Query 003511
Match_columns 814
No_of_seqs 340 out of 2121
Neff 5.6
Searched_HMMs 29240
Date Tue Mar 26 18:31:47 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/003511.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1558-1562//hhsearch_pdb/003511hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bfn_A Kinesin-like protein KI 1.0 1 1 701.8 28.1 335 9-358 17-357 (388)
2 3cob_A Kinesin heavy chain-lik 1.0 1 1 699.7 28.5 345 11-383 3-353 (369)
3 2y65_A Kinesin, kinesin heavy 1.0 1 1 698.8 28.2 345 10-381 8-360 (365)
4 2owm_A Nckin3-434, related to 1.0 1 1 697.5 32.0 345 10-356 35-421 (443)
5 2vvg_A Kinesin-2; motor protei 1.0 1 1 696.8 30.2 342 12-361 3-348 (350)
6 3b6u_A Kinesin-like protein KI 1.0 1 1 694.5 28.3 341 8-360 16-365 (372)
7 1goj_A Kinesin, kinesin heavy 1.0 1 1 692.0 30.7 334 10-361 3-343 (355)
8 3lre_A Kinesin-like protein KI 1.0 1 1 690.7 29.1 336 10-348 7-355 (355)
9 2zfi_A Kinesin-like protein KI 1.0 1 1 687.6 27.7 336 12-356 3-362 (366)
10 1t5c_A CENP-E protein, centrom 1.0 1 1 683.2 30.4 330 11-360 2-340 (349)
No 1
>3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens}
Probab=1.00 E-value=1 Score=701.84 Aligned_cols=335 Identities=32% Similarity=0.528 Sum_probs=303.7
Q ss_pred CCCCCCEEEEEEECCCCCCCCCC---CEEEEECCCEEEEECCCCCCHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHH
Q ss_conf 99998439999918999875899---708993895799979999810111001368750134310039998709889999
Q 003511 9 TKKSTTLTVAIKCRPLTEREQGR---DIVRVKHDKEVVVLDPDFSKDYLDHIQNRTKEKNYCFDRAFGPGCTNLDVYTAC 85 (814)
Q Consensus 9 ~~~~~~IkV~VRvRPl~~~E~~~---~~V~v~~~~~Vvv~dp~~~~~~l~~~~~~~~~k~F~FD~VF~~~asQeeVy~~~ 85 (814)
....++|+|+|||||++++|... .||...++.++.+.++. +....+.|.||+||+++++|++||+.+
T Consensus 17 ~~~~~~irV~vRvRP~~~~E~~~~~~~~v~~~~~~~~~i~~~~----------~~~~~~~f~FD~Vf~~~~tQ~~Vy~~~ 86 (388)
T 3bfn_A 17 QGPPARVRVAVRLRPFVDGTAGASDPPCVRGMDSCSLEIANWR----------NHQETLKYQFDAFYGERSTQQDIYAGS 86 (388)
T ss_dssp SSCCCCCEEEEEECCCC---------------------------------------CEEEEECSEEECTTCCHHHHHHHH
T ss_pred CCCCCCEEEEEECCCCCHHHHCCCCCCEEEECCCCEEEEECCC----------CCCCEEEEECCEEECCCCCHHHHHHHH
T ss_conf 6899997999977989914534699863995599859995688----------887705987236956789775778998
Q ss_pred HHHHHHHHCCCCCEEEEEECCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHCC---CCCEEEEEEEEEEEECCEEEEC
Q ss_conf 7666865216864479941468999331522479999733403899998874158---9981999999999956454423
Q 003511 86 ISSVISGVVQGLNATVFAYGSTGSGKTYTMVGTKSDPGLMVLSLHTIFDLIKKDK---NSDEFEVSCSYLEVYNEVIYDL 162 (814)
Q Consensus 86 v~plV~~vl~G~N~tIfAYGqTGSGKTyTM~G~~~~~GIipral~~LF~~i~~~~---~~~~f~VsvSylEIYnE~I~DL 162 (814)
+.|+|+++++|||+||||||||||||||||+|+.+++|||||++++||..+.... ....|.|++||+|||||+|+||
T Consensus 87 ~~plv~~~l~G~N~tifAYGqTGSGKTyTM~G~~~~~Giipra~~~lF~~i~~~~~~~~~~~~~V~vS~lEIYnE~i~DL 166 (388)
T 3bfn_A 87 VQPILRHLLEGQNASVLAYGPTGAGKTHTMLGSPEQPGVIPRALMDLLQLTREEGAEGRPWALSVTMSYLEIYQEKVLDL 166 (388)
T ss_dssp TGGGHHHHTTTCCEEEEEESCTTSSHHHHHTBCSSSBCHHHHHHHHHHHHHHHHTSTTCSEEEEEEEEEEEEETTEEEES
T ss_pred HHHHHHHHHCCCEEEEEEECCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCEEEEH
T ss_conf 88888876169656676116888999768656755664168999999999987423377714899999999988864560
Q ss_pred CCCCCCCCEEEECCCCCEEECCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCEE
Q ss_conf 45665852044659998364480899934967999999955203787555577998987489999999983355677124
Q 003511 163 LEKSSAHLELREDPMHGIVVAGLRCIKVHSADKILELLNLGNSRRKTENTEANGTSSRSHAVLEITVKRRQKTEYCNQVM 242 (814)
Q Consensus 163 L~~~~~~l~ired~~~g~~V~gLtev~V~S~eei~~lL~~G~~~R~~~~T~~N~~SSRSHaIftI~V~~~~~~~~~~~~~ 242 (814)
|++....+.+++|+.++++|.|++++.|.+++|++.+|..|.++|++++|.+|..|||||+||+|+|.+..... .....
