+ ....|+||.+.+...... ..+-.||.||+.++ |+||++++++|+
T Consensus 560 ~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFE 639 (772)
T KOG1152|consen 560 FSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFE 639 (772)
T ss_pred cccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheee
Confidence 356888999999999999999964 466799999876533221 13457999999997 999999999999
Q ss_pred eCCeeEEEEEeCC-CCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcC
Q 003504 575 AGDQRIAIYDYME-NGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHG 653 (815)
Q Consensus 575 ~~~~~~lv~ey~~-~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~ 653 (815)
+++.++++||-.- +-+|.+++... ..++.....-|+.||+.|+++||
T Consensus 640 ddd~yyl~te~hg~gIDLFd~IE~k------------------------------p~m~E~eAk~IFkQV~agi~hlh-- 687 (772)
T KOG1152|consen 640 DDDYYYLETEVHGEGIDLFDFIEFK------------------------------PRMDEPEAKLIFKQVVAGIKHLH-- 687 (772)
T ss_pred cCCeeEEEecCCCCCcchhhhhhcc------------------------------CccchHHHHHHHHHHHhcccccc--
Confidence 9999999999764 44999999652 34667778889999999999999
Q ss_pred CCCCeeeccCCCCceEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh
Q 003504 654 CSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT 733 (815)
Q Consensus 654 ~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t 733 (815)
+++|||||||-+||.++.+|-+||+|||.|-....+ .....+||.+|.|||++.+..+ -+..-|||++|+++|.++.
T Consensus 688 -~~~ivhrdikdenvivd~~g~~klidfgsaa~~ksg-pfd~f~gtv~~aapevl~g~~y-~gk~qdiwalgillytivy 764 (772)
T KOG1152|consen 688 -DQGIVHRDIKDENVIVDSNGFVKLIDFGSAAYTKSG-PFDVFVGTVDYAAPEVLGGEKY-LGKPQDIWALGILLYTIVY 764 (772)
T ss_pred -ccCceecccccccEEEecCCeEEEeeccchhhhcCC-CcceeeeeccccchhhhCCCcc-CCCcchhhhhhheeeEEEe
Confidence 899999999999999999999999999998776554 4566789999999999988874 5777899999999999999
Q ss_pred CCCCCC
Q 003504 734 GKKPLG 739 (815)
Q Consensus 734 g~~p~~ 739 (815)
...||.
T Consensus 765 kenpyy 770 (772)
T KOG1152|consen 765 KENPYY 770 (772)
T ss_pred ccCCCc
Confidence 999985
No 405
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.94 E-value=4.8e-28 Score=258.23 Aligned_cols=254 Identities=23% Similarity=0.302 Sum_probs=204.8
Q ss_pred hcCCCCCCeecccCCeeeEEEE-cCCCcEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEe
Q 003504 507 TSNFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDY 585 (815)
Q Consensus 507 ~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 585 (815)
.++|+...++|.|.||.||||+ ...+...|||+++-.......-...|+-+++..+|||||.++|.+...+..++.|||
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEy 93 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEY 93 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEe
Confidence 4678899999999999999999 567889999999877677777788999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCC
Q 003504 586 MENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKA 665 (815)
Q Consensus 586 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~ 665 (815)
|.+|+|.+..|. ..+++..+...+++...+||+||| +++=+|||||-
T Consensus 94 cgggslQdiy~~------------------------------TgplselqiayvcRetl~gl~ylh---s~gk~hRdiKG 140 (829)
T KOG0576|consen 94 CGGGSLQDIYHV------------------------------TGPLSELQIAYVCRETLQGLKYLH---SQGKIHRDIKG 140 (829)
T ss_pred cCCCcccceeee------------------------------cccchhHHHHHHHhhhhccchhhh---cCCcccccccc
Confidence 999999998774 346777777788899999999999 89999999999
Q ss_pred CceEEcCCCCeeecccccceecCCCC-ccccccccccccCCcccCCC-CCCCCCcCcchhHHHHHHHHHhCCCCCCCCCC
Q 003504 666 SSVYLDMNLEPRLSDFGLAKIFGNGL-DEEIARGSPGYIPPEFAQPD-SDFPTPKSDVYCYGVVLLELITGKKPLGDDYP 743 (815)
Q Consensus 666 ~NIll~~~~~~kl~Dfgla~~~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~ 743 (815)
.||++++.|.+|++|||.+-.+.... ....+.||+.|||||+..-+ .+.|..++|||+.|+...|+-.-++|..+.-+
T Consensus 141 anilltd~gDvklaDfgvsaqitati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhp 220 (829)
T KOG0576|consen 141 ANILLTDEGDVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHP 220 (829)
T ss_pred cceeecccCceeecccCchhhhhhhhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccch
Confidence 99999999999999999987766443 34566799999999986532 33478999999999999999888887543211
Q ss_pred ccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 744 EEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 744 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
-. +-.++. ...++|.-..+ .....+.+.++++-|+.++|++||+++.++.
T Consensus 221 mr--------~l~LmT----kS~~qpp~lkD-k~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 221 MR--------ALFLMT----KSGFQPPTLKD-KTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred HH--------HHHHhh----ccCCCCCcccC-CccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 10 001111 11222222222 4456778899999999999999999987754
No 406
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.94 E-value=2.2e-26 Score=234.26 Aligned_cols=198 Identities=33% Similarity=0.492 Sum_probs=169.8
Q ss_pred CCCCCeecccCCeeeEEEEcCC-CcEEEEEEeecCCcc-cHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeCC
Q 003504 510 FDRGTLLAEGKFGPVYRGFLPG-GIHVAVKVLVHGSTL-TDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYME 587 (815)
Q Consensus 510 ~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 587 (815)
|...+.||.|++|.||+|...+ +..+|+|.+...... ..+.+.+|++.+++++|+|++++++++......++++||++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 4567899999999999999765 889999999765444 56788999999999999999999999999899999999999
Q ss_pred CCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCc
Q 003504 588 NGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASS 667 (815)
Q Consensus 588 ~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~N 667 (815)
+++|.+++... ...+++.....++.+++.++.||| ..+++|+|++|+|
T Consensus 81 ~~~L~~~~~~~-----------------------------~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~di~~~n 128 (225)
T smart00221 81 GGDLFDYLRKK-----------------------------GGKLSEEEARFYLRQILEALEYLH---SLGIVHRDLKPEN 128 (225)
T ss_pred CCCHHHHHHhc-----------------------------ccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHH
Confidence 99999999752 111678889999999999999999 7899999999999
Q ss_pred eEEcCCCCeeecccccceecCCCC--ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCC
Q 003504 668 VYLDMNLEPRLSDFGLAKIFGNGL--DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGD 740 (815)
Q Consensus 668 Ill~~~~~~kl~Dfgla~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~ 740 (815)
|+++.++.++|+|||.+....... ......++..|++||... ....++.++|||+||++++|+++|+.||..
T Consensus 129 i~v~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~~pe~~~-~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 129 ILLGMDGLVKLADFGLARFIHRDLAALLKTVKGTPFYLAPEVLL-GGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred EEEcCCCCEEEeeCceeeEecCcccccccceeccCCcCCHhHhc-CCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 999999999999999998776442 223445788999999884 222367799999999999999999999964
No 407
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.94 E-value=5.2e-27 Score=230.76 Aligned_cols=259 Identities=21% Similarity=0.210 Sum_probs=191.0
Q ss_pred CCCCCCeecccCCeeeEEEE-cCCCcEEEEEEeecC--CcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCC------ee
Q 003504 509 NFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHG--STLTDQEAARELEYLGRIKHPNLVPLTGYCIAGD------QR 579 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~------~~ 579 (815)
+|.-.+.+|.|.- .|.-|. .-.+++||+|.+... .....+...+|...+..+.|+||++++.++.... +.
T Consensus 18 Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~ 96 (369)
T KOG0665|consen 18 RYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEV 96 (369)
T ss_pred eeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhH
Confidence 4555677777776 444443 234788999987543 2344566789999999999999999999887543 56
Q ss_pred EEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCee
Q 003504 580 IAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPII 659 (815)
Q Consensus 580 ~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~iv 659 (815)
|+|||||.. +|...++. .++-.....|..|+..|+.||| +.+|+
T Consensus 97 y~v~e~m~~-nl~~vi~~--------------------------------elDH~tis~i~yq~~~~ik~lh---s~~Ii 140 (369)
T KOG0665|consen 97 YLVMELMDA-NLCQVILM--------------------------------ELDHETISYILYQMLCGIKHLH---SAGII 140 (369)
T ss_pred HHHHHhhhh-HHHHHHHH--------------------------------hcchHHHHHHHHHHHHHHHHHH---hccee
Confidence 899999976 88888863 3566777889999999999999 89999
Q ss_pred eccCCCCceEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCC
Q 003504 660 HRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLG 739 (815)
Q Consensus 660 HrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~ 739 (815)
||||||+||++..+..+||.|||+|+........+..+.|..|.|||++.+.. +.+.+||||.||++.||++|+--|.
T Consensus 141 hRdLkPsnivv~~~~~lKi~dfg~ar~e~~~~~mtpyVvtRyyrapevil~~~--~ke~vdiwSvGci~gEli~~~Vlf~ 218 (369)
T KOG0665|consen 141 HRDLKPSNIVVNSDCTLKILDFGLARTEDTDFMMTPYVVTRYYRAPEVILGMG--YKENVDIWSVGCIMGELILGTVLFP 218 (369)
T ss_pred ecccCcccceecchhheeeccchhhcccCcccccCchhheeeccCchheeccC--CcccchhhhhhhHHHHHhhceEEec
Confidence 99999999999999999999999999877665666778999999999998887 7899999999999999999998876
Q ss_pred CCCCcccc---------------ccHHHHHHHHHhcCCC------Ccccc-ccccC--CCCHHHHHHHHHHHhhccccCC
Q 003504 740 DDYPEEKE---------------GNLVSWVRGLVRNNKG------SRAID-PKIRD--TGPEKQMEEALKIGYLCTADLP 795 (815)
Q Consensus 740 ~~~~~~~~---------------~~~~~~~~~~~~~~~~------~~~~~-~~~~~--~~~~~~~~~~~~l~~~Cl~~dP 795 (815)
+...-+.. .++..-++.+++.... .+.+. ..+.. +.+.-......+++.+++..+|
T Consensus 219 g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~p 298 (369)
T KOG0665|consen 219 GKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDP 298 (369)
T ss_pred CchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccCh
Confidence 53211111 1111112222221100 11111 11111 1122234567899999999999
Q ss_pred CCCCCHHHHHH
Q 003504 796 LKRPSMQQIVG 806 (815)
Q Consensus 796 ~~RPs~~~v~~ 806 (815)
++|.++++++.
T Consensus 299 e~Risv~daL~ 309 (369)
T KOG0665|consen 299 EKRISVDDALR 309 (369)
T ss_pred hhcccHHHHhc
Confidence 99999999875
No 408
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.94 E-value=1.1e-28 Score=248.27 Aligned_cols=293 Identities=25% Similarity=0.267 Sum_probs=234.4
Q ss_pred EEEecCCCCCccCCCcccccCCCCCCEEECcCCCCCCCCcccCC-CCCCCEEEccCCcCCccCCccccCCCCCcEE-Ecc
Q 003504 31 TDFLASNSGLSGSVPDTTIGKLSKLQSLDLSENNITALPSDLWS-LGSLKSLNLSYNRISGSLPSNIGNFGLLEVF-DLS 108 (815)
Q Consensus 31 ~~l~~~~~~~~g~~~~~~~~~l~~L~~L~Ls~n~l~~lp~~~~~-l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L-~Ls 108 (815)
..++.++.+++ .||.. --+....|+|..|+|+.||+..|+ +++|++|||++|+|+.+.|++|.++++|..| +++
T Consensus 49 ~~VdCr~~GL~-eVP~~---LP~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg 124 (498)
T KOG4237|consen 49 GIVDCRGKGLT-EVPAN---LPPETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYG 124 (498)
T ss_pred ceEEccCCCcc-cCccc---CCCcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhc
Confidence 34456666665 44432 123568899999999999999886 9999999999999999999999999998777 455
Q ss_pred CCcCCCCChhhhcCCcCCCEEEcCCCcccccCCcccccccccceeeccCCcCCCCCCchhhccCCCCCEEEcCCCcccC-
Q 003504 109 NNNFSGEIPAAISSLVSLRVLKLDGNMFQWSIPPGLLNCQSLVTVDLSMNQLNGSLPDGFGAAFPKLKSLNLAGNEIKG- 187 (815)
Q Consensus 109 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~- 187 (815)
+|+|+.+..++|.+|..|+.|.|.-|++.-...+.|..+++|..|.+.+|.+. .++...+..+..++.+.+..|.+-.
T Consensus 125 ~NkI~~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q-~i~~~tf~~l~~i~tlhlA~np~icd 203 (498)
T KOG4237|consen 125 NNKITDLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQ-SICKGTFQGLAAIKTLHLAQNPFICD 203 (498)
T ss_pred CCchhhhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhh-hhccccccchhccchHhhhcCccccc
Confidence 59999998999999999999999999999888899999999999999999998 8998888889999999999998321
Q ss_pred ------------CCCCCCCCCCCCeEeccCCcCCCcchhhhhccccee--eeccccccCcccccccccccCCccceEEEc
Q 003504 188 ------------RDTHFAGLKSITNLNISGNLFQGSVMGVFLESLEVI--DLRSNQFQGHISQVQFNSSYNWSRLVYVDL 253 (815)
Q Consensus 188 ------------~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~L~~L--~L~~N~l~~~~~~~~~~~~~~l~~L~~L~L 253 (815)
.+..+++..-..-..|.++++..+....|..+++.+ .++.+..- ....+...|..+++|++|+|
T Consensus 204 CnL~wla~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~--d~~cP~~cf~~L~~L~~lnl 281 (498)
T KOG4237|consen 204 CNLPWLADDLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFP--DSICPAKCFKKLPNLRKLNL 281 (498)
T ss_pred cccchhhhHHhhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCc--CCcChHHHHhhcccceEecc
Confidence 234566666666677777788777777775555444 23322211 12234445778888888888
Q ss_pred CCCccCcchhhccccCCCCCEEEecCCcCcCCCccccccccCCCeEecCCCcCcCCCchhhhcCCCCCEEeCCCCcC
Q 003504 254 SENQLSGEIFHNFSQAQNLKHLSLAYNRFTRQEFPQIGTLLGLEHLNLSRTSLIGDIPSEILQLSSLHTLDLSMNHL 330 (815)
Q Consensus 254 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l 330 (815)
++|+|+.+-+.+|.+...+++|.|..|+|..+....|.++.+|+.|+|.+|+|+...|.+|..+.+|.+|+|-.|.+
T Consensus 282 snN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~ 358 (498)
T KOG4237|consen 282 SNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPF 358 (498)
T ss_pred CCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcc
Confidence 88888888888888888888888888888777777888888888888888888888888888888888888887776
No 409
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.93 E-value=3.9e-26 Score=218.94 Aligned_cols=251 Identities=20% Similarity=0.287 Sum_probs=183.8
Q ss_pred CCCCCCeecccCCeeeEEEEcC-CCcEEEEEEeecCCcccHHHHHHHHHHhcCC-CCCCceeeeeE-EEeCCeeEEEEEe
Q 003504 509 NFDRGTLLAEGKFGPVYRGFLP-GGIHVAVKVLVHGSTLTDQEAARELEYLGRI-KHPNLVPLTGY-CIAGDQRIAIYDY 585 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~-~~~~~~~~lv~ey 585 (815)
.|.+.+.+|+|.||.+-.+.++ ..+.+|+|.+.. ......+|.+|...--.| .|.||+.-++. ++..+.+..++||
T Consensus 25 ~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~-p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~ 103 (378)
T KOG1345|consen 25 VYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPR-PQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQEF 103 (378)
T ss_pred hhhHHHHhcccceeeEEeeeccCCceEEEeeccCc-chhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeecc
Confidence 5778899999999999999975 567899998765 456678999998876666 48999988765 4556778899999
Q ss_pred CCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCC
Q 003504 586 MENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKA 665 (815)
Q Consensus 586 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~ 665 (815)
+|.|+|.+-+... .+-.....+++.|++.|+.||| +..+||||||.
T Consensus 104 aP~gdL~snv~~~-------------------------------GigE~~~K~v~~ql~SAi~fMH---sknlVHRdlK~ 149 (378)
T KOG1345|consen 104 APRGDLRSNVEAA-------------------------------GIGEANTKKVFAQLLSAIEFMH---SKNLVHRDLKA 149 (378)
T ss_pred CccchhhhhcCcc-------------------------------cccHHHHHHHHHHHHHHHHHhh---ccchhhccccc
Confidence 9999999887542 2445567889999999999999 89999999999
Q ss_pred CceEEc--CCCCeeecccccceecCCCCccccccccccccCCcccCCC---CCCCCCcCcchhHHHHHHHHHhCCCCCCC
Q 003504 666 SSVYLD--MNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPD---SDFPTPKSDVYCYGVVLLELITGKKPLGD 740 (815)
Q Consensus 666 ~NIll~--~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~ 740 (815)
+||||- +...+|++|||.++..+.... ...-+..|.|||..... .....+.+|||.||++++.++||+.||.-
T Consensus 150 eNiLif~~df~rvKlcDFG~t~k~g~tV~--~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQk 227 (378)
T KOG1345|consen 150 ENILIFDADFYRVKLCDFGLTRKVGTTVK--YLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQK 227 (378)
T ss_pred ceEEEecCCccEEEeeecccccccCceeh--hhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchh
Confidence 999984 345799999999987654321 12235679999975432 22357789999999999999999999984
Q ss_pred CCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 741 DYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 741 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
+. -.......|.+-.-+.+. .++.. .....+.++.+.++-+.++|++|=...++.+
T Consensus 228 a~--~~d~~Y~~~~~w~~rk~~---~~P~~-----F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk 283 (378)
T KOG1345|consen 228 AS--IMDKPYWEWEQWLKRKNP---ALPKK-----FNPFSEKALRLFKKSLTPRFKDRCKIWTAKK 283 (378)
T ss_pred hh--ccCchHHHHHHHhcccCc---cCchh-----hcccCHHHHHHHHHhcCCcccccchhHHHHH
Confidence 22 223344455442222211 11111 1223456778888999999999944444433
No 410
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.93 E-value=4.8e-25 Score=252.72 Aligned_cols=260 Identities=22% Similarity=0.230 Sum_probs=161.0
Q ss_pred CCCEEECcCCCCCCCCcccCCCCCCCEEEccCCcCCccCCccccCCCCCcEEEccCCcCCCCChhhhcCCcCCCEEEcCC
Q 003504 54 KLQSLDLSENNITALPSDLWSLGSLKSLNLSYNRISGSLPSNIGNFGLLEVFDLSNNNFSGEIPAAISSLVSLRVLKLDG 133 (815)
Q Consensus 54 ~L~~L~Ls~n~l~~lp~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 133 (815)
.-..|+|++|+|+++|..+. ++|+.|+|++|+|+. +|. .+++|++|+|++|+|+.+ |.. .++|+.|+|++
T Consensus 202 ~~~~LdLs~~~LtsLP~~l~--~~L~~L~L~~N~Lt~-LP~---lp~~Lk~LdLs~N~LtsL-P~l---p~sL~~L~Ls~ 271 (788)
T PRK15387 202 GNAVLNVGESGLTTLPDCLP--AHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLTSL-PVL---PPGLLELSIFS 271 (788)
T ss_pred CCcEEEcCCCCCCcCCcchh--cCCCEEEccCCcCCC-CCC---CCCCCcEEEecCCccCcc-cCc---ccccceeeccC
Confidence 35678888888888887665 478888888888884 554 246788888888888844 432 45788888888
Q ss_pred CcccccCCcccccccccceeeccCCcCCCCCCchhhccCCCCCEEEcCCCcccCCCCCCCCCCCCCeEeccCCcCCCcch
Q 003504 134 NMFQWSIPPGLLNCQSLVTVDLSMNQLNGSLPDGFGAAFPKLKSLNLAGNEIKGRDTHFAGLKSITNLNISGNLFQGSVM 213 (815)
Q Consensus 134 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 213 (815)
|.|+ .+|..+ ++|+.|+|++|+|+ .+|.. +++|+.|+|++|+|+.++... .+|+.|++++|.|+.+|.
T Consensus 272 N~L~-~Lp~lp---~~L~~L~Ls~N~Lt-~LP~~----p~~L~~LdLS~N~L~~Lp~lp---~~L~~L~Ls~N~L~~LP~ 339 (788)
T PRK15387 272 NPLT-HLPALP---SGLCKLWIFGNQLT-SLPVL----PPGLQELSVSDNQLASLPALP---SELCKLWAYNNQLTSLPT 339 (788)
T ss_pred Cchh-hhhhch---hhcCEEECcCCccc-ccccc----ccccceeECCCCccccCCCCc---ccccccccccCccccccc
Confidence 8887 355433 56778888888887 66652 467888888888887765422 356677778887777664
Q ss_pred hhhhcccceeeeccccccCcccccccccccCCccceEEEcCCCccCcchhhccccCCCCCEEEecCCcCcCCCccccccc
Q 003504 214 GVFLESLEVIDLRSNQFQGHISQVQFNSSYNWSRLVYVDLSENQLSGEIFHNFSQAQNLKHLSLAYNRFTRQEFPQIGTL 293 (815)
Q Consensus 214 ~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 293 (815)
+..+|+.|+|++|+|++.+. . ..+|+.|++++|.|.. +|.. ..+|+.|+|++|+|+.++. ..
T Consensus 340 --lp~~Lq~LdLS~N~Ls~LP~-l-------p~~L~~L~Ls~N~L~~-LP~l---~~~L~~LdLs~N~Lt~LP~----l~ 401 (788)
T PRK15387 340 --LPSGLQELSVSDNQLASLPT-L-------PSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTSLPV----LP 401 (788)
T ss_pred --cccccceEecCCCccCCCCC-C-------Ccccceehhhcccccc-Cccc---ccccceEEecCCcccCCCC----cc
Confidence 34567777777777664221 1 1346666666666663 3322 2356666666666655442 12
Q ss_pred cCCCeEecCCCcCcCCCchhhhcCCCCCEEeCCCCcCCCCCCcc-CCCCccEEEccCCcCcccCC
Q 003504 294 LGLEHLNLSRTSLIGDIPSEILQLSSLHTLDLSMNHLTGQIPTV-SAKNLGIIDMSHNNLSGEIP 357 (815)
Q Consensus 294 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~-~~~~L~~L~ls~N~l~~~~p 357 (815)
.+|+.|++++|.|++ +|..+ .+|+.|++++|+|+..+... .+.+|+.|+|++|+|++.+|
T Consensus 402 s~L~~LdLS~N~Lss-IP~l~---~~L~~L~Ls~NqLt~LP~sl~~L~~L~~LdLs~N~Ls~~~~ 462 (788)
T PRK15387 402 SELKELMVSGNRLTS-LPMLP---SGLLSLSVYRNQLTRLPESLIHLSSETTVNLEGNPLSERTL 462 (788)
T ss_pred cCCCEEEccCCcCCC-CCcch---hhhhhhhhccCcccccChHHhhccCCCeEECCCCCCCchHH
Confidence 455566666666553 34321 24455555555555322211 34555555555555554444
No 411
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.93 E-value=4.4e-25 Score=228.10 Aligned_cols=133 Identities=21% Similarity=0.275 Sum_probs=110.9
Q ss_pred hcCCCCCCeecccCCeeeEEEE-cCCCcEEEEEEeecCCcccHHHHHHHHHHhcCCC-----C---CCceeeeeEEEe--
Q 003504 507 TSNFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIK-----H---PNLVPLTGYCIA-- 575 (815)
Q Consensus 507 ~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-----H---~niv~l~g~~~~-- 575 (815)
..+|.+.++||-|.|++||+|. ..+.+.||+|+.+. .+.-.+....||++|++++ | ..||+|+++|..
T Consensus 77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKS-AqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsG 155 (590)
T KOG1290|consen 77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKS-AQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSG 155 (590)
T ss_pred CceEEEEEeccccccceeEEEeeccCCeEEEEEEEeh-hhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecC
Confidence 3578889999999999999999 56678999999865 3444556778999999984 3 359999999975
Q ss_pred --CCeeEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcC
Q 003504 576 --GDQRIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHG 653 (815)
Q Consensus 576 --~~~~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~ 653 (815)
+...++|+|++-. +|..+|... ..+.+......+|+.||+.||.|||..
T Consensus 156 pNG~HVCMVfEvLGd-nLLklI~~s----------------------------~YrGlpl~~VK~I~~qvL~GLdYLH~e 206 (590)
T KOG1290|consen 156 PNGQHVCMVFEVLGD-NLLKLIKYS----------------------------NYRGLPLSCVKEICRQVLTGLDYLHRE 206 (590)
T ss_pred CCCcEEEEEehhhhh-HHHHHHHHh----------------------------CCCCCcHHHHHHHHHHHHHHHHHHHHh
Confidence 4578999999855 899998763 355688889999999999999999984
Q ss_pred CCCCeeeccCCCCceEEc
Q 003504 654 CSPPIIHRDIKASSVYLD 671 (815)
Q Consensus 654 ~~~~ivHrDlk~~NIll~ 671 (815)
-+|||-||||+|||+.
T Consensus 207 --cgIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 207 --CGIIHTDLKPENVLLC 222 (590)
T ss_pred --cCccccCCCcceeeee
Confidence 4899999999999984
No 412
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.93 E-value=5.9e-28 Score=266.78 Aligned_cols=343 Identities=29% Similarity=0.316 Sum_probs=253.4
Q ss_pred eEEEEecCCCCCccCCCcccccCCCCCCEEECcCCCCCCCCcccCCCCCCCEEEccCCcCCccCCccccCCCCCcEEEcc
Q 003504 29 HVTDFLASNSGLSGSVPDTTIGKLSKLQSLDLSENNITALPSDLWSLGSLKSLNLSYNRISGSLPSNIGNFGLLEVFDLS 108 (815)
Q Consensus 29 ~~~~l~~~~~~~~g~~~~~~~~~l~~L~~L~Ls~n~l~~lp~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls 108 (815)
+++.++++.|-+. ..|-+.+.+--+|+.|||++|++...|..+..+.+|+.|+++.|.|. ..|.+.+++.+|++|.|.
T Consensus 22 ~~~~ln~~~N~~l-~~pl~~~~~~v~L~~l~lsnn~~~~fp~~it~l~~L~~ln~s~n~i~-~vp~s~~~~~~l~~lnL~ 99 (1081)
T KOG0618|consen 22 ALQILNLRRNSLL-SRPLEFVEKRVKLKSLDLSNNQISSFPIQITLLSHLRQLNLSRNYIR-SVPSSCSNMRNLQYLNLK 99 (1081)
T ss_pred HHHhhhccccccc-cCchHHhhheeeeEEeeccccccccCCchhhhHHHHhhcccchhhHh-hCchhhhhhhcchhheec
Confidence 4667777777665 44555566666799999999999999999999999999999999998 788999999999999999
Q ss_pred CCcCCCCChhhhcCCcCCCEEEcCCCcccccCCcccccccccceeeccCC-------------------cCCCCCCchhh
Q 003504 109 NNNFSGEIPAAISSLVSLRVLKLDGNMFQWSIPPGLLNCQSLVTVDLSMN-------------------QLNGSLPDGFG 169 (815)
Q Consensus 109 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N-------------------~l~~~lp~~~~ 169 (815)
+|.+. ..|..+..+.+|+.|+++.|++. .+|..+..++.+..+..++| .+.+.++.++.
T Consensus 100 ~n~l~-~lP~~~~~lknl~~LdlS~N~f~-~~Pl~i~~lt~~~~~~~s~N~~~~~lg~~~ik~~~l~~n~l~~~~~~~i~ 177 (1081)
T KOG0618|consen 100 NNRLQ-SLPASISELKNLQYLDLSFNHFG-PIPLVIEVLTAEEELAASNNEKIQRLGQTSIKKLDLRLNVLGGSFLIDIY 177 (1081)
T ss_pred cchhh-cCchhHHhhhcccccccchhccC-CCchhHHhhhHHHHHhhhcchhhhhhccccchhhhhhhhhcccchhcchh
Confidence 99999 88999999999999999999998 57766666666665555555 11111111110
Q ss_pred ------------------ccCCCCCEEEcCCCcccC--------------------CCCCCCCCCCCCeEeccCCcCCCc
Q 003504 170 ------------------AAFPKLKSLNLAGNEIKG--------------------RDTHFAGLKSITNLNISGNLFQGS 211 (815)
Q Consensus 170 ------------------~~l~~L~~L~L~~N~l~~--------------------~~~~~~~l~~L~~L~Ls~N~l~~~ 211 (815)
..+.+|+.|....|++.. .... ..-.+|++++++.|+++.+
T Consensus 178 ~l~~~ldLr~N~~~~~dls~~~~l~~l~c~rn~ls~l~~~g~~l~~L~a~~n~l~~~~~~-p~p~nl~~~dis~n~l~~l 256 (1081)
T KOG0618|consen 178 NLTHQLDLRYNEMEVLDLSNLANLEVLHCERNQLSELEISGPSLTALYADHNPLTTLDVH-PVPLNLQYLDISHNNLSNL 256 (1081)
T ss_pred hhheeeecccchhhhhhhhhccchhhhhhhhcccceEEecCcchheeeeccCcceeeccc-cccccceeeecchhhhhcc
Confidence 111222222222222221 1000 1124677888888888888
Q ss_pred chhhh-hcccceeeeccccccCcccccc------------------cccccCCccceEEEcCCCccCcchhhcccc----
Q 003504 212 VMGVF-LESLEVIDLRSNQFQGHISQVQ------------------FNSSYNWSRLVYVDLSENQLSGEIFHNFSQ---- 268 (815)
Q Consensus 212 ~~~~~-l~~L~~L~L~~N~l~~~~~~~~------------------~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~---- 268 (815)
|.... +.+|+.|+..+|+++..+..+. .....+++.|++|+|..|+|.......+..
T Consensus 257 p~wi~~~~nle~l~~n~N~l~~lp~ri~~~~~L~~l~~~~nel~yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~ 336 (1081)
T KOG0618|consen 257 PEWIGACANLEALNANHNRLVALPLRISRITSLVSLSAAYNELEYIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNAS 336 (1081)
T ss_pred hHHHHhcccceEecccchhHHhhHHHHhhhhhHHHHHhhhhhhhhCCCcccccceeeeeeehhccccccchHHHhhhhHH
Confidence 74433 7778888888887753222110 112234788999999999987543322111
Q ss_pred ---------------------CCCCCEEEecCCcCcCCCccccccccCCCeEecCCCcCcCCCchhhhcCCCCCEEeCCC
Q 003504 269 ---------------------AQNLKHLSLAYNRFTRQEFPQIGTLLGLEHLNLSRTSLIGDIPSEILQLSSLHTLDLSM 327 (815)
Q Consensus 269 ---------------------l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~ 327 (815)
++.|+.|+|.+|.+++.-.+.+.+.++|+.|+|++|+|.......+.++..|++|+||+
T Consensus 337 l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSG 416 (1081)
T KOG0618|consen 337 LNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSG 416 (1081)
T ss_pred HHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhccc
Confidence 34588899999999888888999999999999999999855556788899999999999
Q ss_pred CcCCCCCCcc-CCCCccEEEccCCcCcccCChHHhhcCCCCceeeccCCCCcc
Q 003504 328 NHLTGQIPTV-SAKNLGIIDMSHNNLSGEIPASLLEKLPQMERFNFSYNNLTL 379 (815)
Q Consensus 328 N~l~~~~~~~-~~~~L~~L~ls~N~l~~~~p~~~~~~l~~l~~l~l~~N~l~~ 379 (815)
|+|+..+... .+..|++|...+|+|. .+| -+..+++|+.+|++.|+++.
T Consensus 417 NkL~~Lp~tva~~~~L~tL~ahsN~l~-~fP--e~~~l~qL~~lDlS~N~L~~ 466 (1081)
T KOG0618|consen 417 NKLTTLPDTVANLGRLHTLRAHSNQLL-SFP--ELAQLPQLKVLDLSCNNLSE 466 (1081)
T ss_pred chhhhhhHHHHhhhhhHHHhhcCCcee-ech--hhhhcCcceEEecccchhhh
Confidence 9999755433 7789999999999998 677 46789999999999999874
No 413
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.93 E-value=2.4e-26 Score=220.03 Aligned_cols=250 Identities=27% Similarity=0.389 Sum_probs=192.6
Q ss_pred CCeecccCCeeeEEEEcCCCcEEEEEEeecC--CcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeCCCCC
Q 003504 513 GTLLAEGKFGPVYRGFLPGGIHVAVKVLVHG--STLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGN 590 (815)
Q Consensus 513 ~~~ig~G~~g~Vy~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gs 590 (815)
..+|.....|+.|+|++++ ..+++|++.-. ......+|..|.-.++-+.||||++++|.|.......++..||+.|+
T Consensus 195 ~tkl~e~hsgelwrgrwqg-ndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gs 273 (448)
T KOG0195|consen 195 ITKLAESHSGELWRGRWQG-NDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGS 273 (448)
T ss_pred hhhhccCCCcccccccccC-cchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchH
Confidence 3468888999999999984 45777877532 23334689999999999999999999999999999999999999999
Q ss_pred hhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCceEE
Q 003504 591 LQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYL 670 (815)
Q Consensus 591 L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NIll 670 (815)
|+..||+. .+...+-.+..++|.++|+|++|||+- ++-|----|.+..|++
T Consensus 274 lynvlhe~----------------------------t~vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmi 324 (448)
T KOG0195|consen 274 LYNVLHEQ----------------------------TSVVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMI 324 (448)
T ss_pred HHHHHhcC----------------------------ccEEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEe
Confidence 99999973 355677788899999999999999953 2333344688999999
Q ss_pred cCCCCeeecccccceecCCCCccccccccccccCCcccCCCCCC-CCCcCcchhHHHHHHHHHhCCCCCCCCCCcccccc
Q 003504 671 DMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDF-PTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGN 749 (815)
Q Consensus 671 ~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~ 749 (815)
|++.+++|+- +-+++ ........-.+.||+||.++..... --..+|+|||++++||+.|+..||.+-.+-+..-+
T Consensus 325 dedltarism-ad~kf---sfqe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmk 400 (448)
T KOG0195|consen 325 DEDLTARISM-ADTKF---SFQEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMK 400 (448)
T ss_pred cchhhhheec-cccee---eeeccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhh
Confidence 9999998862 21221 1122223346789999998765521 24578999999999999999999987555443311
Q ss_pred HHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhhh
Q 003504 750 LVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDIE 812 (815)
Q Consensus 750 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~ 812 (815)
+. -++++..-|+.....+.++|.-|...||.+||.+..|+-.|+++.
