Query 003508
Match_columns 814
No_of_seqs 356 out of 3165
Neff 7.5
Searched_HMMs 29240
Date Tue Mar 26 17:42:41 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/003508.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1558-1562//hhsearch_pdb/003508hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3t5t_A Putative glycosyltransf 1.0 1 1 748.0 45.3 413 12-442 46-476 (496)
2 1uqt_A Alpha, alpha-trehalose- 1.0 1 1 675.9 39.9 422 5-439 28-454 (482)
3 3s28_A Sucrose synthase 1; gly 1.0 1 1 227.7 21.7 312 107-439 406-769 (816)
4 3fro_A GLGA glycogen synthase; 1.0 1 1 227.5 32.0 314 88-441 99-432 (439)
5 3vue_A GBSS-I, granule-bound s 1.0 1 1 226.5 28.8 297 107-439 152-511 (536)
6 2r60_A Glycosyl transferase, g 1.0 1 1 223.2 23.8 311 100-442 112-462 (499)
7 2qzs_A Glycogen synthase; glyc 1.0 1 1 212.7 31.0 302 107-442 128-479 (485)
8 3c48_A Predicted glycosyltrans 1.0 1 1 212.4 26.9 298 105-442 119-428 (438)
9 1rzu_A Glycogen synthase 1; gl 1.0 1 1 210.0 29.9 301 107-441 129-477 (485)
10 1u02_A Trehalose-6-phosphate p 1.0 1 1 209.2 20.8 227 468-806 1-231 (239)
No 1
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=1.00 E-value=1 Score=748.01 Aligned_cols=413 Identities=24% Similarity=0.336 Sum_probs=369.1
Q ss_pred CCEEEEECCCCCCCCHHHHHHHH----------HHCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 92999728999999021689998----------63196199853494778767542210013333678999843100002
Q 003508 12 EARWIGWAGVNVPDEIGQKALTK----------ALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATT 81 (814)
Q Consensus 12 ~~~wvg~~g~~~~~~~~~~~~~~----------~~~~~~~~pv~l~~~~~~~~y~~f~~~~lwp~~H~~~~~~~~~~~~~ 81 (814)
+++||||+|.. .++....+ ...+++|+||+|+++++++||+||||++|||+|||+.+.+.. .+.
T Consensus 46 ~~~Wvgw~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~Y~gf~n~~LWPl~H~~~~~~~~-p~~- 119 (496)
T 3t5t_A 46 NISWIASADSE----DDRRASALNPDGVTMELHSGREILVRLIRHDPAVFRNVQNFMTANLMWAANNYGWDRWTQ-PSF- 119 (496)
T ss_dssp TCCEEEECCSH----HHHHHHHHCTTCEEEECTTSCEEEEEEECCCHHHHHHHHHHHSTTTHHHHHTTCCCSSSC-CCB-
T ss_pred CCEEEECCCCC----CCHHHHHCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCHHHCCCCCCCCC-CCC-
T ss_conf 97899417886----421233304554455545678757999968999999998774750144012254336778-762-
Q ss_pred HHHH-HHHHHHHHHHHHHHHHHHHHC--CCCCEEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHCCCC--CCH
Q ss_conf 2128-989999999999999998748--99989999196501599999961899819979815899544450498--857
Q 003508 82 RSFQ-SQFAAYIKANQMFADVVNKHY--KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLP--SRS 156 (814)
Q Consensus 82 ~~~~-~~w~~Y~~vN~~fa~~i~~~~--~~~DiI~ihdyhl~llp~~lr~~~~~~~i~~f~H~Pfp~~e~fr~lp--~~~ 156 (814)
..++ ..|++|++||+.||+++.+.+ +++|+|||||||||++|.+||++.|+++||||+|||||++|+|+++| +|+
T Consensus 120 ~~~~~~~w~~Y~~vN~~fA~~i~~~~~~~~~D~VwVhDYhL~llp~~lR~~~~~~~igfFlHiPfPs~e~f~~Lp~~~r~ 199 (496)
T 3t5t_A 120 GSDAREGWADFGRFTRDFADAILKSSAQSADPVYLVHDYQLVGVPALLREQRPDAPILLFVHIPWPSADYWRILPKEIRT 199 (496)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHTTTCSSCEEEEESGGGTTHHHHHHHHCTTSCEEEECCSCCCCHHHHTTSCHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHCCHHHHH
T ss_conf 11139999999999999999999974468999899947507678999996589983999984899998999657676799
Q ss_pred HHHHHHHHCCEEEEECHHHHHHHHHHHHHHH-CCCC--CCCCEEECCEEEEEEEEECCCCHHHHHHHHCCCCHHHHHHHH
Q ss_conf 9999976244775713888999999999883-7535--899235289378999961356925665661399149999999
Q 003508 157 DLLRAVLAADLVGFHTYDYARHFVSACTRIL-GFEG--TPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKEL 233 (814)
Q Consensus 157 ~il~~ll~aD~I~f~~~~~~~~Fl~~~~~~l-~~~~--~~~~i~~~g~~~~v~v~p~GId~~~f~~~~~~~~~~~~~~~l 233 (814)
+|++|||+||+||||+++|++||+++|.+++ +++. ....++++|+.++|.++|+|||++.|.+... +. ...+
T Consensus 200 ell~gll~~DligF~t~~y~~~Fl~~~~r~l~g~~~~~~~~~v~~~gr~v~v~viP~GID~~~f~~~~~--~~---~~~l 274 (496)
T 3t5t_A 200 GILHGMLPATTIGFFADRWCRNFLESVADLLPDARIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRNP--QL---PEGI 274 (496)
T ss_dssp HHHHHHTTSSEEEESSHHHHHHHHHHHHHHCTTCEEETTTTEEEETTEEEEEEECCCCBCGGGC----C--CC---CTTH
T ss_pred HHHHHHHHCCEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCEEEEEEEECCEECHHHHCHHHH--HH---HHHH
T ss_conf 999999869999996489999999999998267742456876998998889998163757899430149--99---9999
Q ss_pred HHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 99928981999930544468978999999998986846658667999963999993789999999999999850345988
Q 003508 234 QETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTL 313 (814)
Q Consensus 234 r~~~~~~~iIl~VgRl~~~KGi~~~l~A~~~ll~~~P~~~~~v~Lv~i~~p~~~~~~~y~~l~~~l~~lv~~iN~~~g~~ 313 (814)
|++++++++|++|||+++.||+..+|+|| +|++++|+++ +++|+|||.|+++++++|+++++++++++++||++||+.
T Consensus 275 r~~~~~~~lIl~VgRLd~~KGi~~lL~Af-~ll~~~P~~~-~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~g~~ 352 (496)
T 3t5t_A 275 EEWADGHRLVVHSGRTDPIKNAERAVRAF-VLAARGGGLE-KTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGSD 352 (496)
T ss_dssp HHHHTTSEEEEEEEESSGGGCHHHHHHHH-HHHHHTSSCT-TEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHCCCEEEEECCCCCCCCCHHHHHHHH-HHHHHCCCCC-EEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99828963999836676115979999999-9987496553-389999977777874679999999999999846436886
Q ss_pred CCCCEEEECCCCCHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCEEEECCCCHHH
Q ss_conf 84338994688998899999986668998789766881488776603699843999188781000389639989999999
Q 003508 314 TAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITE 393 (814)
Q Consensus 314 ~~~~v~~~~~~i~~~el~aly~~ADv~v~tS~~EG~~Lv~lEama~~~~~~g~lVlS~~~G~~~~lg~~~~lvnP~d~~~ 393 (814)
+|+| .+.++.+++.++|++|||||+||++||||||++|||||+ .++||+|+|+++|++++++.+|++|||+|+++
T Consensus 353 ---~V~f-~g~v~~~el~aly~~ADv~vv~SlrEGfgLv~~EamA~~-~~~g~lVlSe~aGa~~~l~~~allVnP~D~~~ 427 (496)
T 3t5t_A 353 ---TVRI-DNDNDVNHTIACFRRADLLIFNSTVDGQNLSTFEAPLVN-ERDADVILSETCGAAEVLGEYCRSVNPFDLVE 427 (496)
T ss_dssp ---SEEE-EECCCHHHHHHHHHHCSEEEECCSSBSCCSHHHHHHHHC-SSCCEEEEETTBTTHHHHGGGSEEECTTBHHH
T ss_pred ---CEEE-ECCCCHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHC-CCCCCEEEECCCCCHHHHCCCEEEECCCCHHH
T ss_conf ---7899-488999999999985659998955145890699998817-99988899679888788679889989999999
Q ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999944999999999998857998739999999999999984887
Q 003508 394 VANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVE 442 (814)
Q Consensus 394 lA~ai~~~L~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~~~ 442 (814)
+|++|.++|+|+.+||++|+++++++|.+||+..|++.||.+|..+...