T Consensus 167 L~~~~~~l~ired~~~~v~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~If~i~v~~~~~~~-~~~~~ 245 (388)
T 3bfn_A 167 LDPASGDLVIREDCRGNILIPGLSQKPISSFADFERHFLPASRNRTVGATRLNQRSSRSHAVLLVKVDQRERLA-PFRQR 245 (388)
T ss_dssp SSCSSCBCCCEECTTSCEECTTCCCEECCSHHHHHHHHHHHTC-----------CGGGSEEEEEEEEEEEESST-TCCEE
T ss_pred HCCCCCCCEEEECCCCCEEECCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEECCCC-CCCEE
T ss_conf 01678884599869999885360599958999999999997502652236477877777399999999822688-87336
Q ss_pred EEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEE
Q ss_conf 88899997689854222367643448887733749999999998258999998534554630112100358888621379
Q 003511 243 RGKLSLVDLAGSERASEANSGGQKLRDGANINRSLLALANCINALGKPQKKGLAYVPYRNSKLTRILKDGLSGNSQTVMV 322 (814)
Q Consensus 243 ~skL~lVDLAGSER~~~t~~~g~rlkE~~~IN~SL~aLg~VI~aLs~~~~~~~~hIPYRdSKLTrLLkDsLGGnskT~mI 322 (814)
.|+|+|||||||||..++++.|.+++|+.+||+||++||+||.||+++. .||||||||||+||||+|||||+|+||
T Consensus 246 ~skL~lVDLAGSEr~~~t~~~g~rlkE~~~INkSL~aLg~vI~aL~~~~----~hVPYRdSkLTrlLqdsLgGnskT~mI 321 (388)
T 3bfn_A 246 EGKLYLIDLAGSEDNRRTGNKGLRLKESGAINTSLFVLGKVVDALNQGL----PRVPYRDSKLTRLLQDSLGGSAHSILI 321 (388)
T ss_dssp EEEEEEEECCCTTC--------------CCCCHHHHHHHHHHHHHHTTC----SCCCGGGSHHHHHTTTSSSTTCEEEEE
T ss_pred EEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC----CCCCCCCCHHHHHHHHHHCCCCCEEEE
T ss_conf 8899999898776655456755114777675063999999999996699----988675658899999860899628999
Q ss_pred EEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 730999877687899999999973100121234556
Q 003511 323 ATISPVDSQYHHTLNTLKYADRAKKIKTHIQKNIGS 358 (814)
Q Consensus 323 atISPs~~~~eETlsTLrfA~Rak~Ikn~~~~N~~~ 358 (814)
|||||+..+++||++||+||+|||+|+|+|.+|...
T Consensus 322 a~iSP~~~~~~ETlsTLrfA~rak~I~n~p~~n~~~ 357 (388)
T 3bfn_A 322 ANIAPERRFYLDTVSALNFAARSKEVINRPFTNESL 357 (388)
T ss_dssp EEECCSGGGHHHHHHHHHHHCSEEEEC---------
T ss_pred EEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 997985000899999999999985175767356789
No 2
>3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A*
Probab=1.00 E-value=1 Score=699.68 Aligned_cols=345 Identities=33% Similarity=0.550 Sum_probs=304.0
Q ss_pred CCCCEEEEEEECCCCCCCCC-CCEEEEE--CCCEEEEECCCCCCHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHHH
Q ss_conf 99843999991899987589-9708993--89579997999981011100136875013431003999870988999976
Q 003511 11 KSTTLTVAIKCRPLTEREQG-RDIVRVK--HDKEVVVLDPDFSKDYLDHIQNRTKEKNYCFDRAFGPGCTNLDVYTACIS 87 (814)
Q Consensus 11 ~~~~IkV~VRvRPl~~~E~~-~~~V~v~--~~~~Vvv~dp~~~~~~l~~~~~~~~~k~F~FD~VF~~~asQeeVy~~~v~ 87 (814)
..++|+|+|||||+++.|.. ..++.+. +...+..... ....+.|.||+||+++++|++||+. +.
T Consensus 3 ~~~~i~V~vRvRP~~~~E~~~~~~~~~~~~~~~~v~~~~~------------~~~~~~f~FD~Vf~~~~~Q~~Vy~~-~~ 69 (369)
T 3cob_A 3 MKGKIRVYCRLRPLCEKEIIAKERNAIRSVDEFTVEHLWK------------DDKAKQHMYDRVFDGNATQDDVFED-TK 69 (369)
T ss_dssp -CCBCEEEEEECCCCHHHHHTTCCBCEEECSSSEEEEECT------------TSCEEEEECSEEECTTCCHHHHHHT-TT
T ss_pred CCCCEEEEEECCCCCHHHCCCCCCEEEECCCCEEEEECCC------------CCCCEEEECCEEECCCCCCCEEHHH-HH
T ss_conf 8998499998799983454679837997699679993378------------9982688659898999973140221-31
Q ss_pred HHHHHHCCCCCEEEEEECCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCEEEECCCCC-
Q ss_conf 6686521686447994146899933152247999973340389999887415899819999999999564544234566-
Q 003511 88 SVISGVVQGLNATVFAYGSTGSGKTYTMVGTKSDPGLMVLSLHTIFDLIKKDKNSDEFEVSCSYLEVYNEVIYDLLEKS- 166 (814)
Q Consensus 88 plV~~vl~G~N~tIfAYGqTGSGKTyTM~G~~~~~GIipral~~LF~~i~~~~~~~~f~VsvSylEIYnE~I~DLL~~~- 166 (814)
|+|+++++|||+||||||||||||||||+|++.++|||||++++||..+........|.|++||+|||||+|+|||++.