T Consensus 401 ia----------------leglrv~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 401 IA----------------LEGLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred hh----------------hccccccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 11 123344446667788999999999999999999999999998864
No 414
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.92 E-value=1.3e-24 Score=249.13 Aligned_cols=267 Identities=26% Similarity=0.296 Sum_probs=217.3
Q ss_pred EecCCCCeEEEEecCCCCCccCCCcccccCCCCCCEEECcCCCCCCCCcccCCCCCCCEEEccCCcCCccCCccccCCCC
Q 003504 22 VCDSNKQHVTDFLASNSGLSGSVPDTTIGKLSKLQSLDLSENNITALPSDLWSLGSLKSLNLSYNRISGSLPSNIGNFGL 101 (815)
Q Consensus 22 ~C~~~~~~~~~l~~~~~~~~g~~~~~~~~~l~~L~~L~Ls~n~l~~lp~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~ 101 (815)
.|..++ -..|++++++++ .+|+. +. ++|+.|+|++|+|+.+|.. +++|++|+|++|+|+. +|.. .++
T Consensus 197 ~Cl~~~--~~~LdLs~~~Lt-sLP~~-l~--~~L~~L~L~~N~Lt~LP~l---p~~Lk~LdLs~N~Lts-LP~l---p~s 263 (788)
T PRK15387 197 ACLNNG--NAVLNVGESGLT-TLPDC-LP--AHITTLVIPDNNLTSLPAL---PPELRTLEVSGNQLTS-LPVL---PPG 263 (788)
T ss_pred HHhcCC--CcEEEcCCCCCC-cCCcc-hh--cCCCEEEccCCcCCCCCCC---CCCCcEEEecCCccCc-ccCc---ccc
Confidence 465443 345789999998 68874 43 4899999999999999963 5899999999999994 5643 468
Q ss_pred CcEEEccCCcCCCCChhhhcCCcCCCEEEcCCCcccccCCcccccccccceeeccCCcCCCCCCchhhccCCCCCEEEcC
Q 003504 102 LEVFDLSNNNFSGEIPAAISSLVSLRVLKLDGNMFQWSIPPGLLNCQSLVTVDLSMNQLNGSLPDGFGAAFPKLKSLNLA 181 (815)
Q Consensus 102 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~L~ 181 (815)
|+.|+|++|.|+ .+|..+ .+|+.|+|++|+|+. +|.. +++|+.|+|++|+|+ .+|.. ..+|+.|+++
T Consensus 264 L~~L~Ls~N~L~-~Lp~lp---~~L~~L~Ls~N~Lt~-LP~~---p~~L~~LdLS~N~L~-~Lp~l----p~~L~~L~Ls 330 (788)
T PRK15387 264 LLELSIFSNPLT-HLPALP---SGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLA-SLPAL----PSELCKLWAY 330 (788)
T ss_pred cceeeccCCchh-hhhhch---hhcCEEECcCCcccc-cccc---ccccceeECCCCccc-cCCCC----cccccccccc
Confidence 999999999999 445433 678899999999994 5653 478999999999998 67752 3578999999
Q ss_pred CCcccCCCCCCCCCCCCCeEeccCCcCCCcchhhhhcccceeeeccccccCcccccccccccCCccceEEEcCCCccCcc
Q 003504 182 GNEIKGRDTHFAGLKSITNLNISGNLFQGSVMGVFLESLEVIDLRSNQFQGHISQVQFNSSYNWSRLVYVDLSENQLSGE 261 (815)
Q Consensus 182 ~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 261 (815)
+|.|+.+|.. ..+|+.|+|++|+|+.+|. +..+|+.|++++|+++.. +.. ..+|+.|+|++|.|++
T Consensus 331 ~N~L~~LP~l---p~~Lq~LdLS~N~Ls~LP~--lp~~L~~L~Ls~N~L~~L-P~l-------~~~L~~LdLs~N~Lt~- 396 (788)
T PRK15387 331 NNQLTSLPTL---PSGLQELSVSDNQLASLPT--LPSELYKLWAYNNRLTSL-PAL-------PSGLKELIVSGNRLTS- 396 (788)
T ss_pred cCcccccccc---ccccceEecCCCccCCCCC--CCcccceehhhccccccC-ccc-------ccccceEEecCCcccC-
Confidence 9999987742 2589999999999999875 357899999999998853 322 2579999999999995
Q ss_pred hhhccccCCCCCEEEecCCcCcCCCccccccccCCCeEecCCCcCcCCCchhhhcCCCCCEEeCCCCcCCCCCCc
Q 003504 262 IFHNFSQAQNLKHLSLAYNRFTRQEFPQIGTLLGLEHLNLSRTSLIGDIPSEILQLSSLHTLDLSMNHLTGQIPT 336 (815)
Q Consensus 262 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~ 336 (815)
+|.. .++|+.|+|++|+|+.++. ...+|+.|+|++|.|+ .+|..+..+++|+.|+|++|+|++..+.
T Consensus 397 LP~l---~s~L~~LdLS~N~LssIP~----l~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~ 463 (788)
T PRK15387 397 LPVL---PSELKELMVSGNRLTSLPM----LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQ 463 (788)
T ss_pred CCCc---ccCCCEEEccCCcCCCCCc----chhhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHH
Confidence 4432 3689999999999988763 2357899999999998 7899999999999999999999987654
No 415
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.92 E-value=1.5e-25 Score=229.10 Aligned_cols=261 Identities=24% Similarity=0.328 Sum_probs=193.0
Q ss_pred HHhcCCCCCCeecccCCeeeEEEEcC----CCcEEEEEEeecCCcccHHHHHHHHHHhcCCC-CCCceeeeeEEEeCCee
Q 003504 505 SATSNFDRGTLLAEGKFGPVYRGFLP----GGIHVAVKVLVHGSTLTDQEAARELEYLGRIK-HPNLVPLTGYCIAGDQR 579 (815)
Q Consensus 505 ~~~~~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~ 579 (815)
.....|...++||.|.|++||+|+.. ..+.||+|.+.. ......+..|+++|..+. +.||+++.+++...+..
T Consensus 33 ~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~--ts~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v 110 (418)
T KOG1167|consen 33 FISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYR--TSSPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQV 110 (418)
T ss_pred hhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccc--ccCchHHHHHHHHHHHhccchhhhcchhhhccCCee
Confidence 34467888999999999999999853 467899998855 345667899999999995 99999999999999999
Q ss_pred EEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCee
Q 003504 580 IAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPII 659 (815)
Q Consensus 580 ~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~iv 659 (815)
.+|+||++.-+-.+++.. ++.......+..+.+||+++| ..|||
T Consensus 111 ~ivlp~~~H~~f~~l~~~---------------------------------l~~~~i~~Yl~~ll~Al~~~h---~~GIv 154 (418)
T KOG1167|consen 111 AIVLPYFEHDRFRDLYRS---------------------------------LSLAEIRWYLRNLLKALAHLH---KNGIV 154 (418)
T ss_pred EEEecccCccCHHHHHhc---------------------------------CCHHHHHHHHHHHHHHhhhhh---ccCcc
Confidence 999999999998888864 345667778889999999999 89999
Q ss_pred eccCCCCceEEcCC-CCeeecccccceecCC-------------------CC--------------------------cc
Q 003504 660 HRDIKASSVYLDMN-LEPRLSDFGLAKIFGN-------------------GL--------------------------DE 693 (815)
Q Consensus 660 HrDlk~~NIll~~~-~~~kl~Dfgla~~~~~-------------------~~--------------------------~~ 693 (815)
||||||+|+|.+.. +.-.|.|||+|..... +. ..
T Consensus 155 HRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~ 234 (418)
T KOG1167|consen 155 HRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSER 234 (418)
T ss_pred ccCCCccccccccccCCceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCcccee
Confidence 99999999999854 5679999999972110 00 00
Q ss_pred ccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCccccccHHHHH--------HHH-HhcCC--
Q 003504 694 EIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWV--------RGL-VRNNK-- 762 (815)
Q Consensus 694 ~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~--------~~~-~~~~~-- 762 (815)
...+||+||.|||++..... -++++||||.||+++-+++++.||...... ...+...+ +++ .-.+.
T Consensus 235 anrAGT~GfRaPEvL~k~~~-QttaiDiws~GVI~Lslls~~~PFf~a~dd--~~al~ei~tifG~~~mrk~A~l~g~~~ 311 (418)
T KOG1167|consen 235 ANRAGTPGFRAPEVLFRCPR-QTTAIDIWSAGVILLSLLSRRYPFFKAKDD--ADALAEIATIFGSAEMRKCAALPGRIL 311 (418)
T ss_pred cccCCCCCCCchHHHhhccC-cCCccceeeccceeehhhccccccccCccc--cchHHHHHHHhChHHHHHHhhcCCcee
Confidence 11239999999999876553 588999999999999999999998753221 11111111 000 00000
Q ss_pred C---------------Ccccc-cccc---------CCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 763 G---------------SRAID-PKIR---------DTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 763 ~---------------~~~~~-~~~~---------~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
. .+-++ +.+. ....+..+..++++..+|+..||.+|.++++.++
T Consensus 312 l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALk 380 (418)
T KOG1167|consen 312 LWQKSNIPTIPELRVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALK 380 (418)
T ss_pred eeccccccccHHHHhchhccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhc
Confidence 0 00010 0000 0112233457899999999999999999999976
No 416
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.92 E-value=1.4e-25 Score=269.41 Aligned_cols=193 Identities=18% Similarity=0.185 Sum_probs=138.3
Q ss_pred CCCC-CCceeeeeEEE-------eCCeeEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCccc
Q 003504 560 RIKH-PNLVPLTGYCI-------AGDQRIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLT 631 (815)
Q Consensus 560 ~l~H-~niv~l~g~~~-------~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 631 (815)
.++| +||++++++|. ..+..+.++||+ .++|.++|... ...+
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~-----------------------------~~~~ 77 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNP-----------------------------DRSV 77 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcc-----------------------------cccc
Confidence 3456 68888888872 223556778887 45999999642 3357
Q ss_pred CHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCceEEcC-------------------CCCeeecccccceecCCCC-
Q 003504 632 TWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDM-------------------NLEPRLSDFGLAKIFGNGL- 691 (815)
Q Consensus 632 ~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NIll~~-------------------~~~~kl~Dfgla~~~~~~~- 691 (815)
++..++.++.||++||+||| +.+||||||||+||||+. ++.+|++|||+++......
T Consensus 78 ~~~~~~~i~~qi~~al~~lH---~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~ 154 (793)
T PLN00181 78 DAFECFHVFRQIVEIVNAAH---SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSE 154 (793)
T ss_pred cHHHHHHHHHHHHHHHHHHH---hCCeeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccc
Confidence 88999999999999999999 899999999999999953 4567788888776432100
Q ss_pred ----------------ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCccccccHHHHHH
Q 003504 692 ----------------DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWVR 755 (815)
Q Consensus 692 ----------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~ 755 (815)
......||+.|||||++.+.. ++.++|||||||++|||++|..|+.... . .+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~--~~~~sDVwSlGviL~ELl~~~~~~~~~~------~---~~~ 223 (793)
T PLN00181 155 RRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSS--SNCASDVYRLGVLLFELFCPVSSREEKS------R---TMS 223 (793)
T ss_pred cchhhhhccccCCCcccccccCCCcceEChhhhccCC--CCchhhhhhHHHHHHHHhhCCCchhhHH------H---HHH
Confidence 011235788999999988766 7899999999999999999888764210 0 111
Q ss_pred HHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 756 GLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 756 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
... . ...++.. .........++.+||+++|.+||+|.|+++
T Consensus 224 ~~~-~----~~~~~~~-----~~~~~~~~~~~~~~L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 224 SLR-H----RVLPPQI-----LLNWPKEASFCLWLLHPEPSCRPSMSELLQ 264 (793)
T ss_pred HHH-H----hhcChhh-----hhcCHHHHHHHHHhCCCChhhCcChHHHhh
Confidence 110 0 0111111 112234568888999999999999999975
No 417
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.91 E-value=1.5e-25 Score=232.43 Aligned_cols=201 Identities=21% Similarity=0.234 Sum_probs=166.9
Q ss_pred hcCCCCCCeecccCCeeeEEEEc-CCCcEEEEEEeecCCcccHHHHHHHHHHhcCCC------CCCceeeeeEEEeCCee
Q 003504 507 TSNFDRGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGSTLTDQEAARELEYLGRIK------HPNLVPLTGYCIAGDQR 579 (815)
Q Consensus 507 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~------H~niv~l~g~~~~~~~~ 579 (815)
..+|.+....|+|-|+.|.+|.. ..|..||||+++... .-.+.=.+|+++|.+|. --+.++++-.|......
T Consensus 431 D~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE-~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHL 509 (752)
T KOG0670|consen 431 DSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNE-VMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHL 509 (752)
T ss_pred cceeEEEeccccceeeeeeeccccCCCCeeEEEEeecch-HHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhccee
Confidence 35688888899999999999984 447799999998743 33444568999999994 34789999999999999
Q ss_pred EEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCee
Q 003504 580 IAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPII 659 (815)
Q Consensus 580 ~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~iv 659 (815)
|||||-+.- +|.+.|.+. +....+........+.|+.-||..|- .-+|+
T Consensus 510 ClVFE~Lsl-NLRevLKKy---------------------------G~nvGL~ikaVRsYaqQLflALklLK---~c~vl 558 (752)
T KOG0670|consen 510 CLVFEPLSL-NLREVLKKY---------------------------GRNVGLHIKAVRSYAQQLFLALKLLK---KCGVL 558 (752)
T ss_pred EEEehhhhc-hHHHHHHHh---------------------------CcccceeehHHHHHHHHHHHHHHHHH---hcCee
Confidence 999998765 999999863 23456777888899999999999999 78999
Q ss_pred eccCCCCceEEcCCC-CeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCC
Q 003504 660 HRDIKASSVYLDMNL-EPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPL 738 (815)
Q Consensus 660 HrDlk~~NIll~~~~-~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~ 738 (815)
|.||||+||||++.- .+||||||.|....... -+++.-+..|.|||++.+.. |+...|+||.||+||||+||+--|
T Consensus 559 HaDIKPDNiLVNE~k~iLKLCDfGSA~~~~ene-itPYLVSRFYRaPEIiLG~~--yd~~iD~WSvgctLYElYtGkIlF 635 (752)
T KOG0670|consen 559 HADIKPDNILVNESKNILKLCDFGSASFASENE-ITPYLVSRFYRAPEIILGLP--YDYPIDTWSVGCTLYELYTGKILF 635 (752)
T ss_pred ecccCccceEeccCcceeeeccCcccccccccc-ccHHHHHHhccCcceeecCc--ccCCccceeeceeeEEeeccceec
Confidence 999999999999764 58999999998765433 33344577899999999988 788999999999999999999988
Q ss_pred CCCC
Q 003504 739 GDDY 742 (815)
Q Consensus 739 ~~~~ 742 (815)
.+..
T Consensus 636 pG~T 639 (752)
T KOG0670|consen 636 PGRT 639 (752)
T ss_pred CCCC
Confidence 7743
No 418
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.91 E-value=3.2e-24 Score=209.58 Aligned_cols=159 Identities=22% Similarity=0.293 Sum_probs=119.1
Q ss_pred CcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCceEEcCCCCeeecccccceecCCCCccccccccccccCCcc
Q 003504 628 GLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEF 707 (815)
Q Consensus 628 ~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~ 707 (815)
+..++|..+..|+.|++.||+||| +.+ ||+||+++.++.+|+ ||.++...... ..|++.|||||+
T Consensus 11 ~~~l~~~~~~~i~~qi~~~L~~lH---~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~~----~~g~~~y~aPE~ 75 (176)
T smart00750 11 GRPLNEEEIWAVCLQCLRALRELH---RQA------KSGNILLTWDGLLKL--DGSVAFKTPEQ----SRVDPYFMAPEV 75 (176)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHH---hcC------CcccEeEcCccceee--ccceEeecccc----CCCcccccChHH
Confidence 346899999999999999999999 444 999999999999999 99998765422 258999999999
Q ss_pred cCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHH--HHHH
Q 003504 708 AQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQME--EALK 785 (815)
Q Consensus 708 ~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 785 (815)
+.+.. ++.++|||||||++|||++|+.||..... ....+..+....... ++... ..+..... ++.+
T Consensus 76 ~~~~~--~~~~~DiwSlG~il~elltg~~p~~~~~~--~~~~~~~~~~~~~~~-------~~~~~-~~~~~~~~~~~~~~ 143 (176)
T smart00750 76 IQGQS--YTEKADIYSLGITLYEALDYELPYNEERE--LSAILEILLNGMPAD-------DPRDR-SNLESVSAARSFAD 143 (176)
T ss_pred hcCCC--CcchhhHHHHHHHHHHHHhCCCCccccch--hcHHHHHHHHHhccC-------Ccccc-ccHHHHHhhhhHHH
Confidence 98766 78899999999999999999999964321 111111111111100 01000 11223333 6899
Q ss_pred HHhhccccCCCCCCCHHHHHHHHHhhhh
Q 003504 786 IGYLCTADLPLKRPSMQQIVGLLKDIES 813 (815)
Q Consensus 786 l~~~Cl~~dP~~RPs~~~v~~~L~~i~~ 813 (815)
++.+||..+|++||++.++++.+..+..
T Consensus 144 ~i~~cl~~~p~~Rp~~~~ll~~~~~~~~ 171 (176)
T smart00750 144 FMRVCASRLPQRREAANHYLAHCRALFA 171 (176)
T ss_pred HHHHHHhcccccccCHHHHHHHHHHHHH
Confidence 9999999999999999999999877644
No 419
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.90 E-value=1.6e-25 Score=225.54 Aligned_cols=302 Identities=25% Similarity=0.229 Sum_probs=240.3
Q ss_pred CEEECcCCCCCCCCcccCCCCCCCEEEccCCcCCccCCccccCCCCCcEEEccCCcCCCCChhhhcCCcCCCEEEcCC-C
Q 003504 56 QSLDLSENNITALPSDLWSLGSLKSLNLSYNRISGSLPSNIGNFGLLEVFDLSNNNFSGEIPAAISSLVSLRVLKLDG-N 134 (815)
Q Consensus 56 ~~L~Ls~n~l~~lp~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~-N 134 (815)
...|.++-.++++|.++ .+.-++++|..|.|+.+.|..|+.+++|+.||||+|+|+-+.|++|.++.+|..|.|.+ |
T Consensus 49 ~~VdCr~~GL~eVP~~L--P~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~N 126 (498)
T KOG4237|consen 49 GIVDCRGKGLTEVPANL--PPETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNN 126 (498)
T ss_pred ceEEccCCCcccCcccC--CCcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCC
Confidence 45688888999999877 45788999999999999999999999999999999999999999999999999988877 9
Q ss_pred cccccCCcccccccccceeeccCCcCCCCCCchhhccCCCCCEEEcCCCcccCCCC-CCCCCCCCCeEeccCCcCCC---
Q 003504 135 MFQWSIPPGLLNCQSLVTVDLSMNQLNGSLPDGFGAAFPKLKSLNLAGNEIKGRDT-HFAGLKSITNLNISGNLFQG--- 210 (815)
Q Consensus 135 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~--- 210 (815)
+|+...-+.|.+|.+|+.|.+.-|++. .++...+..+++|..|.|.+|.++.+.. .|..+..++.+.+..|.+-.
T Consensus 127 kI~~l~k~~F~gL~slqrLllNan~i~-Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCn 205 (498)
T KOG4237|consen 127 KITDLPKGAFGGLSSLQRLLLNANHIN-CIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCN 205 (498)
T ss_pred chhhhhhhHhhhHHHHHHHhcChhhhc-chhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccc
Confidence 999877789999999999999999998 8888888999999999999999999875 79999999999999998421
Q ss_pred cchhh---------h--hcccceeeeccccccCccccccccccc-CCccceEEEcCCCccCcc-hhhccccCCCCCEEEe
Q 003504 211 SVMGV---------F--LESLEVIDLRSNQFQGHISQVQFNSSY-NWSRLVYVDLSENQLSGE-IFHNFSQAQNLKHLSL 277 (815)
Q Consensus 211 ~~~~~---------~--l~~L~~L~L~~N~l~~~~~~~~~~~~~-~l~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L~L 277 (815)
++-.+ + ..-..-..+.++++. ++....|. .+..+..-..+.+...+. ....|..+++|+.|+|
T Consensus 206 L~wla~~~a~~~ietsgarc~~p~rl~~~Ri~----q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnl 281 (498)
T KOG4237|consen 206 LPWLADDLAMNPIETSGARCVSPYRLYYKRIN----QEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNL 281 (498)
T ss_pred cchhhhHHhhchhhcccceecchHHHHHHHhc----ccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEecc
Confidence 11110 0 111222333444332 11111111 122232223333333333 3456899999999999
Q ss_pred cCCcCcCCCccccccccCCCeEecCCCcCcCCCchhhhcCCCCCEEeCCCCcCCCCCCcc--CCCCccEEEccCCcCccc
Q 003504 278 AYNRFTRQEFPQIGTLLGLEHLNLSRTSLIGDIPSEILQLSSLHTLDLSMNHLTGQIPTV--SAKNLGIIDMSHNNLSGE 355 (815)
Q Consensus 278 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~--~~~~L~~L~ls~N~l~~~ 355 (815)
++|+|+.+...+|..+..++.|.|..|+|...-...|.++..|++|+|.+|+|+..-|.. .+..|..|+|-.|.+.+.
T Consensus 282 snN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~Cn 361 (498)
T KOG4237|consen 282 SNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCN 361 (498)
T ss_pred CCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCc
Confidence 999999999999999999999999999998777788999999999999999999877765 567899999999999877
Q ss_pred CChHHhhcC
Q 003504 356 IPASLLEKL 364 (815)
Q Consensus 356 ~p~~~~~~l 364 (815)
..-.++..+
T Consensus 362 C~l~wl~~W 370 (498)
T KOG4237|consen 362 CRLAWLGEW 370 (498)
T ss_pred cchHHHHHH
Confidence 665555543
No 420
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.89 E-value=5e-23 Score=219.17 Aligned_cols=164 Identities=23% Similarity=0.257 Sum_probs=127.9
Q ss_pred HhcCCCCCCeecccCCeeeEEEEcC--CCcEEEEEEeecCC-----cccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCe
Q 003504 506 ATSNFDRGTLLAEGKFGPVYRGFLP--GGIHVAVKVLVHGS-----TLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQ 578 (815)
Q Consensus 506 ~~~~~~~~~~ig~G~~g~Vy~~~~~--~~~~vavK~l~~~~-----~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~ 578 (815)
...+|...+.||+|+||+||+|+.. +++.||||++.... ....+.+.+|++++++++|+|+++.+.. ...
T Consensus 16 ~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---~~~ 92 (365)
T PRK09188 16 LSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---TGK 92 (365)
T ss_pred ccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---cCC
Confidence 4567999999999999999999864 57788999875321 1224568999999999999999853322 246
Q ss_pred eEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCe
Q 003504 579 RIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPI 658 (815)
Q Consensus 579 ~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~i 658 (815)
.++||||+++++|.. +.. .. ...++.++++||+||| +.+|
T Consensus 93 ~~LVmE~~~G~~L~~-~~~-----------------------------~~-------~~~~~~~i~~aL~~lH---~~gI 132 (365)
T PRK09188 93 DGLVRGWTEGVPLHL-ARP-----------------------------HG-------DPAWFRSAHRALRDLH---RAGI 132 (365)
T ss_pred cEEEEEccCCCCHHH-hCc-----------------------------cc-------hHHHHHHHHHHHHHHH---HCCC
Confidence 799999999999962 211 00 1357788999999999 8999
Q ss_pred eeccC-CCCceEEcCCCCeeecccccceecCCCCcc---------ccccccccccCCcccCCCC
Q 003504 659 IHRDI-KASSVYLDMNLEPRLSDFGLAKIFGNGLDE---------EIARGSPGYIPPEFAQPDS 712 (815)
Q Consensus 659 vHrDl-k~~NIll~~~~~~kl~Dfgla~~~~~~~~~---------~~~~gt~~y~aPE~~~~~~ 712 (815)
+|||| ||+|||++.++.+||+|||+|+.+...... ....+++.|+|||++....
T Consensus 133 iHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~~ 196 (365)
T PRK09188 133 THNDLAKPQNWLMGPDGEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPRE 196 (365)
T ss_pred eeCCCCCcceEEEcCCCCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCChhh
Confidence 99999 999999999999999999999976543211 2345788899999887654
No 421
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.89 E-value=2.1e-23 Score=241.08 Aligned_cols=245 Identities=23% Similarity=0.353 Sum_probs=128.5
Q ss_pred CCCEEECcCCCCCCCCcccCCCCCCCEEEccCCcCCccCCccccCCCCCcEEEccCCcCCCCChhhhcCCcCCCEEEcCC
Q 003504 54 KLQSLDLSENNITALPSDLWSLGSLKSLNLSYNRISGSLPSNIGNFGLLEVFDLSNNNFSGEIPAAISSLVSLRVLKLDG 133 (815)
Q Consensus 54 ~L~~L~Ls~n~l~~lp~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 133 (815)
+.+.|+|++++++.+|..+. ++|+.|+|++|+|+ .+|..+. .+|++|+|++|+|+. +|..+. .+|+.|+|++
T Consensus 179 ~~~~L~L~~~~LtsLP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lts-LP~~l~--~~L~~L~Ls~ 250 (754)
T PRK15370 179 NKTELRLKILGLTTIPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLTS-IPATLP--DTIQEMELSI 250 (754)
T ss_pred CceEEEeCCCCcCcCCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCcccc-CChhhh--ccccEEECcC
Confidence 35566666666666665442 35666666666666 3343332 356666666666663 344332 2466666666
Q ss_pred CcccccCCcccccccccceeeccCCcCCCCCCchhhccCCCCCEEEcCCCcccCCCCCCCCCCCCCeEeccCCcCCCcch
Q 003504 134 NMFQWSIPPGLLNCQSLVTVDLSMNQLNGSLPDGFGAAFPKLKSLNLAGNEIKGRDTHFAGLKSITNLNISGNLFQGSVM 213 (815)
Q Consensus 134 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 213 (815)
|+|. .+|..+. ++|+.|+|++|+|+ .+|..++ ++|+.|+|++|+|+.+|..+. ++|+.|++++|.++.++.
T Consensus 251 N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~---~sL~~L~Ls~N~Lt~LP~~lp--~sL~~L~Ls~N~Lt~LP~ 321 (754)
T PRK15370 251 NRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP---EELRYLSVYDNSIRTLPAHLP--SGITHLNVQSNSLTALPE 321 (754)
T ss_pred CccC-cCChhHh--CCCCEEECcCCccC-ccccccC---CCCcEEECCCCccccCcccch--hhHHHHHhcCCccccCCc
Confidence 6665 3444442 35666666666665 4555432 355556666665555443322 245555555555554432
Q ss_pred hhhhcccceeeeccccccCcccccccccccCCccceEEEcCCCccCcchhhccccCCCCCEEEecCCcCcCCCccccccc
Q 003504 214 GVFLESLEVIDLRSNQFQGHISQVQFNSSYNWSRLVYVDLSENQLSGEIFHNFSQAQNLKHLSLAYNRFTRQEFPQIGTL 293 (815)
Q Consensus 214 ~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 293 (815)
. +.+ +|+.|++++|.+++ +|..+. ++|+.|+|++|+|+.++. .+ .
T Consensus 322 ~-l~~----------------------------sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~~LP~-~l--p 366 (754)
T PRK15370 322 T-LPP----------------------------GLKTLEAGENALTS-LPASLP--PELQVLDVSKNQITVLPE-TL--P 366 (754)
T ss_pred c-ccc----------------------------cceeccccCCcccc-CChhhc--CcccEEECCCCCCCcCCh-hh--c
Confidence 2 123 45555555555543 333222 456666666666654432 22 2
Q ss_pred cCCCeEecCCCcCcCCCchhhhcCCCCCEEeCCCCcCCCCCCcc-----CCCCccEEEccCCcCc
Q 003504 294 LGLEHLNLSRTSLIGDIPSEILQLSSLHTLDLSMNHLTGQIPTV-----SAKNLGIIDMSHNNLS 353 (815)
Q Consensus 294 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~-----~~~~L~~L~ls~N~l~ 353 (815)
++|+.|+|++|.|+ .+|..+. ..|+.|++++|+|++.+... ..+++..|+|.+|+++
T Consensus 367 ~~L~~LdLs~N~Lt-~LP~~l~--~sL~~LdLs~N~L~~LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 367 PTITTLDVSRNALT-NLPENLP--AALQIMQASRNNLVRLPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred CCcCEEECCCCcCC-CCCHhHH--HHHHHHhhccCCcccCchhHHHHhhcCCCccEEEeeCCCcc
Confidence 45666666666665 3444443 24666666666666432211 2355666777777765
No 422
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.89 E-value=7e-22 Score=244.63 Aligned_cols=314 Identities=22% Similarity=0.247 Sum_probs=193.5
Q ss_pred CCcccccCCCCCCEEECcCCCCC-------CCCcccCCC-CCCCEEEccCCcCCccCCccccCCCCCcEEEccCCcCCCC
Q 003504 44 VPDTTIGKLSKLQSLDLSENNIT-------ALPSDLWSL-GSLKSLNLSYNRISGSLPSNIGNFGLLEVFDLSNNNFSGE 115 (815)
Q Consensus 44 ~~~~~~~~l~~L~~L~Ls~n~l~-------~lp~~~~~l-~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 115 (815)
+...+|..+++|+.|.+..+... .+|.++..+ .+|+.|++.+|.+. .+|..| .+.+|++|+|++|+|. .
T Consensus 549 i~~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~ 625 (1153)
T PLN03210 549 IHENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-K 625 (1153)
T ss_pred ecHHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-c
Confidence 45556777777777777655322 355555554 35777777777776 556666 4577777777777776 4
Q ss_pred ChhhhcCCcCCCEEEcCCCcccccCCcccccccccceeeccCCcCCCCCCchhhccCCCCCEEEcCCC-cccCCCCCCCC
Q 003504 116 IPAAISSLVSLRVLKLDGNMFQWSIPPGLLNCQSLVTVDLSMNQLNGSLPDGFGAAFPKLKSLNLAGN-EIKGRDTHFAG 194 (815)
Q Consensus 116 ~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~L~~N-~l~~~~~~~~~ 194 (815)
++..+..+++|+.|+|++|.....+|+ +..+++|++|+|++|.....+|..+ ..+++|+.|++++| .++.+|..+ +
T Consensus 626 L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si-~~L~~L~~L~L~~c~~L~~Lp~~i-~ 702 (1153)
T PLN03210 626 LWDGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSI-QYLNKLEDLDMSRCENLEILPTGI-N 702 (1153)
T ss_pred cccccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhh-hccCCCCEEeCCCCCCcCccCCcC-C
Confidence 566667777777777776653334553 6667777777777765444677665 44677777777775 455565544 6
Q ss_pred CCCCCeEeccCCcCCCcchhhhhcccceeeeccccccCcccccccccccCCccceEEEcCCCccC-------cchhhccc
Q 003504 195 LKSITNLNISGNLFQGSVMGVFLESLEVIDLRSNQFQGHISQVQFNSSYNWSRLVYVDLSENQLS-------GEIFHNFS 267 (815)
Q Consensus 195 l~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-------~~~~~~~~ 267 (815)
+++|+.|+|++|......+ ....+|+.|+|++|.+...+.. ..+++|++|++.++... ...+..+.
T Consensus 703 l~sL~~L~Lsgc~~L~~~p-~~~~nL~~L~L~~n~i~~lP~~------~~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~ 775 (1153)
T PLN03210 703 LKSLYRLNLSGCSRLKSFP-DISTNISWLDLDETAIEEFPSN------LRLENLDELILCEMKSEKLWERVQPLTPLMTM 775 (1153)
T ss_pred CCCCCEEeCCCCCCccccc-cccCCcCeeecCCCcccccccc------ccccccccccccccchhhccccccccchhhhh
Confidence 7777777777764322111 1245677777777776532221 23556666666653321 11112223
Q ss_pred cCCCCCEEEecCCcCcCCCccccccccCCCeEecCCCcCcCCCchhhhcCCCCCEEeCCCCcCCCCCCccCCCCccEEEc
Q 003504 268 QAQNLKHLSLAYNRFTRQEFPQIGTLLGLEHLNLSRTSLIGDIPSEILQLSSLHTLDLSMNHLTGQIPTVSAKNLGIIDM 347 (815)
Q Consensus 268 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~L~~L~l 347 (815)
..++|+.|+|++|......+..++++++|+.|+|++|...+.+|..+ .+++|+.|+|++|.....+|.. ..+|+.|+|
T Consensus 776 ~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~-~~nL~~L~L 853 (1153)
T PLN03210 776 LSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI-STNISDLNL 853 (1153)
T ss_pred ccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc-ccccCEeEC
Confidence 34567777777775533334567777777777777765555566554 5677777777776554444432 356777777
Q ss_pred cCCcCcccCChHHhhcCCCCceeeccC
Q 003504 348 SHNNLSGEIPASLLEKLPQMERFNFSY 374 (815)
Q Consensus 348 s~N~l~~~~p~~~~~~l~~l~~l~l~~ 374 (815)
++|.++ .+|. .+..+++|+.|++++
T Consensus 854 s~n~i~-~iP~-si~~l~~L~~L~L~~ 878 (1153)
T PLN03210 854 SRTGIE-EVPW-WIEKFSNLSFLDMNG 878 (1153)
T ss_pred CCCCCc-cChH-HHhcCCCCCEEECCC
Confidence 777776 5664 356677777777776
No 423
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.89 E-value=8.1e-22 Score=244.05 Aligned_cols=318 Identities=22% Similarity=0.263 Sum_probs=251.1
Q ss_pred CCCcccccCC-CCCCEEECcCCCCCCCCcccCCCCCCCEEEccCCcCCccCCccccCCCCCcEEEccCCcCCCCChhhhc
Q 003504 43 SVPDTTIGKL-SKLQSLDLSENNITALPSDLWSLGSLKSLNLSYNRISGSLPSNIGNFGLLEVFDLSNNNFSGEIPAAIS 121 (815)
Q Consensus 43 ~~~~~~~~~l-~~L~~L~Ls~n~l~~lp~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 121 (815)
.+|. .|..+ .+|+.|++.+|.++.+|..+ .+.+|++|+|++|+|. .++..+..+++|+.|+|++|.....+| .++
T Consensus 579 ~lp~-~~~~lp~~Lr~L~~~~~~l~~lP~~f-~~~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip-~ls 654 (1153)
T PLN03210 579 HLPE-GFDYLPPKLRLLRWDKYPLRCMPSNF-RPENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIP-DLS 654 (1153)
T ss_pred ecCc-chhhcCcccEEEEecCCCCCCCCCcC-CccCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCC-ccc
Confidence 4555 35555 47999999999999999775 6799999999999998 678889999999999999886544666 488
Q ss_pred CCcCCCEEEcCCCcccccCCcccccccccceeeccCCcCCCCCCchhhccCCCCCEEEcCCCcc-cCCCCCCCCCCCCCe
Q 003504 122 SLVSLRVLKLDGNMFQWSIPPGLLNCQSLVTVDLSMNQLNGSLPDGFGAAFPKLKSLNLAGNEI-KGRDTHFAGLKSITN 200 (815)
Q Consensus 122 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~L~~N~l-~~~~~~~~~l~~L~~ 200 (815)
.+++|++|+|++|.....+|..+.++++|+.|++++|.-.+.+|..+ .+++|+.|+|++|.. ..+|. ...+|++
T Consensus 655 ~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i--~l~sL~~L~Lsgc~~L~~~p~---~~~nL~~ 729 (1153)
T PLN03210 655 MATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI--NLKSLYRLNLSGCSRLKSFPD---ISTNISW 729 (1153)
T ss_pred cCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC--CCCCCCEEeCCCCCCcccccc---ccCCcCe
Confidence 99999999999987666899999999999999999975445888865 589999999999854 33432 2468999
Q ss_pred EeccCCcCCCcchhhhhcccceeeeccccccC---cccccccccccCCccceEEEcCCCccCcchhhccccCCCCCEEEe
Q 003504 201 LNISGNLFQGSVMGVFLESLEVIDLRSNQFQG---HISQVQFNSSYNWSRLVYVDLSENQLSGEIFHNFSQAQNLKHLSL 277 (815)
Q Consensus 201 L~Ls~N~l~~~~~~~~l~~L~~L~L~~N~l~~---~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 277 (815)
|+|++|.+..+|....+++|+.|++.++.... .+..+....+...++|+.|+|++|...+.+|..+.++++|+.|+|
T Consensus 730 L~L~~n~i~~lP~~~~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~L 809 (1153)
T PLN03210 730 LDLDETAIEEFPSNLRLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEI 809 (1153)
T ss_pred eecCCCccccccccccccccccccccccchhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEEC
Confidence 99999999998876668899999988754221 111111111223478999999999888889999999999999999
Q ss_pred cCCc-CcCCCccccccccCCCeEecCCCcCcCCCchhhhcCCCCCEEeCCCCcCCCCCCcc-CCCCccEEEccC-CcCcc
Q 003504 278 AYNR-FTRQEFPQIGTLLGLEHLNLSRTSLIGDIPSEILQLSSLHTLDLSMNHLTGQIPTV-SAKNLGIIDMSH-NNLSG 354 (815)
Q Consensus 278 ~~N~-l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~-~~~~L~~L~ls~-N~l~~ 354 (815)
++|. ++.++ ..+ .+++|+.|+|++|.....+|.. ..+|+.|+|++|.++..+... .+++|+.|+|++ |+|.