T Consensus 428 lA~AI~~aL~m~~~er~~r~~~~~~~V~~~d~~~W~~~fl~~L~~~~~~ 476 (496)
T 3t5t_A 428 QAEAISAALAAGPRQRAEAAARRRDAARPWTLEAWVQAQLDGLAADHAA 476 (496)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHHHHHHHTTCBHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC
T ss_conf 9999999974999999999999989999789999999999998632410
No 2
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=1.00 E-value=1 Score=675.86 Aligned_cols=422 Identities=35% Similarity=0.620 Sum_probs=382.3
Q ss_pred CCCC-CCCCCEEEEECCCCCCCCHHHHHHH-HHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 3797-6799299972899999902168999-8631961998534947787675422100133336789998431000022
Q 003508 5 FEGV-KEFEARWIGWAGVNVPDEIGQKALT-KALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTR 82 (814)
Q Consensus 5 ~~~~-~~~~~~wvg~~g~~~~~~~~~~~~~-~~~~~~~~~pv~l~~~~~~~~y~~f~~~~lwp~~H~~~~~~~~~~~~~~ 82 (814)
|.++ ++.+++||||+|.. ++ +++ .+. ....+++|+||||++++++.||+||||++|||+|||+....
T Consensus 28 l~~~~~~~~~~wvgw~g~~-~~-~~~-~~~~~~~~~~~~~~v~l~~~~~~~~y~gf~~~~lWp~~H~~~~~~-------- 96 (482)
T 1uqt_A 28 ILGALKAAGGLWFGWSGET-GN-EDQ-PLKKVKKGNITWASFNLSEQDLDEYYNQFSNAVLWPAFHYRLDLV-------- 96 (482)
T ss_dssp HHHHHHHHCEEEEEEEEEE-SC-CSS-CCEEEEETTEEEEEEEECHHHHHHHTTTHHHHTHHHHHTTCGGGC--------
T ss_pred HHHHHHHCCCEEEECCCCC-CC-CCC-HHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCC--------
T ss_conf 9999851797999579998-75-433-023412688349999799899999998736610441115767755--------
Q ss_pred HHHHH-HHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHCCCCCCHHHHHH
Q ss_conf 12898-99999999999999987489998999919650159999996189981997981589954445049885799999
Q 003508 83 SFQSQ-FAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRA 161 (814)
Q Consensus 83 ~~~~~-w~~Y~~vN~~fa~~i~~~~~~~DiI~ihdyhl~llp~~lr~~~~~~~i~~f~H~Pfp~~e~fr~lp~~~~il~~ 161 (814)
.|+.+ |.+|..+|+.||+++.+.++++|+|||||||++++|.++|+..++++|+||+|+|||++++|+++|++++++++
T Consensus 97 ~~~~~~w~~y~~vN~~fa~~l~~~~~~~DiV~vHdyhl~~l~~~lr~~~~~~~i~~~~H~pfp~~~~~~~lp~~~~il~~ 176 (482)
T 1uqt_A 97 QFQRPAWDGYLRVNALLADKLLPLLQDDDIIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPTPEIFNALPTYDTLLEQ 176 (482)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHGGGCCTTCEEEEESGGGTTHHHHHHHTTCCSCEEEECCSCCCCHHHHTTSTTHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHCCCHHHHHHH
T ss_conf 54778899999999999999998448899899977349999999998689996899985899988998548637999976
Q ss_pred HHHCCEEEEECHHHHHHHHHHHHHHHCCCCCC-CCEEECCEEEEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHCCC
Q ss_conf 76244775713888999999999883753589-92352893789999613569256656613991499999999992898
Q 003508 162 VLAADLVGFHTYDYARHFVSACTRILGFEGTP-EGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGR 240 (814)
Q Consensus 162 ll~aD~I~f~~~~~~~~Fl~~~~~~l~~~~~~-~~i~~~g~~~~v~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~ 240 (814)
++++|+|+|++++++++|+++|+++++.+... ..++++|+..++.++|+|||++.|.+....++..+ ...+|++++++
T Consensus 177 ll~~d~i~f~~~~~~~~f~~~~~~~l~~~~~~~~~~~~~g~~~~v~vip~GID~~~f~~~~~~~~~~~-~~~lr~~~~~~ 255 (482)
T 1uqt_A 177 LCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTAWGKAFRTEVYPIGIEPKEIAKQAAGPLPPK-LAQLKAELKNV 255 (482)
T ss_dssp HTTSSEEEESSHHHHHHHHHHHHHHSCEEEETTTEEEETTEEEEEEECCCCCCHHHHHHHHHSCCCHH-HHHHHHHTTTC
T ss_pred HHCCCEEEEECHHHHHHHHHHHHHHHCCCCCCCCEEEECCEEEEEEEEECCCCHHHHHHHHCCCCHHH-HHHHHHHHCCC
T ss_conf 63168678877999999999999871871325874898892789999846679799997742832479-99999985898
Q ss_pred EEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE
Q ss_conf 19999305444689789999999989868466586679999639999937899999999999998503459888433899
Q 003508 241 KVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHH 320 (814)
Q Consensus 241 ~iIl~VgRl~~~KGi~~~l~A~~~ll~~~P~~~~~v~Lv~i~~p~~~~~~~y~~l~~~l~~lv~~iN~~~g~~~~~~v~~ 320 (814)
++|++|||+++.||+..+|+||+++++++|+++++++|+|||.|+++++++|+++++++++++++||.+||..+|.||++
T Consensus 256 ~vil~VgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vG~p~~~~~~~~~~l~~~l~~l~~~in~~~g~~~~~~v~~ 335 (482)
T 1uqt_A 256 QNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYY 335 (482)
T ss_dssp EEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEE
T ss_pred EEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
T ss_conf 79999737736579899999999999869130274799999788765527799999999999999754326678740899
Q ss_pred ECCCCCHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHCC-CCCCEEEEECCCCCCCCCCCCEEEECCCCHHHHHHHHH
Q ss_conf 46889988999999866689987897668814887766036-99843999188781000389639989999999999999
Q 003508 321 LDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQD-LKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIA 399 (814)
Q Consensus 321 ~~~~i~~~el~aly~~ADv~v~tS~~EG~~Lv~lEama~~~-~~~g~lVlS~~~G~~~~lg~~~~lvnP~d~~~lA~ai~ 399 (814)
+.+.++++++.++|++|||||+||++||||||++||||||. +++||+|+|+++|+++++ .+|++|||+|++++|++|.
T Consensus 336 ~~g~v~~~el~~ly~~ADv~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~l-~~g~lv~p~d~~~lA~ai~ 414 (482)
T 1uqt_A 336 LNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANEL-TSALIVNPYDRDEVAAALD 414 (482)
T ss_dssp ECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTC-TTSEEECTTCHHHHHHHHH
T ss_pred ECCCCCHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCHHHH-CCEEEECCCCHHHHHHHHH
T ss_conf 579899999999999705999897735588269999991888889888997898987995-8818989899999999999
Q ss_pred HHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
Q ss_conf 9944999999999998857998739999999999999984
Q 003508 400 RALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDT 439 (814)
Q Consensus 400 ~~L~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~ 439 (814)
++|+|++++|+++++++++++.+|++..|++.|+..+.++
T Consensus 415 ~lL~~~~~~r~~~~~~~~~~v~~~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 415 RALTMSLAERISRHAEMLDVIVKNDINHWQECFISDLKQI 454 (482)
T ss_dssp HHHTCCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred HHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC
T ss_conf 9981999999999999889999689999999999999844
No 3
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=1.00 E-value=1 Score=227.70 Aligned_cols=312 Identities=12% Similarity=0.091 Sum_probs=212.4
Q ss_pred CCCCEEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHCCCCCCHHHH-------------HHHHHCCEEEEECH
Q ss_conf 99989999196501599999961899819979815899544450498857999-------------99762447757138
Q 003508 107 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLL-------------RAVLAADLVGFHTY 173 (814)
Q Consensus 107 ~~~DiI~ihdyhl~llp~~lr~~~~~~~i~~f~H~Pfp~~e~fr~lp~~~~il-------------~~ll~aD~I~f~~~ 173 (814)
...|+||.|++...+++.++++.. .+|++++.|...+........ .++.+. ..+..+|.|...+.