T Consensus 70 ~lv~~~l~G~n~tifAYGqTGSGKTyTM~G~~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~ 149 (369)
T 3cob_A 70 YLVQSAVDGYNVCIFAYGQTGSGKTFTIYGADSNPGLTPRAMSELFRIMKKDSNKFSFSLKAYMVELYQDTLVDLLLPKQ 149 (369)
T ss_dssp HHHHHHHTTCEEEEEEEECTTSSHHHHHTBCSSSBCHHHHHHHHHHHHHHHTTTTEEEEEEEEEEEECSSCEEESSCCSS
T ss_pred HHHHHHHCCCCEEEEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCEEEECCCCCC
T ss_conf 32576646971599987899998837511799888625899999999987413575267789998770763234578755
Q ss_pred --CCCCEEEECCCCCEEECCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCEEEE
Q ss_conf --585204465999836448089993496799999995520378755557799898748999999998335567712488
Q 003511 167 --SAHLELREDPMHGIVVAGLRCIKVHSADKILELLNLGNSRRKTENTEANGTSSRSHAVLEITVKRRQKTEYCNQVMRG 244 (814)
Q Consensus 167 --~~~l~ired~~~g~~V~gLtev~V~S~eei~~lL~~G~~~R~~~~T~~N~~SSRSHaIftI~V~~~~~~~~~~~~~~s 244 (814)
...+.+++++.++++|.|++++.|.++++++.+|..|.++|++++|.+|..|||||+||+|+|.+..... +....|
T Consensus 150 ~~~~~l~i~e~~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~--~~~~~s 227 (369)
T 3cob_A 150 AKRLKLDIKKDSKGMVSVENVTVVSISTYEELKTIIQRGSEQRHTTGTLMNEQSSRSHLIVSVIIESTNLQT--QAIARG 227 (369)
T ss_dssp SCCCCCEEEECTTSCEEEETCCCEEECSHHHHHHHHHHHHHHTCCCSCCTTCHHHHSEEEEEEEEEEEETTT--CCEEEE
T ss_pred CCCCCEEEEECCCCCEECCCCEEEEECCHHHHHHHHHHHHHCCEEECCCCCCCCCCCEEEEEEEEEEECCCC--CCEEEE
T ss_conf 677642789979998880598799808999999999987525523034477877763389999999852787--727888
Q ss_pred EEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEEEE
Q ss_conf 89999768985422236764344888773374999999999825899999853455463011210035888862137973
Q 003511 245 KLSLVDLAGSERASEANSGGQKLRDGANINRSLLALANCINALGKPQKKGLAYVPYRNSKLTRILKDGLSGNSQTVMVAT 324 (814)
Q Consensus 245 kL~lVDLAGSER~~~t~~~g~rlkE~~~IN~SL~aLg~VI~aLs~~~~~~~~hIPYRdSKLTrLLkDsLGGnskT~mIat 324 (814)
+|+|||||||||..++++.|.+++|+.+||+||++||+||.+|++++ .||||||||||+||||+|||||+|+||||
T Consensus 228 kL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~----~hvPyRdSkLT~lLqdsLgGnskt~mIa~ 303 (369)
T 3cob_A 228 KLSFVDLAGSERVKKSGSAGNQLKEAQSINKSLSALGDVISALSSGN----QHIPYRNHKLTMLMSDSLGGNAKTLMFVN 303 (369)
T ss_dssp EEEEEECCCSSCCCCCSSCSHHHHHHHHHTHHHHHHHHHHHHHHTTC----SCCCGGGCHHHHHTTTTTTSSSEEEEEEE
T ss_pred EEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC----CCCCCCCCHHHHHHHHHCCCCCCEEEEEE
T ss_conf 99999688787544347630234778787788999999999986489----96787477778878876289852799999
Q ss_pred ECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 09998776878999999999731001212345565621127999999999999999999
Q 003511 325 ISPVDSQYHHTLNTLKYADRAKKIKTHIQKNIGSIDTHVSDYQRMIDNLQIEVCRLKKE 383 (814)
Q Consensus 325 ISPs~~~~eETlsTLrfA~Rak~Ikn~~~~N~~~~~~~~~~~~~~I~~L~~Ei~~Lk~e 383 (814)
|||+..+++||++||+||+|||+|+|.|.+|... ..|..|+.++..|+.+
T Consensus 304 isP~~~~~~ETl~TLrfA~rak~i~~~~~~n~~~---------~ei~~L~~~l~~~~~~ 353 (369)
T 3cob_A 304 ISPAESNLDETHNSLTYASRVRSIVNDPSKNVSS---------KEVARLKKLVSYWKEQ 353 (369)
T ss_dssp ECCBGGGHHHHHHHHHHHHHHHTCBCCCCCCEEC---------HHHHHHHHHTTCC---
T ss_pred ECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCH---------HHHHHHHHHHHHHHHH
T ss_conf 4772002899999999999986545677415788---------9999999999999976
No 3
>2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A*
Probab=1.00 E-value=1 Score=698.84 Aligned_cols=345 Identities=35% Similarity=0.524 Sum_probs=305.3
Q ss_pred CCCCCEEEEEEECCCCCCCC--CC-CEEEEECC--CEEEEECCCCCCHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHH
Q ss_conf 99984399999189998758--99-70899389--579997999981011100136875013431003999870988999
Q 003511 10 KKSTTLTVAIKCRPLTEREQ--GR-DIVRVKHD--KEVVVLDPDFSKDYLDHIQNRTKEKNYCFDRAFGPGCTNLDVYTA 84 (814)
Q Consensus 10 ~~~~~IkV~VRvRPl~~~E~--~~-~~V~v~~~--~~Vvv~dp~~~~~~l~~~~~~~~~k~F~FD~VF~~~asQeeVy~~ 84 (814)
...++|+|+|||||++++|. +. .++.+.++ ...+.. ..+.|.||+||+++++|++||+.