T Consensus 810 s~C~~L~~LP-~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~Ls~n~i~~iP~si~~l~~L~~L~L~~C~~L~- 883 (1153)
T PLN03210 810 ENCINLETLP-TGI-NLESLESLDLSGCSRLRTFPDI---STNISDLNLSRTGIEEVPWWIEKFSNLSFLDMNGCNNLQ- 883 (1153)
T ss_pred CCCCCcCeeC-CCC-CccccCEEECCCCCcccccccc---ccccCEeECCCCCCccChHHHhcCCCCCEEECCCCCCcC-
Confidence 9975 56554 333 7899999999998776666643 468999999999998654333 789999999998 6666
Q ss_pred cCChHHhhcCCCCceeeccCCC
Q 003504 355 EIPASLLEKLPQMERFNFSYNN 376 (815)
Q Consensus 355 ~~p~~~~~~l~~l~~l~l~~N~ 376 (815)
.+|.. ...++.|+.++++++.
T Consensus 884 ~l~~~-~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 884 RVSLN-ISKLKHLETVDFSDCG 904 (1153)
T ss_pred ccCcc-cccccCCCeeecCCCc
Confidence 56643 5678889999887763
No 424
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.88 E-value=8.5e-23 Score=236.09 Aligned_cols=253 Identities=21% Similarity=0.332 Sum_probs=182.1
Q ss_pred eEecCCCCeEEEEecCCCCCccCCCcccccCCCCCCEEECcCCCCCCCCcccCCCCCCCEEEccCCcCCccCCccccCCC
Q 003504 21 VVCDSNKQHVTDFLASNSGLSGSVPDTTIGKLSKLQSLDLSENNITALPSDLWSLGSLKSLNLSYNRISGSLPSNIGNFG 100 (815)
Q Consensus 21 v~C~~~~~~~~~l~~~~~~~~g~~~~~~~~~l~~L~~L~Ls~n~l~~lp~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~ 100 (815)
..|..+ ..+.+++++++++ .+|.. + .++|+.|+|++|+|+.+|..++ ++|++|+|++|+|+ .+|..+. .
T Consensus 173 ~~Cl~~--~~~~L~L~~~~Lt-sLP~~-I--p~~L~~L~Ls~N~LtsLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~ 241 (754)
T PRK15370 173 RDCLKN--NKTELRLKILGLT-TIPAC-I--PEQITTLILDNNELKSLPENLQ--GNIKTLYANSNQLT-SIPATLP--D 241 (754)
T ss_pred Hhhccc--CceEEEeCCCCcC-cCCcc-c--ccCCcEEEecCCCCCcCChhhc--cCCCEEECCCCccc-cCChhhh--c
Confidence 456543 4678999999988 57753 3 3589999999999999998775 59999999999999 5676554 4
Q ss_pred CCcEEEccCCcCCCCChhhhcCCcCCCEEEcCCCcccccCCcccccccccceeeccCCcCCCCCCchhhccCCCCCEEEc
Q 003504 101 LLEVFDLSNNNFSGEIPAAISSLVSLRVLKLDGNMFQWSIPPGLLNCQSLVTVDLSMNQLNGSLPDGFGAAFPKLKSLNL 180 (815)
Q Consensus 101 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~L 180 (815)
+|+.|+|++|+|+ .+|..+. .+|+.|+|++|+|+ .+|+.+. ++|+.|+|++|+|+ .+|..+. ++|+.|+|
T Consensus 242 ~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt-~LP~~lp---~sL~~L~L 311 (754)
T PRK15370 242 TIQEMELSINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIR-TLPAHLP---SGITHLNV 311 (754)
T ss_pred cccEEECcCCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECCCCccc-cCcccch---hhHHHHHh
Confidence 7999999999999 5676664 58999999999999 5777664 58999999999998 7887653 57999999
Q ss_pred CCCcccCCCCCCCCCCCCCeEeccCCcCCCcchhhhhcccceeeeccccccCcccccccccccCCccceEEEcCCCccCc
Q 003504 181 AGNEIKGRDTHFAGLKSITNLNISGNLFQGSVMGVFLESLEVIDLRSNQFQGHISQVQFNSSYNWSRLVYVDLSENQLSG 260 (815)
Q Consensus 181 ~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~ 260 (815)
++|.++.+|..+. ++|+.|++++|.++.++.. +.++|+.|+|++|+++..+..+ .++|+.|+|++|.|+.
T Consensus 312 s~N~Lt~LP~~l~--~sL~~L~Ls~N~Lt~LP~~-l~~sL~~L~Ls~N~L~~LP~~l-------p~~L~~LdLs~N~Lt~ 381 (754)
T PRK15370 312 QSNSLTALPETLP--PGLKTLEAGENALTSLPAS-LPPELQVLDVSKNQITVLPETL-------PPTITTLDVSRNALTN 381 (754)
T ss_pred cCCccccCCcccc--ccceeccccCCccccCChh-hcCcccEEECCCCCCCcCChhh-------cCCcCEEECCCCcCCC
Confidence 9999998876543 6899999999999987653 3467888888888776322111 1356666666666653
Q ss_pred chhhccccCCCCCEEEecCCcCcCCCcc---ccccccCCCeEecCCCcCc
Q 003504 261 EIFHNFSQAQNLKHLSLAYNRFTRQEFP---QIGTLLGLEHLNLSRTSLI 307 (815)
Q Consensus 261 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~---~~~~l~~L~~L~Ls~N~l~ 307 (815)
+|..+. ..|+.|++++|+++.++.. .+..++++..|+|.+|+++
T Consensus 382 -LP~~l~--~sL~~LdLs~N~L~~LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 382 -LPENLP--AALQIMQASRNNLVRLPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred -CCHhHH--HHHHHHhhccCCcccCchhHHHHhhcCCCccEEEeeCCCcc
Confidence 333322 2455556666655544311 1122344445555555443
No 425
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.87 E-value=6.3e-22 Score=213.82 Aligned_cols=217 Identities=26% Similarity=0.440 Sum_probs=168.5
Q ss_pred hcCCCCCCceeeeeEEEeCCeeEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHH
Q 003504 558 LGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRH 637 (815)
Q Consensus 558 l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (815)
|+.+.|.|+.+++|.+.++...+.|.+||..|+|.+.+.. ....++|.++.
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~-----------------------------~~~~~d~~F~~ 51 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN-----------------------------EDIKLDYFFIL 51 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhc-----------------------------cccCccHHHHH
Confidence 4578999999999999999999999999999999999974 25578999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCeeeccCCCCceEEcCCCCeeecccccceecCCC---CccccccccccccCCcccCCCC--
Q 003504 638 KIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNG---LDEEIARGSPGYIPPEFAQPDS-- 712 (815)
Q Consensus 638 ~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~---~~~~~~~gt~~y~aPE~~~~~~-- 712 (815)
.+..+++.||+|+|+ ++-..|+.++++|+++|....+||+|||+....... .......-..-|.|||.+....
T Consensus 52 s~~rdi~~Gl~ylh~--s~i~~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~ 129 (484)
T KOG1023|consen 52 SFIRDISKGLAYLHN--SPIGYHGALKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQ 129 (484)
T ss_pred HHHHHHHHHHHHHhc--CcceeeeeeccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccc
Confidence 999999999999994 333399999999999999999999999998776421 1111112344699999988752
Q ss_pred CC---CCCcCcchhHHHHHHHHHhCCCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhh
Q 003504 713 DF---PTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYL 789 (815)
Q Consensus 713 ~~---~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 789 (815)
.. .+.+.||||||++++|+++.+.||+.....+....+..+++. .....+.|.+.... +...++..++..
T Consensus 130 ~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~-----~~~~~~rP~i~~~~--e~~~~l~~l~~~ 202 (484)
T KOG1023|consen 130 SLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKK-----GGSNPFRPSIELLN--ELPPELLLLVAR 202 (484)
T ss_pred cccccccccCCeehHHHHHHHHHhccCccccccccCChHHHHHHHHh-----cCCCCcCcchhhhh--hcchHHHHHHHH
Confidence 11 367899999999999999999999875444333334433322 23334444444221 445579999999
Q ss_pred ccccCCCCCCCHHHHHHHHHhhh
Q 003504 790 CTADLPLKRPSMQQIVGLLKDIE 812 (815)
Q Consensus 790 Cl~~dP~~RPs~~~v~~~L~~i~ 812 (815)
||..+|++||++++|...++.+.
T Consensus 203 cw~e~P~~rPs~~~i~~~~~~~~ 225 (484)
T KOG1023|consen 203 CWEEIPEKRPSIEQIRSKLLTIN 225 (484)
T ss_pred hcccChhhCccHHHHHhhhhhhc
Confidence 99999999999999998887664
No 426
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.85 E-value=1.7e-20 Score=201.07 Aligned_cols=257 Identities=21% Similarity=0.197 Sum_probs=188.9
Q ss_pred CCCCCCeecccCCeeeEEEEcCCC--cEEEEEEeecCCcccHHHHHHHHHHhcCCCC----CCceeeeeEE-EeCCeeEE
Q 003504 509 NFDRGTLLAEGKFGPVYRGFLPGG--IHVAVKVLVHGSTLTDQEAARELEYLGRIKH----PNLVPLTGYC-IAGDQRIA 581 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~~~~--~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H----~niv~l~g~~-~~~~~~~l 581 (815)
+|.+.+.||+|+||.||.|..... ..+|+|.-..........+..|+.++..+.+ +++..+++.. ......++
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 788999999999999999996543 5789998765433333367888888888863 5788888887 46678899
Q ss_pred EEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeec
Q 003504 582 IYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHR 661 (815)
Q Consensus 582 v~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHr 661 (815)
||+.+ +-+|.++.... ....++-.+.++|+.|+..+|++|| +.+++||
T Consensus 99 VM~l~-G~sL~dl~~~~----------------------------~~~~fs~~T~l~ia~q~l~~l~~lH---~~G~iHR 146 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRN----------------------------PPGRFSRKTVLRIAIQNLNALEDLH---SKGFIHR 146 (322)
T ss_pred EEecc-CccHHHHHHhC----------------------------CCCCcCHhHHHHHHHHHHHHHHHHH---hcCcccC
Confidence 99876 55999977542 1346778889999999999999999 8999999
Q ss_pred cCCCCceEEcCC-----CCeeecccccce--ecCCCC--------c-cccccccccccCCcccCCCCCCCCCcCcchhHH
Q 003504 662 DIKASSVYLDMN-----LEPRLSDFGLAK--IFGNGL--------D-EEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYG 725 (815)
Q Consensus 662 Dlk~~NIll~~~-----~~~kl~Dfgla~--~~~~~~--------~-~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~G 725 (815)
||||.|++++.. ..+.|.|||+++ .+.... . .....||..|+++....+.. .+.+.|+||++
T Consensus 147 DiKp~N~~~g~~~~~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e--~~r~DDles~~ 224 (322)
T KOG1164|consen 147 DIKPENFVVGQSSRSEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIE--QGRRDDLESLF 224 (322)
T ss_pred CcCHHHeeecCCCCcccceEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCc--cCCchhhhhHH
Confidence 999999999865 358999999998 321111 1 22345999999999888777 68899999999
Q ss_pred HHHHHHHhCCCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHH
Q 003504 726 VVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIV 805 (815)
Q Consensus 726 vvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~ 805 (815)
.++.|+..|..||...........+. ....... ... .....+.++.+++..+-..+..++|....+.
T Consensus 225 Y~l~el~~g~LPW~~~~~~~~~~~~~----~~~~~~~----~~~-----~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~ 291 (322)
T KOG1164|consen 225 YMLLELLKGSLPWEALEMTDLKSKFE----KDPRKLL----TDR-----FGDLKPEEFAKILEYIDSLDYEDKPDYEKLA 291 (322)
T ss_pred HHHHHHhcCCCCCccccccchHHHHH----HHhhhhc----ccc-----ccCCChHHHHHHHHHhhccCCcCCCCHHHHH
Confidence 99999999999996533221111111 1111111 010 1222344566666666668999999999999
Q ss_pred HHHHhhh
Q 003504 806 GLLKDIE 812 (815)
Q Consensus 806 ~~L~~i~ 812 (815)
..+.+..
T Consensus 292 ~~l~~~~ 298 (322)
T KOG1164|consen 292 ELLKDVF 298 (322)
T ss_pred HHHHHHH
Confidence 8887653
No 427
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.84 E-value=5.8e-20 Score=198.78 Aligned_cols=261 Identities=27% Similarity=0.368 Sum_probs=194.8
Q ss_pred CCCCCeecccCCeeeEEEEcCCCcEEEEEEeecCCcc---cHHHHHHHHHHhcCCCCC-CceeeeeEEEeCCeeEEEEEe
Q 003504 510 FDRGTLLAEGKFGPVYRGFLPGGIHVAVKVLVHGSTL---TDQEAARELEYLGRIKHP-NLVPLTGYCIAGDQRIAIYDY 585 (815)
Q Consensus 510 ~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~l~~~~~~---~~~~~~~E~~~l~~l~H~-niv~l~g~~~~~~~~~lv~ey 585 (815)
|...+.||.|+||.||++... ..+|+|.+...... ....+.+|+.+++.+.|+ +++++.+++......+++++|
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 556788999999999999977 78999998765433 366899999999999988 799999999777778999999
Q ss_pred CCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCC
Q 003504 586 MENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKA 665 (815)
Q Consensus 586 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~ 665 (815)
+.++++.+++..... ...+.......++.+++.++.|+| +.+++|||+||
T Consensus 80 ~~~~~l~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~l~~~H---~~~~~hrd~kp 129 (384)
T COG0515 80 VDGGSLEDLLKKIGR---------------------------KGPLSESEALFILAQILSALEYLH---SKGIIHRDIKP 129 (384)
T ss_pred CCCCcHHHHHHhccc---------------------------ccCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCH
Confidence 999999977754210 024667788899999999999999 78899999999
Q ss_pred CceEEcCCC-CeeecccccceecCCCC-------ccccccccccccCCcccCCCC-CCCCCcCcchhHHHHHHHHHhCCC
Q 003504 666 SSVYLDMNL-EPRLSDFGLAKIFGNGL-------DEEIARGSPGYIPPEFAQPDS-DFPTPKSDVYCYGVVLLELITGKK 736 (815)
Q Consensus 666 ~NIll~~~~-~~kl~Dfgla~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~ 736 (815)
+||+++..+ .++++|||.++...... ......|+..|+|||.+.+.. ..+....|+||+|++++++++|..
T Consensus 130 ~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~ 209 (384)
T COG0515 130 ENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLP 209 (384)
T ss_pred HHeeecCCCCeEEEeccCcceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCC
Confidence 999999988 79999999998665432 235567999999999988741 236889999999999999999999
Q ss_pred CCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003504 737 PLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGL 807 (815)
Q Consensus 737 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~ 807 (815)
||.............. .+...... .................+.+++..|+..+|..|.++.+....
T Consensus 210 p~~~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 210 PFEGEKNSSATSQTLK----IILELPTP-SLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred CCCCCCccccHHHHHH----HHHhcCCc-ccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 9764322100111111 11111110 000111111012334678899999999999999998877653
No 428
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.82 E-value=4.9e-20 Score=180.68 Aligned_cols=141 Identities=11% Similarity=0.130 Sum_probs=107.8
Q ss_pred CCeecccCCeeeEEEEcCCCcEEEEEEeecCCcc--c------------------------HHHHHHHHHHhcCCCCCCc
Q 003504 513 GTLLAEGKFGPVYRGFLPGGIHVAVKVLVHGSTL--T------------------------DQEAARELEYLGRIKHPNL 566 (815)
Q Consensus 513 ~~~ig~G~~g~Vy~~~~~~~~~vavK~l~~~~~~--~------------------------~~~~~~E~~~l~~l~H~ni 566 (815)
...||+|+||.||+|...+|++||||+++..... . .....+|++.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 4689999999999999888999999999754221 1 0122359999999988776
Q ss_pred eeeeeEEEeCCeeEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHH
Q 003504 567 VPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARA 646 (815)
Q Consensus 567 v~l~g~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~ 646 (815)
.....+. ....++||||++++++...... ...++.....+++.|++.+
T Consensus 82 ~~p~~~~--~~~~~iVmE~i~g~~l~~~~~~------------------------------~~~~~~~~~~~i~~qi~~~ 129 (190)
T cd05147 82 PCPEPIL--LKSHVLVMEFIGDDGWAAPRLK------------------------------DAPLSESKARELYLQVIQI 129 (190)
T ss_pred CCCcEEE--ecCCEEEEEEeCCCCCcchhhh------------------------------cCCCCHHHHHHHHHHHHHH
Confidence 4433222 2234899999999876544321 2246778889999999999
Q ss_pred HHHHhcCCCCCeeeccCCCCceEEcCCCCeeecccccceecC
Q 003504 647 LAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFG 688 (815)
Q Consensus 647 L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~ 688 (815)
|.|+|| ..+|+||||||+||+++ ++.++|+|||+|....
T Consensus 130 L~~l~H--~~giiHrDlkP~NIli~-~~~v~LiDFG~a~~~~ 168 (190)
T cd05147 130 MRILYQ--DCRLVHADLSEYNLLYH-DGKLYIIDVSQSVEHD 168 (190)
T ss_pred HHHHHH--hCCcccCCCCHHHEEEE-CCcEEEEEccccccCC
Confidence 999943 77999999999999998 4789999999997553
No 429
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.82 E-value=8.9e-21 Score=215.52 Aligned_cols=251 Identities=20% Similarity=0.195 Sum_probs=181.4
Q ss_pred CCCeecccCCeeeEEEEc-CCCcEEEEEEeecC--CcccHH----HHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEE
Q 003504 512 RGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHG--STLTDQ----EAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYD 584 (815)
Q Consensus 512 ~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~--~~~~~~----~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 584 (815)
...++|.|++|.|+.++. ......+.|..+.. ...... .+..|+.+-..++|||++..+..+.+.....-+||
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE 401 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSME 401 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhh
Confidence 468899999998887763 33333444433210 111111 25568888888999999998888887777777799
Q ss_pred eCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCC
Q 003504 585 YMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIK 664 (815)
Q Consensus 585 y~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk 664 (815)
|+++ +|..++... ..+.-..+-.+..|+..|+.|+| ..+|.|||+|
T Consensus 402 ~~~~-Dlf~~~~~~------------------------------~~~~~~e~~c~fKqL~~Gv~y~h---~~GiahrdlK 447 (601)
T KOG0590|consen 402 YCPY-DLFSLVMSN------------------------------GKLTPLEADCFFKQLLRGVKYLH---SMGLAHRDLK 447 (601)
T ss_pred cccH-HHHHHHhcc------------------------------cccchhhhhHHHHHHHHHHHHHH---hcCceeccCc
Confidence 9999 999998642 23455566789999999999999 8999999999
Q ss_pred CCceEEcCCCCeeecccccceecCCCC-----ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCC
Q 003504 665 ASSVYLDMNLEPRLSDFGLAKIFGNGL-----DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLG 739 (815)
Q Consensus 665 ~~NIll~~~~~~kl~Dfgla~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~ 739 (815)
++|++++.+|.+||+|||.+.....+. .....+|+..|+|||.+.+..+ .....||||.||++..|.+|+.||.
T Consensus 448 ~enll~~~~g~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~y-dpr~vDiwS~~ii~~~m~~~~~~Wk 526 (601)
T KOG0590|consen 448 LENLLVTENGILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEY-DPRAVDVWSCGIIYICMILGRFPWK 526 (601)
T ss_pred cccEEEecCCceEEeecCcceeeccCcchhhhhhcCcccCCcCcCccccccccc-CcchhhhhhccceEEEEecCCCccc
Confidence 999999999999999999987654332 3345679999999999987773 3456899999999999999999997
Q ss_pred CCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003504 740 DDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVG 806 (815)
Q Consensus 740 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~ 806 (815)
....++... .......+.-...-...-....+.+...++.++++.+|.+|.++++|++
T Consensus 527 ~a~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 527 VAKKSDNSF---------KTNNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred cccccccch---------hhhccccccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence 543322210 0000000000000000113345677889999999999999999999975
No 430
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.81 E-value=3.2e-20 Score=183.35 Aligned_cols=171 Identities=13% Similarity=0.095 Sum_probs=131.4
Q ss_pred HhcCCCCCCeecccCCeeeEEEEcCCCcEEEEEEeecCCcccHHH---------HHHHHHHhcCCCCCCceeeeeEEEeC
Q 003504 506 ATSNFDRGTLLAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQE---------AARELEYLGRIKHPNLVPLTGYCIAG 576 (815)
Q Consensus 506 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~---------~~~E~~~l~~l~H~niv~l~g~~~~~ 576 (815)
-..+|...+++|.|+||.||.+.. ++..+|||.++......+.. +++|+..+.++.||+|..+.+++...
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~ 107 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA 107 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence 457899999999999999999766 56789999997654433332 68899999999999999999886643
Q ss_pred --------CeeEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHH
Q 003504 577 --------DQRIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALA 648 (815)
Q Consensus 577 --------~~~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~ 648 (815)
...++||||+++.+|.++... + .....+++.++.
T Consensus 108 ~~~~~~~~~~~~lvmEyi~G~tL~~~~~~----------------------------------~----~~~~~~i~~~l~ 149 (232)
T PRK10359 108 ERKTLRYAHTYIMLIEYIEGVELNDMPEI----------------------------------S----EDVKAKIKASIE 149 (232)
T ss_pred ccccccccCCeEEEEEEECCccHHHhhhc----------------------------------c----HHHHHHHHHHHH
Confidence 247899999999999776421 1 124568999999
Q ss_pred HHhcCCCCCeeeccCCCCceEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHH
Q 003504 649 FLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVL 728 (815)
Q Consensus 649 yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl 728 (815)
.+| ..+++|||+||+||+++.++ ++|+|||............. +..... +..++|+|||||.+
T Consensus 150 ~lH---~~gi~H~Dikp~Nili~~~g-i~liDfg~~~~~~e~~a~d~-----------~vler~--y~~~~di~~lg~~~ 212 (232)
T PRK10359 150 SLH---QHGMVSGDPHKGNFIVSKNG-LRIIDLSGKRCTAQRKAKDR-----------IDLERH--YGIKNEIKDLGYYL 212 (232)
T ss_pred HHH---HcCCccCCCChHHEEEeCCC-EEEEECCCcccccchhhHHH-----------HHHHhH--hcccccccceeEee
Confidence 999 89999999999999999988 99999998875532211110 222222 45789999999987
Q ss_pred HHHH
Q 003504 729 LELI 732 (815)
Q Consensus 729 ~el~ 732 (815)
.-..
T Consensus 213 ~~~~ 216 (232)
T PRK10359 213 LIYK 216 (232)
T ss_pred hHHH
Confidence 6544
No 431
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.80 E-value=7.3e-20 Score=173.19 Aligned_cols=256 Identities=18% Similarity=0.219 Sum_probs=187.5
Q ss_pred hcCCCCCCeecccCCeeeEEEE-cCCCcEEEEEEeecCCcccHHHHHHHHHHhcCCCC-CCceeeeeEEEeCCeeEEEEE
Q 003504 507 TSNFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKH-PNLVPLTGYCIAGDQRIAIYD 584 (815)
Q Consensus 507 ~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H-~niv~l~g~~~~~~~~~lv~e 584 (815)
...|...+.||.|+||.+|.|. +.+|..||||+-+... ..-++..|.++.+.++| ..|..+..|..+.....+|||
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a--~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMd 91 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA--KHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMD 91 (341)
T ss_pred ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccC--CCcchhHHHHHHHHhccCCCCchhhhhccccccceeeee
Confidence 3578889999999999999999 6789999999865432 23356778888888864 677777778888888999999
Q ss_pred eCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCC
Q 003504 585 YMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIK 664 (815)
Q Consensus 585 y~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk 664 (815)
..-. ||.++..-+ ...++..+.+-+|-|+..-++|+| .+++||||||
T Consensus 92 LLGP-sLEdLfnfC-----------------------------~R~ftmkTvLMLaDQml~RiEyvH---~r~fiHRDIK 138 (341)
T KOG1163|consen 92 LLGP-SLEDLFNFC-----------------------------SRRFTMKTVLMLADQMLSRIEYVH---LRNFIHRDIK 138 (341)
T ss_pred ccCc-cHHHHHHHH-----------------------------hhhhhHHhHHHHHHHHHHHHHHHH---hhccccccCC
Confidence 8754 999988653 234667788889999999999999 8999999999
Q ss_pred CCceEEcCC---CCeeecccccceecCCCC--------ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh
Q 003504 665 ASSVYLDMN---LEPRLSDFGLAKIFGNGL--------DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT 733 (815)
Q Consensus 665 ~~NIll~~~---~~~kl~Dfgla~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t 733 (815)
|+|.|..-+ -.+.++|||+|+.+-... ......||..|.+-....+.. -+.+.|+=|+|.|+.++-.
T Consensus 139 PdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~e--qSRRDDmeSvgYvLmYfnr 216 (341)
T KOG1163|consen 139 PDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIE--QSRRDDMESVGYVLMYFNR 216 (341)
T ss_pred ccceeeccccccceEEEEeccchhhhccccccccCccccCCccceeeeehhhhhhhhhh--hhhhhhhhhhcceeeeeec
Confidence 999999754 358999999999764321 122335899999888766555 4778999999999999999
Q ss_pred CCCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 003504 734 GKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLK 809 (815)
Q Consensus 734 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~ 809 (815)
|..||.+.......+.... +.+. +.. .....+ ....+.++.-.+.-|-..--++-|...-+.+...
T Consensus 217 G~LPWQglka~tk~QKyEk----I~Ek-K~s-~~ie~L----C~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFr 282 (341)
T KOG1163|consen 217 GSLPWQGLKAATKKQKYEK----ISEK-KMS-TPIEVL----CKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFR 282 (341)
T ss_pred CCCcccccchhhHHHHHHH----HHHh-hcC-CCHHHH----hCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHH
Confidence 9999997543322221111 1111 100 000111 2234566777788888888888887776665543
No 432
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.80 E-value=2.2e-19 Score=173.15 Aligned_cols=185 Identities=17% Similarity=0.100 Sum_probs=138.4
Q ss_pred CCCCeecccCCeeeEEEEcCCCcEEEEEEeecCCccc----HHHHHHHHHHhcCCC-CCCceeeeeEEEeCCeeEEEEEe
Q 003504 511 DRGTLLAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLT----DQEAARELEYLGRIK-HPNLVPLTGYCIAGDQRIAIYDY 585 (815)
Q Consensus 511 ~~~~~ig~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~----~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lv~ey 585 (815)
.....|++|+||+||.+.- ++.+++.+.+....... ...+.+|+++|+++. |+++.+++++ ...+++|||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmey 79 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSY 79 (218)
T ss_pred ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEee
Confidence 3467899999999997766 57788888775532211 125789999999995 5889999886 456899999
Q ss_pred CCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccC-C
Q 003504 586 MENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDI-K 664 (815)
Q Consensus 586 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDl-k 664 (815)
+++.+|...+.. . ...++.+++.+|+++| ..+|||||| |
T Consensus 80 I~G~~L~~~~~~------------------------------~-------~~~~~~qi~~~L~~lH---~~GIvHrDL~k 119 (218)
T PRK12274 80 LAGAAMYQRPPR------------------------------G-------DLAYFRAARRLLQQLH---RCGVAHNDLAK 119 (218)
T ss_pred ecCccHHhhhhh------------------------------h-------hHHHHHHHHHHHHHHH---HCcCccCCCCC
Confidence 999888654321 0 1246778999999999 899999999 7
Q ss_pred CCceEEcCCCCeeecccccceecCCCCc--------------cccccccccccCCcccCCCCCCCCCcCcchhHHHHHHH
Q 003504 665 ASSVYLDMNLEPRLSDFGLAKIFGNGLD--------------EEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLE 730 (815)
Q Consensus 665 ~~NIll~~~~~~kl~Dfgla~~~~~~~~--------------~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~e 730 (815)
|.|||++.++.++|+|||+|........ ..-...++.|++|+-........-.+.+.++-|.-+|.
T Consensus 120 p~NILv~~~g~i~LIDFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~ 199 (218)
T PRK12274 120 EANWLVQEDGSPAVIDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYR 199 (218)
T ss_pred cceEEEcCCCCEEEEECCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHH
Confidence 9999999999999999999986553321 00112577788887543322212256789999999999
Q ss_pred HHhCCCCCCC
Q 003504 731 LITGKKPLGD 740 (815)
Q Consensus 731 l~tg~~p~~~ 740 (815)
++||+.|...
T Consensus 200 ~~~~~~~~~~ 209 (218)
T PRK12274 200 FVTRRVLHWE 209 (218)
T ss_pred HHhccCCccc
Confidence 9999988664
No 433
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.80 E-value=3e-19 Score=175.97 Aligned_cols=140 Identities=14% Similarity=0.177 Sum_probs=110.1
Q ss_pred CCeecccCCeeeEEEEcCCCcEEEEEEeecCCccc--------------------------HHHHHHHHHHhcCCCCCCc
Q 003504 513 GTLLAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLT--------------------------DQEAARELEYLGRIKHPNL 566 (815)
Q Consensus 513 ~~~ig~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~--------------------------~~~~~~E~~~l~~l~H~ni 566 (815)
...||+|+||.||+|...+|+.||||+++...... ...+.+|.+.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 46899999999999998789999999997642210 1124678999999999987
Q ss_pred eeeeeEEEeCCeeEEEEEeCCCCChhhh-hccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHH
Q 003504 567 VPLTGYCIAGDQRIAIYDYMENGNLQNL-LHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTAR 645 (815)
Q Consensus 567 v~l~g~~~~~~~~~lv~ey~~~gsL~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~ 645 (815)
.....+... ..++||||++++++... +.. ..++.....+++.+++.
T Consensus 82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~-------------------------------~~~~~~~~~~i~~~l~~ 128 (190)
T cd05145 82 PVPEPILLK--KNVLVMEFIGDDGSPAPRLKD-------------------------------VPLEEEEAEELYEQVVE 128 (190)
T ss_pred CCceEEEec--CCEEEEEEecCCCchhhhhhh-------------------------------ccCCHHHHHHHHHHHHH
Confidence 544443332 35899999998855333 321 23456678899999999
Q ss_pred HHHHHhcCCC-CCeeeccCCCCceEEcCCCCeeecccccceecCC
Q 003504 646 ALAFLHHGCS-PPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGN 689 (815)
Q Consensus 646 ~L~yLH~~~~-~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~ 689 (815)
++.|+| . .+|+||||||+||+++ ++.++|+|||++.....
T Consensus 129 ~l~~lH---~~~givHrDlkP~NIll~-~~~~~liDFG~a~~~~~ 169 (190)
T cd05145 129 QMRRLY---QEAGLVHGDLSEYNILYH-DGKPYIIDVSQAVELDH 169 (190)
T ss_pred HHHHHH---HhCCEecCCCChhhEEEE-CCCEEEEEcccceecCC
Confidence 999999 6 8999999999999999 78999999999987653
No 434
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.80 E-value=8.1e-21 Score=204.59 Aligned_cols=129 Identities=30% Similarity=0.285 Sum_probs=82.2
Q ss_pred EecCCCCCccCCCcccccCCCCCCEEECcCCCCC-----CCCcccCCCCCCCEEEccCCcCCc------cCCccccCCCC
Q 003504 33 FLASNSGLSGSVPDTTIGKLSKLQSLDLSENNIT-----ALPSDLWSLGSLKSLNLSYNRISG------SLPSNIGNFGL 101 (815)
Q Consensus 33 l~~~~~~~~g~~~~~~~~~l~~L~~L~Ls~n~l~-----~lp~~~~~l~~L~~L~L~~N~i~~------~~~~~~~~l~~ 101 (815)
+++.++.+++.--...+..+++|++|+|+++.++ .++..+...++|++|+++++.+.+ .++..|..+++
T Consensus 3 l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~ 82 (319)
T cd00116 3 LSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCG 82 (319)
T ss_pred cccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCc
Confidence 4566666664433456777778888888888874 355556667778888888887762 22345666667
Q ss_pred CcEEEccCCcCCCCChhhhcCCcC---CCEEEcCCCcccc----cCCcccccc-cccceeeccCCcCC
Q 003504 102 LEVFDLSNNNFSGEIPAAISSLVS---LRVLKLDGNMFQW----SIPPGLLNC-QSLVTVDLSMNQLN 161 (815)
Q Consensus 102 L~~L~Ls~N~l~~~~p~~~~~l~~---L~~L~L~~N~l~~----~~~~~~~~l-~~L~~L~l~~N~l~ 161 (815)
|+.|+|++|.+.+..+..|..+.+ |++|++++|++++ .+...+..+ ++|+.|++++|.++
T Consensus 83 L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~ 150 (319)
T cd00116 83 LQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLE 150 (319)
T ss_pred eeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCC
Confidence 777777777776666666655555 7777777776652 122233344 56666666666665
No 435
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.79 E-value=1.2e-18 Score=172.59 Aligned_cols=256 Identities=18% Similarity=0.227 Sum_probs=187.0
Q ss_pred CCCCCCeecccCCeeeEEEE-cCCCcEEEEEEeecCCcccHHHHHHHHHHhcCC-CCCCceeeeeEEEeCCeeEEEEEeC
Q 003504 509 NFDRGTLLAEGKFGPVYRGF-LPGGIHVAVKVLVHGSTLTDQEAARELEYLGRI-KHPNLVPLTGYCIAGDQRIAIYDYM 586 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ey~ 586 (815)
.|.++++||+|+||+++.|+ +-++.+||||.-...+ +.-++..|....+.| ..+.|..++.+-.++-...+|+|.+
T Consensus 29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS--~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL 106 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS--EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL 106 (449)
T ss_pred cceeccccccCcceeeecccccccCceEEEEeccccC--CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh
Confidence 68889999999999999999 5678999999754322 233566677766666 4688888877767777888999987
Q ss_pred CCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCC
Q 003504 587 ENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKAS 666 (815)
Q Consensus 587 ~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~ 666 (815)
-. ||.++..-+ +..++.++..-||.|+..-++|+| ++.+|.|||||+
T Consensus 107 GP-SLEDLFD~C-----------------------------gR~FSvKTV~miA~Qmi~rie~vH---~k~LIYRDIKPd 153 (449)
T KOG1165|consen 107 GP-SLEDLFDLC-----------------------------GRRFSVKTVAMIAKQMITRIEYVH---EKDLIYRDIKPD 153 (449)
T ss_pred Cc-CHHHHHHHh-----------------------------cCcccHHhHHHHHHHHHHHHHHHH---hcceeecccCcc
Confidence 44 898888643 446788889999999999999999 899999999999
Q ss_pred ceEEcCCC-----CeeecccccceecCCCC--------ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh
Q 003504 667 SVYLDMNL-----EPRLSDFGLAKIFGNGL--------DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT 733 (815)
Q Consensus 667 NIll~~~~-----~~kl~Dfgla~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t 733 (815)
|+||..-+ .+.|+|||+|+.+.... ......||..||+-....+.. -+.+.|.=|+|=|+.+.+.
