Query 003510
Match_columns 814
No_of_seqs 575 out of 2787
Neff 7.8
Searched_HMMs 29240
Date Tue Mar 26 18:15:29 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/003510.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1558-1562//hhsearch_pdb/003510hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3h6l_A Histone-lysine N-methyl 1.0 1 1 298.4 14.4 159 635-794 102-261 (278)
2 2w5y_A Histone-lysine N-methyl 1.0 1 1 294.1 16.0 158 631-790 33-192 (192)
3 3ooi_A Histone-lysine N-methyl 1.0 1 1 289.7 14.7 155 635-790 77-232 (232)
4 3ope_A Probable histone-lysine 1.0 1 1 283.8 13.3 158 635-794 58-218 (222)
5 1ml9_A Histone H3 methyltransf 1.0 1 1 279.3 11.4 155 635-790 118-302 (302)
6 1mvh_A Cryptic LOCI regulator 1.0 1 1 277.7 11.7 154 635-791 122-299 (299)
7 3bo5_A Histone-lysine N-methyl 1.0 1 1 277.4 11.7 155 635-792 111-288 (290)
8 2r3a_A Histone-lysine N-methyl 1.0 1 1 277.4 11.8 153 635-790 125-300 (300)
9 3hna_A Histone-lysine N-methyl 1.0 1 1 272.8 7.5 144 636-788 133-287 (287)
10 2wzo_A Transforming growth fac 1.0 1 1 257.8 12.8 142 176-329 1-144 (146)
No 1
>3h6l_A Histone-lysine N-methyltransferase SETD2; SET domain-containing protein 2, S-adenos methionine, structural genomics, structural genomics consor SGC; HET: SAM; 1.99A {Homo sapiens} PDB: 4fmu_A* 4h12_A*
Probab=1.00 E-value=1 Score=298.43 Aligned_cols=159 Identities=26% Similarity=0.491 Sum_probs=146.7
Q ss_pred CCHHHHHHHHHHCCCEEEEEEEECCCCEEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCE
Q ss_conf 66344628875503033999984035803886001799996996259102876896667777620259840478718831
Q 003510 635 LSMADKYKHMKETFRKRLAFGKSGIHGFGIFAKHPHRAGDMVIEYTGELVRPSIADRREHFIYNSLVGAGTYMFRIDDER 714 (814)
Q Consensus 635 ~~~~~~~~~l~~~~~~~~~v~~s~~~G~Gl~a~~~i~~g~~I~ey~Geii~~~~~~~r~~~~~~~~~~~~~y~~~~~~~~ 714 (814)
++..|.|+.+|++...++.|.+++++||||||+++|++|+||+||+|++++..+++.|... |......+.|++.++.+.
T Consensus 102 C~~~C~Nr~~q~g~~~~leV~~t~~kG~Gl~A~~~I~~G~~I~EY~Gevi~~~e~~~R~~~-y~~~~~~~~y~~~l~~~~ 180 (278)
T 3h6l_A 102 NGDYCSNRRFQRKQHADVEVILTEKKGWGLRAAKDLPSNTFVLEYCGEVLDHKEFKARVKE-YARNKNIHYYFMALKNDE 180 (278)
T ss_dssp TGGGCSSCTTTTTCCCCEEEEECSSSCEEEEESSCBCTTCEEEECCCEEECHHHHHHHHHH-HHHTTCCCCCEEEEETTE
T ss_pred CCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCEEEEEEEEECCHHHHHHHHHH-HHHCCCCCCEEECCCCCE
T ss_conf 6887788322678865779997699812898687437998867740264478999999999-875137661120256873
Q ss_pred EEECCCCCCCCCCCCCCCCCCEEEEEEEECCEEEEEEEECCCCCCCCEEEEECCCCCCC-CCEEEEECCCCCCCCCCCCH
Q ss_conf 99324468801136698999915899997891499999947999998166717999989-99465409999810157982
Q 003510 715 VIDATRAGSIAHLINHSCEPNCYSRVISVNGDEHIIIFAKRDIKQWEELTYDYRFFSID-EQLACYCGFPRCRGVVNDTE 793 (814)
Q Consensus 715 ~iDa~~~Gn~aRfiNHSC~PN~~~~~~~~~~~~~i~i~A~r~I~~GeELT~dY~~~~~~-~~~~C~Cg~~~Cr~~~~~~~ 793 (814)
+|||+.+||+||||||||+|||.+..+.+++..+|+|||+|||.+||||||||+++..+ ..+.|+||+++|||+|.+..
T Consensus 181 ~IDa~~~GN~aRFiNHSC~PN~~~~~~~v~g~~ri~~fA~RdI~~GEELT~dY~~~~~~~~~~~C~CGs~~Crg~l~~~~ 260 (278)
T 3h6l_A 181 IIDATQKGNCSRFMNHSCEPNCETQKWTVNGQLRVGFFTTKLVPSGSELTFDYQFQRYGKEAQKCFCGSANCRGYLGGEN 260 (278)
T ss_dssp EEECSSEECGGGGCEECSSCSEEEEEEEETTEEEEEEEESSCBCTTCBCEECCTTTEECSSCEECCCCCTTCCSEECCC-
T ss_pred EEECCCCCCHHHHCCCCCCCCCEEEEEEECCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCEEECCCCCCEEECCCCC
T ss_conf 88675347715510247798810489974895289999898328999798836988478887674789998961247898
Q ss_pred H
Q ss_conf 6
Q 003510 794 A 794 (814)
Q Consensus 794 ~ 794 (814)
.