T Consensus 8 ~~~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~i~~----------------~~~~f~FD~Vf~~~~~Q~~Vy~~ 71 (365)
T 2y65_A 8 PAEDSIKVVCRFRPLNDSEEKAGSKFVVKFPNNVEENCISI----------------AGKVYLFDKVFKPNASQEKVYNE 71 (365)
T ss_dssp CCEEECEEEEEECCCCHHHHHTTCCBCEECCSSSTTCEEEE----------------TTEEEECSEEECTTCCHHHHHHH
T ss_pred CCCCCEEEEEECCCCCHHHHCCCCCEEEEECCCCCCCEEEE----------------CCEEEECCEEECCCCCHHHHHHH
T ss_conf 89999599999496994673159925999479987767998----------------99898674696478998999998
Q ss_pred HHHHHHHHHCCCCCEEEEEECCCCCCCCEEECCCCC---CCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCEEEE
Q ss_conf 976668652168644799414689993315224799---99733403899998874158998199999999995645442
Q 003511 85 CISSVISGVVQGLNATVFAYGSTGSGKTYTMVGTKS---DPGLMVLSLHTIFDLIKKDKNSDEFEVSCSYLEVYNEVIYD 161 (814)
Q Consensus 85 ~v~plV~~vl~G~N~tIfAYGqTGSGKTyTM~G~~~---~~GIipral~~LF~~i~~~~~~~~f~VsvSylEIYnE~I~D 161 (814)
++.|+|+++++|||+||||||||||||||||+|... ++|||||++++||..+........|.|++||+|||||+|+|
T Consensus 72 ~~~plv~~~l~G~n~tifAYGqTGSGKTyTm~G~~~~~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~D 151 (365)
T 2y65_A 72 AAKSIVTDVLAGYNGTIFAYGQTSSGKTHTMEGVIGDSVKQGIIPRIVNDIFNHIYAMEVNLEFHIKVSYYEIYMDKIRD 151 (365)
T ss_dssp HTHHHHHHHHTTCCEEEEEECSTTSSHHHHHTBSTTCTTTBCHHHHHHHHHHHHHHHCCSCEEEEEEEEEEEEETTEEEE
T ss_pred HHHHHHHHHHCCCCEEEEEECCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCEEEE
T ss_conf 63037799867982489834589999964886688875557737799999999998336895399999999998772126
Q ss_pred CCCCCCCCCEEEECCCCCEEECCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCE
Q ss_conf 34566585204465999836448089993496799999995520378755557799898748999999998335567712
Q 003511 162 LLEKSSAHLELREDPMHGIVVAGLRCIKVHSADKILELLNLGNSRRKTENTEANGTSSRSHAVLEITVKRRQKTEYCNQV 241 (814)
Q Consensus 162 LL~~~~~~l~ired~~~g~~V~gLtev~V~S~eei~~lL~~G~~~R~~~~T~~N~~SSRSHaIftI~V~~~~~~~~~~~~ 241 (814)
||++....+.+++++.++++|.|++++.|.+++|++.+|..|.++|++++|.+|..|||||+||+|+|.+..... ...
T Consensus 152 LL~~~~~~l~i~e~~~~~~~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~--~~~ 229 (365)
T 2y65_A 152 LLDVSKVNLSVHEDKNRVPYVKGATERFVSSPEDVFEVIEEGKSNRHIAVTNMNEHSSRSHSVFLINVKQENLEN--QKK 229 (365)
T ss_dssp TTCTTCCSBCEEECSSSCEEETTCCCEEECSHHHHHHHHHHHHHHHTTTCSCHHHHHHTSEEEEEEEEEEEETTT--CCE
T ss_pred CCCCCCCCCEEEECCCCCEEECCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEECCC--CCE
T ss_conf 225876772378879998784278899658799999999999864665235688878876399999999970588--878
Q ss_pred EEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEE
Q ss_conf 48889999768985422236764344888773374999999999825899999853455463011210035888862137
Q 003511 242 MRGKLSLVDLAGSERASEANSGGQKLRDGANINRSLLALANCINALGKPQKKGLAYVPYRNSKLTRILKDGLSGNSQTVM 321 (814)
Q Consensus 242 ~~skL~lVDLAGSER~~~t~~~g~rlkE~~~IN~SL~aLg~VI~aLs~~~~~~~~hIPYRdSKLTrLLkDsLGGnskT~m 321 (814)
..|+|+|||||||||..++++.|.+++|+.+||+||++||+||.+|+++++ .||||||||||+||||+||||++|+|
T Consensus 230 ~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~---~hvPyRdSkLT~lLqdsLgGnskt~m 306 (365)
T 2y65_A 230 LSGKLYLVDLAGSEKVSKTGAEGTVLDEAKNINKSLSALGNVISALADGNK---THIPYRDSKLTRILQESLGGNARTTI 306 (365)
T ss_dssp EEEEEEEEECCCCCC----------------CCHHHHHHHHHHHHHHHCCC---SCCCGGGCHHHHHTGGGTTSSSEEEE
T ss_pred EEEEEEEEECCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC---CCCCCCCCHHHHHHHHHCCCCCCEEE
T ss_conf 689999997999882012189522478998888889999989999852788---87866357888987761389963799
Q ss_pred EEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 973099987768789999999997310012123455656211279999999999999999
Q 003511 322 VATISPVDSQYHHTLNTLKYADRAKKIKTHIQKNIGSIDTHVSDYQRMIDNLQIEVCRLK 381 (814)
Q Consensus 322 IatISPs~~~~eETlsTLrfA~Rak~Ikn~~~~N~~~~~~~~~~~~~~I~~L~~Ei~~Lk 381 (814)
|+||||+..+++||++||+||+|||+|+|.|.+|..... ..+++.++.|+++|+
T Consensus 307 I~~isP~~~~~~ETl~TL~fA~rak~I~n~~~~n~~~~~------~~~~~~~~~e~~~~~ 360 (365)