T Consensus 406 ~~PDVIHsH~~~sglva~llar~~-gvP~V~T~Hsl~~~k~~~~~~-~~~~~~~~y~~~~r~~aE~~~l~~AD~VIa~S~ 483 (816)
T 3s28_A 406 GKPDLIIGNYSDGNLVASLLAHKL-GVTQCTIAHALEKTKYPDSDI-YWKKLDDKYHFSCQFTADIFAMNHTDFIITSTF 483 (816)
T ss_dssp SCCSEEEEEHHHHHHHHHHHHHHH-TCCEEEECSCCHHHHSTTTTT-THHHHHHHHCHHHHHHHHHHHHHHSSEEEESCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCCEEEEEECCCCCCCCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCH
T ss_conf 997399968853899999999975-998899981663001222330-155677888898888899999984999998889
Q ss_pred HHHHHHHHHHHHHHCCCC---CCC------CEEECCEEEEEEEEECCCCHHHHHHHHCCCC----HHHHHHHH-------
Q ss_conf 889999999998837535---899------2352893789999613569256656613991----49999999-------
Q 003508 174 DYARHFVSACTRILGFEG---TPE------GVEDQGRLTRVAAFPIGIDSERFIRALEINP----VQVHIKEL------- 233 (814)
Q Consensus 174 ~~~~~Fl~~~~~~l~~~~---~~~------~i~~~g~~~~v~v~p~GId~~~f~~~~~~~~----~~~~~~~l------- 233 (814)
...+.....+..+ +... .+. ++..... ++.++|+|||.+.|.+...... .......+
T Consensus 484 ~~~~~l~~~~~~y-~~~~~~~~p~Lyr~~~gI~~~~~--ki~VIpnGVD~~~F~P~~~~~~Rl~~~~~~i~~~l~~p~~~ 560 (816)
T 3s28_A 484 QEIAGSKETVGQY-ESHTAFTLPGLYRVVHGIDVFDP--KFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVEN 560 (816)
T ss_dssp HHHHCCSSSCCTT-GGGSSEEETTTEEEEESCCTTCT--TEEECCCCCCTTTSCCTTCTTTCCGGGHHHHHHHHHCSCCB
T ss_pred HHHHHHHHHHHHH-HHHHCCCCCHHHHCCCCCCCCCC--CEEEECCCCCHHHCCCCCHHHHHHHHCCCCCCCCCCCHHHH
T ss_conf 9999999888776-44201354112210122446778--87998897478872863103554320023200012460567
Q ss_pred HHH-----HCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCC--CCCHHHHHHHHHHHHHHHHHH
Q ss_conf 999-----2898199993054446897899999999898684665866799996399--999378999999999999985
Q 003508 234 QET-----FAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPT--RTDVPEYQRLTSQVHEIVGRI 306 (814)
Q Consensus 234 r~~-----~~~~~iIl~VgRl~~~KGi~~~l~A~~~ll~~~P~~~~~v~Lv~i~~p~--~~~~~~y~~l~~~l~~lv~~i 306 (814)
++. ..++++|++|||+++.||++.+++|+..+.+.+|++ .|+++|.+. .....+..+..+++++++.+.
T Consensus 561 r~~lg~l~~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~~~~v----~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~l 636 (816)
T 3s28_A 561 KEHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELA----NLVVVGGDRRKESKDNEEKAEMKKMYDLIEEY 636 (816)
T ss_dssp TTEESCBSCTTSCEEEEECCCCTTTTHHHHHHHHHHCHHHHHHC----EEEEECCCTTSCCCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCE----EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHC
T ss_conf 77744457899839999744722179999999999978557996----99999688753334335699999999999974
Q ss_pred HCCCCCCCCCCEEEECC----CCCHHHHHHHHH-HCCEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCC--
Q ss_conf 03459888433899468----899889999998-66689987897668814887766036998439991887810003--
Q 003508 307 NGRFGTLTAVPIHHLDR----SLDFPALCALYA-VTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-- 379 (814)
Q Consensus 307 N~~~g~~~~~~v~~~~~----~i~~~el~aly~-~ADv~v~tS~~EG~~Lv~lEama~~~~~~g~lVlS~~~G~~~~l-- 379 (814)
+.. ..|. |.| .++.+++..+|. +||+||+||.+||||++++|||||| .|+|+|+.+|..+.+
T Consensus 637 gL~------~~V~-flG~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G----~PVIasd~GG~~EiV~d 705 (816)
T 3s28_A 637 KLN------GQFR-WISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCG----LPTFATCKGGPAEIIVH 705 (816)
T ss_dssp TCB------BBEE-EECCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTT----CCEEEESSBTHHHHCCB
T ss_pred CCC------CCEE-ECCCCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHCC----CCEEEECCCCHHHHHCC
T ss_conf 998------7289-816755668999999999956909998887557649999999809----99999689876999706
Q ss_pred CCCEEEECCCCHHHHHHHHHHHH----CCCHHHHHHHHHHHHHHH-HHCCHHHHHHHHHHHHHHH
Q ss_conf 89639989999999999999994----499999999999885799-8739999999999999984
Q 003508 380 GAGAILVNPWNITEVANAIARAL----NMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELNDT 439 (814)
Q Consensus 380 g~~~~lvnP~d~~~lA~ai~~~L----~~~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l~~~ 439 (814)
+.+|++|+|.|++++|++|.+++ .++ +.+.+++.++++++ +.|++..++++++.-.+..
T Consensus 706 g~~Gllv~p~D~e~LA~aI~~lL~~Ll~d~-~~~~~m~~~ar~~a~~~fSwe~~a~~ll~lY~~~ 769 (816)
T 3s28_A 706 GKSGFHIDPYHGDQAADTLADFFTKCKEDP-SHWDEISKGGLQRIEEKYTWQIYSQRLLTLTGVY 769 (816)
T ss_dssp TTTBEEECTTSHHHHHHHHHHHHHHHHHCT-HHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHH
T ss_pred CCCEEEECCCCHHHHHHHHHHHHHHHCCCH-HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_conf 981899689999999999999998752699-9999999999999998689999999999999997
No 4
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=1.00 E-value=1 Score=227.49 Aligned_cols=314 Identities=18% Similarity=0.190 Sum_probs=234.7
Q ss_pred HHHHHHHHHHHHHHHHHH---CCCCCEEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCCCH---HHHC--------CCC
Q ss_conf 999999999999999874---89998999919650159999996189981997981589954---4450--------498
Q 003508 88 FAAYIKANQMFADVVNKH---YKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSS---EIHR--------TLP 153 (814)
Q Consensus 88 w~~Y~~vN~~fa~~i~~~---~~~~DiI~ihdyhl~llp~~lr~~~~~~~i~~f~H~Pfp~~---e~fr--------~lp 153 (814)
+..+..+.+.....+... ....|+||+|+++..+++.++++. ...+++++.|..++.. ..+. ...