T Consensus 261 ~ 261 (278)
T 3h6l_A 261 R 261 (278)
T ss_dssp -
T ss_pred C
T ss_conf 6
No 2
>2w5y_A Histone-lysine N-methyltransferase HRX; transcription regulation, chromosomal rearrangement, protein lysine methyltransferase, proto-oncogene; HET: SAH; 2.00A {Homo sapiens} PDB: 2w5z_A*
Probab=1.00 E-value=1 Score=294.11 Aligned_cols=158 Identities=50% Similarity=0.912 Sum_probs=145.0
Q ss_pred CCCCCCHHHHHHHHHHCCCEEEEEEEECCCCEEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEEC
Q ss_conf 98756634462887550303399998403580388600179999699625910287689666777762025984047871
Q 003510 631 APNFLSMADKYKHMKETFRKRLAFGKSGIHGFGIFAKHPHRAGDMVIEYTGELVRPSIADRREHFIYNSLVGAGTYMFRI 710 (814)
Q Consensus 631 ~~~~~~~~~~~~~l~~~~~~~~~v~~s~~~G~Gl~a~~~i~~g~~I~ey~Geii~~~~~~~r~~~~~~~~~~~~~y~~~~ 710 (814)
++..+++.+++++||++.+..+.|.+|+++||||||+++|++|++|+||+|++++..+++.|+.. |+. .+.+.|+|.+
T Consensus 33 ~~~~~~~~~~~~~l~~~~~~~l~V~~s~~~G~GlfA~~~I~~G~~I~EY~Gevi~~~e~~~R~~~-y~~-~~~~~Y~f~l 110 (192)
T 2w5y_A 33 TSMDLPMPMRFRHLKKTSKEAVGVYRSPIHGRGLFCKRNIDAGEMVIEYAGNVIRSIQTDKREKY-YDS-KGIGCYMFRI 110 (192)
T ss_dssp GGSSCCHHHHHTTHHHHHHHHEEEEECSSSSEEEEESSCBCTTCEEEECCSEEEEGGGHHHHHHH-HHH-HTCCCCEEEC
T ss_pred CCCCCCCCHHHHHHHCCCCCCEEEEECCCCEEEEEECCCCCCCCEEEEEEEEEECHHHHHHHHHH-HHH-CCCCEEEEEE
T ss_conf 46889830468997466877589998589236999896357999999860167346778888877-764-4882466550
Q ss_pred CCCEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCEEEEEEEECCCCCCCCEEEEECCCCCCC--CCEEEEECCCCCCCC
Q ss_conf 883199324468801136698999915899997891499999947999998166717999989--994654099998101
Q 003510 711 DDERVIDATRAGSIAHLINHSCEPNCYSRVISVNGDEHIIIFAKRDIKQWEELTYDYRFFSID--EQLACYCGFPRCRGV 788 (814)
Q Consensus 711 ~~~~~iDa~~~Gn~aRfiNHSC~PN~~~~~~~~~~~~~i~i~A~r~I~~GeELT~dY~~~~~~--~~~~C~Cg~~~Cr~~ 788 (814)
+...+|||+..||++|||||||+|||.++.+.+++..+|+|+|+|||++|||||+||++..++ ..|.|.||+++|||+
T Consensus 111 ~~~~~IDa~~~Gn~arfiNHSC~PN~~~~~~~~~g~~~i~i~A~rdI~~GEELt~dY~~~~~~~~~~~~C~Cgs~~Crg~ 190 (192)
T 2w5y_A 111 DDSEVVDATMHGNAARFINHSCEPNCYSRVINIDGQKHIVIFAMRKIYRGEELTYDYKFPIEDASNKLPCNCGAKKCRKF 190 (192)
T ss_dssp SSSEEEECTTTCCGGGGCEECSSCSEEEEEEEETTEEEEEEEESSCBCTTCEEEECCCC-------CCBCCCCCTTCCSB
T ss_pred CCCEEEECCCCCCHHHHHCCCCCCCEEEEEEEECCCEEEEEEECCCCCCCCEEEEECCCCHHCCCCCCEEECCCCCCCCC
T ss_conf 47608979645682673065889998889999799279999999624999999887298035378983567989878684
Q ss_pred CC
Q ss_conf 57
Q 003510 789 VN 790 (814)
Q Consensus 789 ~~ 790 (814)
||
T Consensus 191 ln 192 (192)
T 2w5y_A 191 LN 192 (192)
T ss_dssp CC
T ss_pred CC
T ss_conf 87
No 3
>3ooi_A Histone-lysine N-methyltransferase, H3 lysine-36 lysine-20 specific; SET domain, S-adenosyl-L methionine; HET: SAM; 1.75A {Homo sapiens}
Probab=1.00 E-value=1 Score=289.69 Aligned_cols=155 Identities=30% Similarity=0.545 Sum_probs=142.5
Q ss_pred CCHHHHHHHHHHCCCEEEEEEEECCCCEEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCE
Q ss_conf 66344628875503033999984035803886001799996996259102876896667777620259840478718831
Q 003510 635 LSMADKYKHMKETFRKRLAFGKSGIHGFGIFAKHPHRAGDMVIEYTGELVRPSIADRREHFIYNSLVGAGTYMFRIDDER 714 (814)
Q Consensus 635 ~~~~~~~~~l~~~~~~~~~v~~s~~~G~Gl~a~~~i~~g~~I~ey~Geii~~~~~~~r~~~~~~~~~~~~~y~~~~~~~~ 714 (814)
+...|+|+.+|++...+++|++++++||||||+++|++|++|+||+|++++..+++.|... +........|+|.++.++
T Consensus 77 c~~~C~Nr~~q~~~~~~lev~~t~~kG~Gl~A~~~I~~G~~I~ey~Gevi~~~e~~~r~~~-~~~~~~~~~y~~~l~~~~ 155 (232)
T 3ooi_A 77 AGGRCQNQCFSKRQYPEVEIFRTLQRGWGLRTKTDIKKGEFVNEYVGELIDEEECRARIRY-AQEHDITNFYMLTLDKDR 155 (232)