T 2y65_A 307 VICCSPASFNESETKSTLDFGRRAKTVKNVVCVNEELTA------EEWKRRYEKEKEKNA 360 (365)
T ss_dssp EEEECCBGGGHHHHHHHHHHHHHHTTCEEECCCEEECCS------HHHHHC---------
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEECCCCCH------HHHHHHHHHHHHHHH
T ss_conf 998467527889999999999997215675411788999------999999999999999
No 4
>2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa}
Probab=1.00 E-value=1 Score=697.54 Aligned_cols=345 Identities=37% Similarity=0.574 Sum_probs=298.6
Q ss_pred CCCCCEEEEEEECCCCCCCC--CCCE-EEEECC-CEEEEECCCCCCHH-HHHC--CCCCCCCEEEEEEECCC-------C
Q ss_conf 99984399999189998758--9970-899389-57999799998101-1100--13687501343100399-------9
Q 003511 10 KKSTTLTVAIKCRPLTEREQ--GRDI-VRVKHD-KEVVVLDPDFSKDY-LDHI--QNRTKEKNYCFDRAFGP-------G 75 (814)
Q Consensus 10 ~~~~~IkV~VRvRPl~~~E~--~~~~-V~v~~~-~~Vvv~dp~~~~~~-l~~~--~~~~~~k~F~FD~VF~~-------~ 75 (814)
...++|+|+|||||++++|. +..+ +.+... ..+.+..|...... ..+. ......+.|.||+||++ .
T Consensus 35 ~~~~~vrV~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~F~FD~vF~~~~~~~~~~ 114 (443)
T 2owm_A 35 DPGANVRVVVRVRAFLPRELERNAECIVEMDPATERTSLLVPQETDFADARGARSRRVLEEKSFTFDKSFWSHNTEDEHY 114 (443)
T ss_dssp CCCEECEEEEEEECCCHHHHHTTCCCCEEECSSSCEEEECCCC---------------CCCEEEECSEEEEESCTTSTTC
T ss_pred CCCCCEEEEEEECCCCHHHHHCCCCEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEECCEEECCCCCCCCCC
T ss_conf 89989499999399996886269945999758986279955887654333332123366772685273827877677657
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHCC---CCCEEEEEEEEE
Q ss_conf 87098899997666865216864479941468999331522479999733403899998874158---998199999999
Q 003511 76 CTNLDVYTACISSVISGVVQGLNATVFAYGSTGSGKTYTMVGTKSDPGLMVLSLHTIFDLIKKDK---NSDEFEVSCSYL 152 (814)
Q Consensus 76 asQeeVy~~~v~plV~~vl~G~N~tIfAYGqTGSGKTyTM~G~~~~~GIipral~~LF~~i~~~~---~~~~f~VsvSyl 152 (814)
++|++||+.++.|+|+++++|||+||||||||||||||||+|+++++|||||++++||..+.... ....|.|+|||+
T Consensus 115 asQ~~Vy~~~~~plv~~~l~GyN~tIfAYGQTGSGKTyTM~G~~~~~GIipr~~~~lF~~i~~~~~~~~~~~~~V~vS~l 194 (443)
T 2owm_A 115 ATQEHVYDSLGEEFLDHNFEGYHTCIFAYGQTGSGKSYTMMGTPDQPGLIPRTCEDLFQRIASAQDETPNISYNVKVSYF 194 (443)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTCCEEEEEESSTTSSHHHHHTCCTTSCCHHHHHHHHHHHHHHHTTTTSTTCEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEE
T ss_conf 87999987632468888636874279986788999988864687777537999999999887652136773499999999
Q ss_pred EEECCEEEECCCCC-----CCCCEEEECCCCCEEECCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEE
Q ss_conf 99564544234566-----5852044659998364480899934967999999955203787555577998987489999
Q 003511 153 EVYNEVIYDLLEKS-----SAHLELREDPMHGIVVAGLRCIKVHSADKILELLNLGNSRRKTENTEANGTSSRSHAVLEI 227 (814)
Q Consensus 153 EIYnE~I~DLL~~~-----~~~l~ired~~~g~~V~gLtev~V~S~eei~~lL~~G~~~R~~~~T~~N~~SSRSHaIftI 227 (814)
|||||+|+|||++. ...+.|+|++.+|++|.|++++.|.+++|++.+|..|.++|++++|.||..|||||+||+|
T Consensus 195 EIYnE~i~DLL~~~~~~~~~~~l~ire~~~~g~~V~gl~e~~V~s~~e~~~ll~~G~~~R~~~~T~~N~~SSRSH~Ifti 274 (443)
T 2owm_A 195 EVYNEHVRDLLAPVVPNKPPYYLKVRESPTEGPYVKDLTEVPVRGLEEIIRWMRIGDGSRTVASTKMNDTSSRSHAVFTI 274 (443)
T ss_dssp EEETTEEEETTSCCCSSCCCCCCEEEEETTTEEEEETCCCEECCSHHHHHHHHHHHHTTSCBCSSSSSCBCTTEEEEEEE
T ss_pred EEECCEEEECCCCCCCCCCCCCCCEEECCCCCEECCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEE
T ss_conf 99889756856763457865344303779999952687799828999999999999733786337587766777199999
Q ss_pred EEEEEECCC--CCCCEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC------------
Q ss_conf 999983355--677124888999976898542223676434488877337499999999982589999------------
Q 003511 228 TVKRRQKTE--YCNQVMRGKLSLVDLAGSERASEANSGGQKLRDGANINRSLLALANCINALGKPQKK------------ 293 (814)
Q Consensus 228 ~V~~~~~~~--~~~~~~~skL~lVDLAGSER~~~t~~~g~rlkE~~~IN~SL~aLg~VI~aLs~~~~~------------ 293 (814)
+|.+..... .......|+|+|||||||||+.++++.|+|++|+.+||+||++||+||.||++....