T Consensus 154 NFLIGrp~~k~~n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrE--QSRRDDLEaLGHvFmYFLR 231 (449)
T KOG1165|consen 154 NFLIGRPGTKDANVIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGRE--QSRRDDLEALGHVFMYFLR 231 (449)
T ss_pred ceeecCCCCCCCceEEEEeccchhhhcCccccccCccccccccccceeeeEeeccccch--hhhhhhHHHhhhhhhhhcc
Confidence 99998544 48999999999876433 223345999999999888877 4788999999999999999
Q ss_pred CCCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhh
Q 003504 734 GKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDI 811 (815)
Q Consensus 734 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 811 (815)
|..||.+........ ++-+-....+....... .+..+.++..-+.---..+-.+-|..+-+...+..+
T Consensus 232 GsLPWQGLKA~tnK~-------kYeKIGe~Kr~T~i~~L---c~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dv 299 (449)
T KOG1165|consen 232 GSLPWQGLKADTNKE-------KYEKIGETKRSTPIEVL---CEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDV 299 (449)
T ss_pred CCCccccccCcchHH-------HHHHhccccccCCHHHH---HhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHH
Confidence 999998743221111 11111111111111111 223455666666666667778888887776666554
No 436
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.78 E-value=2e-19 Score=181.76 Aligned_cols=196 Identities=21% Similarity=0.238 Sum_probs=137.9
Q ss_pred CCCCceeeeeEEEeC---------------------------CeeEEEEEeCCCCChhhhhccCCCCCccccCCCCCccc
Q 003504 562 KHPNLVPLTGYCIAG---------------------------DQRIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWE 614 (815)
Q Consensus 562 ~H~niv~l~g~~~~~---------------------------~~~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~ 614 (815)
+|||||++.++|.+. ...|+||.-.+. +|.+++-..
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~---------------- 336 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTR---------------- 336 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcC----------------
Confidence 599999999987652 135788877766 888888542
Q ss_pred cCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCceEE--cCCC--CeeecccccceecCC-
Q 003504 615 EDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYL--DMNL--EPRLSDFGLAKIFGN- 689 (815)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NIll--~~~~--~~kl~Dfgla~~~~~- 689 (815)
..+...+.-|..|+.+|+.||| .++|.|||+|++|||+ |+|+ .+.|+|||.+-.-..
T Consensus 337 ---------------~~s~r~~~~~laQlLEav~hL~---~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~h 398 (598)
T KOG4158|consen 337 ---------------HRSYRTGRVILAQLLEAVTHLH---KHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNH 398 (598)
T ss_pred ---------------CCchHHHHHHHHHHHHHHHHHH---HccchhhcccccceEEEecCCCCcEEEEcccceeeecccc
Confidence 2344556668889999999999 8999999999999998 4444 478999998753321
Q ss_pred ------CCccccccccccccCCcccCCCCCC----CCCcCcchhHHHHHHHHHhCCCCCCCCCCccccccHHHHHHHHHh
Q 003504 690 ------GLDEEIARGSPGYIPPEFAQPDSDF----PTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVR 759 (815)
Q Consensus 690 ------~~~~~~~~gt~~y~aPE~~~~~~~~----~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 759 (815)
.+.....-|.-.-||||+.....+. ...|+|.|+.|-+.||+++...||..... .. ++
T Consensus 399 Glqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGe--m~----------L~ 466 (598)
T KOG4158|consen 399 GLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGE--ML----------LD 466 (598)
T ss_pred ccccccccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccch--he----------ec
Confidence 1112222366778999987655432 25689999999999999999999975211 11 11
Q ss_pred cCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 003504 760 NNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLL 808 (815)
Q Consensus 760 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L 808 (815)
...+++.- ....|+.++..+.+++...+++||++||+..-....|
T Consensus 467 ~r~Yqe~q----LPalp~~vpp~~rqlV~~lL~r~pskRvsp~iAANvl 511 (598)
T KOG4158|consen 467 TRTYQESQ----LPALPSRVPPVARQLVFDLLKRDPSKRVSPNIAANVL 511 (598)
T ss_pred hhhhhhhh----CCCCcccCChHHHHHHHHHhcCCccccCCccHHHhHH
Confidence 11111111 1223666777889999999999999999876554433
No 437
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.78 E-value=3.8e-21 Score=172.47 Aligned_cols=162 Identities=27% Similarity=0.432 Sum_probs=132.3
Q ss_pred ccCCCCCCEEECcCCCCCCCCcccCCCCCCCEEEccCCcCCccCCccccCCCCCcEEEccCCcCCCCChhhhcCCcCCCE
Q 003504 49 IGKLSKLQSLDLSENNITALPSDLWSLGSLKSLNLSYNRISGSLPSNIGNFGLLEVFDLSNNNFSGEIPAAISSLVSLRV 128 (815)
Q Consensus 49 ~~~l~~L~~L~Ls~n~l~~lp~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 128 (815)
+-.+++++.|.||+|+++.+|+.+..+.+|+.|++++|+|. .+|..++.+++|+.|+++-|++. ++|..|+.++-|+.
T Consensus 29 Lf~~s~ITrLtLSHNKl~~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~lev 106 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLTVVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEV 106 (264)
T ss_pred ccchhhhhhhhcccCceeecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhh
Confidence 44566778888888888888888888888888888888887 67788888888888888888887 77888888888888
Q ss_pred EEcCCCcccc-cCCcccccccccceeeccCCcCCCCCCchhhccCCCCCEEEcCCCcccCCCCCCCCCCCCCeEeccCCc
Q 003504 129 LKLDGNMFQW-SIPPGLLNCQSLVTVDLSMNQLNGSLPDGFGAAFPKLKSLNLAGNEIKGRDTHFAGLKSITNLNISGNL 207 (815)
Q Consensus 129 L~L~~N~l~~-~~~~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~ 207 (815)
|||+.|++.. .+|..|..++.|+-|+|++|.+. .+|..++ .+++|+.|.+..|.+-.+|..++.++.|++|.+.+|+
T Consensus 107 ldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg-~lt~lqil~lrdndll~lpkeig~lt~lrelhiqgnr 184 (264)
T KOG0617|consen 107 LDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVG-KLTNLQILSLRDNDLLSLPKEIGDLTRLRELHIQGNR 184 (264)
T ss_pred hhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhh-hhcceeEEeeccCchhhCcHHHHHHHHHHHHhcccce
Confidence 8888887763 57778888888888888888887 7887774 4788888888888888888888888888888888888
Q ss_pred CCCcchh
Q 003504 208 FQGSVMG 214 (815)
Q Consensus 208 l~~~~~~ 214 (815)
++.+|+.
T Consensus 185 l~vlppe 191 (264)
T KOG0617|consen 185 LTVLPPE 191 (264)
T ss_pred eeecChh
Confidence 8877765
No 438
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.77 E-value=7.9e-20 Score=196.90 Aligned_cols=105 Identities=22% Similarity=0.129 Sum_probs=54.6
Q ss_pred EEECcCCCCC--CCCcccCCCCCCCEEEccCCcCCcc----CCccccCCCCCcEEEccCCcCCC------CChhhhcCCc
Q 003504 57 SLDLSENNIT--ALPSDLWSLGSLKSLNLSYNRISGS----LPSNIGNFGLLEVFDLSNNNFSG------EIPAAISSLV 124 (815)
Q Consensus 57 ~L~Ls~n~l~--~lp~~~~~l~~L~~L~L~~N~i~~~----~~~~~~~l~~L~~L~Ls~N~l~~------~~p~~~~~l~ 124 (815)
.|+|..+.++ ..+.-+..+.+|++|+|+++.++.. ++..+...++|++|++++|.+.+ .++..|..++
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcC
Confidence 3566666665 2222223355566666666666432 34445555566666666666552 1233445555
Q ss_pred CCCEEEcCCCcccccCCcccccccc---cceeeccCCcCC
Q 003504 125 SLRVLKLDGNMFQWSIPPGLLNCQS---LVTVDLSMNQLN 161 (815)
Q Consensus 125 ~L~~L~L~~N~l~~~~~~~~~~l~~---L~~L~l~~N~l~ 161 (815)
+|+.|+|++|.+....+..+..+.+ |++|++++|+++
T Consensus 82 ~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~ 121 (319)
T cd00116 82 GLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLG 121 (319)
T ss_pred ceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccc
Confidence 5666666655555444444444333 555555555554
No 439
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.77 E-value=1e-20 Score=169.72 Aligned_cols=157 Identities=30% Similarity=0.480 Sum_probs=80.7
Q ss_pred ccCCCCCCCEEEccCCcCCccCCccccCCCCCcEEEccCCcCCCCChhhhcCCcCCCEEEcCCCcccccCCccccccccc
Q 003504 71 DLWSLGSLKSLNLSYNRISGSLPSNIGNFGLLEVFDLSNNNFSGEIPAAISSLVSLRVLKLDGNMFQWSIPPGLLNCQSL 150 (815)
Q Consensus 71 ~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 150 (815)
.++.+.+++.|-|++|+++ ..|..++.+.+|+.|++++|+|+ .+|.+++.|++|+.|+++-|++. ..|..|+.++.|
T Consensus 28 gLf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~l 104 (264)
T KOG0617|consen 28 GLFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPAL 104 (264)
T ss_pred cccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchh
Confidence 3444555555555555555 34445555555555555555555 44555555555555555555554 455555555555
Q ss_pred ceeeccCCcCC-CCCCchhhccCCCCCEEEcCCCcccCCCCCCCCCCCCCeEeccCCcCCCcchhhh-hcccceeeeccc
Q 003504 151 VTVDLSMNQLN-GSLPDGFGAAFPKLKSLNLAGNEIKGRDTHFAGLKSITNLNISGNLFQGSVMGVF-LESLEVIDLRSN 228 (815)
Q Consensus 151 ~~L~l~~N~l~-~~lp~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~-l~~L~~L~L~~N 228 (815)
+.|||++|++. ..+|..||. +..|+-|+|++|.+..+|+..+++++|+.|.+..|.+-++|...- +..|++|.+++|
T Consensus 105 evldltynnl~e~~lpgnff~-m~tlralyl~dndfe~lp~dvg~lt~lqil~lrdndll~lpkeig~lt~lrelhiqgn 183 (264)
T KOG0617|consen 105 EVLDLTYNNLNENSLPGNFFY-MTTLRALYLGDNDFEILPPDVGKLTNLQILSLRDNDLLSLPKEIGDLTRLRELHIQGN 183 (264)
T ss_pred hhhhccccccccccCCcchhH-HHHHHHHHhcCCCcccCChhhhhhcceeEEeeccCchhhCcHHHHHHHHHHHHhcccc
Confidence 55555555543 234444442 445555555555555555555555555555555555555444433 455555555555
Q ss_pred ccc
Q 003504 229 QFQ 231 (815)
Q Consensus 229 ~l~ 231 (815)
+++
T Consensus 184 rl~ 186 (264)
T KOG0617|consen 184 RLT 186 (264)
T ss_pred eee
Confidence 554
No 440
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.76 E-value=1.7e-19 Score=194.34 Aligned_cols=225 Identities=25% Similarity=0.283 Sum_probs=173.7
Q ss_pred eecccCCeeeEEEE----cCCCcEEEEEEeecCCccc--HHHHHHHHHHhcCCC-CCCceeeeeEEEeCCeeEEEEEeCC
Q 003504 515 LLAEGKFGPVYRGF----LPGGIHVAVKVLVHGSTLT--DQEAARELEYLGRIK-HPNLVPLTGYCIAGDQRIAIYDYME 587 (815)
Q Consensus 515 ~ig~G~~g~Vy~~~----~~~~~~vavK~l~~~~~~~--~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lv~ey~~ 587 (815)
++|+|+||.|+.+. .+.|..+|+|++++..... ......|..+++.++ ||.+|++...++.....+++.+|..
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 36899999999765 3446778999886643221 124556888888887 9999999999999999999999999
Q ss_pred CCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCc
Q 003504 588 NGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASS 667 (815)
Q Consensus 588 ~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~N 667 (815)
+|.|...+.+. ...+..........+|-+++++| +.+++|||+|++|
T Consensus 81 gg~lft~l~~~------------------------------~~f~~~~~~~~~aelaLald~lh---~l~iiyrd~k~en 127 (612)
T KOG0603|consen 81 GGDLFTRLSKE------------------------------VMFDELDVAFYLAELALALDHLH---KLGIAYRDYKLEN 127 (612)
T ss_pred cchhhhccccC------------------------------CchHHHHHHHHHHHHHHHHhhcc---hhHHHHhcccccc
Confidence 99998888642 12233333445556788899999 8999999999999
Q ss_pred eEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCcccc
Q 003504 668 VYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKE 747 (815)
Q Consensus 668 Ill~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~ 747 (815)
|+++.+|.+++.|||+++..-... ..+||..|||||++.+ .....|.|||||+++|++||..||..
T Consensus 128 illd~~Ghi~~tdfglske~v~~~---~~cgt~eymApEI~~g----h~~a~D~ws~gvl~felltg~~pf~~------- 193 (612)
T KOG0603|consen 128 VLLLLEGHIKLTDFGLSKEAVKEK---IACGTYEYRAPEIING----HLSAADWWSFGVLAFELLTGTLPFGG------- 193 (612)
T ss_pred eeecccCccccCCchhhhHhHhhh---hcccchhhhhhHhhhc----cCCcccchhhhhhHHHHhhCCCCCch-------
Confidence 999999999999999998764332 2389999999999983 35689999999999999999999975
Q ss_pred ccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCH
Q 003504 748 GNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSM 801 (815)
Q Consensus 748 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~ 801 (815)
..++.++.. ....|.+....+.+++...+..+|..|--.
T Consensus 194 ----~~~~~Il~~-----------~~~~p~~l~~~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 194 ----DTMKRILKA-----------ELEMPRELSAEARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred ----HHHHHHhhh-----------ccCCchhhhHHHHHHHHHHHhhCHHHHhcc
Confidence 112223221 122366777788888888888889888744
No 441
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.76 E-value=9.2e-19 Score=178.27 Aligned_cols=236 Identities=21% Similarity=0.217 Sum_probs=151.4
Q ss_pred CCCeecccCCeeeEEEEc-CCCcEEEEEEeecCC---cccHHHHHHHHHHhcCCCC----------CCceeeeeEEEe--
Q 003504 512 RGTLLAEGKFGPVYRGFL-PGGIHVAVKVLVHGS---TLTDQEAARELEYLGRIKH----------PNLVPLTGYCIA-- 575 (815)
Q Consensus 512 ~~~~ig~G~~g~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~H----------~niv~l~g~~~~-- 575 (815)
.++.||.|+++.||.++. .+++++|||++.... ....+++++|.-....+.+ -.++-.++....
T Consensus 16 ~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~~ 95 (288)
T PF14531_consen 16 RGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIPG 95 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEETT
T ss_pred EccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEcC
Confidence 367999999999999996 458999999886432 2234667777765555433 122222222211
Q ss_pred -------CC--------eeEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHH
Q 003504 576 -------GD--------QRIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIA 640 (815)
Q Consensus 576 -------~~--------~~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 640 (815)
.. ..+++|+-+. ++|.+++.... ........+....|+.+.
T Consensus 96 ~~~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~-----------------------~~~~~~~~l~~~arl~lT 151 (288)
T PF14531_consen 96 KPPFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALF-----------------------SRAQTHSPLAFAARLSLT 151 (288)
T ss_dssp S-SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHH-----------------------HHTTTSHHHHHHHHHHHH
T ss_pred CCcceecCCCCccceeehhhhccchhh-hcHHHHHHHHh-----------------------hcccccchhHHHHHHHHH
Confidence 11 2356777774 48888764310 000112346677889999
Q ss_pred HHHHHHHHHHhcCCCCCeeeccCCCCceEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCC------CCC
Q 003504 641 LGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPD------SDF 714 (815)
Q Consensus 641 ~~ia~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~ 714 (815)
.|+.+.+++|| ..++||+||+|+|++++.+|.++|+||+.....+... .....+..|.+||..... ...
T Consensus 152 ~Q~I~lvA~Lh---~~GlVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~--~~~~~~~~~~PPe~~~~~~~~~~~~~~ 226 (288)
T PF14531_consen 152 VQMIRLVANLH---SYGLVHGDIKPENFLLDQDGGVFLGDFSSLVRAGTRY--RCSEFPVAFTPPELESCAGQFGQNNAP 226 (288)
T ss_dssp HHHHHHHHHHH---HTTEEEST-SGGGEEE-TTS-EEE--GGGEEETTEEE--EGGGS-TTTS-HHHHHHHTSCHHSEEE
T ss_pred HHHHHHHHHHh---hcceEecccceeeEEEcCCCCEEEcChHHHeecCcee--eccCCCcccCChhhhhhhcccCcccce
Confidence 99999999999 8999999999999999999999999998877654322 213356789999976432 112
Q ss_pred CCCcCcchhHHHHHHHHHhCCCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccC
Q 003504 715 PTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADL 794 (815)
Q Consensus 715 ~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~d 794 (815)
++.+.|.|++|+++|.|+.|..||+...++..... .-..+. +.++.+..++...++++
T Consensus 227 ~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~~---------------------~f~~C~-~~Pe~v~~LI~~lL~~~ 284 (288)
T PF14531_consen 227 YTFATDAWQLGITLYSLWCGRLPFGLSSPEADPEW---------------------DFSRCR-DMPEPVQFLIRGLLQRN 284 (288)
T ss_dssp E-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSGG---------------------GGTTSS----HHHHHHHHHHT-SS
T ss_pred eeeccCHHHHHHHHHHHHHccCCCCCCCccccccc---------------------cchhcC-CcCHHHHHHHHHHccCC
Confidence 58889999999999999999999986433222110 122334 78889999999999999
Q ss_pred CCCC
Q 003504 795 PLKR 798 (815)
Q Consensus 795 P~~R 798 (815)
|++|
T Consensus 285 ~~~R 288 (288)
T PF14531_consen 285 PEDR 288 (288)
T ss_dssp GGGS
T ss_pred cccC
Confidence 9988
No 442
>PRK10345 hypothetical protein; Provisional
Probab=99.75 E-value=1.1e-17 Score=165.21 Aligned_cols=136 Identities=15% Similarity=0.173 Sum_probs=104.9
Q ss_pred CCCCeecccCCeeeEEEEcCCCcEEEEEEeecCCcccHHHHHHHHHHhcCC-----CCCCceeeeeEEEeCC---e-eEE
Q 003504 511 DRGTLLAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRI-----KHPNLVPLTGYCIAGD---Q-RIA 581 (815)
Q Consensus 511 ~~~~~ig~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-----~H~niv~l~g~~~~~~---~-~~l 581 (815)
...+.||+|+||.||. ...++.. +||++........+.+.+|+.++..+ +||||++++|++.+.. . ..+
T Consensus 5 ~~~~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~ 82 (210)
T PRK10345 5 SEQSPLGTGRHRKCYA-HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDV 82 (210)
T ss_pred CCcceecCCCceEEEE-CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEE
Confidence 3467999999999996 3334444 79988765445567899999999999 5799999999998864 3 337
Q ss_pred EEEe--CCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHH-HHHhcCCCCCe
Q 003504 582 IYDY--MENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARAL-AFLHHGCSPPI 658 (815)
Q Consensus 582 v~ey--~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L-~yLH~~~~~~i 658 (815)
|+|| +++|+|.+++.+. .++.. ..++.++..++ +||| +.+|
T Consensus 83 I~e~~G~~~~tL~~~l~~~-------------------------------~~~e~--~~~~~~~L~~l~~yLh---~~~I 126 (210)
T PRK10345 83 IADFDGKPSITLTEFAEQC-------------------------------RYEED--VAQLRQLLKKLKRYLL---DNRI 126 (210)
T ss_pred EecCCCCcchhHHHHHHcc-------------------------------cccHh--HHHHHHHHHHHHHHHH---HCCE
Confidence 8999 6689999999641 12222 34567777777 9999 8999
Q ss_pred eeccCCCCceEEcC----CCCeeecccccc
Q 003504 659 IHRDIKASSVYLDM----NLEPRLSDFGLA 684 (815)
Q Consensus 659 vHrDlk~~NIll~~----~~~~kl~Dfgla 684 (815)
|||||||+|||++. ++.++|+||+.+
T Consensus 127 vhrDlKp~NILl~~~~~~~~~~~LiDg~G~ 156 (210)
T PRK10345 127 VTMELKPQNILCQRISESEVIPVVCDNIGE 156 (210)
T ss_pred eecCCCHHHEEEeccCCCCCcEEEEECCCC
Confidence 99999999999974 347999995433
No 443
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.73 E-value=9.7e-19 Score=197.27 Aligned_cols=249 Identities=23% Similarity=0.243 Sum_probs=175.4
Q ss_pred CCCCCCeecccCCeeeEEEEcCCCcEEEEEEeecCC-cccHHHHHHHHHH--hcCCCCCCceeeeeEEEeCCeeEEEEEe
Q 003504 509 NFDRGTLLAEGKFGPVYRGFLPGGIHVAVKVLVHGS-TLTDQEAARELEY--LGRIKHPNLVPLTGYCIAGDQRIAIYDY 585 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~--l~~l~H~niv~l~g~~~~~~~~~lv~ey 585 (815)
+|...+.+|+++|=+|.+|+.+.|. |+||++-+.. ...-..|+++++- ..-++|||.+++.-.-......|+|-+|
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqy 102 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQY 102 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHH
Confidence 5677889999999999999998887 9999986654 3334445444333 4455899999997776666667788888
Q ss_pred CCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCC
Q 003504 586 MENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKA 665 (815)
Q Consensus 586 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~ 665 (815)
..+ +|++.|.. ..-+...+.+-||.|+..||.-+| ..+|+|||||.
T Consensus 103 vkh-nLyDRlST------------------------------RPFL~~iEKkWiaFQLL~al~qcH---~~gVcHGDIKs 148 (1431)
T KOG1240|consen 103 VKH-NLYDRLST------------------------------RPFLVLIEKKWIAFQLLKALSQCH---KLGVCHGDIKS 148 (1431)
T ss_pred Hhh-hhhhhhcc------------------------------chHHHHHHHHHHHHHHHHHHHHHH---HcCcccccccc
Confidence 877 88888854 234556667789999999999999 89999999999
Q ss_pred CceEEcCCCCeeecccccceec--CCCC--ccc----cccccccccCCcccCCCC--------C-CCCCcCcchhHHHHH
Q 003504 666 SSVYLDMNLEPRLSDFGLAKIF--GNGL--DEE----IARGSPGYIPPEFAQPDS--------D-FPTPKSDVYCYGVVL 728 (815)
Q Consensus 666 ~NIll~~~~~~kl~Dfgla~~~--~~~~--~~~----~~~gt~~y~aPE~~~~~~--------~-~~~~~~Dv~S~Gvvl 728 (815)
+||||+.=.-+.|+||.--+.. ..+. ... +...-.-|+|||-+.... . ..+++-||||.|||+
T Consensus 149 ENILiTSWNW~~LtDFAsFKPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCVi 228 (1431)
T KOG1240|consen 149 ENILITSWNWLYLTDFASFKPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVI 228 (1431)
T ss_pred ceEEEeeechhhhhcccccCCccCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHH
Confidence 9999998888999999865432 2211 111 111223599999765421 1 136788999999999
Q ss_pred HHHHh-CCCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003504 729 LELIT-GKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGL 807 (815)
Q Consensus 729 ~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~ 807 (815)
.||++ |++||.- .++.++-.. . ..++....+.- ....+..++..|++.||++|.++++.++.
T Consensus 229 aELf~Eg~PlF~L-------SQL~aYr~~-------~-~~~~e~~Le~I--ed~~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 229 AELFLEGRPLFTL-------SQLLAYRSG-------N-ADDPEQLLEKI--EDVSLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred HHHHhcCCCcccH-------HHHHhHhcc-------C-ccCHHHHHHhC--cCccHHHHHHHHHccCchhccCHHHHHHh
Confidence 99999 7888862 222222111 0 00110000000 11247789999999999999999999986
Q ss_pred HH
Q 003504 808 LK 809 (815)
Q Consensus 808 L~ 809 (815)
-.
T Consensus 292 yr 293 (1431)
T KOG1240|consen 292 YR 293 (1431)
T ss_pred hh
Confidence 43
No 444
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.71 E-value=3.3e-17 Score=189.44 Aligned_cols=196 Identities=20% Similarity=0.230 Sum_probs=156.6
Q ss_pred HHHHhcCCCCCCeecccCCeeeEEEEcCCCcEEEEEEeecCCcccHHHHHHHHHHhcCCC---CCCceeeeeEEEeCCee
Q 003504 503 LLSATSNFDRGTLLAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIK---HPNLVPLTGYCIAGDQR 579 (815)
Q Consensus 503 l~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~g~~~~~~~~ 579 (815)
.......|.+.+.||+|+||+||+|...+|+.||+|+=+.....+ |.--.+++.||+ -+-|+.+..++...+..
T Consensus 693 ~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WE---fYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S 769 (974)
T KOG1166|consen 693 FEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWE---FYICLQVMERLKPQMLPSIMHISSAHVFQNAS 769 (974)
T ss_pred eeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCcee---eeehHHHHHhhchhhhcchHHHHHHHccCCcc
Confidence 344456788889999999999999998889999999865543322 222223333444 23455666666677888
Q ss_pred EEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCee
Q 003504 580 IAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPII 659 (815)
Q Consensus 580 ~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~iv 659 (815)
++|+||.+.|+|.+++.. .+..+|.-.+.++.++++.++.|| ..+||
T Consensus 770 ~lv~ey~~~Gtlld~~N~------------------------------~~~m~e~lv~~~~~qml~ive~lH---~~~II 816 (974)
T KOG1166|consen 770 VLVSEYSPYGTLLDLINT------------------------------NKVMDEYLVMFFSCQMLRIVEHLH---AMGII 816 (974)
T ss_pred eeeeeccccccHHHhhcc------------------------------CCCCCchhhhHHHHHHHHHHHHHH---hccee
Confidence 999999999999999952 456788888999999999999999 89999
Q ss_pred eccCCCCceEEcC-------CCCeeecccccceecC---CCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHH
Q 003504 660 HRDIKASSVYLDM-------NLEPRLSDFGLAKIFG---NGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLL 729 (815)
Q Consensus 660 HrDlk~~NIll~~-------~~~~kl~Dfgla~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~ 729 (815)
|+||||+|.||.. ...++|+|||.+..+. .+......++|..+-.+|...+.. .+.+.|-|.++-+++
T Consensus 817 HgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grp--WtYq~DyfGlAa~~h 894 (974)
T KOG1166|consen 817 HGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRP--WTYQIDYFGLAATVH 894 (974)
T ss_pred cccCCcceeEeecccCCCCcccceEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCC--CchhhhhHHHHHHHH
Confidence 9999999999942 2458999999997653 444566778999999999998887 889999999999999
Q ss_pred HHHhCCC
Q 003504 730 ELITGKK 736 (815)
Q Consensus 730 el~tg~~ 736 (815)
-|+.|+.
T Consensus 895 ~mLFG~y 901 (974)
T KOG1166|consen 895 VMLFGKY 901 (974)
T ss_pred HHHHHHH
Confidence 9999874
No 445
>smart00090 RIO RIO-like kinase.
Probab=99.71 E-value=5.3e-17 Score=164.75 Aligned_cols=143 Identities=13% Similarity=0.154 Sum_probs=109.8
Q ss_pred cCCCCCCeecccCCeeeEEEE--cCCCcEEEEEEeecCCcc------------------------cHHHHHHHHHHhcCC
Q 003504 508 SNFDRGTLLAEGKFGPVYRGF--LPGGIHVAVKVLVHGSTL------------------------TDQEAARELEYLGRI 561 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~--~~~~~~vavK~l~~~~~~------------------------~~~~~~~E~~~l~~l 561 (815)
..|.+.+.||+|+||.||+|. ..+|+.||||+++..... ....+.+|+..+.++
T Consensus 28 ~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L 107 (237)
T smart00090 28 ILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRL 107 (237)
T ss_pred chHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 357788999999999999998 678999999998753210 012356899999999
Q ss_pred CCCC--ceeeeeEEEeCCeeEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHH
Q 003504 562 KHPN--LVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKI 639 (815)
Q Consensus 562 ~H~n--iv~l~g~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 639 (815)
.+.. +.+++++ ...++||||+++++|...... ...........+
T Consensus 108 ~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~------------------------------~~~~~~~~~~~i 153 (237)
T smart00090 108 YEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLK------------------------------DVEPEEEEEFEL 153 (237)
T ss_pred HhcCCCCCeeeEe----cCceEEEEEecCCcccccccc------------------------------cCCcchHHHHHH
Confidence 7533 3444442 235899999999888765422 112333455789
Q ss_pred HHHHHHHHHHHhcCCCCC-eeeccCCCCceEEcCCCCeeecccccceecC
Q 003504 640 ALGTARALAFLHHGCSPP-IIHRDIKASSVYLDMNLEPRLSDFGLAKIFG 688 (815)
Q Consensus 640 ~~~ia~~L~yLH~~~~~~-ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~ 688 (815)
+.|++.+++||| ..+ ++||||||+||+++ ++.++|+|||.+....
T Consensus 154 ~~qi~~~l~~LH---~~g~iiH~Dikp~NIli~-~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 154 YDDILEEMRKLY---KEGELVHGDLSEYNILVH-DGKVVIIDVSQSVELD 199 (237)
T ss_pred HHHHHHHHHHHH---hcCCEEeCCCChhhEEEE-CCCEEEEEChhhhccC
Confidence 999999999999 788 99999999999999 8899999999987554
No 446
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.70 E-value=1.2e-16 Score=158.96 Aligned_cols=145 Identities=17% Similarity=0.154 Sum_probs=112.0
Q ss_pred HHHHHhcCCCCCCeecccCCeeeEEEEcCCCcEEEEEEeecCCcc----------------------cHHHHHHHHHHhc
Q 003504 502 DLLSATSNFDRGTLLAEGKFGPVYRGFLPGGIHVAVKVLVHGSTL----------------------TDQEAARELEYLG 559 (815)
Q Consensus 502 ~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~l~~~~~~----------------------~~~~~~~E~~~l~ 559 (815)
++......|...+.||+|+||.||+|...+|+.||||+++..... ....+.+|+.++.
T Consensus 9 ~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 88 (198)
T cd05144 9 TLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALK 88 (198)
T ss_pred HHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHH
Confidence 344444447788999999999999999888999999987643210 0123567899999
Q ss_pred CCCCCC--ceeeeeEEEeCCeeEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHH
Q 003504 560 RIKHPN--LVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRH 637 (815)
Q Consensus 560 ~l~H~n--iv~l~g~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (815)
.+.|++ +.+.++ ....++||||+++++|...... ....
T Consensus 89 ~l~~~~i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~------------------------------------~~~~ 128 (198)
T cd05144 89 ALYEEGFPVPKPID----WNRHAVVMEYIDGVELYRVRVL------------------------------------EDPE 128 (198)
T ss_pred HHHHcCCCCCceee----cCCceEEEEEeCCcchhhcccc------------------------------------ccHH
Confidence 988774 444443 2456899999999998765420 1134
Q ss_pred HHHHHHHHHHHHHhcCCCCCeeeccCCCCceEEcCCCCeeecccccceecCC
Q 003504 638 KIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGN 689 (815)
Q Consensus 638 ~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~ 689 (815)
+++.+++.++.++| ..+|+||||||+||++++++.++|+|||.+.....
T Consensus 129 ~~~~~i~~~l~~lh---~~gi~H~Dl~p~Nill~~~~~~~liDfg~~~~~~~ 177 (198)
T cd05144 129 EVLDEILEEIVKAY---KHGIIHGDLSEFNILVDDDEKIYIIDWPQMVSTDH 177 (198)
T ss_pred HHHHHHHHHHHHHH---HCCCCcCCCCcccEEEcCCCcEEEEECCccccCCC
Confidence 68889999999999 79999999999999999999999999999976543
No 447
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.69 E-value=1.2e-16 Score=160.90 Aligned_cols=134 Identities=24% Similarity=0.354 Sum_probs=112.9
Q ss_pred CeecccCCeeeEEEEcCCCcEEEEEEeecCCccc--------HHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEe
Q 003504 514 TLLAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLT--------DQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDY 585 (815)
Q Consensus 514 ~~ig~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~--------~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 585 (815)
+.||+|++|.||+|.. .|..|+||......... ...+.+|++++..++|+++.....++......++||||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 5799999999999987 56789999865432211 23577899999999999998888787777888999999
Q ss_pred CCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCC
Q 003504 586 MENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKA 665 (815)
Q Consensus 586 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~ 665 (815)
+++++|.+++... .+ .+..++.+++.+|.++| ..+++|||++|
T Consensus 81 ~~G~~L~~~~~~~---------------------------------~~-~~~~i~~~i~~~l~~lH---~~~i~H~Dl~p 123 (211)
T PRK14879 81 IEGEPLKDLINSN---------------------------------GM-EELELSREIGRLVGKLH---SAGIIHGDLTT 123 (211)
T ss_pred eCCcCHHHHHHhc---------------------------------cH-HHHHHHHHHHHHHHHHH---hCCcccCCCCc
Confidence 9999999988541 11 67889999999999999 89999999999
Q ss_pred CceEEcCCCCeeeccccccee
Q 003504 666 SSVYLDMNLEPRLSDFGLAKI 686 (815)
Q Consensus 666 ~NIll~~~~~~kl~Dfgla~~ 686 (815)
.||+++ ++.++|+|||.++.