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~-~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~ 177 (439)
T 3fro_A 99 IRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKY-FKIPAVFTIHRLNKSKLPAFYFHEAGLSELAPYP 177 (439)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGGGHHHHHHHHHH-HCCCEEEEESCCCCCCEEHHHHHHTTCGGGCCSS
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHC-CCCCEEEEECCCCCCCCCHHHHCCCCCCCCCCCC
T ss_conf 232578999999999997444799819994640343458988652-6997899965344456856774745510035666
Q ss_pred CCHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHCCCCCCCCEEECCEEEEEEEEECCCCHHHHHHHHCCCCHHHHHHHH
Q ss_conf 85799999762447757138889999999998837535899235289378999961356925665661399149999999
Q 003508 154 SRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKEL 233 (814)
Q Consensus 154 ~~~~il~~ll~aD~I~f~~~~~~~~Fl~~~~~~l~~~~~~~~i~~~g~~~~v~v~p~GId~~~f~~~~~~~~~~~~~~~l 233 (814)
........+..+|.|.+.+....+.... .++. ...++.++|+|||.+.|.+....+........+
T Consensus 178 ~~~~~~~~~~~ad~ii~~S~~~~~~~~~----~~~~-----------~~~~i~vi~ngvd~~~~~~~~~~~~~~~~~~~~ 242 (439)
T 3fro_A 178 DIDPEHTGGYIADIVTTVSRGYLIDEWG----FFRN-----------FEGKITYVFNGIDCSFWNESYLTGSRDERKKSL 242 (439)
T ss_dssp EECHHHHHHHHCSEEEESCHHHHHHTHH----HHGG-----------GTTSEEECCCCCCTTTSCGGGSCSCHHHHHHHH
T ss_pred EEEHHHHHHHHCCEEEECCHHHHHHHHH----HHHH-----------CCCCEEECCCCCCCHHCCCCCCCCHHHHHHHHH
T ss_conf 3207666554345887268989999860----5650-----------477345347888804308432211045669999
Q ss_pred HHHH--CCCEEEEEECCCC-CCCCHHHHHHHHHHHHHHC--CCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHC
Q ss_conf 9992--8981999930544-4689789999999989868--466586679999639999937899999999999998503
Q 003508 234 QETF--AGRKVMLGVDRLD-MIKGIPQKLLAFEKFLEEN--SDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRING 308 (814)
Q Consensus 234 r~~~--~~~~iIl~VgRl~-~~KGi~~~l~A~~~ll~~~--P~~~~~v~Lv~i~~p~~~~~~~y~~l~~~l~~lv~~iN~ 308 (814)
++++ .++++|+++||+. +.||++.+++|++.+.+++ |+ +.|+++|.+ +. .+.+++++++.+.+
T Consensus 243 ~~~~~~~~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~----~~l~i~G~g-----~~--~~~~~l~~~~~~~~- 310 (439)
T 3fro_A 243 LSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQE----MRFIIIGKG-----DP--ELEGWARSLEEKHG- 310 (439)
T ss_dssp HHHHTCCSCEEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGG----EEEEEECCC-----CH--HHHHHHHHHHHHCT-
T ss_pred HHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCC----EEEEEECCC-----CH--HHHHHHHHHHHHCC-
T ss_conf 9973999984799973335343669999999999985466787----189998079-----72--67789999875069-
Q ss_pred CCCCCCCCCEEEECCCCCHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCC-CCCEEEEC
Q ss_conf 45988843389946889988999999866689987897668814887766036998439991887810003-89639989
Q 003508 309 RFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-GAGAILVN 387 (814)
Q Consensus 309 ~~g~~~~~~v~~~~~~i~~~el~aly~~ADv~v~tS~~EG~~Lv~lEama~~~~~~g~lVlS~~~G~~~~l-g~~~~lvn 387 (814)
.++++.|.++.+++..+|+.||++|+||.+|||+++.+|||||| .|+|+|+.+|..+.+ ..+|++++
T Consensus 311 --------~~~~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G----~Pvi~s~~~~~~e~~~~~~g~~~~ 378 (439)
T 3fro_A 311 --------NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLG----AIPIASAVGGLRDIITNETGILVK 378 (439)
T ss_dssp --------TEEEECSCCCHHHHHHHHTTCSEEEECBSCCSSCHHHHHHHHTT----CEEEEESSTHHHHHCCTTTCEEEC
T ss_pred --------CEEEECCCCCHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHCC----CCEEECCCCCCCEEEECCCEEEEC
T ss_conf --------89997287998899999997799995898788618999999779----976973788743168758448968
Q ss_pred CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999994499999999999885799873999999999999998488
Q 003508 388 PWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVV 441 (814)
Q Consensus 388 P~d~~~lA~ai~~~L~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~~ 441 (814)
|.|+++++++|.+++.+.++.+..+..++++.++.|++..+++.++..+.++.+
T Consensus 379 ~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 432 (439)
T 3fro_A 379 AGDPGELANAILKALELSRSDLSKFRENCKKRAMSFSWEKSAERYVKAYTGSID 432 (439)
T ss_dssp TTCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHHTSCHHHHHHHHHHHHHTCSC
T ss_pred CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf 899899999999998319999999999999987647299999999999999997
No 5
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=1.00 E-value=1 Score=226.52 Aligned_cols=297 Identities=18% Similarity=0.190 Sum_probs=204.0
Q ss_pred CCCCEEEEECCCCHHHHHHHHHHC------CCCEEEEEEECCCCC----HHHHCC--CCC--------------------
Q ss_conf 999899991965015999999618------998199798158995----444504--988--------------------
Q 003508 107 KDGDVVWCHDYHLMFLPKCLKEYN------SDMKVGWFLHTPFPS----SEIHRT--LPS-------------------- 154 (814)
Q Consensus 107 ~~~DiI~ihdyhl~llp~~lr~~~------~~~~i~~f~H~Pfp~----~e~fr~--lp~-------------------- 154 (814)
.++||+|.||+|..++|.+++... ...+++|+.|..-.. .+.+.. ++.
T Consensus 152 ~~ddIiH~hDW~t~l~~~~l~~~~~~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (536)
T 3vue_A 152 GEDVVFVCNDWHTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVEGRK 231 (536)
T ss_dssp CSCEEEEEESGGGSTHHHHHHHHTTTTTSSTTCEEEEEESCTTCCCEEEGGGGGGGCCCGGGHHHHEEEETTTSTTCEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHCCCCHHHCCHHHHHHCCCCCCCCCC
T ss_conf 99879997760489999999986402332025634542157422455553336441896564010333311464100330
Q ss_pred CHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHCCCCCCCCEEECCEEEEEEEEECCCCHHHHHHHHCC--------CC-
Q ss_conf 579999976244775713888999999999883753589923528937899996135692566566139--------91-
Q 003508 155 RSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEI--------NP- 225 (814)
Q Consensus 155 ~~~il~~ll~aD~I~f~~~~~~~~Fl~~~~~~l~~~~~~~~i~~~g~~~~v~v~p~GId~~~f~~~~~~--------~~- 225 (814)
-..+..++..||.|..-++.|++..++ ..+. ........+..++.++|||||++.|.|..+. ..
T Consensus 232 ~n~~k~~i~~ad~v~tVS~~~a~ei~~----~~~~---g~~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~~~ 304 (536)
T 3vue_A 232 INWMKAGILEADRVLTVSPYYAEELIS----GIAR---GCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTA 304 (536)
T ss_dssp EEHHHHHHHHCSEEEESCHHHHHHHHT----TCCC---CSSSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTTTH
T ss_pred HHHHHHHHHHCCEEEECCHHHHHHHHC----CCCC---CCCCCCCCCCCCEEEEECCCCHHHCCCCCCCCCCCCCCHHHH
T ss_conf 439999998536778768788534312----6344---522001254578189979966421488776210014443455
Q ss_pred --HH-HHHHHHHHHH-----CCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHH
Q ss_conf --49-9999999992-----898199993054446897899999999898684665866799996399999378999999
Q 003508 226 --VQ-VHIKELQETF-----AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTS 297 (814)
Q Consensus 226 --~~-~~~~~lr~~~-----~~~~iIl~VgRl~~~KGi~~~l~A~~~ll~~~P~~~~~v~Lv~i~~p~~~~~~~y~~l~~ 297 (814)
.+ .....+++.+ .+.++|++|||+++.||++.+++|+.+++++. ..|+++|.+ +.. ...