T ss_dssp TGGGCCCCHHHHTCCCCEEEEECSSSSEEEEESSCBCTTCEEEECCEEEECHHHHHHHHHH-HHHTTCCCCCEEEEETTE
T ss_pred CCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCEECCCCEEEEEEEECCCHHHHHHHHHH-HHHCCCCCEEEEECCCCE
T ss_conf 9877688440478876679998689601898796265882256753220688999888887-764377732665057634
Q ss_pred EEECCCCCCCCCCCCCCCCCCEEEEEEEECCEEEEEEEECCCCCCCCEEEEECCCCCCC-CCEEEEECCCCCCCCCC
Q ss_conf 99324468801136698999915899997891499999947999998166717999989-99465409999810157
Q 003510 715 VIDATRAGSIAHLINHSCEPNCYSRVISVNGDEHIIIFAKRDIKQWEELTYDYRFFSID-EQLACYCGFPRCRGVVN 790 (814)
Q Consensus 715 ~iDa~~~Gn~aRfiNHSC~PN~~~~~~~~~~~~~i~i~A~r~I~~GeELT~dY~~~~~~-~~~~C~Cg~~~Cr~~~~ 790 (814)
+|||+.+||+||||||||+|||.++.+.+++..+|+|||+|||.+||||||||+++..+ .++.|+||+++|||+|+
T Consensus 156 ~IDa~~~Gn~aRfiNHSC~PN~~~~~~~~~~~~~i~~~A~RdI~~GEELT~dY~~~~~~~~~~~C~CGs~~CrG~lG 232 (232)
T 3ooi_A 156 IIDAGPKGNYARFMNHCCQPNCETQKWSVNGDTRVGLFALSDIKAGTELTFNYNLECLGNGKTVCKCGAPNCSGFLG 232 (232)
T ss_dssp EEEEEEEECGGGGCEECSSCSEEEEEEEETTEEEEEEEESSCBCTTCBCEECCTTCSTTCTTCBCCCCCTTCCSBCC
T ss_pred EEECCCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCEEECCCCCCCCCCC
T ss_conf 77123356532122136899847899998993389999897509999898888998578887475797976818679
No 4
>3ope_A Probable histone-lysine N-methyltransferase ASH1L; SET, nucleus; HET: SAM; 2.90A {Homo sapiens}
Probab=1.00 E-value=1 Score=283.83 Aligned_cols=158 Identities=35% Similarity=0.584 Sum_probs=140.9
Q ss_pred CCHHHHHHHHHHCCC-EEEEEEEECCCCEEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCC
Q ss_conf 663446288755030-3399998403580388600179999699625910287689666777762025984047871883
Q 003510 635 LSMADKYKHMKETFR-KRLAFGKSGIHGFGIFAKHPHRAGDMVIEYTGELVRPSIADRREHFIYNSLVGAGTYMFRIDDE 713 (814)
Q Consensus 635 ~~~~~~~~~l~~~~~-~~~~v~~s~~~G~Gl~a~~~i~~g~~I~ey~Geii~~~~~~~r~~~~~~~~~~~~~y~~~~~~~ 713 (814)
++..|.|+.+|++.. ..+++.+++.+||||||+++|++|++|+||+|++++..++..|....+. .....|+|.++.+
T Consensus 58 C~~~C~Nr~~q~~~~~~~lev~~t~~kG~Gl~A~~~I~~G~~I~ey~Gevi~~~e~~~r~~~~~~--~~~~~y~~~l~~~ 135 (222)
T 3ope_A 58 CGEQCCNQRIQRHEWVQCLERFRAEEKGWGIRTKEPLKAGQFIIEYLGEVVSEQEFRNRMIEQYH--NHSDHYCLNLDSG 135 (222)
T ss_dssp TTTSCSSCTTTTTCCCSCCEEEECTTSSEEEECSSCBCTTCEEEECCSEEECHHHHHHHHHHTST--TCCSCCEEEEETT
T ss_pred CCCCCCCCEEECCCCCCCEEEEECCCCCEEEEECCEECCCCEEEEECCEECCHHHHHHHHHHHHC--CCCCEEEEECCCC
T ss_conf 98777984193787465379998189752898785087998989953601278999998998741--3687478746899
Q ss_pred EEEECCCCCCCCCCCCCCCCCCEEEEEEEECCEEEEEEEECCCCCCCCEEEEECCCCCCC--CCEEEEECCCCCCCCCCC
Q ss_conf 199324468801136698999915899997891499999947999998166717999989--994654099998101579
Q 003510 714 RVIDATRAGSIAHLINHSCEPNCYSRVISVNGDEHIIIFAKRDIKQWEELTYDYRFFSID--EQLACYCGFPRCRGVVND 791 (814)
Q Consensus 714 ~~iDa~~~Gn~aRfiNHSC~PN~~~~~~~~~~~~~i~i~A~r~I~~GeELT~dY~~~~~~--~~~~C~Cg~~~Cr~~~~~ 791 (814)
++|||+.+||+||||||||+|||.+..+.+++..+|+|||+|||++||||||||++..++ ..+.|+||+++|||+|++
T Consensus 136 ~~IDa~~~Gn~aRfiNHSC~PN~~~~~~~~~~~~~i~~~A~RdI~~GEELT~dY~~~~~~~~~~~~C~CGs~~Crg~i~~ 215 (222)
T 3ope_A 136 MVIDSYRMGNEARFINHSCDPNCEMQKWSVNGVYRIGLYALKDMPAGTELTYDYNFHSFNVEKQQLCKCGFEKCRGIIGG 215 (222)
T ss_dssp EEEECSSEECGGGGCEECSSCSEEEEEEEETTEEEEEEEESSCBCTTCBCEECTTSSBCCCSCCCBCCCCCTTCCSBCC-
T ss_pred EEEECCCCCCCCEEECCCCCCCEEEEEEEECCEEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCEEECCCCCCCCCCCC
T ss_conf 79958523212001126899985769999899579999989705999999997788635881878845888678875479
Q ss_pred CHH
Q ss_conf 826
Q 003510 792 TEA 794 (814)
Q Consensus 792 ~~~ 794 (814)
.+.