T Consensus 124 ~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 124 SNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred ccEEEE-CCCEEEEECCcccC
Confidence 999999 78899999998864
No 448
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.67 E-value=3.3e-17 Score=185.13 Aligned_cols=206 Identities=27% Similarity=0.346 Sum_probs=145.8
Q ss_pred hcCCCCCCeecccCCeeeEEEEcC-CCcEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEe
Q 003504 507 TSNFDRGTLLAEGKFGPVYRGFLP-GGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDY 585 (815)
Q Consensus 507 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 585 (815)
..+|+..+.|..|+||.||.+.+. ..+++|+|+ ++. ..+.|- ++.....|.+|
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~ki-Nkq-----~lilRn--ilt~a~npfvv------------------ 135 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKI-NKQ-----NLILRN--ILTFAGNPFVV------------------ 135 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhcc-ccc-----chhhhc--cccccCCccee------------------
Confidence 357888999999999999999865 356788853 321 111111 22222333333
Q ss_pred CCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCC
Q 003504 586 MENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKA 665 (815)
Q Consensus 586 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~ 665 (815)
|+-...+.... ..+. +++.+++|+| ..+|||||+||
T Consensus 136 ---gDc~tllk~~g----------------------------~lPv----------dmvla~Eylh---~ygivhrdlkp 171 (1205)
T KOG0606|consen 136 ---GDCATLLKNIG----------------------------PLPV----------DMVLAVEYLH---SYGIVHRDLKP 171 (1205)
T ss_pred ---chhhhhcccCC----------------------------CCcc----------hhhHHhHhhc---cCCeecCCCCC
Confidence 34344443210 1111 2378899999 89999999999
Q ss_pred CceEEcCCCCeeecccccceecCC----------------CCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHH
Q 003504 666 SSVYLDMNLEPRLSDFGLAKIFGN----------------GLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLL 729 (815)
Q Consensus 666 ~NIll~~~~~~kl~Dfgla~~~~~----------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~ 729 (815)
+|.+|+.-|.+|+.|||+++.-.. .......+||+.|+|||++.... |+..+|+|++|+++|
T Consensus 172 dnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqg--ygkpvdwwamGiIly 249 (1205)
T KOG0606|consen 172 DNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQG--YGKPVDWWAMGIILY 249 (1205)
T ss_pred CcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhc--cCCCccHHHHHHHHH
Confidence 999999999999999999875210 11334567999999999998776 789999999999999
Q ss_pred HHHhCCCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCC
Q 003504 730 ELITGKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRP 799 (815)
Q Consensus 730 el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP 799 (815)
|.+.|..||.++.+++.-+.++.....+. +..+..+.+..+++...++.+|.+|-
T Consensus 250 eFLVgcvpffGdtpeelfg~visd~i~wp---------------E~dea~p~Ea~dli~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 250 EFLVGCVPFFGDTPEELFGQVISDDIEWP---------------EEDEALPPEAQDLIEQLLRQNPLCRL 304 (1205)
T ss_pred HHheeeeeccCCCHHHHHhhhhhhhcccc---------------ccCcCCCHHHHHHHHHHHHhChHhhc
Confidence 99999999999888876555543221111 11233445788999999999999997
No 449
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.67 E-value=2e-16 Score=181.28 Aligned_cols=136 Identities=20% Similarity=0.309 Sum_probs=110.7
Q ss_pred cCCCCCCeecccCCeeeEEEEcCCCcEEEEEEee-cCCc-------ccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCee
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFLPGGIHVAVKVLV-HGST-------LTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQR 579 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~l~-~~~~-------~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 579 (815)
..|...+.||+|+||.||+|.+.+.. +++|+.. +... ...+.+.+|++++.+++|++++....++......
T Consensus 333 ~~~~~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~ 411 (535)
T PRK09605 333 RRKIPDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEK 411 (535)
T ss_pred cccCccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCC
Confidence 34456789999999999999876544 4444322 1111 1124678999999999999999888888887788
Q ss_pred EEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCee
Q 003504 580 IAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPII 659 (815)
Q Consensus 580 ~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~iv 659 (815)
++||||+++++|.+++.. +..++.+++++|.||| +.+++
T Consensus 412 ~lv~E~~~g~~L~~~l~~--------------------------------------~~~~~~~i~~~L~~lH---~~gii 450 (535)
T PRK09605 412 TIVMEYIGGKDLKDVLEG--------------------------------------NPELVRKVGEIVAKLH---KAGIV 450 (535)
T ss_pred EEEEEecCCCcHHHHHHH--------------------------------------HHHHHHHHHHHHHHHH---hCCCc
Confidence 999999999999988742 3578999999999999 89999
Q ss_pred eccCCCCceEEcCCCCeeeccccccee
Q 003504 660 HRDIKASSVYLDMNLEPRLSDFGLAKI 686 (815)
Q Consensus 660 HrDlk~~NIll~~~~~~kl~Dfgla~~ 686 (815)
|||+||+|||+ +++.++|+|||+++.
T Consensus 451 HrDlkp~NILl-~~~~~~liDFGla~~ 476 (535)
T PRK09605 451 HGDLTTSNFIV-RDDRLYLIDFGLGKY 476 (535)
T ss_pred cCCCChHHEEE-ECCcEEEEeCccccc
Confidence 99999999999 577999999999875
No 450
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.66 E-value=3.1e-16 Score=156.31 Aligned_cols=130 Identities=23% Similarity=0.353 Sum_probs=106.6
Q ss_pred eecccCCeeeEEEEcCCCcEEEEEEeecCCcc--------cHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeC
Q 003504 515 LLAEGKFGPVYRGFLPGGIHVAVKVLVHGSTL--------TDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYM 586 (815)
Q Consensus 515 ~ig~G~~g~Vy~~~~~~~~~vavK~l~~~~~~--------~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 586 (815)
.||+|+||.||+|.+ ++..|++|........ ....+.+|++++..++|+++.....++...+..++||||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 489999999999996 4678999986542211 1245678999999999887766666666777789999999
Q ss_pred CCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCC
Q 003504 587 ENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKAS 666 (815)
Q Consensus 587 ~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~ 666 (815)
++++|.+++... .. .++.+++.+|.+|| +.+++|||++|.
T Consensus 80 ~g~~l~~~~~~~------------------------------~~-------~~~~~i~~~l~~lH---~~gi~H~Dl~~~ 119 (199)
T TIGR03724 80 EGKPLKDVIEEG------------------------------ND-------ELLREIGRLVGKLH---KAGIVHGDLTTS 119 (199)
T ss_pred CCccHHHHHhhc------------------------------HH-------HHHHHHHHHHHHHH---HCCeecCCCCcc
Confidence 999999887531 00 68999999999999 899999999999
Q ss_pred ceEEcCCCCeeeccccccee
Q 003504 667 SVYLDMNLEPRLSDFGLAKI 686 (815)
Q Consensus 667 NIll~~~~~~kl~Dfgla~~ 686 (815)
||+++ ++.+++.|||+++.
T Consensus 120 Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 120 NIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred eEEEE-CCcEEEEECCCCcC
Confidence 99999 78999999998865
No 451
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.63 E-value=1.7e-16 Score=168.17 Aligned_cols=172 Identities=21% Similarity=0.293 Sum_probs=128.6
Q ss_pred eeEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCC
Q 003504 578 QRIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPP 657 (815)
Q Consensus 578 ~~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ 657 (815)
..++.|++|...+|.+||...+ .....+|...+.++.|++.|++| ++
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~---------------------------~~e~~s~s~~~~~~~q~~~~~~y------k~ 376 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRR---------------------------TGEERSLSLMLDIFKQIAPAVEY------KG 376 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCC---------------------------cccccchhHHHHHHHhhccchhh------cc
Confidence 4678999999999999997542 23456788889999999999999 57
Q ss_pred eeeccCCCCceEEcCCCCeeecccccceecCCCC-------ccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHH
Q 003504 658 IIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGL-------DEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLE 730 (815)
Q Consensus 658 ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~e 730 (815)
.+|||+||.||+...+.++||+|||+........ ......||..||+||.+.+.. |+.|+||||+|++++|
T Consensus 377 ~ihrdlkp~nif~~~d~q~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~--y~~kvdIyaLGlil~E 454 (516)
T KOG1033|consen 377 LIHRDLKPSNIFFSDDDQLKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQ--YSEKVDIYALGLILAE 454 (516)
T ss_pred chhhhccccccccccchhhhhhhhhheeecccCCcccchhhhhhhcccccccCCHHHHhhhh--hhhhcchhhHHHHHHH
Confidence 8999999999999999999999999998776444 344556999999999999887 8999999999999999
Q ss_pred HHh-CCCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHH
Q 003504 731 LIT-GKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQI 804 (815)
Q Consensus 731 l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v 804 (815)
++. -..++.. . ....+.....++|......|. -..+...++.+.|.+||++.++
T Consensus 455 L~~~f~T~~er------~---------~t~~d~r~g~ip~~~~~d~p~-----e~~ll~~lls~~p~~RP~~~~~ 509 (516)
T KOG1033|consen 455 LLIQFSTQFER------I---------ATLTDIRDGIIPPEFLQDYPE-----EYTLLQQLLSPSPEERPSAIEV 509 (516)
T ss_pred HHHHhccHHHH------H---------HhhhhhhcCCCChHHhhcCcH-----HHHHHHHhcCCCcccCchHHHH
Confidence 998 2222210 0 000111122333333333222 3577888999999999954443
No 452
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.57 E-value=1.1e-14 Score=143.59 Aligned_cols=136 Identities=18% Similarity=0.239 Sum_probs=97.4
Q ss_pred CCeecccCCeeeEEEEcCCCcEEEEEEeecCCcccH--HH----------------------HHHHHHHhcCCCCCC--c
Q 003504 513 GTLLAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTD--QE----------------------AARELEYLGRIKHPN--L 566 (815)
Q Consensus 513 ~~~ig~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~--~~----------------------~~~E~~~l~~l~H~n--i 566 (815)
.+.||+|+||.||+|...+++.||||+++....... .. ...|...+.++.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 478999999999999988899999999875322111 11 134555555554332 3
Q ss_pred eeeeeEEEeCCeeEEEEEeCCCCChhhh-hccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHH
Q 003504 567 VPLTGYCIAGDQRIAIYDYMENGNLQNL-LHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTAR 645 (815)
Q Consensus 567 v~l~g~~~~~~~~~lv~ey~~~gsL~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~ 645 (815)
.+.+++ ...++||||+++|++... +... . .. .....++.+++.
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~-----------------------------~--~~-~~~~~~~~~~~~ 125 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDV-----------------------------R--LL-EDPEELYDQILE 125 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhh-----------------------------h--hc-ccHHHHHHHHHH
Confidence 444432 246899999999654321 1110 0 00 345688999999
Q ss_pred HHHHHhcCCC-CCeeeccCCCCceEEcCCCCeeecccccceecC
Q 003504 646 ALAFLHHGCS-PPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFG 688 (815)
Q Consensus 646 ~L~yLH~~~~-~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~ 688 (815)
++.++| . .+|+||||||+||+++ ++.++++|||.+....
T Consensus 126 ~l~~lh---~~~~ivH~Dl~p~Nili~-~~~~~liDfg~a~~~~ 165 (187)
T cd05119 126 LMRKLY---REAGLVHGDLSEYNILVD-DGKVYIIDVPQAVEID 165 (187)
T ss_pred HHHHHh---hccCcCcCCCChhhEEEE-CCcEEEEECccccccc
Confidence 999999 6 8999999999999999 8899999999997554
No 453
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.55 E-value=4.4e-14 Score=143.76 Aligned_cols=136 Identities=17% Similarity=0.221 Sum_probs=104.9
Q ss_pred CCeec-ccCCeeeEEEEcCCCcEEEEEEeecCCc-------------ccHHHHHHHHHHhcCCCCCCc--eeeeeEEEeC
Q 003504 513 GTLLA-EGKFGPVYRGFLPGGIHVAVKVLVHGST-------------LTDQEAARELEYLGRIKHPNL--VPLTGYCIAG 576 (815)
Q Consensus 513 ~~~ig-~G~~g~Vy~~~~~~~~~vavK~l~~~~~-------------~~~~~~~~E~~~l~~l~H~ni--v~l~g~~~~~ 576 (815)
...|| .|+.|+||.+... +..+|||.+..... .....+.+|++++.+++|+++ ++.+++....
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 46788 8999999999886 66899998854211 223457889999999998875 6777765442
Q ss_pred C----eeEEEEEeCCC-CChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHh
Q 003504 577 D----QRIAIYDYMEN-GNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLH 651 (815)
Q Consensus 577 ~----~~~lv~ey~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH 651 (815)
. ..++|+||+++ .+|.+++... .++. ..+.+++.++.+||
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~~-------------------------------~l~~----~~~~~i~~~l~~lH 159 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQEA-------------------------------PLSE----EQWQAIGQLIARFH 159 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhcC-------------------------------CCCH----HHHHHHHHHHHHHH
Confidence 2 23599999997 6898887531 1121 23567999999999
Q ss_pred cCCCCCeeeccCCCCceEEcCCCCeeecccccceec
Q 003504 652 HGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIF 687 (815)
Q Consensus 652 ~~~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~ 687 (815)
..+|+||||||.|||++.++.++|+|||.+...
T Consensus 160 ---~~GI~HrDlkp~NILv~~~~~v~LIDfg~~~~~ 192 (239)
T PRK01723 160 ---DAGVYHADLNAHNILLDPDGKFWLIDFDRGELR 192 (239)
T ss_pred ---HCCCCCCCCCchhEEEcCCCCEEEEECCCcccC
Confidence 899999999999999999899999999988753
No 454
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.54 E-value=3.4e-14 Score=134.70 Aligned_cols=135 Identities=17% Similarity=0.129 Sum_probs=112.5
Q ss_pred CCCeecccCCeeeEEEEcCCCcEEEEEEeecCCcccHHHHHHHHHHhcCCCC--CCceeeeeEEEeCCeeEEEEEeCCCC
Q 003504 512 RGTLLAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKH--PNLVPLTGYCIAGDQRIAIYDYMENG 589 (815)
Q Consensus 512 ~~~~ig~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H--~niv~l~g~~~~~~~~~lv~ey~~~g 589 (815)
+.+.||+|.++.||++...+ ..++||....... ...+.+|+.++..++| .++.+++++....+..++++||++++
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~ 78 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGE 78 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCe
Confidence 35789999999999999865 7899998865332 5678999999999976 58999999888878899999999987
Q ss_pred ChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCceE
Q 003504 590 NLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVY 669 (815)
Q Consensus 590 sL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NIl 669 (815)
.+..+ ++..+..++.+++++++++|.....+++|||++|+||+
T Consensus 79 ~~~~~-------------------------------------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil 121 (155)
T cd05120 79 TLDEV-------------------------------------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNIL 121 (155)
T ss_pred ecccC-------------------------------------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEE
Confidence 66432 34456778999999999999544468999999999999
Q ss_pred EcCCCCeeeccccccee
Q 003504 670 LDMNLEPRLSDFGLAKI 686 (815)
Q Consensus 670 l~~~~~~kl~Dfgla~~ 686 (815)
++..+.+++.|||.++.
T Consensus 122 ~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 122 VDDGKILGIIDWEYAGY 138 (155)
T ss_pred EECCcEEEEEecccccC
Confidence 99989999999998864
No 455
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.51 E-value=5.4e-16 Score=164.11 Aligned_cols=212 Identities=29% Similarity=0.383 Sum_probs=145.6
Q ss_pred EEECcCCCCCCCCcccCC--CCCCCEEEccCCcCCccCCccccCCCCCcEEEccCCcCCCCChhhhcCCcCCCEEEcCCC
Q 003504 57 SLDLSENNITALPSDLWS--LGSLKSLNLSYNRISGSLPSNIGNFGLLEVFDLSNNNFSGEIPAAISSLVSLRVLKLDGN 134 (815)
Q Consensus 57 ~L~Ls~n~l~~lp~~~~~--l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 134 (815)
.|.|++-+++.+|-..++ +..-...+|+.|++. .+|..+..+..|+.|.|..|.|. .+|..++++..|++|+|+.|
T Consensus 54 ~l~Ls~rrlk~fpr~a~~~~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~N 131 (722)
T KOG0532|consen 54 RLLLSGRRLKEFPRGAASYDLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSN 131 (722)
T ss_pred ccccccchhhcCCCccccccccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccc
Confidence 477777788887765554 666667788888887 67777777777777777777777 66777777777777777777
Q ss_pred cccccCCcccccccccceeeccCCcCCCCCCchhhccCCCCCEEEcCCCcccCCCCCCCCCCCCCeEeccCCcCCCcchh
Q 003504 135 MFQWSIPPGLLNCQSLVTVDLSMNQLNGSLPDGFGAAFPKLKSLNLAGNEIKGRDTHFAGLKSITNLNISGNLFQGSVMG 214 (815)
Q Consensus 135 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 214 (815)
+++ ..|..+..|+ |+.|-+++|+++ .+|+.++ .+..|..|+.+.|.|..++..+.++.+|+.|++..|.+..+|..
T Consensus 132 qlS-~lp~~lC~lp-Lkvli~sNNkl~-~lp~~ig-~~~tl~~ld~s~nei~slpsql~~l~slr~l~vrRn~l~~lp~E 207 (722)
T KOG0532|consen 132 QLS-HLPDGLCDLP-LKVLIVSNNKLT-SLPEEIG-LLPTLAHLDVSKNEIQSLPSQLGYLTSLRDLNVRRNHLEDLPEE 207 (722)
T ss_pred hhh-cCChhhhcCc-ceeEEEecCccc-cCCcccc-cchhHHHhhhhhhhhhhchHHhhhHHHHHHHHHhhhhhhhCCHH
Confidence 777 5666666543 777777777776 7777775 56777777777777777777777777777777777777666554
Q ss_pred hhhcccceeeeccccccCcccccccccccCCccceEEEcCCCccCcchhhccccCCCCCEEEecCCcCcCCCccccc---
Q 003504 215 VFLESLEVIDLRSNQFQGHISQVQFNSSYNWSRLVYVDLSENQLSGEIFHNFSQAQNLKHLSLAYNRFTRQEFPQIG--- 291 (815)
Q Consensus 215 ~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~--- 291 (815)
... -.|..||+|+|++. .+|-.|..|..|++|-|.+|.+..-+ ..+.
T Consensus 208 l~~----------------------------LpLi~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLqSPP-AqIC~kG 257 (722)
T KOG0532|consen 208 LCS----------------------------LPLIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQSPP-AQICEKG 257 (722)
T ss_pred HhC----------------------------CceeeeecccCcee-ecchhhhhhhhheeeeeccCCCCCCh-HHHHhcc
Confidence 321 23666666777766 56777777888888888888776532 3332
Q ss_pred cccCCCeEecCCC
Q 003504 292 TLLGLEHLNLSRT 304 (815)
Q Consensus 292 ~l~~L~~L~Ls~N 304 (815)
...=.++|+..-+
T Consensus 258 kVHIFKyL~~qA~ 270 (722)
T KOG0532|consen 258 KVHIFKYLSTQAC 270 (722)
T ss_pred ceeeeeeecchhc
Confidence 2223445555444
No 456
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.45 E-value=1.9e-13 Score=151.62 Aligned_cols=197 Identities=30% Similarity=0.438 Sum_probs=124.5
Q ss_pred EEEccCCcCCCCChhhhcCCcCCCEEEcCCCcccccCCccccccc-ccceeeccCCcCCCCCCchhhccCCCCCEEEcCC
Q 003504 104 VFDLSNNNFSGEIPAAISSLVSLRVLKLDGNMFQWSIPPGLLNCQ-SLVTVDLSMNQLNGSLPDGFGAAFPKLKSLNLAG 182 (815)
Q Consensus 104 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~L~~ 182 (815)
.|+++.|.+. .....+..++.++.|++.+|.++ .+++....++ +|+.|++++|++. .+|..+ ..+++|+.|++++
T Consensus 97 ~l~~~~~~~~-~~~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~-~~l~~L~~L~l~~ 172 (394)
T COG4886 97 SLDLNLNRLR-SNISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPL-RNLPNLKNLDLSF 172 (394)
T ss_pred eeeccccccc-cCchhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhh-hccccccccccCC
Confidence 5777777764 23345556677777777777777 4555555553 7777777777776 665443 3467777777777
Q ss_pred CcccCCCCCCCCCCCCCeEeccCCcCCCcchhh-hhcccceeeeccccccCcccccccccccCCccceEEEcCCCccCcc
Q 003504 183 NEIKGRDTHFAGLKSITNLNISGNLFQGSVMGV-FLESLEVIDLRSNQFQGHISQVQFNSSYNWSRLVYVDLSENQLSGE 261 (815)
Q Consensus 183 N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 261 (815)
|+++.++.....+++|+.|++++|+++.++... .+..|++|.+++|.+...+ ....++.++..+.+.+|++..
T Consensus 173 N~l~~l~~~~~~~~~L~~L~ls~N~i~~l~~~~~~~~~L~~l~~~~N~~~~~~-----~~~~~~~~l~~l~l~~n~~~~- 246 (394)
T COG4886 173 NDLSDLPKLLSNLSNLNNLDLSGNKISDLPPEIELLSALEELDLSNNSIIELL-----SSLSNLKNLSGLELSNNKLED- 246 (394)
T ss_pred chhhhhhhhhhhhhhhhheeccCCccccCchhhhhhhhhhhhhhcCCcceecc-----hhhhhcccccccccCCceeee-
Confidence 777777766667777788888888887777764 4555777777777422111 123345556666666666653
Q ss_pred hhhccccCCCCCEEEecCCcCcCCCccccccccCCCeEecCCCcCcCCCch
Q 003504 262 IFHNFSQAQNLKHLSLAYNRFTRQEFPQIGTLLGLEHLNLSRTSLIGDIPS 312 (815)
Q Consensus 262 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 312 (815)
.+..++.+++|+.|++++|.++.++. ++.+.+|+.|++++|.+....|.
T Consensus 247 ~~~~~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~~~~ 295 (394)
T COG4886 247 LPESIGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNALPL 295 (394)
T ss_pred ccchhccccccceecccccccccccc--ccccCccCEEeccCccccccchh
Confidence 24455566666666666666665543 55666666666666666544443
No 457
>PLN03150 hypothetical protein; Provisional
Probab=99.45 E-value=2.5e-13 Score=157.45 Aligned_cols=106 Identities=35% Similarity=0.572 Sum_probs=70.4
Q ss_pred CEEECcCCCCC-CCCcccCCCCCCCEEEccCCcCCccCCccccCCCCCcEEEccCCcCCCCChhhhcCCcCCCEEEcCCC
Q 003504 56 QSLDLSENNIT-ALPSDLWSLGSLKSLNLSYNRISGSLPSNIGNFGLLEVFDLSNNNFSGEIPAAISSLVSLRVLKLDGN 134 (815)
Q Consensus 56 ~~L~Ls~n~l~-~lp~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 134 (815)
+.|+|++|.++ .+|..+..+++|+.|+|++|+|.+.+|..|+++++|+.|+|++|+|++.+|..+++|++|+.|+|++|
T Consensus 421 ~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N 500 (623)
T PLN03150 421 DGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGN 500 (623)
T ss_pred EEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCC
Confidence 44455555554 34455555666666666666666667767777777777777777777777777777777777777777
Q ss_pred cccccCCcccccc-cccceeeccCCcCC
Q 003504 135 MFQWSIPPGLLNC-QSLVTVDLSMNQLN 161 (815)
Q Consensus 135 ~l~~~~~~~~~~l-~~L~~L~l~~N~l~ 161 (815)
++++.+|..+..+ .++..+++.+|...
T Consensus 501 ~l~g~iP~~l~~~~~~~~~l~~~~N~~l 528 (623)
T PLN03150 501 SLSGRVPAALGGRLLHRASFNFTDNAGL 528 (623)
T ss_pred cccccCChHHhhccccCceEEecCCccc
Confidence 7777777766543 45667777777654
No 458
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.45 E-value=1.9e-14 Score=164.08 Aligned_cols=252 Identities=21% Similarity=0.278 Sum_probs=182.7
Q ss_pred CCCCCCeecccCCeeeEEEEcCC--CcEEEEEEeecCC--cccHHHHHHHHHHhcCCC-CCCceeeeeEEEeCCeeEEEE
Q 003504 509 NFDRGTLLAEGKFGPVYRGFLPG--GIHVAVKVLVHGS--TLTDQEAARELEYLGRIK-HPNLVPLTGYCIAGDQRIAIY 583 (815)
Q Consensus 509 ~~~~~~~ig~G~~g~Vy~~~~~~--~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lv~ 583 (815)
.|...+.||+|+|+.|-...... ...+|+|.+.... .........|..+-..+. |+|++.+++.....+..+++.
T Consensus 21 ~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~ 100 (601)
T KOG0590|consen 21 QYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSL 100 (601)
T ss_pred cccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccccc
Confidence 46667789999999998887533 4456777665432 222334455777777776 999999999999999999999
Q ss_pred EeCCCCChhhhh-ccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecc
Q 003504 584 DYMENGNLQNLL-HDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRD 662 (815)
Q Consensus 584 ey~~~gsL~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrD 662 (815)
+|.++|++.+-+ +.. ....+-........|+..++.|+|. ..++.|||
T Consensus 101 ~~s~g~~~f~~i~~~~-----------------------------~~~~~~~~~~~~~~ql~s~l~~~H~--~~~~~h~~ 149 (601)
T KOG0590|consen 101 SYSDGGSLFSKISHPD-----------------------------STGTSSSSASRYLPQLNSGLSYLHP--ENGVTHRD 149 (601)
T ss_pred CcccccccccccccCC-----------------------------ccCCCCcchhhhhhhhccCccccCc--ccccccCC
Confidence 999999998887 321 0011122234577889999999995 57899999
Q ss_pred CCCCceEEcCCC-CeeecccccceecCC-CC---ccccccc-cccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCC
Q 003504 663 IKASSVYLDMNL-EPRLSDFGLAKIFGN-GL---DEEIARG-SPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKK 736 (815)
Q Consensus 663 lk~~NIll~~~~-~~kl~Dfgla~~~~~-~~---~~~~~~g-t~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~ 736 (815)
+||+|.+++..+ ..|++|||+|..+.. .. .....+| ++.|+|||...+.. +..+..|+||.|+++.-+++|..
T Consensus 150 ikP~n~~l~~s~~~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~-~~~~~~d~~S~g~~l~~~~~g~~ 228 (601)
T KOG0590|consen 150 IKPSNSLLDESGSALKIADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKA-YRGPSVDVWSLGIVLSAMLTGEL 228 (601)
T ss_pred CCCccchhccCCCcccCCCchhhccccccCCcceeeecccCCCCCCCCcccccchh-hcCCCcccccccccccccccCCC
Confidence 999999999999 999999999987765 22 2334568 99999999987743 25788999999999999999999
Q ss_pred CCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHH
Q 003504 737 PLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIV 805 (815)
Q Consensus 737 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~ 805 (815)
|+....... .....|.... ................++..+++..+|+.|.+.+++.
T Consensus 229 p~~~~~~~~--~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~ 284 (601)
T KOG0590|consen 229 PWDFPSRKD--GRYSSWKSNK-----------GRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELK 284 (601)
T ss_pred Ccccccccc--ccceeecccc-----------cccccCccccCChhhhhcccccccCCchhcccccccc
Confidence 987643322 2222222110 0111122344455677888899999999999887764
No 459
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.45 E-value=1.1e-13 Score=153.66 Aligned_cols=197 Identities=31% Similarity=0.407 Sum_probs=109.6
Q ss_pred EEEccCCcCCccCCccccCCCCCcEEEccCCcCCCCChhhhcCCc-CCCEEEcCCCcccccCCcccccccccceeeccCC
Q 003504 80 SLNLSYNRISGSLPSNIGNFGLLEVFDLSNNNFSGEIPAAISSLV-SLRVLKLDGNMFQWSIPPGLLNCQSLVTVDLSMN 158 (815)
Q Consensus 80 ~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N 158 (815)
.|.+..|.+. .....+..++.++.|++.+|.++ .+|.....+. +|+.|++++|++. .+|..+..+++|+.|++++|
T Consensus 97 ~l~~~~~~~~-~~~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLR-SNISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeeccccccc-cCchhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 4555555553 22233444455556666666655 3334444443 5666666666655 34444555566666666666
Q ss_pred cCCCCCCchhhccCCCCCEEEcCCCcccCCCCCCCCCCCCCeEeccCCcCCCcch-hhhhcccceeeeccccccCccccc
Q 003504 159 QLNGSLPDGFGAAFPKLKSLNLAGNEIKGRDTHFAGLKSITNLNISGNLFQGSVM-GVFLESLEVIDLRSNQFQGHISQV 237 (815)
Q Consensus 159 ~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~ 237 (815)
+++ .+|.... .+++|+.|++++|+++.++.....+..|++|.+++|.+..++. ..-+.++..|.+.+|++...+
T Consensus 174 ~l~-~l~~~~~-~~~~L~~L~ls~N~i~~l~~~~~~~~~L~~l~~~~N~~~~~~~~~~~~~~l~~l~l~~n~~~~~~--- 248 (394)
T COG4886 174 DLS-DLPKLLS-NLSNLNNLDLSGNKISDLPPEIELLSALEELDLSNNSIIELLSSLSNLKNLSGLELSNNKLEDLP--- 248 (394)
T ss_pred hhh-hhhhhhh-hhhhhhheeccCCccccCchhhhhhhhhhhhhhcCCcceecchhhhhcccccccccCCceeeecc---
Confidence 665 5554431 2455666666666666555544445556666666663322222 222555566666666654221
Q ss_pred ccccccCCccceEEEcCCCccCcchhhccccCCCCCEEEecCCcCcCCCcc
Q 003504 238 QFNSSYNWSRLVYVDLSENQLSGEIFHNFSQAQNLKHLSLAYNRFTRQEFP 288 (815)
Q Consensus 238 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 288 (815)
....+++.+++|++++|.++.... ++.+.+|+.|++++|.+....+.
T Consensus 249 --~~~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~~~~ 295 (394)
T COG4886 249 --ESIGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNALPL 295 (394)
T ss_pred --chhccccccceecccccccccccc--ccccCccCEEeccCccccccchh
Confidence 223455667888888888775433 77778888888888887665533
No 460
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.44 E-value=3.9e-15 Score=157.73 Aligned_cols=180 Identities=29% Similarity=0.447 Sum_probs=141.7
Q ss_pred CCCCCCEEECcCCCCCCCCcccCCCCCCCEEEccCCcCCccCCccccCCCCCcEEEccCCcCCCCChhhhcCCcCCCEEE
Q 003504 51 KLSKLQSLDLSENNITALPSDLWSLGSLKSLNLSYNRISGSLPSNIGNFGLLEVFDLSNNNFSGEIPAAISSLVSLRVLK 130 (815)
Q Consensus 51 ~l~~L~~L~Ls~n~l~~lp~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 130 (815)
.+..-...||+.|++.++|.....+..|..|.|.+|.|. .+|..+.++..|+.|||+.|+++ .+|..++.|+ |+.|-
T Consensus 73 ~ltdt~~aDlsrNR~~elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli 149 (722)
T KOG0532|consen 73 DLTDTVFADLSRNRFSELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLI 149 (722)
T ss_pred cccchhhhhccccccccCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEE
Confidence 355556788888888888888888888888888888887 78888888888888888888888 6677777765 88888
Q ss_pred cCCCcccccCCcccccccccceeeccCCcCCCCCCchhhccCCCCCEEEcCCCcccCCCCCCCCCCCCCeEeccCCcCCC
Q 003504 131 LDGNMFQWSIPPGLLNCQSLVTVDLSMNQLNGSLPDGFGAAFPKLKSLNLAGNEIKGRDTHFAGLKSITNLNISGNLFQG 210 (815)
Q Consensus 131 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~ 210 (815)
+++|+++ .+|+.++.+..|..||.+.|.|. .+|..+. ++.+|+.|.+..|++..+|..+..| .|..||+|.|++..
T Consensus 150 ~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~-~l~slr~l~vrRn~l~~lp~El~~L-pLi~lDfScNkis~ 225 (722)
T KOG0532|consen 150 VSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLG-YLTSLRDLNVRRNHLEDLPEELCSL-PLIRLDFSCNKISY 225 (722)
T ss_pred EecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhh-hHHHHHHHHHhhhhhhhCCHHHhCC-ceeeeecccCceee
Confidence 8888888 67888888888888888888887 7887774 4788888888888888888777744 57778888888888
Q ss_pred cchhhh-hcccceeeeccccccCccccc
Q 003504 211 SVMGVF-LESLEVIDLRSNQFQGHISQV 237 (815)
Q Consensus 211 ~~~~~~-l~~L~~L~L~~N~l~~~~~~~ 237 (815)
+|...- |..|++|-|.+|.++..+.++
T Consensus 226 iPv~fr~m~~Lq~l~LenNPLqSPPAqI 253 (722)
T KOG0532|consen 226 LPVDFRKMRHLQVLQLENNPLQSPPAQI 253 (722)
T ss_pred cchhhhhhhhheeeeeccCCCCCChHHH
Confidence 776543 677777777777776544443
No 461
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.41 E-value=8e-13 Score=146.34 Aligned_cols=142 Identities=21% Similarity=0.208 Sum_probs=101.6
Q ss_pred CCeecccCCeeeEEEEcCCCcEEEEEEeecCCccc----------------------------------------HHHHH
Q 003504 513 GTLLAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLT----------------------------------------DQEAA 552 (815)
Q Consensus 513 ~~~ig~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~----------------------------------------~~~~~ 552 (815)
.+.||.|++|+||+|++.+|+.||||+.+.+-... +-+|.
T Consensus 122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 47899999999999999999999999986531100 00244
Q ss_pred HHHHHhcCC----CCCCceeeeeEEEe-CCeeEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCC
Q 003504 553 RELEYLGRI----KHPNLVPLTGYCIA-GDQRIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSE 627 (815)
Q Consensus 553 ~E~~~l~~l----~H~niv~l~g~~~~-~~~~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (815)
+|+..+.++ +|.+-+.+-.++.+ ....++||||+++++|.++.....