T Consensus 305 ~~~K~~~k~~l~~~~gl~~d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~~~------~~l~l~G~G---~~~----~~~ 371 (536)
T 3vue_A 305 IEAKALNKEALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQED------VQIVLLGTG---KKK----FEK 371 (536)
T ss_dssp HHHHHHHHHHHHHHTTSCCCTTSCEEEEECCBSGGGCHHHHHHHHHHHTTSS------CEEEEECCB---CHH----HHH
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHC------CEEEEEECC---CCH----HHH
T ss_conf 5656777999998619987999758999965302378478999999768549------859999546---726----899
Q ss_pred HHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCC
Q ss_conf 99999998503459888433899468899889999998666899878976688148877660369984399918878100
Q 003508 298 QVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQ 377 (814)
Q Consensus 298 ~l~~lv~~iN~~~g~~~~~~v~~~~~~i~~~el~aly~~ADv~v~tS~~EG~~Lv~lEama~~~~~~g~lVlS~~~G~~~ 377 (814)
.++.+...+.. .+. +.+..+.+++..+|+.||+||+||.+||||++.+|||+|+ .|+|+|+.+|..+
T Consensus 372 ~~~~~~~~~~~--------~v~-~~~~~~~~~~~~~~~~aD~~v~PS~~E~fgl~~lEAma~G----~PvI~s~~gG~~e 438 (536)
T 3vue_A 372 LLKSMEEKYPG--------KVR-AVVKFNAPLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYG----TPCACASTGGLVD 438 (536)
T ss_dssp HHHHHHHHSTT--------TEE-EECSCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHTT----CCEEECSCTHHHH
T ss_pred HHHHHHHHCCC--------CEE-EEEECCHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHCC----CCEEECCCCCCHH
T ss_conf 99998761688--------549-9971468889999986234253465689888999999869----9899907998222
Q ss_pred CC--CCCEE----------EECCCCHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
Q ss_conf 03--89639----------9899999999999999944--999999999998857998739999999999999984
Q 003508 378 SL--GAGAI----------LVNPWNITEVANAIARALN--MSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDT 439 (814)
Q Consensus 378 ~l--g~~~~----------lvnP~d~~~lA~ai~~~L~--~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~ 439 (814)
.+ |.+|+ +|+|.|+++++++|.++|. ..+ .++++.++. ..+.|+|.+-+++++.-..+.
T Consensus 439 ~V~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~~~~~~-~~~~~~~~a--m~~~fSW~~~A~~y~~ly~~L 511 (536)
T 3vue_A 439 TVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIKVVGTP-AYEEMVRNC--MNQDLSWKGPAKNWENVLLGL 511 (536)
T ss_dssp HCCBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHHHTTSH-HHHHHHHHH--HHSCCSSHHHHHHHHHHHHTT
T ss_pred EEECCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCH-HHHHHHHHH--HHHCCCHHHHHHHHHHHHHHH
T ss_conf 0227987632466777515879999999999999999852959-999999998--773599999999999999986
No 6
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=1.00 E-value=1 Score=223.22 Aligned_cols=311 Identities=16% Similarity=0.092 Sum_probs=216.2
Q ss_pred HHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCCCHHH-HCCCCC------------CH-HH-HHHHHH
Q ss_conf 9998748999899991965015999999618998199798158995444-504988------------57-99-999762
Q 003508 100 DVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEI-HRTLPS------------RS-DL-LRAVLA 164 (814)
Q Consensus 100 ~~i~~~~~~~DiI~ihdyhl~llp~~lr~~~~~~~i~~f~H~Pfp~~e~-fr~lp~------------~~-~i-l~~ll~ 164 (814)
+.+.+...+.|+||+|.+....++.++.+. ...+++++.|..++.... +..... .. .+ ...+..
T Consensus 112 ~~l~~~~~~~Divh~~~~~~~~~~~~~~~~-~~~p~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (499)
T 2r60_A 112 NFYREEGKFPQVVTTHYGDGGLAGVLLKNI-KGLPFTFTGHSLGAQKMEKLNVNTSNFKEMDERFKFHRRIIAERLTMSY 190 (499)
T ss_dssp HHHHHHTCCCSEEEEEHHHHHHHHHHHHHH-HCCCEEEECSSCHHHHHHTTCCCSTTSHHHHHHHCHHHHHHHHHHHHHH
T ss_pred HHHHHCCCCCCEEEECCCCCHHHHHHHHHH-CCCCEEEECCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
T ss_conf 999853899888997578620799998873-5996899806840011134414787761245567888999999999846
Q ss_pred CCEEEEECHHHHHHHHHHHHHH--HC-CCCCCCCEEECCEEEEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHH----
Q ss_conf 4477571388899999999988--37-5358992352893789999613569256656613991499999999992----
Q 003508 165 ADLVGFHTYDYARHFVSACTRI--LG-FEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---- 237 (814)
Q Consensus 165 aD~I~f~~~~~~~~Fl~~~~~~--l~-~~~~~~~i~~~g~~~~v~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---- 237 (814)
+|.|.+.+....+.+.. . ++ .. . .....++.++|+|||.+.|.+... .+....+|+++
T Consensus 191 ad~vi~~S~~~~~~~~~----~~~~g~~~------~-~~~~~ki~vi~ngvd~~~~~~~~~----~~~~~~~r~~~~~~~ 255 (499)
T 2r60_A 191 ADKIIVSTSQERFGQYS----HDLYRGAV------N-VEDDDKFSVIPPGVNTRVFDGEYG----DKIKAKITKYLERDL 255 (499)
T ss_dssp CSEEEESSHHHHHHTTT----SGGGTTTC------C-TTCGGGEEECCCCBCTTTSSSCCC----HHHHHHHHHHHHHHS
T ss_pred CCEEEECCHHHHHHHHH----HHCCCCCC------C-CCCCCCEEEECCCCCHHHCCCCCH----HHHHHHHHHHHCCCC
T ss_conf 89999888899999986----41246422------3-467887699879958665686410----356789998836433
Q ss_pred ----CCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCC------H-HHHHHHHHHHHHHHHHH
Q ss_conf ----898199993054446897899999999898684665866799996399999------3-78999999999999985
Q 003508 238 ----AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTD------V-PEYQRLTSQVHEIVGRI 306 (814)
Q Consensus 238 ----~~~~iIl~VgRl~~~KGi~~~l~A~~~ll~~~P~~~~~v~Lv~i~~p~~~~------~-~~y~~l~~~l~~lv~~i 306 (814)
.++++|+++||+.+.||+..+++|+..+.+++|+. +.|+++|... +. . ....++.+++++++.++
T Consensus 256 ~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~---~~l~i~G~~~-~~~~~y~~l~~~~~~y~~~l~~~~~~~ 331 (499)
T 2r60_A 256 GSERMELPAIIASSRLDQKKNHYGLVEAYVQNKELQDKA---NLVLTLRGIE-NPFEDYSRAGQEEKEILGKIIELIDNN 331 (499)
T ss_dssp CGGGTTSCEEEECSCCCGGGCHHHHHHHHHTCHHHHHHC---EEEEEESSCS-BTTTBCTTSCHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCC---EEEEEECCCC-CCCCCCCCCCCCCHHHHHHHHHHHHHC
T ss_conf 456888768999606850158899999999998738886---5999987888-753221111320147999999999864
Q ss_pred HCCCCCCCCCCEEEECCCCCHHHHHHHHHHC----CEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCC--C
Q ss_conf 0345988843389946889988999999866----689987897668814887766036998439991887810003--8
Q 003508 307 NGRFGTLTAVPIHHLDRSLDFPALCALYAVT----DVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--G 380 (814)
Q Consensus 307 N~~~g~~~~~~v~~~~~~i~~~el~aly~~A----Dv~v~tS~~EG~~Lv~lEama~~~~~~g~lVlS~~~G~~~~l--g 380 (814)
+.. ..|+ |.|+++.+++..+|+.| |++|+||.+|||+++++|||||| .|+|+|+.+|..+.+ +
T Consensus 332 ~l~------~~V~-~~G~v~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~G----~PvI~s~~~g~~e~v~~~ 400 (499)
T 2r60_A 332 DCR------GKVS-MFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASG----LPAVVTRNGGPAEILDGG 400 (499)
T ss_dssp TCB------TTEE-EEECCSHHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHTT----CCEEEESSBHHHHHTGGG
T ss_pred CCC------CEEE-ECCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHCC----CCEEEECCCCHHHHHCCC
T ss_conf 998------6099-87889989999999955767988997864589796899999769----988981688778873478
Q ss_pred CCEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH-CCHHHHHHHHHHHHHHHHHH
Q ss_conf 963998999999999999999449999999999988579987-39999999999999984887
Q 003508 381 AGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTT-HTAQEWAETFVSELNDTVVE 442 (814)
Q Consensus 381 ~~~~lvnP~d~~~lA~ai~~~L~~~~~er~~r~~~~~~~v~~-~~~~~W~~~fl~~l~~~~~~ 442 (814)
.+|++|+|.|++++|++|.+++.+ ++.+.++..++++++.. |++...++.++..+.+....