T Consensus 216 ~~q 218 (222)
T 3ope_A 216 KSQ 218 (222)
T ss_dssp ---
T ss_pred CCC
T ss_conf 874
No 5
>1ml9_A Histone H3 methyltransferase DIM-5; adoMet-dependent methyltransferase histone H3 lysine- 9 methylation; 1.98A {Neurospora crassa} SCOP: b.85.7.1 PDB: 1peg_A*
Probab=1.00 E-value=1 Score=279.28 Aligned_cols=155 Identities=26% Similarity=0.380 Sum_probs=132.5
Q ss_pred CCHHHHHHHHHHCCCEEEEEEEECCCCEEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCC--
Q ss_conf 663446288755030339999840358038860017999969962591028768966677776202598404787188--
Q 003510 635 LSMADKYKHMKETFRKRLAFGKSGIHGFGIFAKHPHRAGDMVIEYTGELVRPSIADRREHFIYNSLVGAGTYMFRIDD-- 712 (814)
Q Consensus 635 ~~~~~~~~~l~~~~~~~~~v~~s~~~G~Gl~a~~~i~~g~~I~ey~Geii~~~~~~~r~~~~~~~~~~~~~y~~~~~~-- 712 (814)
++..|.|+.+|++.+.++.|.+++.+||||||+++|++|+||+||+||+++..+++.|... |......+.|+|.++.
T Consensus 118 C~~~C~Nr~~q~g~~~~l~v~~t~~kG~Gv~A~~~I~~G~~I~EY~Gevi~~~e~~~R~~~-~~~~~~~~~Y~f~l~~~~ 196 (302)
T 1ml9_A 118 CSKDCPNRVVERGRTVPLQIFRTKDRGWGVKCPVNIKRGQFVDRYLGEIITSEEADRRRAE-STIARRKDVYLFALDKFS 196 (302)
T ss_dssp SCTTCTTCHHHHCCCSCEEEEECSSSCEEEECSSCBCTTCEEEECCCEEECHHHHHHHHHH-SCGGGCHHHHEEECCSSC
T ss_pred CCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCEECCCCEEEEEEEEEECHHHHHHHHHH-HHHHCCCCEEEEEECCCC
T ss_conf 7999998100268712669998489930897897068989989994578379998888877-764058965898833556
Q ss_pred ------------CEEEECCCCCCCCCCCCCCCCCCEEEEEEEEC----CEEEEEEEECCCCCCCCEEEEECCCCCCC---
Q ss_conf ------------31993244688011366989999158999978----91499999947999998166717999989---
Q 003510 713 ------------ERVIDATRAGSIAHLINHSCEPNCYSRVISVN----GDEHIIIFAKRDIKQWEELTYDYRFFSID--- 773 (814)
Q Consensus 713 ------------~~~iDa~~~Gn~aRfiNHSC~PN~~~~~~~~~----~~~~i~i~A~r~I~~GeELT~dY~~~~~~--- 773 (814)
.++|||+.+||+||||||||+|||.+..+..+ +..+|+|||+|+|++||||||||++..+.
T Consensus 197 ~~~~~d~~~~~~~~~IDa~~~GN~arfiNHSC~PN~~~~~~~~~~~~~~~~~i~~~A~rdI~~GeELt~dY~~~~~~~~~ 276 (302)
T 1ml9_A 197 DPDSLDPLLAGQPLEVDGEYMSGPTRFINHSCDPNMAIFARVGDHADKHIHDLALFAIKDIPKGTELTFDYVNGLTGLES 276 (302)
T ss_dssp CSSSSCHHHHSCCCEEECSSEECGGGGCEECSSCSEEEEEEESSGGGGGGCEEEEEESSCBCTTCEEEECTTC-------
T ss_pred CCCCCCCCCCCCCEEEECCCCCCHHHHCCCCCCCCEEEEEEEECCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCC
T ss_conf 75422100257747985761278878113589998469999700378882489999898769999899987897566643
Q ss_pred ---------CCEEEEECCCCCCCCCC
Q ss_conf ---------99465409999810157
Q 003510 774 ---------EQLACYCGFPRCRGVVN 790 (814)
Q Consensus 774 ---------~~~~C~Cg~~~Cr~~~~ 790 (814)
..++|+||+++|||+|.