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~---------------------------- 253 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDE---------------------------- 253 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHh----------------------------
Confidence 455555544 23333343333332 456799999999999988764310
Q ss_pred CcccCHHHHHHHHHHHHH-HHHHHhcCCCCCeeeccCCCCceEEcCCCCeeecccccceecCC
Q 003504 628 GLLTTWRFRHKIALGTAR-ALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGN 689 (815)
Q Consensus 628 ~~~~~~~~~~~i~~~ia~-~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~ 689 (815)
... .+.+++..++. .+..+| ..+++|+|++|.||+++.++.+++.|||++..+.+
T Consensus 254 -~~~---~~~~ia~~~~~~~l~ql~---~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 254 -AGL---DRKALAENLARSFLNQVL---RDGFFHADLHPGNIFVLKDGKIIALDFGIVGRLSE 309 (437)
T ss_pred -cCC---CHHHHHHHHHHHHHHHHH---hCCceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence 001 23567777666 467788 78999999999999999999999999999987754
No 462
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.37 E-value=6.3e-13 Score=132.23 Aligned_cols=203 Identities=21% Similarity=0.340 Sum_probs=137.0
Q ss_pred HHHhcCCCCCCceeeeeEEEeCC-----eeEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCc
Q 003504 555 LEYLGRIKHPNLVPLTGYCIAGD-----QRIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGL 629 (815)
Q Consensus 555 ~~~l~~l~H~niv~l~g~~~~~~-----~~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 629 (815)
..-+-++.|.|||++..|+.+.. ....+.|||..|++..+|+..++ ...
T Consensus 118 FdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~--------------------------~~~ 171 (458)
T KOG1266|consen 118 FDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKK--------------------------NQK 171 (458)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHH--------------------------hhh
Confidence 34455667999999999987643 45788999999999999986422 133
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCceEEcCCCCeeecccccceecC-----CCCccccccccccccC
Q 003504 630 LTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFG-----NGLDEEIARGSPGYIP 704 (815)
Q Consensus 630 ~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~-----~~~~~~~~~gt~~y~a 704 (815)
.+......+|+-||..||.||| .|.++|+|+++..+-|++..+|-+||+--.-..... .........+-++|.|
T Consensus 172 a~~~~~wkkw~tqIlsal~yLh-s~~PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a 250 (458)
T KOG1266|consen 172 ALFQKAWKKWCTQILSALSYLH-SCDPPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSA 250 (458)
T ss_pred hhhHHHHHHHHHHHHhhhhhhh-ccCCccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCcccc
Confidence 4555566789999999999999 468999999999999999999988886422111110 0111223346789999
Q ss_pred CcccCCCCCCCCCcCcchhHHHHHHHHHhCCCCCCC-CCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHH
Q 003504 705 PEFAQPDSDFPTPKSDVYCYGVVLLELITGKKPLGD-DYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEA 783 (815)
Q Consensus 705 PE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 783 (815)
||+-.... .+..+|||+||+...||..+.---.. ....+....+..... -.... .-
T Consensus 251 ~~sg~~tn--~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia~~i~----------~len~-----------lq 307 (458)
T KOG1266|consen 251 PESGTTTN--TTGASDIYKFGMCALEMAILEIQSTNSESKVEVEENIANVII----------GLENG-----------LQ 307 (458)
T ss_pred CCcCcccc--cccchhhhhhhHHHHHHHHheeccCCCcceeehhhhhhhhee----------eccCc-----------cc
Confidence 99755444 46789999999999999887643221 111111111111000 00000 11
Q ss_pred HHHHhhccccCCCCCCCHHHHHHH
Q 003504 784 LKIGYLCTADLPLKRPSMQQIVGL 807 (815)
Q Consensus 784 ~~l~~~Cl~~dP~~RPs~~~v~~~ 807 (815)
..++.+|++..|..||+|.+++..
T Consensus 308 r~~i~kcl~~eP~~rp~ar~llfH 331 (458)
T KOG1266|consen 308 RGSITKCLEGEPNGRPDARLLLFH 331 (458)
T ss_pred cCcCcccccCCCCCCcchhhhhcC
Confidence 356778999999999999988643
No 463
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.36 E-value=4.3e-13 Score=127.34 Aligned_cols=34 Identities=26% Similarity=0.243 Sum_probs=12.9
Q ss_pred CCCCCCCCeEeccCCcCCCcchhh-----hhcccceeee
Q 003504 192 FAGLKSITNLNISGNLFQGSVMGV-----FLESLEVIDL 225 (815)
Q Consensus 192 ~~~l~~L~~L~Ls~N~l~~~~~~~-----~l~~L~~L~L 225 (815)
+..+++|+.|+|.+|+++..+... .+++|+.||-
T Consensus 109 L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD~ 147 (175)
T PF14580_consen 109 LSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLDG 147 (175)
T ss_dssp GGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEETT
T ss_pred HHcCCCcceeeccCCcccchhhHHHHHHHHcChhheeCC
Confidence 344555555555555554433211 1566666664
No 464
>PLN03150 hypothetical protein; Provisional
Probab=99.35 E-value=2.9e-12 Score=148.56 Aligned_cols=110 Identities=34% Similarity=0.504 Sum_probs=92.8
Q ss_pred CCCEEEecCCcCcCCCccccccccCCCeEecCCCcCcCCCchhhhcCCCCCEEeCCCCcCCCCCCcc--CCCCccEEEcc
Q 003504 271 NLKHLSLAYNRFTRQEFPQIGTLLGLEHLNLSRTSLIGDIPSEILQLSSLHTLDLSMNHLTGQIPTV--SAKNLGIIDMS 348 (815)
Q Consensus 271 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~--~~~~L~~L~ls 348 (815)
.++.|+|++|.+++..+..++.+++|+.|+|++|.+.|.+|..+..+++|+.|+|++|++++.+|.. .+++|+.|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 3778889999888777788888999999999999999899999999999999999999999888874 67899999999
Q ss_pred CCcCcccCChHHhhcCCCCceeeccCCCCcccC
Q 003504 349 HNNLSGEIPASLLEKLPQMERFNFSYNNLTLCA 381 (815)
Q Consensus 349 ~N~l~~~~p~~~~~~l~~l~~l~l~~N~l~~~~ 381 (815)
+|+++|.+|..+...+.++..+++.+|+.. |+
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~l-c~ 530 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGL-CG 530 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccc-cC
Confidence 999999999776555567788899988753 54
No 465
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.34 E-value=9.9e-13 Score=124.88 Aligned_cols=139 Identities=32% Similarity=0.407 Sum_probs=49.4
Q ss_pred ECcCCCCCCCCcccCCCCCCCEEEccCCcCCccCCcccc-CCCCCcEEEccCCcCCCCChhhhcCCcCCCEEEcCCCccc
Q 003504 59 DLSENNITALPSDLWSLGSLKSLNLSYNRISGSLPSNIG-NFGLLEVFDLSNNNFSGEIPAAISSLVSLRVLKLDGNMFQ 137 (815)
Q Consensus 59 ~Ls~n~l~~lp~~~~~l~~L~~L~L~~N~i~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 137 (815)
.|+.+.|..+|. ..+...+++|+|++|.|+.+ +.++ .+.+|+.|||++|.|+.+ +.+..+++|++|+|++|+|+
T Consensus 3 ~lt~~~i~~~~~-~~n~~~~~~L~L~~n~I~~I--e~L~~~l~~L~~L~Ls~N~I~~l--~~l~~L~~L~~L~L~~N~I~ 77 (175)
T PF14580_consen 3 RLTANMIEQIAQ-YNNPVKLRELNLRGNQISTI--ENLGATLDKLEVLDLSNNQITKL--EGLPGLPRLKTLDLSNNRIS 77 (175)
T ss_dssp ------------------------------------S--TT-TT--EEE-TTS--S----TT----TT--EEE--SS---
T ss_pred cccccccccccc-cccccccccccccccccccc--cchhhhhcCCCEEECCCCCCccc--cCccChhhhhhcccCCCCCC
Confidence 355666776663 34455789999999999854 3565 578899999999999865 35888889999999999998
Q ss_pred ccCCccc-ccccccceeeccCCcCCCCCCc-hhhccCCCCCEEEcCCCcccCCCC----CCCCCCCCCeEecc
Q 003504 138 WSIPPGL-LNCQSLVTVDLSMNQLNGSLPD-GFGAAFPKLKSLNLAGNEIKGRDT----HFAGLKSITNLNIS 204 (815)
Q Consensus 138 ~~~~~~~-~~l~~L~~L~l~~N~l~~~lp~-~~~~~l~~L~~L~L~~N~l~~~~~----~~~~l~~L~~L~Ls 204 (815)
. +.+.+ ..+++|++|+|++|+|. .+.+ .....+++|+.|+|.+|.++..+. .+..+|+|+.||-.
T Consensus 78 ~-i~~~l~~~lp~L~~L~L~~N~I~-~l~~l~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD~~ 148 (175)
T PF14580_consen 78 S-ISEGLDKNLPNLQELYLSNNKIS-DLNELEPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLDGQ 148 (175)
T ss_dssp S--CHHHHHH-TT--EEE-TTS----SCCCCGGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEETTE
T ss_pred c-cccchHHhCCcCCEEECcCCcCC-ChHHhHHHHcCCCcceeeccCCcccchhhHHHHHHHHcChhheeCCE
Confidence 4 44445 46888999999999887 4432 334568888888888888876542 25678888888753
No 466
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.30 E-value=3e-13 Score=150.12 Aligned_cols=266 Identities=26% Similarity=0.256 Sum_probs=141.7
Q ss_pred CCCEEECcCCCCCCCCcccCCCCCCCEEEccCCcCCccCCccccCCCCCcEEEccCCcCCCCChhhhcCCcCCCEEEcCC
Q 003504 54 KLQSLDLSENNITALPSDLWSLGSLKSLNLSYNRISGSLPSNIGNFGLLEVFDLSNNNFSGEIPAAISSLVSLRVLKLDG 133 (815)
Q Consensus 54 ~L~~L~Ls~n~l~~lp~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 133 (815)
.++.++..++.+.........+..++.++++.|.|.. +-..+..+.+|+.|+|.+|+|..+. ..+..+++|++|+|++
T Consensus 50 ~~~~~~~~~~~~~~~~~~~~~l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~i~-~~l~~~~~L~~L~ls~ 127 (414)
T KOG0531|consen 50 DLEEIDLIFNLDGSDEDLVESLTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEKIE-NLLSSLVNLQVLDLSF 127 (414)
T ss_pred hhhhhcchhccccchhhhHHHhHhHHhhccchhhhhh-hhcccccccceeeeeccccchhhcc-cchhhhhcchheeccc
Confidence 4455555555444332111235566666677777663 3344666667777777777776442 2256667777777777
Q ss_pred CcccccCCcccccccccceeeccCCcCCCCCCchhhccCCCCCEEEcCCCcccCCCCC-CCCCCCCCeEeccCCcCCCcc
Q 003504 134 NMFQWSIPPGLLNCQSLVTVDLSMNQLNGSLPDGFGAAFPKLKSLNLAGNEIKGRDTH-FAGLKSITNLNISGNLFQGSV 212 (815)
Q Consensus 134 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~ 212 (815)
|+|+... .+..++.|+.|++++|.|+ .++.. ..+.+|+.+++++|.++.+... ...+.+|+.+.+.+|.+..+.
T Consensus 128 N~I~~i~--~l~~l~~L~~L~l~~N~i~-~~~~~--~~l~~L~~l~l~~n~i~~ie~~~~~~~~~l~~l~l~~n~i~~i~ 202 (414)
T KOG0531|consen 128 NKITKLE--GLSTLTLLKELNLSGNLIS-DISGL--ESLKSLKLLDLSYNRIVDIENDELSELISLEELDLGGNSIREIE 202 (414)
T ss_pred ccccccc--chhhccchhhheeccCcch-hccCC--ccchhhhcccCCcchhhhhhhhhhhhccchHHHhccCCchhccc
Confidence 7776432 3555566777777777776 44332 2256666666666666655443 456666667777777666665
Q ss_pred hhhhhcccceeeeccccccCcccccccccccCCccceEEEcCCCccCcchhhccccCCCCCEEEecCCcCcCCCcccccc
Q 003504 213 MGVFLESLEVIDLRSNQFQGHISQVQFNSSYNWSRLVYVDLSENQLSGEIFHNFSQAQNLKHLSLAYNRFTRQEFPQIGT 292 (815)
Q Consensus 213 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 292 (815)
....+..+..+++..|.++.. .. ...+.. ..|+.+++++|++...+ ..+..
T Consensus 203 ~~~~~~~l~~~~l~~n~i~~~-~~-----l~~~~~----------------------~~L~~l~l~~n~i~~~~-~~~~~ 253 (414)
T KOG0531|consen 203 GLDLLKKLVLLSLLDNKISKL-EG-----LNELVM----------------------LHLRELYLSGNRISRSP-EGLEN 253 (414)
T ss_pred chHHHHHHHHhhcccccceec-cC-----cccchh----------------------HHHHHHhcccCcccccc-ccccc
Confidence 555555555556666655411 00 000111 02455555555554332 33445
Q ss_pred ccCCCeEecCCCcCcCCCchhhhcCCCCCEEeCCCCcCCCCC-----C-ccCCCCccEEEccCCcCcccCC
Q 003504 293 LLGLEHLNLSRTSLIGDIPSEILQLSSLHTLDLSMNHLTGQI-----P-TVSAKNLGIIDMSHNNLSGEIP 357 (815)
Q Consensus 293 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~-----~-~~~~~~L~~L~ls~N~l~~~~p 357 (815)
+.++..|++++|.+... ..+.....+..+.++.|.+.... + ....+.+..+.+..|.+....+
T Consensus 254 ~~~l~~l~~~~n~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (414)
T KOG0531|consen 254 LKNLPVLDLSSNRISNL--EGLERLPKLSELWLNDNKLALSEAISQEYITSAAPTLVTLTLELNPIRKISS 322 (414)
T ss_pred cccccccchhhcccccc--ccccccchHHHhccCcchhcchhhhhccccccccccccccccccCccccccc
Confidence 55555555555555422 12333445555555666554211 1 1244566666777776654433
No 467
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.30 E-value=1.8e-13 Score=137.67 Aligned_cols=252 Identities=25% Similarity=0.293 Sum_probs=129.7
Q ss_pred cccCCCCCCEEECcCCCCC-----CCCcccCCCCCCCEEEccCCcCCc----cCCcc-------ccCCCCCcEEEccCCc
Q 003504 48 TIGKLSKLQSLDLSENNIT-----ALPSDLWSLGSLKSLNLSYNRISG----SLPSN-------IGNFGLLEVFDLSNNN 111 (815)
Q Consensus 48 ~~~~l~~L~~L~Ls~n~l~-----~lp~~~~~l~~L~~L~L~~N~i~~----~~~~~-------~~~l~~L~~L~Ls~N~ 111 (815)
.+..+..+++|+||+|.+. .+-..+.+.++|++-++++= ++| .+|+. +...++|++||||+|-
T Consensus 25 ~~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~-ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA 103 (382)
T KOG1909|consen 25 ELEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDM-FTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNA 103 (382)
T ss_pred HhcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhh-hcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccc
Confidence 3555677888888888776 24455556667777777742 222 22332 2333455555555555
Q ss_pred CCCCChhhh----cCCcCCCEEEcCCCcccccCCcccccccccceeeccCCcCCCCCCchhhccCCCCCEEEcCCCcccC
Q 003504 112 FSGEIPAAI----SSLVSLRVLKLDGNMFQWSIPPGLLNCQSLVTVDLSMNQLNGSLPDGFGAAFPKLKSLNLAGNEIKG 187 (815)
Q Consensus 112 l~~~~p~~~----~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~ 187 (815)
|....+..| .+++.|++|.|.+|-+.-.-...++ ..|..|. .|+.. ..-++|+.+...+|++..
T Consensus 104 ~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~--~al~~l~--~~kk~--------~~~~~Lrv~i~~rNrlen 171 (382)
T KOG1909|consen 104 FGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLG--RALFELA--VNKKA--------ASKPKLRVFICGRNRLEN 171 (382)
T ss_pred cCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHH--HHHHHHH--HHhcc--------CCCcceEEEEeecccccc
Confidence 543333322 2344455555554444311000111 0122211 11110 123567777777777765
Q ss_pred CC-----CCCCCCCCCCeEeccCCcCCCcchhh----h--hcccceeeeccccccCcccccccccccCCccceEEEcCCC
Q 003504 188 RD-----THFAGLKSITNLNISGNLFQGSVMGV----F--LESLEVIDLRSNQFQGHISQVQFNSSYNWSRLVYVDLSEN 256 (815)
Q Consensus 188 ~~-----~~~~~l~~L~~L~Ls~N~l~~~~~~~----~--l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N 256 (815)
.+ ..|...+.|+++.++.|.|..-.... | ++.|+.|||+.|-|+..........+..|++|+.|+++.|
T Consensus 172 ~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dc 251 (382)
T KOG1909|consen 172 GGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDC 251 (382)
T ss_pred ccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeeccccc
Confidence 43 23666677788888887775433311 1 6677777777777665444444444455556666666666
Q ss_pred ccCcchhhccccCCCCCEEEecCCcCcCCCccccccccCCCeEecCCCcCcCC----CchhhhcCCCCCEEeCCCCcCC
Q 003504 257 QLSGEIFHNFSQAQNLKHLSLAYNRFTRQEFPQIGTLLGLEHLNLSRTSLIGD----IPSEILQLSSLHTLDLSMNHLT 331 (815)
Q Consensus 257 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~ls~N~l~ 331 (815)
.+.......|.. ..-...++|+.|.|.+|.++.. +...+...+.|..|+|++|++.
T Consensus 252 ll~~~Ga~a~~~-------------------al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 252 LLENEGAIAFVD-------------------ALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred ccccccHHHHHH-------------------HHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 555443332211 0001234555555555555321 2233445677777777777773
No 468
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.27 E-value=5.8e-13 Score=137.47 Aligned_cols=87 Identities=24% Similarity=0.248 Sum_probs=46.4
Q ss_pred ccceEEEcCCCccCcch-hhccccCCCCCEEEecCCcCcCCCcccc------ccccCCCeEecCCCcCcCC-CchhhhcC
Q 003504 246 SRLVYVDLSENQLSGEI-FHNFSQAQNLKHLSLAYNRFTRQEFPQI------GTLLGLEHLNLSRTSLIGD-IPSEILQL 317 (815)
Q Consensus 246 ~~L~~L~Ls~N~l~~~~-~~~~~~l~~L~~L~L~~N~l~~~~~~~~------~~l~~L~~L~Ls~N~l~~~-~p~~~~~l 317 (815)
..|+.|||++|.+-... ....+.++.|..|+++.+.+.++..+.. ..+++|++|+++.|++..- .-..+..+
T Consensus 246 ~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l 325 (505)
T KOG3207|consen 246 QTLQELDLSNNNLIDFDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTL 325 (505)
T ss_pred hHHhhccccCCcccccccccccccccchhhhhccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhcc
Confidence 34444444444443221 1233455666666666666655444333 4556677777777776321 11344456
Q ss_pred CCCCEEeCCCCcCCC
Q 003504 318 SSLHTLDLSMNHLTG 332 (815)
Q Consensus 318 ~~L~~L~ls~N~l~~ 332 (815)
++|+.|.+..|.|+.
T Consensus 326 ~nlk~l~~~~n~ln~ 340 (505)
T KOG3207|consen 326 ENLKHLRITLNYLNK 340 (505)
T ss_pred chhhhhhcccccccc
Confidence 667777777777764
No 469
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.27 E-value=8.6e-13 Score=129.34 Aligned_cols=134 Identities=26% Similarity=0.277 Sum_probs=88.4
Q ss_pred CCCCCEEEcCCCcccCCCCCCCCCCCCCeEeccCCcCCCcchhhhhcccceeeeccccccCcccccccccccCCccceEE
Q 003504 172 FPKLKSLNLAGNEIKGRDTHFAGLKSITNLNISGNLFQGSVMGVFLESLEVIDLRSNQFQGHISQVQFNSSYNWSRLVYV 251 (815)
Q Consensus 172 l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~L~~L 251 (815)
+.-|++|+|++|.|+.++....-++.++.|++|+|.|..+...+++++|+.|||++|.++.
T Consensus 283 Wq~LtelDLS~N~I~~iDESvKL~Pkir~L~lS~N~i~~v~nLa~L~~L~~LDLS~N~Ls~------------------- 343 (490)
T KOG1259|consen 283 WQELTELDLSGNLITQIDESVKLAPKLRRLILSQNRIRTVQNLAELPQLQLLDLSGNLLAE------------------- 343 (490)
T ss_pred HhhhhhccccccchhhhhhhhhhccceeEEeccccceeeehhhhhcccceEeecccchhHh-------------------
Confidence 4567778888888887777777778888888888888777776677777777777776542
Q ss_pred EcCCCccCcchhhccccCCCCCEEEecCCcCcCCCccccccccCCCeEecCCCcCcCCC-chhhhcCCCCCEEeCCCCcC
Q 003504 252 DLSENQLSGEIFHNFSQAQNLKHLSLAYNRFTRQEFPQIGTLLGLEHLNLSRTSLIGDI-PSEILQLSSLHTLDLSMNHL 330 (815)
Q Consensus 252 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~ls~N~l 330 (815)
+...-..+-|++.|.|+.|.|..+ ..++.+-+|..||+++|+|.... ...+++++-|+.|.|.+|.|
T Consensus 344 ----------~~Gwh~KLGNIKtL~La~N~iE~L--SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl 411 (490)
T KOG1259|consen 344 ----------CVGWHLKLGNIKTLKLAQNKIETL--SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPL 411 (490)
T ss_pred ----------hhhhHhhhcCEeeeehhhhhHhhh--hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCc
Confidence 111122344555666666655432 34566667777777777765321 24567777888888888888
Q ss_pred CCCCCc
Q 003504 331 TGQIPT 336 (815)
Q Consensus 331 ~~~~~~ 336 (815)
.+.+..
T Consensus 412 ~~~vdY 417 (490)
T KOG1259|consen 412 AGSVDY 417 (490)
T ss_pred cccchH
Confidence 765543
No 470
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.27 E-value=4.6e-13 Score=148.63 Aligned_cols=248 Identities=27% Similarity=0.284 Sum_probs=175.2
Q ss_pred cCCCCCCEEECcCCCCCCCCcccCCCCCCCEEEccCCcCCccCCccccCCCCCcEEEccCCcCCCCChhhhcCCcCCCEE
Q 003504 50 GKLSKLQSLDLSENNITALPSDLWSLGSLKSLNLSYNRISGSLPSNIGNFGLLEVFDLSNNNFSGEIPAAISSLVSLRVL 129 (815)
Q Consensus 50 ~~l~~L~~L~Ls~n~l~~lp~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 129 (815)
..+..++.+++..|.|+.+-..+..+++|+.|++.+|+|..+ ...+..+++|++|+|++|+|+.+ ..+..++.|+.|
T Consensus 69 ~~l~~l~~l~l~~n~i~~~~~~l~~~~~l~~l~l~~n~i~~i-~~~l~~~~~L~~L~ls~N~I~~i--~~l~~l~~L~~L 145 (414)
T KOG0531|consen 69 ESLTSLKELNLRQNLIAKILNHLSKLKSLEALDLYDNKIEKI-ENLLSSLVNLQVLDLSFNKITKL--EGLSTLTLLKEL 145 (414)
T ss_pred HHhHhHHhhccchhhhhhhhcccccccceeeeeccccchhhc-ccchhhhhcchheeccccccccc--cchhhccchhhh
Confidence 467788888999999998766788899999999999999854 33388899999999999999977 457888889999
Q ss_pred EcCCCcccccCCcccccccccceeeccCCcCCCCCCchhhccCCCCCEEEcCCCcccCCCCCCCCCCCCCeEeccCCcCC
Q 003504 130 KLDGNMFQWSIPPGLLNCQSLVTVDLSMNQLNGSLPDGFGAAFPKLKSLNLAGNEIKGRDTHFAGLKSITNLNISGNLFQ 209 (815)
Q Consensus 130 ~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~ 209 (815)
++++|.|+. ...+..+++|+.+++++|++. .++......+.+|+.+.+.+|.+..+. .+..+..+..+++..|.++
T Consensus 146 ~l~~N~i~~--~~~~~~l~~L~~l~l~~n~i~-~ie~~~~~~~~~l~~l~l~~n~i~~i~-~~~~~~~l~~~~l~~n~i~ 221 (414)
T KOG0531|consen 146 NLSGNLISD--ISGLESLKSLKLLDLSYNRIV-DIENDELSELISLEELDLGGNSIREIE-GLDLLKKLVLLSLLDNKIS 221 (414)
T ss_pred eeccCcchh--ccCCccchhhhcccCCcchhh-hhhhhhhhhccchHHHhccCCchhccc-chHHHHHHHHhhcccccce
Confidence 999999984 345777999999999999998 666520246789999999999998653 2344555666699999998
Q ss_pred Ccchhhhhcc--cceeeeccccccCcccccccccccCCccceEEEcCCCccCcchhhccccCCCCCEEEecCCcCcCCCc
Q 003504 210 GSVMGVFLES--LEVIDLRSNQFQGHISQVQFNSSYNWSRLVYVDLSENQLSGEIFHNFSQAQNLKHLSLAYNRFTRQEF 287 (815)
Q Consensus 210 ~~~~~~~l~~--L~~L~L~~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 287 (815)
.+.....+.. |+.+++++|.+.... ..+..+..+..|++.+|.+. ..
T Consensus 222 ~~~~l~~~~~~~L~~l~l~~n~i~~~~-----~~~~~~~~l~~l~~~~n~~~------------------------~~-- 270 (414)
T KOG0531|consen 222 KLEGLNELVMLHLRELYLSGNRISRSP-----EGLENLKNLPVLDLSSNRIS------------------------NL-- 270 (414)
T ss_pred eccCcccchhHHHHHHhcccCcccccc-----ccccccccccccchhhcccc------------------------cc--
Confidence 8776555554 899999999875221 11223344445555554443 22
Q ss_pred cccccccCCCeEecCCCcCcCC---Cchh-hhcCCCCCEEeCCCCcCCCCCC
Q 003504 288 PQIGTLLGLEHLNLSRTSLIGD---IPSE-ILQLSSLHTLDLSMNHLTGQIP 335 (815)
Q Consensus 288 ~~~~~l~~L~~L~Ls~N~l~~~---~p~~-~~~l~~L~~L~ls~N~l~~~~~ 335 (815)
..+.....+..+.++.|.+... .... ....+.+..+.+..|.+....+
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (414)
T KOG0531|consen 271 EGLERLPKLSELWLNDNKLALSEAISQEYITSAAPTLVTLTLELNPIRKISS 322 (414)
T ss_pred ccccccchHHHhccCcchhcchhhhhccccccccccccccccccCccccccc
Confidence 1233444444555555554311 1111 3455677777777777766444
No 471
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.25 E-value=2e-12 Score=133.56 Aligned_cols=208 Identities=23% Similarity=0.231 Sum_probs=124.1
Q ss_pred ccccccceeeccCCcCCCCCCc-hhhccCCCCCEEEcCCCcccCCCC---CCCCCCCCCeEeccCCcCCCcchhhhhccc
Q 003504 145 LNCQSLVTVDLSMNQLNGSLPD-GFGAAFPKLKSLNLAGNEIKGRDT---HFAGLKSITNLNISGNLFQGSVMGVFLESL 220 (815)
Q Consensus 145 ~~l~~L~~L~l~~N~l~~~lp~-~~~~~l~~L~~L~L~~N~l~~~~~---~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~L 220 (815)
.++++|+.+.|.+..+. .++. .....+++++.|+|++|-+..+.+ -...|++|+.|+|+.|++...
T Consensus 118 sn~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~--------- 187 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNF--------- 187 (505)
T ss_pred hhHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCC---------
Confidence 35778888888888885 4442 334556777777777776665432 234566666666666655432
Q ss_pred ceeeeccccccCcccccccccccCCccceEEEcCCCccCcch-hhccccCCCCCEEEecCCcCcCCCccccccccCCCeE
Q 003504 221 EVIDLRSNQFQGHISQVQFNSSYNWSRLVYVDLSENQLSGEI-FHNFSQAQNLKHLSLAYNRFTRQEFPQIGTLLGLEHL 299 (815)
Q Consensus 221 ~~L~L~~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 299 (815)
.+... ...+++|+.|.|+.|.|+-.. -.....+|+|+.|+|.+|..-.+.......+..|+.|
T Consensus 188 -------------~~s~~---~~~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~L 251 (505)
T KOG3207|consen 188 -------------ISSNT---TLLLSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQEL 251 (505)
T ss_pred -------------ccccc---hhhhhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhc
Confidence 21111 113456666666666666322 2234556777777777774322222344556677788
Q ss_pred ecCCCcCcCCC-chhhhcCCCCCEEeCCCCcCCCC-CCcc-------CCCCccEEEccCCcCcccCChHHhhcCCCCcee
Q 003504 300 NLSRTSLIGDI-PSEILQLSSLHTLDLSMNHLTGQ-IPTV-------SAKNLGIIDMSHNNLSGEIPASLLEKLPQMERF 370 (815)
Q Consensus 300 ~Ls~N~l~~~~-p~~~~~l~~L~~L~ls~N~l~~~-~~~~-------~~~~L~~L~ls~N~l~~~~p~~~~~~l~~l~~l 370 (815)
+|++|++.... -...+.++.|+.|+++.+.++.. .|.. .++.|+.|+++.|++...-...-+..+++|+.|
T Consensus 252 dLs~N~li~~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l 331 (505)
T KOG3207|consen 252 DLSNNNLIDFDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHL 331 (505)
T ss_pred cccCCcccccccccccccccchhhhhccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhh
Confidence 88888776322 13456677788888888877752 2222 457888888888888622222334556667777
Q ss_pred eccCCCCc
Q 003504 371 NFSYNNLT 378 (815)
Q Consensus 371 ~l~~N~l~ 378 (815)
.+..|.++
T Consensus 332 ~~~~n~ln 339 (505)
T KOG3207|consen 332 RITLNYLN 339 (505)
T ss_pred hccccccc
Confidence 66666664
No 472
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.24 E-value=1.8e-12 Score=127.06 Aligned_cols=204 Identities=25% Similarity=0.243 Sum_probs=117.8
Q ss_pred ccCCCCCCCEEEccCCcCCccCCccccCCCCCcEEEccCCcCCCCChhhhcCCcCCCEEEcCCC-cccccCCcccccccc
Q 003504 71 DLWSLGSLKSLNLSYNRISGSLPSNIGNFGLLEVFDLSNNNFSGEIPAAISSLVSLRVLKLDGN-MFQWSIPPGLLNCQS 149 (815)
Q Consensus 71 ~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~~~~~~~~l~~ 149 (815)
++..+.+|+.+.++++.-..+ -+.-..-+.|+++.+.+..++.. +.+-.++.+..+.-+.- -.+|..-..+...+.
T Consensus 209 ~l~~f~~l~~~~~s~~~~~~i-~~~~~~kptl~t~~v~~s~~~~~--~~l~pe~~~~D~~~~E~~t~~G~~~~~~dTWq~ 285 (490)
T KOG1259|consen 209 NLNAFRNLKTLKFSALSTENI-VDIELLKPTLQTICVHNTTIQDV--PSLLPETILADPSGSEPSTSNGSALVSADTWQE 285 (490)
T ss_pred chHHhhhhheeeeeccchhhe-eceeecCchhheeeeeccccccc--ccccchhhhcCccCCCCCccCCceEEecchHhh
Confidence 334456677776666543211 11112235677777776666522 12222233332222211 122222233334567
Q ss_pred cceeeccCCcCCCCCCchhhccCCCCCEEEcCCCcccCCCCCCCCCCCCCeEeccCCcCCCcchhhh-hcccceeeeccc
Q 003504 150 LVTVDLSMNQLNGSLPDGFGAAFPKLKSLNLAGNEIKGRDTHFAGLKSITNLNISGNLFQGSVMGVF-LESLEVIDLRSN 228 (815)
Q Consensus 150 L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~-l~~L~~L~L~~N 228 (815)
|++||||+|.|+ .+..+. .-.|+++.|++++|.|+.++. +..|++|+.||||+|.++.+..... +.++++|.|+.|
T Consensus 286 LtelDLS~N~I~-~iDESv-KL~Pkir~L~lS~N~i~~v~n-La~L~~L~~LDLS~N~Ls~~~Gwh~KLGNIKtL~La~N 362 (490)
T KOG1259|consen 286 LTELDLSGNLIT-QIDESV-KLAPKLRRLILSQNRIRTVQN-LAELPQLQLLDLSGNLLAECVGWHLKLGNIKTLKLAQN 362 (490)
T ss_pred hhhccccccchh-hhhhhh-hhccceeEEeccccceeeehh-hhhcccceEeecccchhHhhhhhHhhhcCEeeeehhhh
Confidence 888888888887 665554 457888888888888887655 7778888888888888888777665 777777877777
Q ss_pred cccCcccccccccccCCccceEEEcCCCccCcchhhccccCCCCCEEEecCCcCcCCCccccccccCCCeEecCCCcCcC
Q 003504 229 QFQGHISQVQFNSSYNWSRLVYVDLSENQLSGEIFHNFSQAQNLKHLSLAYNRFTRQEFPQIGTLLGLEHLNLSRTSLIG 308 (815)
Q Consensus 229 ~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 308 (815)
.+.. ...+..+-+|.+||+++|+|.... ....+++++-|+++.|.+|++.+
T Consensus 363 ~iE~------LSGL~KLYSLvnLDl~~N~Ie~ld-----------------------eV~~IG~LPCLE~l~L~~NPl~~ 413 (490)
T KOG1259|consen 363 KIET------LSGLRKLYSLVNLDLSSNQIEELD-----------------------EVNHIGNLPCLETLRLTGNPLAG 413 (490)
T ss_pred hHhh------hhhhHhhhhheeccccccchhhHH-----------------------HhcccccccHHHHHhhcCCCccc
Confidence 6531 111223334444444444443211 12456777777777777777764
Q ss_pred C
Q 003504 309 D 309 (815)
Q Consensus 309 ~ 309 (815)
.
T Consensus 414 ~ 414 (490)
T KOG1259|consen 414 S 414 (490)
T ss_pred c
Confidence 3
No 473
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.24 E-value=3.1e-11 Score=116.87 Aligned_cols=130 Identities=18% Similarity=0.120 Sum_probs=94.3
Q ss_pred CCeecccCCeeeEEEEcCCCcEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCce-eeeeEEEeCCeeEEEEEeCCCCCh
Q 003504 513 GTLLAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLV-PLTGYCIAGDQRIAIYDYMENGNL 591 (815)
Q Consensus 513 ~~~ig~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv-~l~g~~~~~~~~~lv~ey~~~gsL 591 (815)
.+.++.|.++.||+++.. +..|++|....... ....+.+|+.++..+.+.+++ +++++ .....++||||+++.++
T Consensus 3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~--~~~~~~lv~e~i~G~~l 78 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYF--DPETGVLITEFIEGSEL 78 (170)
T ss_pred eeecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEE--eCCCCeEEEEecCCCcc
Confidence 357889999999999876 67899998755321 234568899999988655554 44443 23346899999999876
Q ss_pred hhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCC--CCCeeeccCCCCceE
Q 003504 592 QNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGC--SPPIIHRDIKASSVY 669 (815)
Q Consensus 592 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~--~~~ivHrDlk~~NIl 669 (815)
...-. ....++.+++++|+.||... ...++|||++|.||+
T Consensus 79 ~~~~~--------------------------------------~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil 120 (170)
T cd05151 79 LTEDF--------------------------------------SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFL 120 (170)
T ss_pred ccccc--------------------------------------cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEE
Confidence 53200 01235678999999999321 123699999999999
Q ss_pred EcCCCCeeecccccce
Q 003504 670 LDMNLEPRLSDFGLAK 685 (815)
Q Consensus 670 l~~~~~~kl~Dfgla~ 685 (815)
++ ++.+++.|||.+.