T Consensus 401 ~~g~l~~~~d~~~la~~i~~ll~~-~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~~~~ 462 (499)
T 2r60_A 401 KYGVLVDPEDPEDIARGLLKAFES-EETWSAYQEKGKQRVEERYTWQETARGYLEVIQEIADR 462 (499)
T ss_dssp TSSEEECTTCHHHHHHHHHHHHSC-HHHHHHHHHHHHHHHHHHSBHHHHHHHHHHHHHHHHHC
T ss_pred CEEEEECCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf 607995899999999999999869-99999999999999987579999999999999998732
No 7
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=1.00 E-value=1 Score=212.75 Aligned_cols=302 Identities=18% Similarity=0.139 Sum_probs=209.7
Q ss_pred CCCCEEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCCCH----HHHCC--CC-------------CCHHHHHHHHHCCE
Q ss_conf 9998999919650159999996189981997981589954----44504--98-------------85799999762447
Q 003508 107 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSS----EIHRT--LP-------------SRSDLLRAVLAADL 167 (814)
Q Consensus 107 ~~~DiI~ihdyhl~llp~~lr~~~~~~~i~~f~H~Pfp~~----e~fr~--lp-------------~~~~il~~ll~aD~ 167 (814)
...|+||+|+++..+++.+++.+....+++++.|..++.. ..+.. ++ ........+..+|.
T Consensus 128 ~~~Divh~~~~~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ 207 (485)
T 2qzs_A 128 WRPDVVHAHDWHAGLAPAYLAARGRPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYYADH 207 (485)
T ss_dssp CCCSEEEEETGGGTTHHHHHHHTTCSSEEEEEESCTTCCCEEEGGGGGTTTCCGGGCSTTTTEETTEEEHHHHHHHHCSE
T ss_pred CCCCEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHCCCCCHHCCCCCCCCCCCCCHHHHHHHHCCE
T ss_conf 89978996062133789997543689978999468413578898888764999132131112324654699999875386
Q ss_pred EEEECHHHHHHHHHHHHHHHCCCCCCCCEEECCEE--EEEEEEECCCCHHHHHHHHCC-----------CCHHHHHHHHH
Q ss_conf 75713888999999999883753589923528937--899996135692566566139-----------91499999999
Q 003508 168 VGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRL--TRVAAFPIGIDSERFIRALEI-----------NPVQVHIKELQ 234 (814)
Q Consensus 168 I~f~~~~~~~~Fl~~~~~~l~~~~~~~~i~~~g~~--~~v~v~p~GId~~~f~~~~~~-----------~~~~~~~~~lr 234 (814)
|...+....+.+... .++.... ..+ ..+. .++.++|+|||.+.|.+.... .........++
T Consensus 208 vi~~S~~~~~~~~~~---~~~~~~~-~~~--~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 281 (485)
T 2qzs_A 208 ITAVSPTYAREITEP---QFAYGME-GLL--QQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQ 281 (485)
T ss_dssp EEESSHHHHHHTTSH---HHHTTCH-HHH--HHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHHHHH
T ss_pred EEECCHHHHHHHHCC---CCCCCHH-HHH--HHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 885688999998540---1472468-999--8506678669974698766458644422212366300657788499999
Q ss_pred HHHC-----CCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 9928-----98199993054446897899999999898684665866799996399999378999999999999985034
Q 003508 235 ETFA-----GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGR 309 (814)
Q Consensus 235 ~~~~-----~~~iIl~VgRl~~~KGi~~~l~A~~~ll~~~P~~~~~v~Lv~i~~p~~~~~~~y~~l~~~l~~lv~~iN~~ 309 (814)
++++ ++++|+++||+.+.||++.+++|+..+.+. + +.|+++|.+ +. .+.+++++++.+.+
T Consensus 282 ~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~--~----~~l~ivG~g-----~~--~~~~~l~~~~~~~~-- 346 (485)
T 2qzs_A 282 IAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLEQ--G----GQLALLGAG-----DP--VLQEGFLAAAAEYP-- 346 (485)
T ss_dssp HHHTCCCCTTSCEEEEEEEESGGGCHHHHHHHHHHHHHT--T----CEEEEEEEE-----CH--HHHHHHHHHHHHST--
T ss_pred HHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHC--C----CEEEEEECC-----CH--HHHHHHHHHHHHCC--
T ss_conf 871988899973999966675435879999999998627--9----489999289-----56--78999999997579--
Q ss_pred CCCCCCCCEEEECCCCCHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCC--C-------
Q ss_conf 5988843389946889988999999866689987897668814887766036998439991887810003--8-------
Q 003508 310 FGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--G------- 380 (814)
Q Consensus 310 ~g~~~~~~v~~~~~~i~~~el~aly~~ADv~v~tS~~EG~~Lv~lEama~~~~~~g~lVlS~~~G~~~~l--g------- 380 (814)
..|+++.|. +.+++..+|+.||++|+||.+||||++.+|||||| .|+|+|+.+|..+.+ +
T Consensus 347 ------~~v~~~~g~-~~~~~~~~~~~adv~v~pS~~E~~g~~~lEAma~G----~PvI~s~~gg~~e~v~~~~~~~~~~ 415 (485)
T 2qzs_A 347 ------GQVGVQIGY-HEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYG----TLPLVRRTGGLADTVSDCSLENLAD 415 (485)
T ss_dssp ------TTEEEEESC-CHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHT----CEEEEESSHHHHHHCCBCCHHHHHT
T ss_pred ------CCEEEECCC-CHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHCC----CCEEECCCCCCCCEECCCCCCCCCC
T ss_conf ------938994789-97999999975889997885678767999999779----9779878998325521576443444
Q ss_pred --CCEEEECCCCHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
Q ss_conf --96399899999999999999944--999999999998857998739999999999999984887
Q 003508 381 --AGAILVNPWNITEVANAIARALN--MSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVE 442 (814)
Q Consensus 381 --~~~~lvnP~d~~~lA~ai~~~L~--~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~~~ 442 (814)
.+|++|+|.|++++|++|.+++. ..++.+.++..++++ +.|++...++.++.-..+...+
T Consensus 416 ~~~~G~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~--~~fs~~~~~~~~~~ly~~~~~~ 479 (485)
T 2qzs_A 416 GVASGFVFEDSNAWSLLRAIRRAFVLWSRPSLWRFVQRQAMA--MDFSWQVAAKSYRELYYRLKLE 479 (485)
T ss_dssp TCCCBEEECSSSHHHHHHHHHHHHHHHTSHHHHHHHHHHHHH--CCCCHHHHHHHHHHHHHHHC--
T ss_pred CCCCEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH--HCCCHHHHHHHHHHHHHHHHHH
T ss_conf 666459977899999999999999870899999999999876--3289899999999999986542
No 8
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=1.00 E-value=1 Score=212.39 Aligned_cols=298 Identities=17% Similarity=0.173 Sum_probs=214.8
Q ss_pred HCCCCCEEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCCCHHH-HCCC----CC-CHHHHH-HHHHCCEEEEECHHHHH
Q ss_conf 48999899991965015999999618998199798158995444-5049----88-579999-97624477571388899
Q 003508 105 HYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEI-HRTL----PS-RSDLLR-AVLAADLVGFHTYDYAR 177 (814)
Q Consensus 105 ~~~~~DiI~ihdyhl~llp~~lr~~~~~~~i~~f~H~Pfp~~e~-fr~l----p~-~~~il~-~ll~aD~I~f~~~~~~~ 177 (814)
..+..|+|++|++....++.++.+. ...++.+..|..++.... +... +. +..+.+ .+..+|.|.+.+....+
T Consensus 119 ~~~~~Div~~~~~~~~~~~~~~~~~-~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~ 197 (438)
T 3c48_A 119 EKVTYDLIHSHYWLSGQVGWLLRDL-WRIPLIHTAHTLAAVKNSYRDDSDTPESEARRICEQQLVDNADVLAVNTQEEMQ 197 (438)
T ss_dssp HTCCCSEEEEEHHHHHHHHHHHHHH-HTCCEEEECSSCHHHHSCC----CCHHHHHHHHHHHHHHHHCSEEEESSHHHHH