T Consensus 277 ~~~~~~k~~~~~~C~CGs~~Crg~l~ 302 (302)
T 1ml9_A 277 DAHDPSKISEMTKCLCGTAKCRGYLW 302 (302)
T ss_dssp --------------------------
T ss_pred CCCCCCCCCCCCEEECCCCCCCCCCC
T ss_conf 22332336788670279876760249
No 6
>1mvh_A Cryptic LOCI regulator 4; lysine methyltransferase, CLR4, SET-domain; 2.30A {Schizosaccharomyces pombe} SCOP: b.85.7.1 PDB: 1mvx_A
Probab=1.00 E-value=1 Score=277.73 Aligned_cols=154 Identities=29% Similarity=0.451 Sum_probs=134.6
Q ss_pred CCHHHHHHHHHHCCCEEEEEEEECCCCEEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCC--
Q ss_conf 663446288755030339999840358038860017999969962591028768966677776202598404787188--
Q 003510 635 LSMADKYKHMKETFRKRLAFGKSGIHGFGIFAKHPHRAGDMVIEYTGELVRPSIADRREHFIYNSLVGAGTYMFRIDD-- 712 (814)
Q Consensus 635 ~~~~~~~~~l~~~~~~~~~v~~s~~~G~Gl~a~~~i~~g~~I~ey~Geii~~~~~~~r~~~~~~~~~~~~~y~~~~~~-- 712 (814)
++..|.|+.+|++.+.++.|.+++++||||||+++|++|+||+||+|++++..+++.|... |+. ....|+|.++.
T Consensus 122 C~~~C~Nr~~q~g~~~~l~v~~t~~~G~Gv~A~~~I~kG~~I~EY~Gevi~~~ea~~R~~~-y~~--~~~~Y~f~l~~~~ 198 (299)
T 1mvh_A 122 CSMECPNRVVQRGRTLPLEIFKTKEKGWGVRSLRFAPAGTFITCYLGEVITSAEAAKRDKN-YDD--DGITYLFDLDMFD 198 (299)
T ss_dssp SCTTCTTCTGGGCCCSCEEEEECSSSSEEEEESSCBCTTCEEEECCCEEEEHHHHHHHHTT-CCS--CSCCCEEEECSSC
T ss_pred CCCCCCCCCCCCCCCCCEEEEECCCCCCEEEECCEECCCCEEEEEEEEECCHHHHHHHHHH-HHC--CCCEEEEEECCCC
T ss_conf 9877587301302322679998289851585574157998999851298759999887776-521--5854799834777
Q ss_pred ---CEEEECCCCCCCCCCCCCCCCCCEEEEEEEEC----CEEEEEEEECCCCCCCCEEEEECCCCCC----C--------
Q ss_conf ---31993244688011366989999158999978----9149999994799999816671799998----9--------
Q 003510 713 ---ERVIDATRAGSIAHLINHSCEPNCYSRVISVN----GDEHIIIFAKRDIKQWEELTYDYRFFSI----D-------- 773 (814)
Q Consensus 713 ---~~~iDa~~~Gn~aRfiNHSC~PN~~~~~~~~~----~~~~i~i~A~r~I~~GeELT~dY~~~~~----~-------- 773 (814)
.++|||+.+||+||||||||+|||.+..++.+ +..+|+|||+|||++||||||||+...+ +
T Consensus 199 ~~~~~~IDa~~~GN~aRfiNHSC~PN~~~~~v~~~~~~~~~~~i~~~A~rdI~~GEELt~dY~~~~~~~~~~~~~~~~~~ 278 (299)
T 1mvh_A 199 DASEYTVDAQNYGDVSRFFNHSCSPNIAIYSAVRNHGFRTIYDLAFFAIKDIQPLEELTFDYAGAKDFSPVQSQKSQQNR 278 (299)
T ss_dssp SSSCEEEECSSEECGGGGCEECSSCSEEEEEEESCTTCTTSCEEEEEESSCBCTTCBCEECCCTTSSSSCCC--------
T ss_pred CCCCEEEECCCCCCHHHEEEECCCCCEEEEEEEEECCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCC
T ss_conf 77647994763688446476069987489999950588881179999965829999899976886034654333222111
Q ss_pred ---CCEEEEECCCCCCCCCCC
Q ss_conf ---994654099998101579
Q 003510 774 ---EQLACYCGFPRCRGVVND 791 (814)
Q Consensus 774 ---~~~~C~Cg~~~Cr~~~~~ 791 (814)
..++|+||+++|||+|.+
T Consensus 279 ~~k~~~~C~CGs~~Crg~l~g 299 (299)
T 1mvh_A 279 ISKLRRQCKCGSANCRGWLFG 299 (299)
T ss_dssp ---------------------
T ss_pred CCCCCCCCCCCCCCCCCCCCC
T ss_conf 266886758999878340679
No 7
>3bo5_A Histone-lysine N-methyltransferase setmar; SET domain, chromati regulator, DNA damage, DNA repair, DNA-binding, nucleus, ST genomics; HET: SAH; 1.59A {Homo sapiens}
Probab=1.00 E-value=1 Score=277.45 Aligned_cols=155 Identities=28% Similarity=0.474 Sum_probs=134.5
Q ss_pred CCHHHHHHHHHHCCCEEEEEEEECCCCEEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCC--
Q ss_conf 663446288755030339999840358038860017999969962591028768966677776202598404787188--
Q 003510 635 LSMADKYKHMKETFRKRLAFGKSGIHGFGIFAKHPHRAGDMVIEYTGELVRPSIADRREHFIYNSLVGAGTYMFRIDD-- 712 (814)
Q Consensus 635 ~~~~~~~~~l~~~~~~~~~v~~s~~~G~Gl~a~~~i~~g~~I~ey~Geii~~~~~~~r~~~~~~~~~~~~~y~~~~~~-- 712 (814)
++..|+|+.+|++.+.+|.|++++++||||||+++|++|+||+||+|++|+..+++.|... +. .....|+|.++.