T Consensus 121 ~~-~~~~~liDf~~a~ 135 (170)
T cd05151 121 LD-DGRLWLIDWEYAG 135 (170)
T ss_pred EE-CCeEEEEeccccc
Confidence 99 6689999999875
No 474
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.20 E-value=2.9e-11 Score=131.43 Aligned_cols=247 Identities=21% Similarity=0.190 Sum_probs=169.7
Q ss_pred CCCCCCeecc--cCCeeeEEEEc---CCCcEEEEEEeecC--CcccHHHHHHHHHHhcCCC-CCCceeeeeEEEeCCeeE
Q 003504 509 NFDRGTLLAE--GKFGPVYRGFL---PGGIHVAVKVLVHG--STLTDQEAARELEYLGRIK-HPNLVPLTGYCIAGDQRI 580 (815)
Q Consensus 509 ~~~~~~~ig~--G~~g~Vy~~~~---~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~ 580 (815)
.|.....+|. |.+|.||.+.. .++..+|+|.-+.. .......=.+|+..-.+++ |+|.++....+..++..+
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lf 194 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILF 194 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcce
Confidence 4556788999 99999999986 46788999974322 2223333456777777774 999999888888888999
Q ss_pred EEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeee
Q 003504 581 AIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIH 660 (815)
Q Consensus 581 lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivH 660 (815)
+-+|++. .+|.++-+..-.. ......|.....+...-+.||..+| ...++|
T Consensus 195 iqtE~~~-~sl~~~~~~~~~~-------------------------~p~~~l~~~~~~~~~~~~~al~~~h---s~~~~~ 245 (524)
T KOG0601|consen 195 IQTELCG-ESLQSYCHTPCNF-------------------------LPDNLLWNSLRDWLSRDVTALSHLH---SNNIVH 245 (524)
T ss_pred eeecccc-chhHHhhhccccc-------------------------CCchhhhhHHhhhhhcccccccccC---CCcccc
Confidence 9999887 5888877642110 0112334333333333333999999 899999
Q ss_pred ccCCCCceEEcCC-CCeeecccccceecCCCCcc------ccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHh
Q 003504 661 RDIKASSVYLDMN-LEPRLSDFGLAKIFGNGLDE------EIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELIT 733 (815)
Q Consensus 661 rDlk~~NIll~~~-~~~kl~Dfgla~~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~t 733 (815)
-|+||.||++..+ ...+++|||+...+..+... ....|...|++||...+. ++...|+|++|.+..|..+
T Consensus 246 ~~~kp~~i~~~~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l---~~~~~di~sl~ev~l~~~l 322 (524)
T KOG0601|consen 246 DDLKPANIFTTSDWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGL---ATFASDIFSLGEVILEAIL 322 (524)
T ss_pred cccchhheecccccceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccc---cchHhhhcchhhhhHhhHh
Confidence 9999999999999 88999999999888765411 112477789999998766 4889999999999999999
Q ss_pred CCCCCCCCCCccccccHHHHHHHHHhcCCCCcccccc-ccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHH
Q 003504 734 GKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPK-IRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIV 805 (815)
Q Consensus 734 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~ 805 (815)
+..+...... ..|.+ .+.. +..+....-..++...+..+++.+|..|++++.+.
T Consensus 323 ~~~~~~~g~~-------~~W~~-----------~r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~ 377 (524)
T KOG0601|consen 323 GSHLPSVGKN-------SSWSQ-----------LRQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILT 377 (524)
T ss_pred hcccccCCCC-------CCccc-----------cccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHh
Confidence 8766543211 11111 0010 11111112233444578889999999999887765
No 475
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.18 E-value=1.3e-11 Score=137.93 Aligned_cols=147 Identities=16% Similarity=0.196 Sum_probs=95.8
Q ss_pred cCCCCCCeecccCCeeeEEEEcCC-CcEEEEEEeecCCcc--------------------------c--------H----
Q 003504 508 SNFDRGTLLAEGKFGPVYRGFLPG-GIHVAVKVLVHGSTL--------------------------T--------D---- 548 (815)
Q Consensus 508 ~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~l~~~~~~--------------------------~--------~---- 548 (815)
.+|+. +.||.|++|+||+|++++ |+.||||+.+.+-.. . .
T Consensus 120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~ 198 (537)
T PRK04750 120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH 198 (537)
T ss_pred HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence 34665 799999999999999887 999999999753100 0 0
Q ss_pred --HHHHHHHHHhcCCC----CCCceeeeeEEEe-CCeeEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccc
Q 003504 549 --QEAARELEYLGRIK----HPNLVPLTGYCIA-GDQRIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSI 621 (815)
Q Consensus 549 --~~~~~E~~~l~~l~----H~niv~l~g~~~~-~~~~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (815)
-++.+|+..+.+++ +.+.+.+-.++.+ ....++||||++|+.+.++-.-..
T Consensus 199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~---------------------- 256 (537)
T PRK04750 199 DELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRA---------------------- 256 (537)
T ss_pred HhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHh----------------------
Confidence 12344554444442 4444444444433 456789999999999977421100
Q ss_pred cccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCceEEcCCC----CeeecccccceecCC
Q 003504 622 QNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNL----EPRLSDFGLAKIFGN 689 (815)
Q Consensus 622 ~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NIll~~~~----~~kl~Dfgla~~~~~ 689 (815)
...+ +..++...++ .|+++-...+++|+|+||.||+++.++ .+++.|||++..+..
T Consensus 257 -------~g~d---~~~la~~~v~--~~~~Qif~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 257 -------AGTD---MKLLAERGVE--VFFTQVFRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred -------cCCC---HHHHHHHHHH--HHHHHHHhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 0011 1223333222 223222367999999999999999988 999999999987754
No 476
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.15 E-value=5.3e-10 Score=122.69 Aligned_cols=166 Identities=19% Similarity=0.202 Sum_probs=124.0
Q ss_pred cCCCcEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEeCCCCChhhhhccCCCCCccccCC
Q 003504 529 LPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQTTEDW 608 (815)
Q Consensus 529 ~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~ 608 (815)
..++.+|.|...............+-++.|+.+|||||++++.........|+|+|-+.. |..++.+.
T Consensus 34 k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~P--l~~~lk~l---------- 101 (690)
T KOG1243|consen 34 KADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVRP--LETVLKEL---------- 101 (690)
T ss_pred eccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeecccc--HHHHHHHh----------
Confidence 557889999988765554445677888999999999999999999999999999998764 55555432
Q ss_pred CCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCceEEcCCCCeeecccccceecC
Q 003504 609 STDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFG 688 (815)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~ 688 (815)
.-...--.+.||+.||.|||+ ..+++|++|.-+-|+|++.|..||++|.++....
T Consensus 102 -----------------------~~~~v~~Gl~qIl~AL~FL~~--d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~ 156 (690)
T KOG1243|consen 102 -----------------------GKEEVCLGLFQILAALSFLND--DCNLVHGNVCKDSVFVNESGEWKLGGLELVSKAS 156 (690)
T ss_pred -----------------------HHHHHHHHHHHHHHHHHHHhc--cCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccc
Confidence 112233467889999999997 6689999999999999999999999999886543
Q ss_pred CCCc-cccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCC
Q 003504 689 NGLD-EEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGK 735 (815)
Q Consensus 689 ~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~ 735 (815)
.... .....--..|..|+.+.... ...|.|-||++++|++.|.
T Consensus 157 ~~~~~~~~~~~~~s~~~P~~~~~s~----~s~D~~~Lg~li~el~ng~ 200 (690)
T KOG1243|consen 157 GFNAPAKSLYLIESFDDPEEIDPSE----WSIDSWGLGCLIEELFNGS 200 (690)
T ss_pred cCCcccccchhhhcccChhhcCccc----cchhhhhHHHHHHHHhCcc
Confidence 2211 11111223466777553222 3469999999999999993
No 477
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.15 E-value=6.3e-12 Score=126.62 Aligned_cols=246 Identities=23% Similarity=0.253 Sum_probs=143.9
Q ss_pred cCCCCCCCEEEccCCcCCc----cCCccccCCCCCcEEEccCC---cCCCCChhh-------hcCCcCCCEEEcCCCccc
Q 003504 72 LWSLGSLKSLNLSYNRISG----SLPSNIGNFGLLEVFDLSNN---NFSGEIPAA-------ISSLVSLRVLKLDGNMFQ 137 (815)
Q Consensus 72 ~~~l~~L~~L~L~~N~i~~----~~~~~~~~l~~L~~L~Ls~N---~l~~~~p~~-------~~~l~~L~~L~L~~N~l~ 137 (815)
+-.+..++.|+|++|.|.. .+...+.+.++|+..++|+= ++...+|++ +.+.++|++|+||.|.|.
T Consensus 26 ~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G 105 (382)
T KOG1909|consen 26 LEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFG 105 (382)
T ss_pred hcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccC
Confidence 3346778888888888763 23345666677777777752 222223332 344556777777777665
Q ss_pred ccCCccc----ccccccceeeccCCcCCCCCCchh-hccCCCCCEEEcCCCcccCCCCCCCCCCCCCeEeccCCcCCCcc
Q 003504 138 WSIPPGL----LNCQSLVTVDLSMNQLNGSLPDGF-GAAFPKLKSLNLAGNEIKGRDTHFAGLKSITNLNISGNLFQGSV 212 (815)
Q Consensus 138 ~~~~~~~----~~l~~L~~L~l~~N~l~~~lp~~~-~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 212 (815)
-..+..| ..+.+|+.|.|.+|-+. ...... ... |..|. .| .....-++|+.+..++|.+.+-+
T Consensus 106 ~~g~~~l~~ll~s~~~L~eL~L~N~Glg-~~ag~~l~~a---l~~l~--~~------kk~~~~~~Lrv~i~~rNrlen~g 173 (382)
T KOG1909|consen 106 PKGIRGLEELLSSCTDLEELYLNNCGLG-PEAGGRLGRA---LFELA--VN------KKAASKPKLRVFICGRNRLENGG 173 (382)
T ss_pred ccchHHHHHHHHhccCHHHHhhhcCCCC-hhHHHHHHHH---HHHHH--HH------hccCCCcceEEEEeecccccccc
Confidence 4333332 34556666666666664 222111 111 11111 11 11233466777777777776655
Q ss_pred hhhh------hcccceeeeccccccCcccccccccccCCccceEEEcCCCccCcchhhccccCCCCCEEEecCCcCcCCC
Q 003504 213 MGVF------LESLEVIDLRSNQFQGHISQVQFNSSYNWSRLVYVDLSENQLSGEIFHNFSQAQNLKHLSLAYNRFTRQE 286 (815)
Q Consensus 213 ~~~~------l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 286 (815)
.... .+.|+.+.++.|.+...--. .....|..+++|+.|||..|-++...
T Consensus 174 a~~~A~~~~~~~~leevr~~qN~I~~eG~~------------------------al~eal~~~~~LevLdl~DNtft~eg 229 (382)
T KOG1909|consen 174 ATALAEAFQSHPTLEEVRLSQNGIRPEGVT------------------------ALAEALEHCPHLEVLDLRDNTFTLEG 229 (382)
T ss_pred HHHHHHHHHhccccceEEEecccccCchhH------------------------HHHHHHHhCCcceeeecccchhhhHH
Confidence 4332 44566666666655321111 23345566677777777777665432
Q ss_pred c----cccccccCCCeEecCCCcCcCCCchhhh-----cCCCCCEEeCCCCcCCCC------CCccCCCCccEEEccCCc
Q 003504 287 F----PQIGTLLGLEHLNLSRTSLIGDIPSEIL-----QLSSLHTLDLSMNHLTGQ------IPTVSAKNLGIIDMSHNN 351 (815)
Q Consensus 287 ~----~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-----~l~~L~~L~ls~N~l~~~------~~~~~~~~L~~L~ls~N~ 351 (815)
. ..+..+++|+.|+++++.+......+|. ..++|+.|.|.+|.++.. .+....+.|..|+|++|.
T Consensus 230 s~~LakaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~ 309 (382)
T KOG1909|consen 230 SVALAKALSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNR 309 (382)
T ss_pred HHHHHHHhcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccc
Confidence 2 2356677888888888888755544443 368999999999999842 122256889999999999
Q ss_pred Cc
Q 003504 352 LS 353 (815)
Q Consensus 352 l~ 353 (815)
+.
T Consensus 310 l~ 311 (382)
T KOG1909|consen 310 LG 311 (382)
T ss_pred cc
Confidence 93
No 478
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.15 E-value=3.6e-11 Score=130.80 Aligned_cols=251 Identities=17% Similarity=0.156 Sum_probs=175.0
Q ss_pred HHhcCCCCCCeecccCCeeeEEEEc--CCCcEEEEEEeecCCcccHHHH--HHHHHHhcCC-CCCCceeeeeEEEeCCee
Q 003504 505 SATSNFDRGTLLAEGKFGPVYRGFL--PGGIHVAVKVLVHGSTLTDQEA--ARELEYLGRI-KHPNLVPLTGYCIAGDQR 579 (815)
Q Consensus 505 ~~~~~~~~~~~ig~G~~g~Vy~~~~--~~~~~vavK~l~~~~~~~~~~~--~~E~~~l~~l-~H~niv~l~g~~~~~~~~ 579 (815)
..+.+|.....||.|.|+.||+... .++..+++|.+.........+. ..|+-+...+ .|.++++....+..-+..
T Consensus 262 ~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~ 341 (524)
T KOG0601|consen 262 CKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQG 341 (524)
T ss_pred eecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccc
Confidence 3456788899999999999999874 4678899998876544433332 3566666665 488888887777777777
Q ss_pred EEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCee
Q 003504 580 IAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPII 659 (815)
Q Consensus 580 ~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~iv 659 (815)
++--||++++++.....- ...++...++++..+++.++.++| ++.++
T Consensus 342 ~ip~e~~~~~s~~l~~~~------------------------------~~~~d~~~~~~~~~q~~~~l~~i~---s~~~~ 388 (524)
T KOG0601|consen 342 YIPLEFCEGGSSSLRSVT------------------------------SQMLDEDPRLRLTAQILTALNVIH---SKLFV 388 (524)
T ss_pred cCchhhhcCcchhhhhHH------------------------------HHhcCcchhhhhHHHHHhcccccc---chhhh
Confidence 888999999988766521 223445567888999999999999 89999
Q ss_pred eccCCCCceEEcCC-CCeeecccccceecCCCCccccccccccccC-CcccCCCCCCCCCcCcchhHHHHHHHHHhCCCC
Q 003504 660 HRDIKASSVYLDMN-LEPRLSDFGLAKIFGNGLDEEIARGSPGYIP-PEFAQPDSDFPTPKSDVYCYGVVLLELITGKKP 737 (815)
Q Consensus 660 HrDlk~~NIll~~~-~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~a-PE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p 737 (815)
|+|+||+||++..+ +..+++|||.+..+.- ......+..++.| +|++..... +..+.|+||||+-+.|.+++..-
T Consensus 389 ~~d~~psni~i~~~~~~~~~~~~~~~t~~~~--~~~~~~~~~r~~p~~~~~~e~~~-~~~~~~~~sl~~~~~e~~~~~~l 465 (524)
T KOG0601|consen 389 HLDVKPSNILISNDGFFSKLGDFGCWTRLAF--SSGVFHHIDRLYPIAEILLEDYP-HLSKADIFSLGLSVDEAITGSPL 465 (524)
T ss_pred cccccccceeeccchhhhhccccccccccce--ecccccccccccccchhhccccc-cccccccccccccccccccCccc
Confidence 99999999999886 7889999999875321 1222234445552 554443332 67899999999999999997642
Q ss_pred CCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHhhh
Q 003504 738 LGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADLPLKRPSMQQIVGLLKDIE 812 (815)
Q Consensus 738 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~ 812 (815)
-. ... .|. .+........+..- .+.+.+......+++..||.+.+.....+..+
T Consensus 466 s~-~~~--------~~~-----------~i~~~~~p~~~~~~-~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~~ 519 (524)
T KOG0601|consen 466 SE-SGV--------QSL-----------TIRSGDTPNLPGLK-LQLQVLLKVMINPDRKRRPSAVELSLHSEFYR 519 (524)
T ss_pred Cc-ccc--------cce-----------eeecccccCCCchH-HhhhhhhhhhcCCccccchhhhhhcccchhhh
Confidence 11 100 000 00111111112222 66778888899999999999998876655444
No 479
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.07 E-value=1.8e-09 Score=104.85 Aligned_cols=137 Identities=11% Similarity=0.088 Sum_probs=97.2
Q ss_pred CeecccCCeeeEEEEcCC-------CcEEEEEEeecC-------------C---------cccHHHH----HHHHHHhcC
Q 003504 514 TLLAEGKFGPVYRGFLPG-------GIHVAVKVLVHG-------------S---------TLTDQEA----ARELEYLGR 560 (815)
Q Consensus 514 ~~ig~G~~g~Vy~~~~~~-------~~~vavK~l~~~-------------~---------~~~~~~~----~~E~~~l~~ 560 (815)
..||.|.-+.||.|.-.+ +..+|||+.+.. . ....+.+ ++|+..|.+
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 578999999999998553 478999987421 0 0012223 379999998
Q ss_pred CCC--CCceeeeeEEEeCCeeEEEEEeCCCCChhh-hhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHH
Q 003504 561 IKH--PNLVPLTGYCIAGDQRIAIYDYMENGNLQN-LLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRH 637 (815)
Q Consensus 561 l~H--~niv~l~g~~~~~~~~~lv~ey~~~gsL~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (815)
+.. -++.+.+++ ...++||||+.++.+.. .+.+ ..++.....
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd-------------------------------~~~~~~~~~ 127 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD-------------------------------AKLNDEEMK 127 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc-------------------------------cccCHHHHH
Confidence 853 456666654 56789999998754321 1211 112223445
Q ss_pred HHHHHHHHHHHHH-hcCCCCCeeeccCCCCceEEcCCCCeeecccccceecCC
Q 003504 638 KIALGTARALAFL-HHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGN 689 (815)
Q Consensus 638 ~i~~~ia~~L~yL-H~~~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~ 689 (815)
++..+++.+|.+| | ..++|||||++.||+++ ++.+.|+|||.+.....
T Consensus 128 ~i~~~i~~~l~~l~H---~~glVHGDLs~~NIL~~-~~~v~iIDF~qav~~~h 176 (197)
T cd05146 128 NAYYQVLSMMKQLYK---ECNLVHADLSEYNMLWH-DGKVWFIDVSQSVEPTH 176 (197)
T ss_pred HHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEE-CCcEEEEECCCceeCCC
Confidence 6788999999999 6 78999999999999997 46899999998876643
No 480
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.03 E-value=1.3e-09 Score=110.51 Aligned_cols=142 Identities=19% Similarity=0.223 Sum_probs=99.5
Q ss_pred CeecccCCeeeEEEEcCCCcEEEEEEeecCCc-ccHHHHHHHHHHhcCCCC--CCceeeeeEEEeCC---eeEEEEEeCC
Q 003504 514 TLLAEGKFGPVYRGFLPGGIHVAVKVLVHGST-LTDQEAARELEYLGRIKH--PNLVPLTGYCIAGD---QRIAIYDYME 587 (815)
Q Consensus 514 ~~ig~G~~g~Vy~~~~~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H--~niv~l~g~~~~~~---~~~lv~ey~~ 587 (815)
+.|+.|.++.||++...+|..+++|....... .....+.+|+++++.+++ .++.+++++..... ..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 57899999999999987778899998755322 134578899999999975 34567777766532 5689999999
Q ss_pred CCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcC--------------
Q 003504 588 NGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHG-------------- 653 (815)
Q Consensus 588 ~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~-------------- 653 (815)
++++.+.+.. ..++...+..++.+++++|++||+.
T Consensus 84 G~~l~~~~~~-------------------------------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~ 132 (223)
T cd05154 84 GRVLRDRLLR-------------------------------PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPG 132 (223)
T ss_pred CEecCCCCCC-------------------------------CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCC
Confidence 9888775521 0122233333444444444444411
Q ss_pred ---------------------------------------CCCCeeeccCCCCceEEcC--CCCeeeccccccee
Q 003504 654 ---------------------------------------CSPPIIHRDIKASSVYLDM--NLEPRLSDFGLAKI 686 (815)
Q Consensus 654 ---------------------------------------~~~~ivHrDlk~~NIll~~--~~~~kl~Dfgla~~ 686 (815)
....++|+|+.+.||+++. ++.+.|.||+.+..
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 133 GYLERQVARWRRQYDASRTDEPPAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred chHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 1357899999999999998 66789999997763
No 481
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.99 E-value=2.8e-10 Score=88.95 Aligned_cols=59 Identities=42% Similarity=0.581 Sum_probs=29.6
Q ss_pred CCCEEEccCCcCCccCCccccCCCCCcEEEccCCcCCCCChhhhcCCcCCCEEEcCCCc
Q 003504 77 SLKSLNLSYNRISGSLPSNIGNFGLLEVFDLSNNNFSGEIPAAISSLVSLRVLKLDGNM 135 (815)
Q Consensus 77 ~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 135 (815)
+|++|+|++|+|+.+.++.|.++++|++|+|++|+|+.+.|.+|.++++|++|+|++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 44455555555554444445555555555555555554444455555555555555544
No 482
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.97 E-value=3.9e-09 Score=98.40 Aligned_cols=131 Identities=21% Similarity=0.333 Sum_probs=98.3
Q ss_pred CeecccCCeeeEEEEcCCCcEEEEEEeecCCccc--------HHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEEEe
Q 003504 514 TLLAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLT--------DQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDY 585 (815)
Q Consensus 514 ~~ig~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~--------~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 585 (815)
..+++|+-+.+|.+.+.+ .++++|.=..+.-.. .....+|+.++.+++--.|...+=|..+.+...++|||
T Consensus 2 ~~i~~GAEa~i~~~~~~g-~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~ 80 (204)
T COG3642 2 DLIKQGAEAIIYLTDFLG-LPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY 80 (204)
T ss_pred chhhCCcceeEEeeeccC-cceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence 467899999999998764 346666432211111 12456799999888654444444466778888999999
Q ss_pred CCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCC
Q 003504 586 MENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKA 665 (815)
Q Consensus 586 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~ 665 (815)
+++-.|.+++... +..++..+-+-+.-|| ..+|||+||.+
T Consensus 81 I~G~~lkd~l~~~-------------------------------------~~~~~r~vG~~vg~lH---~~givHGDLTt 120 (204)
T COG3642 81 IEGELLKDALEEA-------------------------------------RPDLLREVGRLVGKLH---KAGIVHGDLTT 120 (204)
T ss_pred eCChhHHHHHHhc-------------------------------------chHHHHHHHHHHHHHH---hcCeecCCCcc
Confidence 9999998888641 2457777888889999 89999999999
Q ss_pred CceEEcCCCCeeeccccccee
Q 003504 666 SSVYLDMNLEPRLSDFGLAKI 686 (815)
Q Consensus 666 ~NIll~~~~~~kl~Dfgla~~ 686 (815)
+||++..+. +.++|||++..
T Consensus 121 sNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 121 SNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred ceEEEeCCc-EEEEECCcccc
Confidence 999999764 99999999874
No 483
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.97 E-value=2.9e-10 Score=134.57 Aligned_cols=103 Identities=34% Similarity=0.436 Sum_probs=53.4
Q ss_pred CCCEEECcCCC--CCCCCcccCC-CCCCCEEEccCCcCCccCCccccCCCCCcEEEccCCcCCCCChhhhcCCcCCCEEE
Q 003504 54 KLQSLDLSENN--ITALPSDLWS-LGSLKSLNLSYNRISGSLPSNIGNFGLLEVFDLSNNNFSGEIPAAISSLVSLRVLK 130 (815)
Q Consensus 54 ~L~~L~Ls~n~--l~~lp~~~~~-l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 130 (815)
.|++|-+..|. +..++..+|. ++.|++|||++|.=-+.+|+.+++|-+|++|+|++..|+ .+|..|.+|.+|.+|+
T Consensus 546 ~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~~Ln 624 (889)
T KOG4658|consen 546 KLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKKLIYLN 624 (889)
T ss_pred ccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHHHhhheec
Confidence 45555555554 4444444333 555555555555433455555555555555555555555 4555555555555555
Q ss_pred cCCCcccccCCcccccccccceeeccC
Q 003504 131 LDGNMFQWSIPPGLLNCQSLVTVDLSM 157 (815)
Q Consensus 131 L~~N~l~~~~~~~~~~l~~L~~L~l~~ 157 (815)
+..+.-...+|.....+++|++|.+..
T Consensus 625 l~~~~~l~~~~~i~~~L~~Lr~L~l~~ 651 (889)
T KOG4658|consen 625 LEVTGRLESIPGILLELQSLRVLRLPR 651 (889)
T ss_pred cccccccccccchhhhcccccEEEeec
Confidence 555543333444444455555555533
No 484
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.95 E-value=4.5e-10 Score=87.79 Aligned_cols=61 Identities=36% Similarity=0.413 Sum_probs=49.3
Q ss_pred CCCcEEEccCCcCCCCChhhhcCCcCCCEEEcCCCcccccCCcccccccccceeeccCCcC
Q 003504 100 GLLEVFDLSNNNFSGEIPAAISSLVSLRVLKLDGNMFQWSIPPGLLNCQSLVTVDLSMNQL 160 (815)
Q Consensus 100 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l 160 (815)
++|++|+|++|+|+.+.+.+|.++++|++|+|++|+|+...|+.|.++++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 4678888888888877777888888888888888888877777888888888888888875
No 485
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.95 E-value=2.4e-10 Score=130.51 Aligned_cols=247 Identities=21% Similarity=0.260 Sum_probs=163.4
Q ss_pred HhcCCCCCCeecccCCeeeEEEEcC-CCcEEEEEEeecCC---cccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEE
Q 003504 506 ATSNFDRGTLLAEGKFGPVYRGFLP-GGIHVAVKVLVHGS---TLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIA 581 (815)
Q Consensus 506 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 581 (815)
..++|.+.+.+.+|.++.++-+.-. .|...+.|+..... ....+....+-.+.-..+||-+++...-+......++
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L 881 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPL 881 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcch
Confidence 4456777788899999999877632 23233444332211 1112223333333333456777766555445678899
Q ss_pred EEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeec
Q 003504 582 IYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHR 661 (815)
Q Consensus 582 v~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHr 661 (815)
|++|..+|+|...||..... -....|--| ..+..+++||| ...++||
T Consensus 882 ~~~~~~~~~~~Skl~~~~~~-----------------------------saepaRs~i-~~~vqs~e~L~---s~~r~h~ 928 (1205)
T KOG0606|consen 882 VGHYLNGGDLPSKLHNSGCL-----------------------------SAEPARSPI-LERVQSLESLH---SSLRKHR 928 (1205)
T ss_pred hhHHhccCCchhhhhcCCCc-----------------------------ccccccchh-HHHHhhhhccc---cchhhcc
Confidence 99999999999999864200 001112222 33567899999 7779999
Q ss_pred cCCCCceEEcCCCCeeecccccceecC---------------------CC-----------CccccccccccccCCcccC
Q 003504 662 DIKASSVYLDMNLEPRLSDFGLAKIFG---------------------NG-----------LDEEIARGSPGYIPPEFAQ 709 (815)
Q Consensus 662 Dlk~~NIll~~~~~~kl~Dfgla~~~~---------------------~~-----------~~~~~~~gt~~y~aPE~~~ 709 (815)
|++|.|.+...++..+++|||.....+ .. .......||+.|.+||...
T Consensus 929 ~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~l 1008 (1205)
T KOG0606|consen 929 DLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILL 1008 (1205)
T ss_pred cccccchhhcccCCcccCccccccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccc
Confidence 999999999999999999998433211 00 0122344899999999998
Q ss_pred CCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhh
Q 003504 710 PDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYL 789 (815)
Q Consensus 710 ~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 789 (815)
+.. ....+|+|++|++++|.++|..||....++..-+++.. ..+-. ...+.....+..+++..
T Consensus 1009 g~~--hgs~ad~~~~g~~l~e~l~g~pp~na~tpq~~f~ni~~-----------~~~~~----p~g~~~~s~~aq~~~~~ 1071 (1205)
T KOG0606|consen 1009 GRR--HGSAADWWSSGVCLFEVLTGIPPFNAETPQQIFENILN-----------RDIPW----PEGPEEGSYEAQDLINR 1071 (1205)
T ss_pred ccc--CCCcchhhhhhhhhhhhhcCCCCCCCcchhhhhhcccc-----------CCCCC----CCCccccChhhhhhhhh
Confidence 877 47789999999999999999999987666544322221 11111 12245566678888888
Q ss_pred ccccCCCCCCCHH
Q 003504 790 CTADLPLKRPSMQ 802 (815)
Q Consensus 790 Cl~~dP~~RPs~~ 802 (815)
.+..+|.+|-.|.
T Consensus 1072 ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1072 LLTEEPTQRLGAK 1084 (1205)
T ss_pred hhccCchhccCcc
Confidence 9999999998665
No 486
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.91 E-value=1.4e-09 Score=128.84 Aligned_cols=152 Identities=24% Similarity=0.361 Sum_probs=120.4
Q ss_pred ccCCCCCCEEECcCCCCCCCCcccCCCCCCCEEEccCCc--CCccCCccccCCCCCcEEEccCCcCCCCChhhhcCCcCC
Q 003504 49 IGKLSKLQSLDLSENNITALPSDLWSLGSLKSLNLSYNR--ISGSLPSNIGNFGLLEVFDLSNNNFSGEIPAAISSLVSL 126 (815)
Q Consensus 49 ~~~l~~L~~L~Ls~n~l~~lp~~~~~l~~L~~L~L~~N~--i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 126 (815)
.......+...+-+|++..++.... .++|++|-+..|. +..+.++.|..++.|++|||++|.=-+.+|..+++|.+|
T Consensus 519 ~~~~~~~rr~s~~~~~~~~~~~~~~-~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~L 597 (889)
T KOG4658|consen 519 VKSWNSVRRMSLMNNKIEHIAGSSE-NPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHL 597 (889)
T ss_pred ccchhheeEEEEeccchhhccCCCC-CCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhh
Confidence 4556788999999999998875443 3489999999996 665666678999999999999988667999999999999
Q ss_pred CEEEcCCCcccccCCcccccccccceeeccCCcCCCCCCchhhccCCCCCEEEcCCCcccCCCC---CCCCCCCCCeEec
Q 003504 127 RVLKLDGNMFQWSIPPGLLNCQSLVTVDLSMNQLNGSLPDGFGAAFPKLKSLNLAGNEIKGRDT---HFAGLKSITNLNI 203 (815)
Q Consensus 127 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~~---~~~~l~~L~~L~L 203 (815)
++|+|++..++ .+|..+.+|++|.+|++..+.-...+ ..+...+.+|++|.|..-....... .+..|.+|+.|..
T Consensus 598 ryL~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~-~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~ 675 (889)
T KOG4658|consen 598 RYLDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESI-PGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSI 675 (889)
T ss_pred hcccccCCCcc-ccchHHHHHHhhheeccccccccccc-cchhhhcccccEEEeeccccccchhhHHhhhcccchhhhee
Confidence 99999999999 79999999999999999998765355 4444669999999998877333222 2344444444444
No 487
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.86 E-value=1.5e-08 Score=93.88 Aligned_cols=143 Identities=20% Similarity=0.259 Sum_probs=100.6
Q ss_pred CCCeecccCCeeeEEEEcCCCcEEEEE-EeecCC-------cccHHHHHHHHHHhcCCCCCCceeeeeEEEeCCeeEEEE
Q 003504 512 RGTLLAEGKFGPVYRGFLPGGIHVAVK-VLVHGS-------TLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIY 583 (815)
Q Consensus 512 ~~~~ig~G~~g~Vy~~~~~~~~~vavK-~l~~~~-------~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 583 (815)
....+-+|+-+.|+++.+. |+...|| ++.+.. ....+...+|++++.+++--.|.-..=++.+...-.++|
T Consensus 11 ~l~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 3578889999999999987 5555555 333221 112345678999999886444444444666777778999
Q ss_pred EeCCC-CChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecc
Q 003504 584 DYMEN-GNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRD 662 (815)
Q Consensus 584 ey~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrD 662 (815)
||+++ -++.+++...- +. ...-.-....+..|-+.+.-|| ...|||+|
T Consensus 90 E~~~g~~~vk~~i~~~~---------------------------~~-~~~d~~~~~~~~~iG~~igklH---~ndiiHGD 138 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTM---------------------------ED-ESEDEGLAELARRIGELIGKLH---DNDIIHGD 138 (229)
T ss_pred EeccchhHHHHHHHHHc---------------------------cC-cccchhHHHHHHHHHHHHHHhh---hCCeeccc
Confidence 99987 47888876420 00 1111112567888888999999 88999999
Q ss_pred CCCCceEEcCCCC---eeeccccccee
Q 003504 663 IKASSVYLDMNLE---PRLSDFGLAKI 686 (815)
Q Consensus 663 lk~~NIll~~~~~---~kl~Dfgla~~ 686 (815)
|..+||++..++. +.++|||++..
T Consensus 139 LTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 139 LTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred ccccceEEecCCCcCceEEEeecchhc
Confidence 9999999976653 58999998863
No 488
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.78 E-value=1.2e-07 Score=101.18 Aligned_cols=180 Identities=18% Similarity=0.228 Sum_probs=132.1
Q ss_pred CeeeEEEE-cCCCcEEEEEEeecCCcccHHHHHHHHHHhcCCCCCCceeeeeEEEe----CCeeEEEEEeCCCC-Chhhh
Q 003504 521 FGPVYRGF-LPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIA----GDQRIAIYDYMENG-NLQNL 594 (815)
Q Consensus 521 ~g~Vy~~~-~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~----~~~~~lv~ey~~~g-sL~~~ 594 (815)
..+.||+. ..||..++.|+++............-+++.+++.|+|+|++..++.. +...++||+|.|+. +|.+.
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~ 368 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDL 368 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHH
Confidence 35789998 56899999999954433333344456788899999999999998863 34678999999874 78776
Q ss_pred hccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCceEEcCCC
Q 003504 595 LHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNL 674 (815)
Q Consensus 595 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrDlk~~NIll~~~~ 674 (815)
-...++.... .-.....++........+.++.|++.||.++| +.|+.-+-|.+++|+++.+.