T ss_pred CCCCCCEEEECCCCHHHHHHHHHHH-CCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCHHHHH
T ss_conf 1689998994775578999999997-499989994277401111100267731578999999998408999984799999
Q ss_pred HHHHHHHHHHCCCCCCCCEEECCEEEEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHH---CCCEEEEEECCCCCCCC
Q ss_conf 999999988375358992352893789999613569256656613991499999999992---89819999305444689
Q 003508 178 HFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKG 254 (814)
Q Consensus 178 ~Fl~~~~~~l~~~~~~~~i~~~g~~~~v~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~VgRl~~~KG 254 (814)
.+.. .++. ...++.++|+|+|.+.|.+... .....+++++ .++++|+++||+.+.||
T Consensus 198 ~~~~----~~g~-----------~~~k~~vi~ngvd~~~~~~~~~-----~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg 257 (438)
T 3c48_A 198 DLMH----HYDA-----------DPDRISVVSPGADVELYSPGND-----RATERSRRELGIPLHTKVVAFVGRLQPFKG 257 (438)
T ss_dssp HHHH----HHCC-----------CGGGEEECCCCCCTTTSCCC---------CHHHHHHTTCCSSSEEEEEESCBSGGGC
T ss_pred HHHH----HHCC-----------CHHHEEEECCCCCCCCCCCCCC-----CHHHHHHHHCCCCCCCCEEEEEEEECCCCC
T ss_conf 9999----8589-----------8202688269766110478662-----024566886089989848999743156679
Q ss_pred HHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHH
Q ss_conf 78999999998986846658667999963999993789999999999999850345988843389946889988999999
Q 003508 255 IPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALY 334 (814)
Q Consensus 255 i~~~l~A~~~ll~~~P~~~~~v~Lv~i~~p~~~~~~~y~~l~~~l~~lv~~iN~~~g~~~~~~v~~~~~~i~~~el~aly 334 (814)
++.+++|+..+.+++|+. ++.|+++|.+.. +++ +.+++++++.+.+.. ..|. +.|+++.+++..+|
T Consensus 258 ~~~li~a~~~l~~~~p~~--~~~l~i~G~~~~-~g~----~~~~l~~~~~~~~l~------~~v~-~~g~~~~~~~~~~~ 323 (438)
T 3c48_A 258 PQVLIKAVAALFDRDPDR--NLRVIICGGPSG-PNA----TPDTYRHMAEELGVE------KRIR-FLDPRPPSELVAVY 323 (438)
T ss_dssp HHHHHHHHHHHHHHCTTC--SEEEEEECCBC-----------CHHHHHHHHTTCT------TTEE-EECCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCC--CEEEEEEECCCC-CCC----HHHHHHHHHHHCCCC------CCEE-ECCCCCHHHHHHHH
T ss_conf 899999999999639776--669999818887-772----789999999971987------8689-85889858899999
Q ss_pred HHCCEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCC--CCCEEEECCCCHHHHHHHHHHHHCCCHHHHHHH
Q ss_conf 866689987897668814887766036998439991887810003--896399899999999999999944999999999
Q 003508 335 AVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKR 412 (814)
Q Consensus 335 ~~ADv~v~tS~~EG~~Lv~lEama~~~~~~g~lVlS~~~G~~~~l--g~~~~lvnP~d~~~lA~ai~~~L~~~~~er~~r 412 (814)
+.||++|+||..|||+++.+|||+|+ .|+|+|+.+|..+.+ +.+|++++|.|+++++++|.+++.+ ++.+.++
T Consensus 324 ~~adv~v~ps~~e~~~~~~~Eama~G----~PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~-~~~~~~~ 398 (438)
T 3c48_A 324 RAADIVAVPSFNESFGLVAMEAQASG----TPVIAARVGGLPIAVAEGETGLLVDGHSPHAWADALATLLDD-DETRIRM 398 (438)
T ss_dssp HHCSEEEECCSCCSSCHHHHHHHHTT----CCEEEESCTTHHHHSCBTTTEEEESSCCHHHHHHHHHHHHHC-HHHHHHH
T ss_pred HHCCEEEECCCCCCCCHHHHHHHHCC----CCEEECCCCCHHHHHHCCCCEEECCCCCHHHHHHHHHHHHCC-HHHHHHH
T ss_conf 85899998740268755999998769----988962798725775079727987999999999999999759-8999999
Q ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
Q ss_conf 998857998739999999999999984887
Q 003508 413 HWHNFTHVTTHTAQEWAETFVSELNDTVVE 442 (814)
Q Consensus 413 ~~~~~~~v~~~~~~~W~~~fl~~l~~~~~~ 442 (814)
..++++.+..|++...++.++..+.++...
T Consensus 399 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 428 (438)
T 3c48_A 399 GEDAVEHARTFSWAATAAQLSSLYNDAIAN 428 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf 999999988579999999999999998631
No 9
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=1.00 E-value=1 Score=210.03 Aligned_cols=301 Identities=16% Similarity=0.168 Sum_probs=208.8
Q ss_pred CCCCEEEEECCCCHHHHHHHHHH-CCCCEEEEEEECCCCCH----HHHCC--CCC-------------CHHHHHHHHHCC
Q ss_conf 99989999196501599999961-89981997981589954----44504--988-------------579999976244
Q 003508 107 KDGDVVWCHDYHLMFLPKCLKEY-NSDMKVGWFLHTPFPSS----EIHRT--LPS-------------RSDLLRAVLAAD 166 (814)
Q Consensus 107 ~~~DiI~ihdyhl~llp~~lr~~-~~~~~i~~f~H~Pfp~~----e~fr~--lp~-------------~~~il~~ll~aD 166 (814)
...|+||+|+++..+++.++++. ....+++++.|..++.. ..+.. ++. ....-..+..+|
T Consensus 129 ~~~DiIh~~~~~~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad 208 (485)
T 1rzu_A 129 WRPDMVHAHDWQAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTAT 208 (485)
T ss_dssp CCCSEEEEEHHHHTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHHCS
T ss_pred CCCCEEEECCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHCCCCHHHCCCCCCCCCCCCCHHHHHHHHCC
T ss_conf 99988996463055789997310358997899966754468788778734399803202000132562359998886467
Q ss_pred EEEEECHHHHHHHHHHHHHHHCCCCCCCCEEECCEEEEEEEEECCCCHHHHHHHHCC-----------CCHHHHHHHHHH
Q ss_conf 775713888999999999883753589923528937899996135692566566139-----------914999999999
Q 003508 167 LVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEI-----------NPVQVHIKELQE 235 (814)
Q Consensus 167 ~I~f~~~~~~~~Fl~~~~~~l~~~~~~~~i~~~g~~~~v~v~p~GId~~~f~~~~~~-----------~~~~~~~~~lr~ 235 (814)
.|...+....+.+... .++.... .. ......++.++|+|||.+.|.+.... +...+....+++
T Consensus 209 ~vi~~S~~~~~~~~~~---~~g~~~~-~~--~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 282 (485)
T 1rzu_A 209 ALSTVSPSYAEEILTA---EFGMGLE-GV--IGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAE 282 (485)
T ss_dssp EEEESCHHHHHHTTSH---HHHTTCH-HH--HHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHH
T ss_pred EEEECCHHHHHHHHCC---CCCCCHH-HH--HHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 7996087589998354---3576658-99--9860688169708986020588665110001243244567886999999
Q ss_pred HHC----CCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 928----9819999305444689789999999989868466586679999639999937899999999999998503459
Q 003508 236 TFA----GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFG 311 (814)
Q Consensus 236 ~~~----~~~iIl~VgRl~~~KGi~~~l~A~~~ll~~~P~~~~~v~Lv~i~~p~~~~~~~y~~l~~~l~~lv~~iN~~~g 311 (814)
+++ ++++|++|||+.+.||++.+++|+..+.+. ++.|+++|.+ +. .+.+++++++.+.+
T Consensus 283 ~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~------~~~l~ivG~g-----~~--~~~~~l~~~~~~~~---- 345 (485)
T 1rzu_A 283 HFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVSL------GGRLVVLGAG-----DV--ALEGALLAAASRHH---- 345 (485)
T ss_dssp HHTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHHT------TCEEEEEECB-----CH--HHHHHHHHHHHHTT----