T Consensus 111 C~~~C~Nr~~q~g~~~~l~V~~s~~~G~Gl~A~~~I~~G~~I~EY~Gevi~~~e~~~R~~~-~~--~~~~~Y~~~l~~~~ 187 (290)
T 3bo5_A 111 CSDHCRNRVVQKGLQFHFQVFKTHKKGWGLRTLEFIPKGRFVCEYAGEVLGFSEVQRRIHL-QT--KSDSNYIIAIREHV 187 (290)
T ss_dssp SCTTCTTCCGGGCCCSCEEEEECSSSSEEEEESSCBCTTCEEEECCEEEECHHHHHHHHTT-CC--SSCCCCCEEEEECC
T ss_pred CCCCCCCEECCCCCCCCEEEEECCCCCCEEEECCCCCCCCEEEEEEEEEECHHHHHHHHHH-HC--CCCCCCEEEECCCC
T ss_conf 7897798176468801679998289961575787339999999985389589999888776-30--25775036522455
Q ss_pred ------CEEEECCCCCCCCCCCCCCCCCCEEEEEEEECC-EEEEEEEECCCCCCCCEEEEECCCCCCC------------
Q ss_conf ------319932446880113669899991589999789-1499999947999998166717999989------------
Q 003510 713 ------ERVIDATRAGSIAHLINHSCEPNCYSRVISVNG-DEHIIIFAKRDIKQWEELTYDYRFFSID------------ 773 (814)
Q Consensus 713 ------~~~iDa~~~Gn~aRfiNHSC~PN~~~~~~~~~~-~~~i~i~A~r~I~~GeELT~dY~~~~~~------------ 773 (814)
+++|||+.+||+||||||||+|||.++.+.+++ ..+|+|||+|||++||||||||+..+.+
T Consensus 188 ~~~~~~~~~IDa~~~GN~arfiNHSC~PN~~~~~~~~~~~~~~i~~~A~rdI~~GEELt~dY~~~~~~~~~~~~~~~~~~ 267 (290)
T 3bo5_A 188 YNGQVMETFVDPTYIGNIGRFLNHSCEPNLLMIPVRIDSMVPKLALFAAKDIVPEEELSYDYSGRYLNLTVSASKERLDH 267 (290)
T ss_dssp -----EEEEEEEEEEECGGGGCEECSSCSEEEEEEESSSSSCEEEEEESSCBCTTCEEEECTTSCTTCCSSSEEEEEEEC
T ss_pred CCCCCCEEEEEEEECCCCHHEEEECCCCCEEEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCC
T ss_conf 57753236884100377021355158998899999967983289999863159999898887874135444321000135
Q ss_pred --CCEEEEECCCCCCCCCCCC
Q ss_conf --9946540999981015798
Q 003510 774 --EQLACYCGFPRCRGVVNDT 792 (814)
Q Consensus 774 --~~~~C~Cg~~~Cr~~~~~~ 792 (814)
..++|+||+++|||+|+..
T Consensus 268 ~~~~~~C~CGs~~CrG~l~~~ 288 (290)
T 3bo5_A 268 GKLRKPCYCGAKSCTAFLPFD 288 (290)
T ss_dssp SSCCCBCCCCCTTCCSBCCCE
T ss_pred CCCCCCCCCCCCCCCCCCCCC
T ss_conf 778756558986787638888
No 8
>2r3a_A Histone-lysine N-methyltransferase SUV39H2; histone H3-K9 methyltransferase 2, H3 lysine-9 specific 2, alternative splicing, cell cycle; HET: SAM; 2.00A {Homo sapiens}
Probab=1.00 E-value=1 Score=277.35 Aligned_cols=153 Identities=31% Similarity=0.561 Sum_probs=132.6
Q ss_pred CCHHHHHHHHHHCCCEEEEEEEEC-CCCEEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEECC--
Q ss_conf 663446288755030339999840-35803886001799996996259102876896667777620259840478718--
Q 003510 635 LSMADKYKHMKETFRKRLAFGKSG-IHGFGIFAKHPHRAGDMVIEYTGELVRPSIADRREHFIYNSLVGAGTYMFRID-- 711 (814)
Q Consensus 635 ~~~~~~~~~l~~~~~~~~~v~~s~-~~G~Gl~a~~~i~~g~~I~ey~Geii~~~~~~~r~~~~~~~~~~~~~y~~~~~-- 711 (814)
++..|.|+.+|++.+.++.|.++. ++||||||+++|++|+||+||+|++++..+++.|... |+.. ...|+|.++
T Consensus 125 C~~~C~Nr~~q~g~~~~l~vfrt~~~kG~Gl~A~~~I~~G~~I~EY~Gevi~~~ea~~R~~~-y~~~--~~~Y~f~l~~~ 201 (300)
T 2r3a_A 125 CGPDCPNRIVQKGTQYSLCIFRTSNGRGWGVKTLVKIKRMSFVMEYVGEVITSEEAERRGQF-YDNK--GITYLFDLDYE 201 (300)
T ss_dssp CCTTCTTCSGGGCCCSCEEEEECSSSCCEEEEESSCBCTTCEEEEECCEEEEHHHHHHHHHT-CCHH--HHHTEEECCSS
T ss_pred CCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCEEEEEEEEEECHHHHHHHHHH-HHHC--CCCEEEEEECC
T ss_conf 99868982303124225899983799567999685435999958985699359999888887-6513--45279986157
Q ss_pred -CCEEEECCCCCCCCCCCCCCCCCCEEEEEEEECC----EEEEEEEECCCCCCCCEEEEECCCCCCC-------------
Q ss_conf -8319932446880113669899991589999789----1499999947999998166717999989-------------
Q 003510 712 -DERVIDATRAGSIAHLINHSCEPNCYSRVISVNG----DEHIIIFAKRDIKQWEELTYDYRFFSID------------- 773 (814)
Q Consensus 712 -~~~~iDa~~~Gn~aRfiNHSC~PN~~~~~~~~~~----~~~i~i~A~r~I~~GeELT~dY~~~~~~------------- 773 (814)
..++|||+.+||++|||||||+|||.+..+.+++ ..+|+|||+|||++||||||||++....