T Consensus 275 ~v~~~~~~~~~~~~~~~~skL~lVDLAGSER~~~t~~~g~rlkE~~~INkSL~aLg~vI~aL~~~~~~~~~~~~~~~~g~ 354 (443)
T 2owm_A 275 MLKQIHHDLETDDTTERSSRIRLVDLAGSERAKSTEATGQRLREGSNINKSLTTLGRVIAALADPKSSASRPSSPVKSGR 354 (443)
T ss_dssp EEEEEC-------CCEEEEEEEEEECCCCCC--------------CCSSHHHHHHHHHHHHHCC----------------
T ss_pred EEEEEECCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf 99986035678874068877999979887535656776641211001057899999999998604555554443222343
Q ss_pred ------CCCCCCCCCCHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf ------985345546301121003588886213797309998776878999999999731001212345
Q 003511 294 ------GLAYVPYRNSKLTRILKDGLSGNSQTVMVATISPVDSQYHHTLNTLKYADRAKKIKTHIQKNI 356 (814)
Q Consensus 294 ------~~~hIPYRdSKLTrLLkDsLGGnskT~mIatISPs~~~~eETlsTLrfA~Rak~Ikn~~~~N~ 356 (814)
+..||||||||||+||||+|||||+|+|||||||+ +++||++||+||+|||+|+|+|.+|.
T Consensus 355 ~~~~~~~~~hVPYRdSkLTrLLqdsLgGnskT~mIa~iSP~--~~~ETlsTLrfA~rak~I~n~~~vN~ 421 (443)
T 2owm_A 355 GRTPGPANSVVPYRDSVLTWLLKDSLGGNSKTAMIACISPT--DYDETLSTLRYADQAKRIRTRAVVNQ 421 (443)
T ss_dssp ---------CCCGGGSHHHHHSTTTTTSSCEEEEEEEECSS--CHHHHHHHHHHHHHHTTCEECCCCCC
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCC--CHHHHHHHHHHHHHHHHCCCCCEECC
T ss_conf 33445677745574547688888862799708999981643--07899999999999854456333513
No 5
>2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis}
Probab=1.00 E-value=1 Score=696.83 Aligned_cols=342 Identities=40% Similarity=0.654 Sum_probs=309.0
Q ss_pred CCCEEEEEEECCCCCCCC---CCCEEEEEC-CCEEEEECCCCCCHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHHH
Q ss_conf 984399999189998758---997089938-9579997999981011100136875013431003999870988999976
Q 003511 12 STTLTVAIKCRPLTEREQ---GRDIVRVKH-DKEVVVLDPDFSKDYLDHIQNRTKEKNYCFDRAFGPGCTNLDVYTACIS 87 (814)
Q Consensus 12 ~~~IkV~VRvRPl~~~E~---~~~~V~v~~-~~~Vvv~dp~~~~~~l~~~~~~~~~k~F~FD~VF~~~asQeeVy~~~v~ 87 (814)
.++|+|+|||||++++|. ...++.+.+ +.+|++.+|....... ......+.|.||+||+++++|++||+.++.
T Consensus 3 ~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~v~v~~~~~~~~~~---~~~~~~~~f~FD~Vf~~~~~Q~~Vy~~~~~ 79 (350)
T 2vvg_A 3 SDNIKVIVRCRPLNARETRENALNIIRMDEASAQVIVDPPEQEKSAT---QAKKVPRTFTFDAVYDQTSCNYGIFQASFK 79 (350)
T ss_dssp -CBCEEEEEECCCCHHHHHTTCCBCEEEEGGGTEEEECC-----------------EEEECSEEECTTCCHHHHHHHTTH
T ss_pred CCCEEEEEEECCCCHHHHCCCCCEEEEECCCCCEEEEEECCCCCCCC---CCCCCCEEEECCEEECCCCCHHHHHHHHHH
T ss_conf 99869999909799133204995389984999889996045544334---457785276678897997610689987899
Q ss_pred HHHHHHCCCCCEEEEEECCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCEEEECCCCCC
Q ss_conf 66865216864479941468999331522479999733403899998874158998199999999995645442345665
Q 003511 88 SVISGVVQGLNATVFAYGSTGSGKTYTMVGTKSDPGLMVLSLHTIFDLIKKDKNSDEFEVSCSYLEVYNEVIYDLLEKSS 167 (814)
Q Consensus 88 plV~~vl~G~N~tIfAYGqTGSGKTyTM~G~~~~~GIipral~~LF~~i~~~~~~~~f~VsvSylEIYnE~I~DLL~~~~ 167 (814)
|+|+++++|||+||||||||||||||||+|+..++|||||++++||+.+........|.|++||+|||||+|+|||++ .