T ss_pred HCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHC------CCEEEEEECC-----CH--HHHHHHHHHHHHCC----
T ss_conf 6298889983999972575312879999999998726------9569999689-----46--89999999998678----
Q ss_pred CCCCCCEEEECCCCCHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCC--C---------
Q ss_conf 88843389946889988999999866689987897668814887766036998439991887810003--8---------
Q 003508 312 TLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--G--------- 380 (814)
Q Consensus 312 ~~~~~~v~~~~~~i~~~el~aly~~ADv~v~tS~~EG~~Lv~lEama~~~~~~g~lVlS~~~G~~~~l--g--------- 380 (814)
..|+++.|. +.+++..+|+.||++|+||.+||||++.+|||||| .|+|+|+.+|..+.+ +
T Consensus 346 ----~~v~~~~g~-~~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G----~PvI~s~~gg~~e~v~~~~~~~~~~~~ 416 (485)
T 1rzu_A 346 ----GRVGVAIGY-NEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYG----CIPVVARTGGLADTVIDANHAALASKA 416 (485)
T ss_dssp ----TTEEEEESC-CHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHT----CEEEEESSHHHHHHCCBCCHHHHHTTC
T ss_pred ----CCEEEECCC-CHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHCC----CCEEEECCCCHHHEECCCCCCCCCCCC
T ss_conf ----868994389-97999999852999997844688777999999779----977980899831132156533234567
Q ss_pred CCEEEECCCCHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
Q ss_conf 96399899999999999999944--99999999999885799873999999999999998488
Q 003508 381 AGAILVNPWNITEVANAIARALN--MSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVV 441 (814)
Q Consensus 381 ~~~~lvnP~d~~~lA~ai~~~L~--~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~~ 441 (814)
.+|++|+|.|++++|++|.+++. ..++.+.++..++++ +.|++...++.++....++.+
T Consensus 417 ~~G~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~--~~fs~~~~~~~~~~~y~~~~~ 477 (485)
T 1rzu_A 417 ATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLGMK--SDVSWEKSAGLYAALYSQLIS 477 (485)
T ss_dssp CCBEEESSCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHT--CCCBHHHHHHHHHHHHHHHTC
T ss_pred CCCEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH--HHCCHHHHHHHHHHHHHHHHC
T ss_conf 7634867899999999999999872799999999999998--868969999999999998637
No 10
>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15
Probab=1.00 E-value=1 Score=209.16 Aligned_cols=227 Identities=15% Similarity=0.231 Sum_probs=167.8
Q ss_pred CEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCCCEEECCCCE
Q ss_conf 91999926876589988999888501121029896699999985319994599992899678998411039369801857
Q 003508 468 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGM 547 (814)
Q Consensus 468 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~L~~~~~~~~l~liaehG~ 547 (814)
.++|++|+||||++...+| ....++++++++|++|++. | .|+|+|||++..+.+++..+ +++|++||+
T Consensus 1 ikli~~DlDGTLl~~~~~~---------~~~~i~~~~~~al~~l~~~-g-~v~iaTGR~~~~~~~~~~~l-~~~I~~nGa 68 (239)
T 1u02_A 1 MSLIFLDYDGTLVPIIMNP---------EESYADAGLLSLISDLKER-F-DTYIVTGRSPEEISRFLPLD-INMICYHGA 68 (239)
T ss_dssp -CEEEEECBTTTBCCCSCG---------GGCCCCHHHHHHHHHHHHH-S-EEEEECSSCHHHHHHHSCSS-CEEEEGGGT
T ss_pred CEEEEEECCCCCCCCCCCC---------CCCCCCHHHHHHHHHHHCC-C-CEEEEECCCHHHHHHHHCCC-HHEEEECCE
T ss_conf 9699991588776898894---------5577897899999998349-9-99999498999999986012-240788788
Q ss_pred EEEECCCCEEECCCCCCCHHH-HHHHHHHHHHHHCCCCCCEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 998289820012655479578-9889999999760599813320263389970257713337779999999812998999
Q 003508 548 FLRCTTGKWMTTMPEHLNMEW-VDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNA 626 (814)
Q Consensus 548 ~i~~~~~~~~~~~~~~~~~~w-~~~v~~i~~~~~~~~~Gs~iE~K~~~i~~hyr~ad~e~~~~~a~el~~~l~~~~~~~~ 626 (814)
++.. ++.+....+......+ .+.+..+++.. .+.++.+++.++..+.+||+..++ .......++...+ ... .
T Consensus 69 ~i~~-~~~~~~~~~~~~~~~l~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l-~~~---~ 141 (239)
T 1u02_A 69 CSKI-NGQIVYNNGSDRFLGVFDRIYEDTRSWV-SDFPGLRIYRKNLAVLYHLGLMGA-DMKPKLRSRIEEI-ARI---F 141 (239)
T ss_dssp EEEE-TTEEEECTTGGGGHHHHHHHHHHHTTHH-HHSTTCEEEEETTEEEEECTTSCS-TTHHHHHHHHHHH-HHH---H
T ss_pred EEEE-CCEEEECCCCCCCCHHHHHHHHHHHHHH-HHCCCCEEEECCCEEEEECCCCCH-HHHHHHHHHHHHH-HCC---C
T ss_conf 9961-8824303454234125699999999998-318994899528889998288986-5899999999987-405---8
Q ss_pred CEEEEECCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 64999949199999789999999999999834156589997559998179999599997636789999999998898887
Q 003508 627 SVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEPELPDDGPGIPRTRPTDA 706 (814)
Q Consensus 627 ~~~v~~g~~~vEI~p~~~nKG~ai~~ll~~~~~~~~~~~~~d~vi~iGD~d~tDE~mF~~~~~~~~~~~~~~~~~~~~~~ 706 (814)
++.+..+..++||.|+++|||.|+++|++.+ . +++||| +.||++||+.++
T Consensus 142 ~~~~~~~~~~lei~~~~~~Kg~al~~l~~~~--------g---via~GD-~~ND~~Ml~~a~------------------ 191 (239)
T 1u02_A 142 GVETYYGKMIIELRVPGVNKGSAIRSVRGER--------P---AIIAGD-DATDEAAFEAND------------------ 191 (239)
T ss_dssp TCEEEECSSEEEEECTTCCHHHHHHHHHTTS--------C---EEEEES-SHHHHHHHHTTT------------------
T ss_pred CCEEEECCCEEEEECCCCCHHHHHHHHHHHC--------C---EEEEEC-CCCCHHHHHHHH------------------
T ss_conf 9589937768999869998899999998638--------8---499958-875699999752------------------
Q ss_pred CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCC
Q ss_conf 67851011133330268865555877788898888889988888778998866433135898725999967987633432
Q 003508 707 IKVPGERRQALKVASRGSSKISQGKTQRPAQAPEKKTPNHNCTNVRQPSSDKTSYNVLDLNKENYFSCAVGRPRTNARFL 786 (814)
Q Consensus 707 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~VG~~~t~A~~~ 786 (814)
.+++|.||..++.|+|.
T Consensus 192 ---------------------------------------------------------------~g~~vam~Na~~~A~~v 208 (239)
T 1u02_A 192 ---------------------------------------------------------------DALTIKVGEGETHAKFH 208 (239)
T ss_dssp ---------------------------------------------------------------TSEEEEESSSCCCCSEE
T ss_pred ---------------------------------------------------------------CCCEEEECCCCCCCEEE
T ss_conf ---------------------------------------------------------------88189989988744189
Q ss_pred CCC---HHHHHHHHHHHHHCCCC
Q ss_conf 389---57999999996510398
Q 003508 787 LQS---SDEVVSFLKKLADASSS 806 (814)
Q Consensus 787 l~~---~~~v~~~L~~l~~~~~~ 806 (814)
+.+ .+.|..+|+.+.....+
T Consensus 209 ~~~~~~~~gV~~~l~~~~~~~~~ 231 (239)
T 1u02_A 209 VADYIEMRKILKFIEMLGVQKKQ 231 (239)
T ss_dssp ESSHHHHHHHHHHHHHHHHHHC-
T ss_pred ECCCCCHHHHHHHHHHHHHHCCC
T ss_conf 68988789999999999985346
Done!