T Consensus 202 ~~~~~IDa~~~GN~aRfiNHSC~PN~~~~~v~~~~~d~~~~~i~~~A~rdI~~GEELt~dY~~~~~~~~~~~~~d~~~~~ 281 (300)
T 2r3a_A 202 SDEFTVDAARYGNVSHFVNHSCDPNLQVFNVFIDNLDTRLPRIALFSTRTINAGEELTFDYQMKGSGDISSDSIDHSPAK 281 (300)
T ss_dssp CSSEEEECSSEECGGGGCEECSSCSEEEEEEESSCCCTTSCEEEEEESSCBCTTCEEEECGGGSSCC-------------
T ss_pred CCEEEEECCCCCCHHHHEECCCCCCEEEEEEEECCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCC
T ss_conf 76289954003676782554789987899999645778833899999518799998999778986564322212334434
Q ss_pred --CCEEEEECCCCCCCCCC
Q ss_conf --99465409999810157
Q 003510 774 --EQLACYCGFPRCRGVVN 790 (814)
Q Consensus 774 --~~~~C~Cg~~~Cr~~~~ 790 (814)
..++|+||+++|||+||
T Consensus 282 ~~~~~~C~CGs~~Crg~ln 300 (300)
T 2r3a_A 282 KRVRTVCKCGAVTCRGYLN 300 (300)
T ss_dssp -CCCCBCCCCCTTCCSBCC
T ss_pred CCCCCEEECCCCCCCCCCC
T ss_conf 5588772089962566185
No 9
>3hna_A Histone-lysine N-methyltransferase, H3 lysine-9 specific 5; EHMT1, structural genomics, SGC, structural genomics consortium, alternative splicing, ANK repeat; HET: MLZ SAH; 1.50A {Homo sapiens} PDB: 2rfi_A* 2igq_A* 3mo0_A* 3mo2_A* 3mo5_A* 3sw9_A* 3swc_A* 4h4h_A* 4i51_A* 3fpd_A* 3k5k_A* 3nni_A* 3rjw_A* 2o8j_A*
Probab=1.00 E-value=1 Score=272.84 Aligned_cols=144 Identities=31% Similarity=0.543 Sum_probs=127.6
Q ss_pred CHHHHHHHHHHCCCEEEEEEEECCCCEEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCC--
Q ss_conf 634462887550303399998403580388600179999699625910287689666777762025984047871883--
Q 003510 636 SMADKYKHMKETFRKRLAFGKSGIHGFGIFAKHPHRAGDMVIEYTGELVRPSIADRREHFIYNSLVGAGTYMFRIDDE-- 713 (814)
Q Consensus 636 ~~~~~~~~l~~~~~~~~~v~~s~~~G~Gl~a~~~i~~g~~I~ey~Geii~~~~~~~r~~~~~~~~~~~~~y~~~~~~~-- 713 (814)
+..|.|+.+|++.+.++.|++++++||||||+++|++|++|+||+|++++..+++.|+. ..|+|.++..