T Consensus 80 plv~~~l~G~n~tifAYGqTGSGKTyTm~G~~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~-~ 158 (350)
T 2vvg_A 80 PLIDAVLEGFNSTIFAYGQTGAGKTWTMGGNKEEPGAIPNSFKHLFDAINSSSSNQNFLVIGSYLELYNEEIRDLIKN-N 158 (350)
T ss_dssp HHHHHHHTTCCEEEEEECSTTSSHHHHHTBCSSSBCHHHHHHHHHHHHHHTCCTTEEEEEEEEEEEEETTEEEETTTT-E
T ss_pred HHHHHHHCCCCEEEEEECCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCEEEECCCC-C
T ss_conf 999998578852688646899999878535876675588999999999986536875799999999928788885567-7
Q ss_pred CCCEEEECCCCCEEECCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCEEEEEEE
Q ss_conf 85204465999836448089993496799999995520378755557799898748999999998335567712488899
Q 003511 168 AHLELREDPMHGIVVAGLRCIKVHSADKILELLNLGNSRRKTENTEANGTSSRSHAVLEITVKRRQKTEYCNQVMRGKLS 247 (814)
Q Consensus 168 ~~l~ired~~~g~~V~gLtev~V~S~eei~~lL~~G~~~R~~~~T~~N~~SSRSHaIftI~V~~~~~~~~~~~~~~skL~ 247 (814)
..+.+++++.++++|.|++++.|.+++|++.+|..|.++|++++|.+|..|||||+||+|+|++............|+|+
T Consensus 159 ~~l~i~e~~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~~~skl~ 238 (350)
T 2vvg_A 159 TKLPLKEDKTRGIYVDGLSMHRVTTAAELSALMDKGFANRHVAATQMNDTSSRSHSIFMVRIECSEVIENKEVIRVGKLN 238 (350)
T ss_dssp EEECEEEETTTEEEETTCCCEEESSHHHHHHHHHHHHHHC----------CTTCEEEEEEEEEEEEC----CEEEEEEEE
T ss_pred CCCEEEECCCCCEEECCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCEEEEEEE
T ss_conf 68425674899888158779974999999999999984146001457888876529999999995046787617889999
Q ss_pred EEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEEEEECC
Q ss_conf 99768985422236764344888773374999999999825899999853455463011210035888862137973099
Q 003511 248 LVDLAGSERASEANSGGQKLRDGANINRSLLALANCINALGKPQKKGLAYVPYRNSKLTRILKDGLSGNSQTVMVATISP 327 (814)
Q Consensus 248 lVDLAGSER~~~t~~~g~rlkE~~~IN~SL~aLg~VI~aLs~~~~~~~~hIPYRdSKLTrLLkDsLGGnskT~mIatISP 327 (814)
|||||||||..++++.|++++|+.+||+||++||+||.+|++++ .||||||||||+||||+|||||+|+||+||||
T Consensus 239 lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~aLg~vI~aL~~~~----~hvPyRdSkLT~lLqdsLgGnskt~mI~~isP 314 (350)
T 2vvg_A 239 LVDLAGSERQSKTGATGETLVEGAKINLSLSALGLVISKLVEGA----THIPYRDSKLTRLLQDSLGGNSKTLMCANISP 314 (350)
T ss_dssp EEECCCCCC---------------CTTHHHHHHHHHHHHHHHTC----SSCCGGGCHHHHHTTTTTTSSSEEEEEEEECC
T ss_pred EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC----CCCCCCCCHHHHHHHHHCCCCCCEEEEEEECC
T ss_conf 99689887554456507788999887589999999999997389----98876455888998986089962899999688
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 9877687899999999973100121234556562
Q 003511 328 VDSQYHHTLNTLKYADRAKKIKTHIQKNIGSIDT 361 (814)
Q Consensus 328 s~~~~eETlsTLrfA~Rak~Ikn~~~~N~~~~~~ 361 (814)
+..+++||++||+||+|||+|+|+|.+|..+.+.