T Consensus 369 ~F~~~~~t~~---------------~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIH---ssGLAck~L~~~kIlv~G~~ 430 (655)
T KOG3741|consen 369 YFANPPFTKR---------------TNSFYPSQNLKAPEEVLWSYISQLTAALYSIH---SSGLACKTLDLKKILVTGKM 430 (655)
T ss_pred HccCCccccc---------------cccccccCCCCchHHHHHHHHHHHHHHHHHHH---hcCceeecccHhHeEeeCcc
Confidence 5543221100 00011233455677788899999999999999 78898899999999999999
Q ss_pred CeeecccccceecCCCCccccccccccccCCcccCCCCCCCCCcCcchhHHHHHHHHHhCCC
Q 003504 675 EPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDSDFPTPKSDVYCYGVVLLELITGKK 736 (815)
Q Consensus 675 ~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dv~S~Gvvl~el~tg~~ 736 (815)
+++|+..|.......+.. |.+.. -.+-|.-.||.+++.|.+|..
T Consensus 431 RIriS~C~i~Dvl~~d~~-------------~~le~-----~Qq~D~~~lG~ll~aLAt~~~ 474 (655)
T KOG3741|consen 431 RIRISGCGIMDVLQEDPT-------------EPLES-----QQQNDLRDLGLLLLALATGTE 474 (655)
T ss_pred eEEEecccceeeecCCCC-------------cchhH-----HhhhhHHHHHHHHHHHhhccc
Confidence 999999998876654320 11221 236789999999999999864
No 489
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.77 E-value=7.3e-08 Score=99.94 Aligned_cols=270 Identities=16% Similarity=0.138 Sum_probs=162.5
Q ss_pred CCCCeecccCCeeeEEEEcCCCcEEEEEEeecCCcccHHHHHHHHHHhcCC-CCCCceeeeeEEE------eCC-eeEEE
Q 003504 511 DRGTLLAEGKFGPVYRGFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRI-KHPNLVPLTGYCI------AGD-QRIAI 582 (815)
Q Consensus 511 ~~~~~ig~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~------~~~-~~~lv 582 (815)
..+..+|+|+-+.+|-.--- ..-+.|++.......+.+- ++.|... .||-+-.=+.+=. +.. ..-++
T Consensus 14 ~~gr~LgqGgea~ly~l~e~--~d~VAKIYh~Pppa~~aqk---~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGfl 88 (637)
T COG4248 14 PPGRPLGQGGEADLYTLGEV--RDQVAKIYHAPPPAAQAQK---VAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFL 88 (637)
T ss_pred CCCccccCCccceeeecchh--hchhheeecCCCchHHHHH---HHHhccCCCCcchhhhhcccHHHhhCCCccceeEEe
Confidence 34788999999999954211 1235577765433333322 2333333 4664433111110 111 24456
Q ss_pred EEeCCCC-ChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCCCeeec
Q 003504 583 YDYMENG-NLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHR 661 (815)
Q Consensus 583 ~ey~~~g-sL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~~~~~ivHr 661 (815)
|..+++. -...++. ..+. -..-...+|.+.++.+..+|.+-+.|| ..|.+-+
T Consensus 89 mP~v~g~~pI~~~y~------------------p~tR------Rqs~P~~~w~fllrvaRnlA~aFA~lH---~~Gh~vG 141 (637)
T COG4248 89 MPKVSGKEPIHMIYS------------------PATR------RQSYPHCAWDFLLRVARNLASAFATLH---EHGHVVG 141 (637)
T ss_pred cccCCCccchhhhcC------------------chhh------cccCCccccHHHHHHHHHHHHHHHHHH---hcCCccc
Confidence 6666553 1111111 0000 011335789999999999999999999 8899999
Q ss_pred cCCCCceEEcCCCCeeecccccceecCCCCccccccccccccCCcccCCCC---CCCCCcCcchhHHHHHHHHHhC-CCC
Q 003504 662 DIKASSVYLDMNLEPRLSDFGLAKIFGNGLDEEIARGSPGYIPPEFAQPDS---DFPTPKSDVYCYGVVLLELITG-KKP 737 (815)
Q Consensus 662 Dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~~~Dv~S~Gvvl~el~tg-~~p 737 (815)
|+.++|+|+++++.+.+.|=..-....++......+|...|.+||.-.-.. ...+...|-|.+||++++++.| +.|
T Consensus 142 DVn~~~~lVsd~~~V~LVdsDsfqi~~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHP 221 (637)
T COG4248 142 DVNQNSFLVSDDSKVVLVDSDSFQINANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHP 221 (637)
T ss_pred ccCccceeeecCceEEEEcccceeeccCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCC
Confidence 999999999999999999865444444554555566889999999754111 1137789999999999999985 999
Q ss_pred CCCCCCcc-----ccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhhccccC--CCCCCCHHHHHHHHHh
Q 003504 738 LGDDYPEE-----KEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYLCTADL--PLKRPSMQQIVGLLKD 810 (815)
Q Consensus 738 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~d--P~~RPs~~~v~~~L~~ 810 (815)
|.+-.... .+..+....-.+.... ..-..|.-..-...-.+..+..+...|+... |.-||+++.-+..|.+
T Consensus 222 ysGI~~~~~ap~p~E~~Ia~g~f~ya~~~--~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~a 299 (637)
T COG4248 222 YSGIPLISDAPNPLETDIAHGRFAYASDQ--RRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDA 299 (637)
T ss_pred CCcccccCCCCCcchhhhhcceeeechhc--cCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Confidence 98732111 1112221110011111 1111111111112334567888889999865 4579999999998887
Q ss_pred hhhc
Q 003504 811 IEST 814 (815)
Q Consensus 811 i~~~ 814 (815)
++++
T Consensus 300 l~~~ 303 (637)
T COG4248 300 LRQQ 303 (637)
T ss_pred HHHh
Confidence 7653
No 490
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.74 E-value=6.5e-08 Score=93.72 Aligned_cols=126 Identities=23% Similarity=0.307 Sum_probs=80.5
Q ss_pred eeEEEEcCCCcEEEEEEeecCCc-------------c---------c----HHHHHHHHHHhcCCCCC--CceeeeeEEE
Q 003504 523 PVYRGFLPGGIHVAVKVLVHGST-------------L---------T----DQEAARELEYLGRIKHP--NLVPLTGYCI 574 (815)
Q Consensus 523 ~Vy~~~~~~~~~vavK~l~~~~~-------------~---------~----~~~~~~E~~~l~~l~H~--niv~l~g~~~ 574 (815)
.||.|...+|..||||+.+.... . . ....++|.+.|.++..- ++.+.+++
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~-- 78 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDY-- 78 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEE--
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEE--
Confidence 38999998999999998753200 0 0 12356899999999755 45566544
Q ss_pred eCCeeEEEEEeCC--CCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHH-Hh
Q 003504 575 AGDQRIAIYDYME--NGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAF-LH 651 (815)
Q Consensus 575 ~~~~~~lv~ey~~--~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~y-LH 651 (815)
....+||||++ +..+.. |... .++......++.++...+.. +|
T Consensus 79 --~~~~ivME~I~~~G~~~~~-l~~~-------------------------------~~~~~~~~~~~~~il~~~~~~~~ 124 (188)
T PF01163_consen 79 --NRNVIVMEYIGEDGVPLPR-LKDV-------------------------------DLSPEEPKELLEEILEEIIKMLH 124 (188)
T ss_dssp --ETTEEEEE--EETTEEGGC-HHHC-------------------------------GGGGSTHHHHHHHHHHHHHHHHH
T ss_pred --eCCEEEEEecCCCccchhh-HHhc-------------------------------cccchhHHHHHHHHHHHHHHHHH
Confidence 24579999999 544433 3221 00011234567777775665 46
Q ss_pred cCCCCCeeeccCCCCceEEcCCCCeeecccccceecC
Q 003504 652 HGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFG 688 (815)
Q Consensus 652 ~~~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~ 688 (815)
..+|||+||.+.||+++++ .+.|+|||.+....
T Consensus 125 ---~~givHGDLs~~NIlv~~~-~~~iIDf~qav~~~ 157 (188)
T PF01163_consen 125 ---KAGIVHGDLSEYNILVDDG-KVYIIDFGQAVDSS 157 (188)
T ss_dssp ---CTTEEESS-STTSEEEETT-CEEE--GTTEEETT
T ss_pred ---hcCceecCCChhhEEeecc-eEEEEecCcceecC
Confidence 7899999999999999988 99999999887654
No 491
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.74 E-value=1.1e-09 Score=106.56 Aligned_cols=217 Identities=25% Similarity=0.314 Sum_probs=128.3
Q ss_pred ccCCCCCCEEECcCCCCCC-----CCcccCCCCCCCEEEccCCcCC---ccCCccccCCCCCcEEEccCCcCCCCChhhh
Q 003504 49 IGKLSKLQSLDLSENNITA-----LPSDLWSLGSLKSLNLSYNRIS---GSLPSNIGNFGLLEVFDLSNNNFSGEIPAAI 120 (815)
Q Consensus 49 ~~~l~~L~~L~Ls~n~l~~-----lp~~~~~l~~L~~L~L~~N~i~---~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 120 (815)
+.-+..++.+|||+|.|.+ +...+.+-.+|+..+++.-... +.+++.+. .+-.++
T Consensus 26 l~~~d~~~evdLSGNtigtEA~e~l~~~ia~~~~L~vvnfsd~ftgr~kde~~~~L~-----------------~Ll~aL 88 (388)
T COG5238 26 LEMMDELVEVDLSGNTIGTEAMEELCNVIANVRNLRVVNFSDAFTGRDKDELYSNLV-----------------MLLKAL 88 (388)
T ss_pred HHhhcceeEEeccCCcccHHHHHHHHHHHhhhcceeEeehhhhhhcccHHHHHHHHH-----------------HHHHHH
Confidence 3346677777777777762 3334444556666666543222 11111110 112234
Q ss_pred cCCcCCCEEEcCCCcccccCCccc----ccccccceeeccCCcCCCCCCch-hh------------ccCCCCCEEEcCCC
Q 003504 121 SSLVSLRVLKLDGNMFQWSIPPGL----LNCQSLVTVDLSMNQLNGSLPDG-FG------------AAFPKLKSLNLAGN 183 (815)
Q Consensus 121 ~~l~~L~~L~L~~N~l~~~~~~~~----~~l~~L~~L~l~~N~l~~~lp~~-~~------------~~l~~L~~L~L~~N 183 (815)
.++++|+..+||.|.|....|+.+ +.-+.|..|.|++|.+- .+... ++ ..-|.|+......|
T Consensus 89 lkcp~l~~v~LSDNAfg~~~~e~L~d~is~~t~l~HL~l~NnGlG-p~aG~rigkal~~la~nKKaa~kp~Le~vicgrN 167 (388)
T COG5238 89 LKCPRLQKVDLSDNAFGSEFPEELGDLISSSTDLVHLKLNNNGLG-PIAGGRIGKALFHLAYNKKAADKPKLEVVICGRN 167 (388)
T ss_pred hcCCcceeeeccccccCcccchHHHHHHhcCCCceeEEeecCCCC-ccchhHHHHHHHHHHHHhhhccCCCceEEEeccc
Confidence 445555555555555544444322 23445556666655553 22211 11 23467888888888
Q ss_pred cccCCCC-----CCCCCCCCCeEeccCCcCCCcchhh--h-----hcccceeeeccccccCcccccccccccCCccceEE
Q 003504 184 EIKGRDT-----HFAGLKSITNLNISGNLFQGSVMGV--F-----LESLEVIDLRSNQFQGHISQVQFNSSYNWSRLVYV 251 (815)
Q Consensus 184 ~l~~~~~-----~~~~l~~L~~L~Ls~N~l~~~~~~~--~-----l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~L~~L 251 (815)
++...+. .|..-.+|+++.+..|.|..-.... | +.+|+.|||+.|-++-..+.........|+.|+.|
T Consensus 168 Rlengs~~~~a~~l~sh~~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~La~al~~W~~lrEL 247 (388)
T COG5238 168 RLENGSKELSAALLESHENLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYLADALCEWNLLREL 247 (388)
T ss_pred hhccCcHHHHHHHHHhhcCceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHHHHHHHhcccchhhhc
Confidence 8876442 2344468889999999886543222 2 67899999999998877766666677788888888
Q ss_pred EcCCCccCcchhhccc------cCCCCCEEEecCCcCc
Q 003504 252 DLSENQLSGEIFHNFS------QAQNLKHLSLAYNRFT 283 (815)
Q Consensus 252 ~Ls~N~l~~~~~~~~~------~l~~L~~L~L~~N~l~ 283 (815)
.+..|-++......+- ..++|+.|-+.+|-+.
T Consensus 248 ~lnDClls~~G~~~v~~~f~e~~~p~l~~L~~~Yne~~ 285 (388)
T COG5238 248 RLNDCLLSNEGVKSVLRRFNEKFVPNLMPLPGDYNERR 285 (388)
T ss_pred cccchhhccccHHHHHHHhhhhcCCCccccccchhhhc
Confidence 8888888765544332 2467777777777663
No 492
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.71 E-value=2.8e-10 Score=124.27 Aligned_cols=177 Identities=27% Similarity=0.269 Sum_probs=126.8
Q ss_pred cccCCCCCCEEECcCCCCCCCCcccCCC-CCCCEEEccCCcCC---ccCCccccCC------CCCcEEEccCCcCCCCCh
Q 003504 48 TIGKLSKLQSLDLSENNITALPSDLWSL-GSLKSLNLSYNRIS---GSLPSNIGNF------GLLEVFDLSNNNFSGEIP 117 (815)
Q Consensus 48 ~~~~l~~L~~L~Ls~n~l~~lp~~~~~l-~~L~~L~L~~N~i~---~~~~~~~~~l------~~L~~L~Ls~N~l~~~~p 117 (815)
.+..+..|++|.|.++.|.... ++..+ .+|++| +-+|.+. .++....+.. -.|..-+.+.|.+. ...
T Consensus 104 ~ifpF~sLr~LElrg~~L~~~~-GL~~lr~qLe~L-IC~~Sl~Al~~v~ascggd~~ns~~Wn~L~~a~fsyN~L~-~mD 180 (1096)
T KOG1859|consen 104 SIFPFRSLRVLELRGCDLSTAK-GLQELRHQLEKL-ICHNSLDALRHVFASCGGDISNSPVWNKLATASFSYNRLV-LMD 180 (1096)
T ss_pred eeccccceeeEEecCcchhhhh-hhHHHHHhhhhh-hhhccHHHHHHHHHHhccccccchhhhhHhhhhcchhhHH-hHH
Confidence 3555667777777777776532 33332 345555 3344433 1111111111 24778888999998 667
Q ss_pred hhhcCCcCCCEEEcCCCcccccCCcccccccccceeeccCCcCCCCCCchhhccCCCCCEEEcCCCcccCCCCCCCCCCC
Q 003504 118 AAISSLVSLRVLKLDGNMFQWSIPPGLLNCQSLVTVDLSMNQLNGSLPDGFGAAFPKLKSLNLAGNEIKGRDTHFAGLKS 197 (815)
Q Consensus 118 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~ 197 (815)
.++.=++.|+.|+|++|+++.. +.+..|+.|+.|||+.|.+. .+|.--..+ .+|..|.|++|.++.+- .+.+|.+
T Consensus 181 ~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~-~vp~l~~~g-c~L~~L~lrnN~l~tL~-gie~Lks 255 (1096)
T KOG1859|consen 181 ESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLR-HVPQLSMVG-CKLQLLNLRNNALTTLR-GIENLKS 255 (1096)
T ss_pred HHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhc-cccccchhh-hhheeeeecccHHHhhh-hHHhhhh
Confidence 8888899999999999999853 37888999999999999998 887643333 35999999999998753 4678899
Q ss_pred CCeEeccCCcCCCcchhhh---hcccceeeeccccccC
Q 003504 198 ITNLNISGNLFQGSVMGVF---LESLEVIDLRSNQFQG 232 (815)
Q Consensus 198 L~~L~Ls~N~l~~~~~~~~---l~~L~~L~L~~N~l~~ 232 (815)
|..|||++|.|.+.....+ +..|..|.|.+|.+-.
T Consensus 256 L~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c 293 (1096)
T KOG1859|consen 256 LYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCC 293 (1096)
T ss_pred hhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCcccc
Confidence 9999999999877554444 7789999999998754
No 493
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.69 E-value=1.5e-07 Score=96.80 Aligned_cols=142 Identities=18% Similarity=0.121 Sum_probs=99.2
Q ss_pred CCeecccCCeeeEEEEcCCCcEEEEEEeecCCcc-----------cHHHHHHHHHHhcCCCCCC--ceeeeeEEEe----
Q 003504 513 GTLLAEGKFGPVYRGFLPGGIHVAVKVLVHGSTL-----------TDQEAARELEYLGRIKHPN--LVPLTGYCIA---- 575 (815)
Q Consensus 513 ~~~ig~G~~g~Vy~~~~~~~~~vavK~l~~~~~~-----------~~~~~~~E~~~l~~l~H~n--iv~l~g~~~~---- 575 (815)
++.+-......|+++.+. |+.+.||........ ....+.+|...+.++...+ ..+.+++...
T Consensus 27 ~e~v~~~~~rrvvr~~~~-g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~ 105 (268)
T PRK15123 27 GEVFRELEGRRTLRFELA-GKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNP 105 (268)
T ss_pred CcEEecCCCceEEEEEEC-CEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCC
Confidence 345554555557777664 678999977432211 1114778988888774322 3344555543
Q ss_pred -CCeeEEEEEeCCCC-ChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHHHHHHHhcC
Q 003504 576 -GDQRIAIYDYMENG-NLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTARALAFLHHG 653 (815)
Q Consensus 576 -~~~~~lv~ey~~~g-sL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~~L~yLH~~ 653 (815)
....++|+|++++- +|.+++.... ....+...+..++.+++..+.-||
T Consensus 106 ~~~~s~LVte~l~~~~sL~~~~~~~~----------------------------~~~~~~~~~~~ll~~la~~i~~LH-- 155 (268)
T PRK15123 106 ATRTSFIITEDLAPTISLEDYCADWA----------------------------TNPPDPRLKRMLIKRVATMVRDMH-- 155 (268)
T ss_pred ccceeEEEEeeCCCCccHHHHHHhhc----------------------------ccCCCHHHHHHHHHHHHHHHHHHH--
Confidence 23568999999986 8988875310 112334556789999999999999
Q ss_pred CCCCeeeccCCCCceEEcC-------CCCeeeccccccee
Q 003504 654 CSPPIIHRDIKASSVYLDM-------NLEPRLSDFGLAKI 686 (815)
Q Consensus 654 ~~~~ivHrDlk~~NIll~~-------~~~~kl~Dfgla~~ 686 (815)
..+|+|+|++++|||++. ++.+.++||+.++.
T Consensus 156 -~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~~ 194 (268)
T PRK15123 156 -AAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQI 194 (268)
T ss_pred -HCcCccCCCChhhEEEeccccCCCCCceEEEEECCcccc
Confidence 899999999999999985 46799999998864
No 494
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.67 E-value=3.4e-09 Score=104.55 Aligned_cols=62 Identities=19% Similarity=0.147 Sum_probs=29.9
Q ss_pred ccceEEEcCCCccCcch-hhccccCCCCCEEEecCCcCcCCC-ccccccccCCCeEecCCCcCc
Q 003504 246 SRLVYVDLSENQLSGEI-FHNFSQAQNLKHLSLAYNRFTRQE-FPQIGTLLGLEHLNLSRTSLI 307 (815)
Q Consensus 246 ~~L~~L~Ls~N~l~~~~-~~~~~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~Ls~N~l~ 307 (815)
+++..+.+..|.|.... .+.+..++.+..|+|+.|+|.+.. ..++..++.|..|.+++|++.
T Consensus 199 pnv~sv~v~e~PlK~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~ 262 (418)
T KOG2982|consen 199 PNVNSVFVCEGPLKTESSEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLS 262 (418)
T ss_pred ccchheeeecCcccchhhcccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCccc
Confidence 45555555555554322 233444455555666666654322 223444555555555555543
No 495
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.64 E-value=1.1e-08 Score=112.86 Aligned_cols=149 Identities=19% Similarity=0.261 Sum_probs=102.2
Q ss_pred HHHHHHHHHHHhcCCCCCeeeccCCCCceEEcCCCCeeecccccceecCCCCc-----c-----ccccccccccCCcccC
Q 003504 640 ALGTARALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKIFGNGLD-----E-----EIARGSPGYIPPEFAQ 709 (815)
Q Consensus 640 ~~~ia~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~~-----~-----~~~~gt~~y~aPE~~~ 709 (815)
+.+++.||.|+|. +.++||++|.|++|.+++.+..||+.|+.+.....+.. . ........|.|||++.
T Consensus 105 l~~v~dgl~flh~--sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~ 182 (700)
T KOG2137|consen 105 LGNVADGLAFLHR--SAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLL 182 (700)
T ss_pred hhcccchhhhhcc--CcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhc
Confidence 3456799999997 78999999999999999999999999998876543211 0 0111355799999998
Q ss_pred CCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCCccccccHHHHHHHHHhcCCCCccccccccCCCCHHHHHHHHHHHhh
Q 003504 710 PDSDFPTPKSDVYCYGVVLLELITGKKPLGDDYPEEKEGNLVSWVRGLVRNNKGSRAIDPKIRDTGPEKQMEEALKIGYL 789 (815)
Q Consensus 710 ~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 789 (815)
... .+.++|+||+||++|.+..|..+....... ...+-.... ..+-... -...+.+.++.+-+.+
T Consensus 183 ~~~--~~~~sd~fSlG~li~~i~~~gk~i~~a~~~-----~~~~~~~~~-------~~~~~~~-~~s~~~p~el~~~l~k 247 (700)
T KOG2137|consen 183 GTT--NTPASDVFSLGVLIYTIYNGGKSIIAANGG-----LLSYSFSRN-------LLNAGAF-GYSNNLPSELRESLKK 247 (700)
T ss_pred ccc--ccccccceeeeeEEEEEecCCcchhhccCC-----cchhhhhhc-------ccccccc-cccccCcHHHHHHHHH
Confidence 855 689999999999999999655443221111 110000000 0001111 1135567788888899
Q ss_pred ccccCCCCCCCHHHHH
Q 003504 790 CTADLPLKRPSMQQIV 805 (815)
Q Consensus 790 Cl~~dP~~RPs~~~v~ 805 (815)
.+..++.-||++.++.
T Consensus 248 ~l~~~~~~rp~~~~l~ 263 (700)
T KOG2137|consen 248 LLNGDSAVRPTLDLLL 263 (700)
T ss_pred HhcCCcccCcchhhhh
Confidence 9999999999776664
No 496
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.63 E-value=6.3e-09 Score=102.65 Aligned_cols=108 Identities=27% Similarity=0.339 Sum_probs=64.3
Q ss_pred CCCCEEECcCCCCCCCCcc--cC-CCCCCCEEEccCCcCCc--cCCccccCCCCCcEEEccCCcCCCCChhhhcCCcCCC
Q 003504 53 SKLQSLDLSENNITALPSD--LW-SLGSLKSLNLSYNRISG--SLPSNIGNFGLLEVFDLSNNNFSGEIPAAISSLVSLR 127 (815)
Q Consensus 53 ~~L~~L~Ls~n~l~~lp~~--~~-~l~~L~~L~L~~N~i~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 127 (815)
.-++.|-+.++.|...... +. ..+.+++|||.+|.|++ .+-..+.+|+.|+.|+|+.|.++..+-..-..+.+|+
T Consensus 45 ra~ellvln~~~id~~gd~~~~~~~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~ 124 (418)
T KOG2982|consen 45 RALELLVLNGSIIDNEGDVMLFGSSVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLR 124 (418)
T ss_pred cchhhheecCCCCCcchhHHHHHHHhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceE
Confidence 3445566666666654331 22 25667777777777774 2333456677777777777777644322224556777
Q ss_pred EEEcCCCcccccCCcc-cccccccceeeccCCcC
Q 003504 128 VLKLDGNMFQWSIPPG-LLNCQSLVTVDLSMNQL 160 (815)
Q Consensus 128 ~L~L~~N~l~~~~~~~-~~~l~~L~~L~l~~N~l 160 (815)
+|.|.+..+.+.-.+. +..++.++.|++|.|.+
T Consensus 125 ~lVLNgT~L~w~~~~s~l~~lP~vtelHmS~N~~ 158 (418)
T KOG2982|consen 125 VLVLNGTGLSWTQSTSSLDDLPKVTELHMSDNSL 158 (418)
T ss_pred EEEEcCCCCChhhhhhhhhcchhhhhhhhccchh
Confidence 7777777666544333 34566777777777644
No 497
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.57 E-value=8.1e-10 Score=120.79 Aligned_cols=129 Identities=29% Similarity=0.280 Sum_probs=88.5
Q ss_pred CCCEEECcCCCCCCCCcccCCCCCCCEEEccCCcCCccCCccccCCCCCcEEEccCCcCCCCChhhhcCCcCCCEEEcCC
Q 003504 54 KLQSLDLSENNITALPSDLWSLGSLKSLNLSYNRISGSLPSNIGNFGLLEVFDLSNNNFSGEIPAAISSLVSLRVLKLDG 133 (815)
Q Consensus 54 ~L~~L~Ls~n~l~~lp~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 133 (815)
.|...+.+.|.++.+...+.-++.|+.|||++|+++.. +.+..+++|++|||++|+++.+.--...++. |+.|.|++
T Consensus 165 ~L~~a~fsyN~L~~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~-L~~L~lrn 241 (1096)
T KOG1859|consen 165 KLATASFSYNRLVLMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLRHVPQLSMVGCK-LQLLNLRN 241 (1096)
T ss_pred hHhhhhcchhhHHhHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhccccccchhhhh-heeeeecc
Confidence 46667777777777777777777788888888887744 3677777888888888887744333333444 78888888
Q ss_pred CcccccCCcccccccccceeeccCCcCCCCCCchhhccCCCCCEEEcCCCcccC
Q 003504 134 NMFQWSIPPGLLNCQSLVTVDLSMNQLNGSLPDGFGAAFPKLKSLNLAGNEIKG 187 (815)
Q Consensus 134 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~ 187 (815)
|.++.. ..+.+|++|+.|||++|-|.+.-.-.+...+..|+.|.|.+|.+-.
T Consensus 242 N~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c 293 (1096)
T KOG1859|consen 242 NALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCC 293 (1096)
T ss_pred cHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCcccc
Confidence 877732 3467777788888888877654433444456677777777777644
No 498
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.47 E-value=8.9e-09 Score=90.14 Aligned_cols=125 Identities=27% Similarity=0.388 Sum_probs=89.8
Q ss_pred CcEEEccCCcCCCCChhhh---cCCcCCCEEEcCCCcccccCCcccc-cccccceeeccCCcCCCCCCchhhccCCCCCE
Q 003504 102 LEVFDLSNNNFSGEIPAAI---SSLVSLRVLKLDGNMFQWSIPPGLL-NCQSLVTVDLSMNQLNGSLPDGFGAAFPKLKS 177 (815)
Q Consensus 102 L~~L~Ls~N~l~~~~p~~~---~~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~ 177 (815)
+..|||++++|- -++++. .....|+..+|++|.+. ..|+.|. ..+.+++|+|++|.|+ .+|.++ ..++.|+.
T Consensus 29 ~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~-Aam~aLr~ 104 (177)
T KOG4579|consen 29 LHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEEL-AAMPALRS 104 (177)
T ss_pred hhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHH-hhhHHhhh
Confidence 455677777665 334443 44456666788888888 4666664 4457888888888887 888884 66888888
Q ss_pred EEcCCCcccCCCCCCCCCCCCCeEeccCCcCCCcchhhhhcccc-eeeeccccc
Q 003504 178 LNLAGNEIKGRDTHFAGLKSITNLNISGNLFQGSVMGVFLESLE-VIDLRSNQF 230 (815)
Q Consensus 178 L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~L~-~L~L~~N~l 230 (815)
|+++.|.+...+..+..|.+|-.|+..+|.+..++...|.+++. ..++.++.+
T Consensus 105 lNl~~N~l~~~p~vi~~L~~l~~Lds~~na~~eid~dl~~s~~~al~~lgnepl 158 (177)
T KOG4579|consen 105 LNLRFNPLNAEPRVIAPLIKLDMLDSPENARAEIDVDLFYSSLPALIKLGNEPL 158 (177)
T ss_pred cccccCccccchHHHHHHHhHHHhcCCCCccccCcHHHhccccHHHHHhcCCcc
Confidence 88888888888877777888889999999988888887644433 334444443
No 499
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.45 E-value=1.2e-06 Score=86.96 Aligned_cols=135 Identities=22% Similarity=0.209 Sum_probs=93.7
Q ss_pred CCCCCeecccCCeeeEEEEcCCCcEEEEEEeecCCc----------------------ccHHHHHHHHHHhcCCCCC--C
Q 003504 510 FDRGTLLAEGKFGPVYRGFLPGGIHVAVKVLVHGST----------------------LTDQEAARELEYLGRIKHP--N 565 (815)
Q Consensus 510 ~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~l~~~~~----------------------~~~~~~~~E~~~l~~l~H~--n 565 (815)
..++..||-|.-+.||.|..+.|.++|||.-+.+.. ......++|.++|++|.-. .
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 456789999999999999999999999997643211 0112356899999999644 6
Q ss_pred ceeeeeEEEeCCeeEEEEEeCCCCChhhhhccCCCCCccccCCCCCccccCCCccccccCCCCcccCHHHHHHHHHHHHH
Q 003504 566 LVPLTGYCIAGDQRIAIYDYMENGNLQNLLHDLPLGVQTTEDWSTDTWEEDGTNSIQNVGSEGLLTTWRFRHKIALGTAR 645 (815)
Q Consensus 566 iv~l~g~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~ 645 (815)
+.+.++ .+...+||||+++--|...=- +-...-.|+..|.+
T Consensus 173 VP~P~~----~nRHaVvMe~ieG~eL~~~r~-----------------------------------~~en~~~il~~il~ 213 (304)
T COG0478 173 VPKPIA----WNRHAVVMEYIEGVELYRLRL-----------------------------------DVENPDEILDKILE 213 (304)
T ss_pred CCCccc----cccceeeeehcccceeecccC-----------------------------------cccCHHHHHHHHHH
Confidence 666655 346689999999855533210 00111123333333
Q ss_pred HHHHHhcCCCCCeeeccCCCCceEEcCCCCeeeccccccee
Q 003504 646 ALAFLHHGCSPPIIHRDIKASSVYLDMNLEPRLSDFGLAKI 686 (815)
Q Consensus 646 ~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~ 686 (815)
-+.-.- ..||||+|+.+-||++++||.+.++||--+..
T Consensus 214 ~~~~~~---~~GiVHGDlSefNIlV~~dg~~~vIDwPQ~v~ 251 (304)
T COG0478 214 EVRKAY---RRGIVHGDLSEFNILVTEDGDIVVIDWPQAVP 251 (304)
T ss_pred HHHHHH---HcCccccCCchheEEEecCCCEEEEeCccccc
Confidence 333333 46799999999999999999999999975543
No 500
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.41 E-value=7.5e-08 Score=94.01 Aligned_cols=199 Identities=21% Similarity=0.247 Sum_probs=99.3
Q ss_pred cccccccccceeeccCCcCCCCCCchhh---ccCCCCCEEEcCCCcccCCCC-CC-------------CCCCCCCeEecc
Q 003504 142 PGLLNCQSLVTVDLSMNQLNGSLPDGFG---AAFPKLKSLNLAGNEIKGRDT-HF-------------AGLKSITNLNIS 204 (815)
Q Consensus 142 ~~~~~l~~L~~L~l~~N~l~~~lp~~~~---~~l~~L~~L~L~~N~l~~~~~-~~-------------~~l~~L~~L~Ls 204 (815)
+.+.+|+.|+.++||+|.+....|..+. +..+.|.+|.|++|.+..+.. .+ ..-+.|+.....
T Consensus 86 ~aLlkcp~l~~v~LSDNAfg~~~~e~L~d~is~~t~l~HL~l~NnGlGp~aG~rigkal~~la~nKKaa~kp~Le~vicg 165 (388)
T COG5238 86 KALLKCPRLQKVDLSDNAFGSEFPEELGDLISSSTDLVHLKLNNNGLGPIAGGRIGKALFHLAYNKKAADKPKLEVVICG 165 (388)
T ss_pred HHHhcCCcceeeeccccccCcccchHHHHHHhcCCCceeEEeecCCCCccchhHHHHHHHHHHHHhhhccCCCceEEEec
Confidence 3566789999999999998767775443 334667777777777654321 11 122334444444
Q ss_pred CCcCCCcchhhhhcccceeeeccccccCcccccccccccCCccceEEEcCCCccCcc-----hhhccccCCCCCEEEecC
Q 003504 205 GNLFQGSVMGVFLESLEVIDLRSNQFQGHISQVQFNSSYNWSRLVYVDLSENQLSGE-----IFHNFSQAQNLKHLSLAY 279 (815)
Q Consensus 205 ~N~l~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-----~~~~~~~l~~L~~L~L~~ 279 (815)
.|++..-+.. .....+..-..|+.+.+..|.|.-. ....+..+.+|+.|||..
T Consensus 166 rNRlengs~~----------------------~~a~~l~sh~~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqD 223 (388)
T COG5238 166 RNRLENGSKE----------------------LSAALLESHENLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQD 223 (388)
T ss_pred cchhccCcHH----------------------HHHHHHHhhcCceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccc
Confidence 4444332221 1111111112344444444444322 111223445666666666
Q ss_pred CcCcCCCcc----ccccccCCCeEecCCCcCcCCCchhhh------cCCCCCEEeCCCCcCCCCCCccCCCCccEEEccC
Q 003504 280 NRFTRQEFP----QIGTLLGLEHLNLSRTSLIGDIPSEIL------QLSSLHTLDLSMNHLTGQIPTVSAKNLGIIDMSH 349 (815)
Q Consensus 280 N~l~~~~~~----~~~~l~~L~~L~Ls~N~l~~~~p~~~~------~l~~L~~L~ls~N~l~~~~~~~~~~~L~~L~ls~ 349 (815)
|-++..... .+..++.|+.|.+..|-++.....++. ..++|..|-..+|...+-+- ++.+
T Consensus 224 Ntft~~gS~~La~al~~W~~lrEL~lnDClls~~G~~~v~~~f~e~~~p~l~~L~~~Yne~~~~~i---------~~~~- 293 (388)
T COG5238 224 NTFTLEGSRYLADALCEWNLLRELRLNDCLLSNEGVKSVLRRFNEKFVPNLMPLPGDYNERRGGII---------LDIS- 293 (388)
T ss_pred cchhhhhHHHHHHHhcccchhhhccccchhhccccHHHHHHHhhhhcCCCccccccchhhhcCcee---------eeec-
Confidence 666543322 234455566666666666544333322 13455555555555543211 1111
Q ss_pred CcCcccCChHHhhcCCCCceeeccCCCCc
Q 003504 350 NNLSGEIPASLLEKLPQMERFNFSYNNLT 378 (815)
Q Consensus 350 N~l~~~~p~~~~~~l~~l~~l~l~~N~l~ 378 (815)
.|.-.-..+|-|..+.+.||.+.
T Consensus 294 ------l~~~e~~~~p~L~~le~ngNr~~ 316 (388)
T COG5238 294 ------LNEFEQDAVPLLVDLERNGNRIK 316 (388)
T ss_pred ------hhhhhhcccHHHHHHHHccCcch
Confidence 22222345666777777888764
Done!