T Consensus 133 ~~~C~Nr~~q~g~~~~l~v~~t~~kG~Gv~A~~~I~~G~~I~eY~Gevi~~~e~~~r~~---------~~Y~f~l~~~~~ 203 (287)
T 3hna_A 133 WRNCRNRVVQNGLRARLQLYRTRDMGWGVRSLQDIPPGTFVCEYVGELISDSEADVREE---------DSYLFDLDNKDG 203 (287)
T ss_dssp CTTCSSCSGGGCCCSCEEEEECSSSSEEEEESSCBCTTCEEEEECEEEEEHHHHHTCSC---------CTTEEESCCSSS
T ss_pred CCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCEEEEEEEEECCHHHHHHHCC---------CCEEEEECCCCC
T ss_conf 89898811076884247999769982379757620799799996318816999865315---------606888316888
Q ss_pred --EEEECCCCCCCCCCCCCCCCCCEEEEEEEECCE----EEEEEEECCCCCCCCEEEEECCCCCC---CCCEEEEECCCC
Q ss_conf --199324468801136698999915899997891----49999994799999816671799998---999465409999
Q 003510 714 --RVIDATRAGSIAHLINHSCEPNCYSRVISVNGD----EHIIIFAKRDIKQWEELTYDYRFFSI---DEQLACYCGFPR 784 (814)
Q Consensus 714 --~~iDa~~~Gn~aRfiNHSC~PN~~~~~~~~~~~----~~i~i~A~r~I~~GeELT~dY~~~~~---~~~~~C~Cg~~~ 784 (814)
++|||+.+||+||||||||+|||.+..+++.+. .+|+|||+|||++||||||||+...+ ...+.|+||+++
T Consensus 204 ~~~~IDa~~~GN~aRFiNHSC~PN~~~~~v~~~~~d~~~~~i~~~A~RdI~~GEELT~dYg~~~~~~~~~~~~C~CGs~~ 283 (287)
T 3hna_A 204 EVYCIDARFYGNVSRFINHHCEPNLVPVRVFMAHQDLRFPRIAFFSTRLIEAGEQLGFDYGERFWDIKGKLFSCRCGSPK 283 (287)
T ss_dssp SCEEEEEEEEECGGGGCEECSSCSEEEEEEESSCCCTTCCEEEEEESSCBCTTCBCEECCCHHHHHHHTTTCCCCCCCTT
T ss_pred CEEEEECCCCCCCHHEEEECCCCCCEEEEEEEECCCCCCEEEEEEECCEECCCCEEEEECCCCCCCCCCCCCEEECCCCC
T ss_conf 45998454368803415514798833589998437788235999985511899969971798614557884774597977
Q ss_pred CCCC
Q ss_conf 8101
Q 003510 785 CRGV 788 (814)
Q Consensus 785 Cr~~ 788 (814)
|||+
T Consensus 284 CRgs 287 (287)
T 3hna_A 284 CRHS 287 (287)
T ss_dssp CSCC
T ss_pred CCCC
T ss_conf 8897
No 10
>2wzo_A Transforming growth factor beta regulator 1; nucleus, cell cycle, tumor suppressor; 1.60A {Homo sapiens}
Probab=1.00 E-value=1 Score=257.83 Aligned_cols=142 Identities=25% Similarity=0.463 Sum_probs=129.0
Q ss_pred CCCCCCEEECCEEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCEEEEECCCCC
Q ss_conf 77654435456569742122139998888984338993999983678799974239999984699985225999819998
Q 003510 176 SIGISPYVFGDLQILSLGKIVKDSEYFQDDRFIWPEGYTAVRKFTSLADPRVCNSYKMEVLRDTESKIRPLFRVTLDNGE 255 (814)
Q Consensus 176 ~~~~~P~~~~~l~i~slG~iv~~~~~fh~~~~i~P~Gy~s~R~~~s~~dp~~~~~y~~~I~~~~~~~~~P~F~V~~~d~~ 255 (814)
|..++|+++|+++|++||+|++++++||+++||||+||+++|+|+|+.||+++|+|+|+|+|+++. |+|+|+++|++
T Consensus 1 g~p~lP~~~g~l~v~slG~i~~~~~~fh~~~~IyPvGy~~~R~y~s~~dp~~~~~Y~c~I~d~~~~---P~F~V~~e~~~ 77 (146)
T 2wzo_A 1 GRPVFPIGLGGLTVYSLGEIITDRPGFHDESAIYPVGYCSTRIYASMKCPDQKCLYTCQIKDGGVQ---PQFEIVPEDDP 77 (146)
T ss_dssp CCCCCCEEETTEEEEEEEECCCSSGGGBCSSCBCCEEEEEEEEEECSSCTTSEEEEEEEEEECSSS---EEEEEEETTCG
T ss_pred CCCEECEEECCEEEEEEEEECCCCCCCCCCCCEECCCEEEEEEEECCCCCCCEEEEEEEEEECCCC---CEEEEEECCCC
T ss_conf 985526898899999853481699883289705189999999970440899759999999978974---20378766899
Q ss_pred C--EECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHC
Q ss_conf 2--2248935899999999996203999964212211002655743247883899999960377899980112100
Q 003510 256 Q--FTGSTPSTCWSKICMKIREGQNNTSDDFSAEGAAEKISESGSDMFGFSNPEVMKLILGLTKSRPTSKSSLCKL 329 (814)
Q Consensus 256 ~--~~~~s~~~~W~~i~~~i~~~~~~~~~~~~~~~~~~~~~~sG~~~FGls~p~v~~li~~Lp~~~~~~k~~~~k~ 329 (814)
. +.|.||++||+++++++++.+... ....++||++||||++|.|.++||+||+++.|.+|.+++.
T Consensus 78 ~~~~~g~Sp~~~W~~il~~i~~~~~~~---------~~~~~~sG~~~FGl~~p~V~~lie~Lpg~~~C~~Y~~~~f 144 (146)
T 2wzo_A 78 QNAIVSSSADACHAELLRTISTTMGKL---------MPNLLPAGADFFGFSHPAIHNLIQSCPGARKCINYQWVKF 144 (146)
T ss_dssp GGCEEESSHHHHHHHHHHHHHHHHTCC---------CTTCCCCHHHHHTTTSHHHHHHHTTSTTGGGCTTCCCCCC
T ss_pred CCEEEECCHHHHHHHHHHHHHHHHCCC---------CCCCCCCHHHEECCCCHHHHHHHHHCCCCHHCCCCCCEEE
T ss_conf 753894885999999999999986474---------8887778525566798899999982999003216785785
Done!