T Consensus 315 ~~~~~~ETl~TL~fA~rak~i~n~~~~n~~~~~~ 348 (350)
T 2vvg_A 315 ASTNYDETMSTLRYADRAKQIKNKPRINEDPKDA 348 (350)
T ss_dssp BGGGHHHHHHHHHHHHHHTTCBCCCCCCBSCTTC
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCCCEECCCCHHC
T ss_conf 4001899999999999985445666125782010
No 6
>3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A*
Probab=1.00 E-value=1 Score=694.45 Aligned_cols=341 Identities=38% Similarity=0.624 Sum_probs=305.9
Q ss_pred CCCCCCCEEEEEEECCCCCCCC--C-CCEEEEE-CCCEEEEECCCCCCHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHH
Q ss_conf 9999984399999189998758--9-9708993-8957999799998101110013687501343100399987098899
Q 003511 8 ATKKSTTLTVAIKCRPLTEREQ--G-RDIVRVK-HDKEVVVLDPDFSKDYLDHIQNRTKEKNYCFDRAFGPGCTNLDVYT 83 (814)
Q Consensus 8 ~~~~~~~IkV~VRvRPl~~~E~--~-~~~V~v~-~~~~Vvv~dp~~~~~~l~~~~~~~~~k~F~FD~VF~~~asQeeVy~ 83 (814)
.....++|+|+|||||++++|. + ..++.+. ++.++.+.+|... .....+.|.||+||+++++|++||+
T Consensus 16 ~~~~~~~irV~vRvRP~~~~E~~~~~~~~v~~~~~~~~v~v~~~~~~--------~~~~~~~F~FD~Vf~~~~~Q~~Vy~ 87 (372)
T 3b6u_A 16 FQGSSESVRVVVRCRPMNGKEKAASYDKVVDVDVKLGQVSVKNPKGT--------AHEMPKTFTFDAVYDWNAKQFELYD 87 (372)
T ss_dssp -----CBCEEEEEECCCCHHHHHTTCCBCEEEETTTTEEEECCTTCT--------TTCCCEEEECSEEECTTCCHHHHHH
T ss_pred CCCCCCCEEEEEECCCCCHHHHCCCCCEEEEEECCCCEEEEECCCCC--------CCCCCEEEECCEEECCCCCHHHHHH
T ss_conf 67899983999986989935530499638999589987999778877--------7778438876869688674178988
Q ss_pred HHHHHHHHHHCCCCCEEEEEECCCCCCCCEEECCCCC---CCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCEEE
Q ss_conf 9976668652168644799414689993315224799---9973340389999887415899819999999999564544
Q 003511 84 ACISSVISGVVQGLNATVFAYGSTGSGKTYTMVGTKS---DPGLMVLSLHTIFDLIKKDKNSDEFEVSCSYLEVYNEVIY 160 (814)
Q Consensus 84 ~~v~plV~~vl~G~N~tIfAYGqTGSGKTyTM~G~~~---~~GIipral~~LF~~i~~~~~~~~f~VsvSylEIYnE~I~ 160 (814)
.++.|+|+++++|||+||||||||||||||||+|... ++|||||++++||..+... ....|.|++||+|||||+|+
T Consensus 88 ~~~~plv~~~l~G~n~tifAYGqTGSGKTyTM~G~~~~~~~~Giipr~~~~lF~~i~~~-~~~~~~v~vS~~EIYnE~i~ 166 (372)
T 3b6u_A 88 ETFRPLVDSVLQGFNGTIFAYGQTGTGKTYTMEGIRGDPEKRGVIPNSFDHIFTHISRS-QNQQYLVRASYLEIYQEEIR 166 (372)
T ss_dssp HTHHHHHHHHHTTCCEEEEEEESTTSSHHHHHTBCTTSGGGBCHHHHHHHHHHHHHHTC-SSCEEEEEEEEEEEETTEEE
T ss_pred HHHHHHHHHHHCCCEEEEEEECCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHC-CCCCEEEEEEEEEEECCEEE
T ss_conf 78777789986798135886568999998757558998344881889999999986514-57736999989999678889
Q ss_pred ECCCCC-CCCCEEEECCCCCEEECCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCC-C
Q ss_conf 234566-58520446599983644808999349679999999552037875555779989874899999999833556-7
Q 003511 161 DLLEKS-SAHLELREDPMHGIVVAGLRCIKVHSADKILELLNLGNSRRKTENTEANGTSSRSHAVLEITVKRRQKTEY-C 238 (814)
Q Consensus 161 DLL~~~-~~~l~ired~~~g~~V~gLtev~V~S~eei~~lL~~G~~~R~~~~T~~N~~SSRSHaIftI~V~~~~~~~~-~ 238 (814)
|||++. ...+.+++++.++++|.|++++.|.+++|++.+|..|.++|.+++|.+|..|||||+||+|+|++...... .
T Consensus 167 DLL~~~~~~~l~i~e~~~~~v~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~If~i~v~~~~~~~~~~ 246 (372)
T 3b6u_A 167 DLLSKDQTKRLELKERPDTGVYVKDLSSFVTKSVKEIEHVMNVGNQNRSVGATNMNEHSSRSHAIFVITIECSEVGLDGE 246 (372)
T ss_dssp ETTSSCTTCCBCEEEETTTEEEETTCCCEECCSHHHHHHHHHHHHHHHTTTCSSHHHHHHTSEEEEEEEEEEEC-----C
T ss_pred ECCCCCCCCCCEEEECCCCCEECCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCC
T ss_conf 97789777773689879996752898899926799999999999976672545577877764299999999960477887
Q ss_pred CCEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCC
Q ss_conf 71248889999768985422236764344888773374999999999825899999853455463011210035888862
Q 003511 239 NQVMRGKLSLVDLAGSERASEANSGGQKLRDGANINRSLLALANCINALGKPQKKGLAYVPYRNSKLTRILKDGLSGNSQ 318 (814)
Q Consensus 239 ~~~~~skL~lVDLAGSER~~~t~~~g~rlkE~~~IN~SL~aLg~VI~aLs~~~~~~~~hIPYRdSKLTrLLkDsLGGnsk 318 (814)
.....|+|+|||||||||..++++.|.+++|+.+||+||++||+||.||++++. .||||||||||+||||+|||||+
T Consensus 247 ~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~---~hvPyRdSkLT~lLqdsLgGnsk 323 (372)
T 3b6u_A 247 NHIRVGKLNLVDLAGSERQAKTGAQGERLKEATKINLSLSALGNVISALVDGKS---THIPYRDSKLTRLLQDSLGGNAK 323 (372)
T ss_dssp CCEEEEEEEEEECCCCCE----------EEEGGGCCHHHHHHHHHHHHHHCC------CCCGGGSHHHHHTTTTTTSSSE
T ss_pred CCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC---CCCCCCCCHHHHHHHHHCCCCCC
T ss_conf 626788999997988765544575154314675650649999999999863898---87866220889999986299954
Q ss_pred EEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 137973099987768789999999997310012123455656
Q 003511 319 TVMVATISPVDSQYHHTLNTLKYADRAKKIKTHIQKNIGSID 360 (814)
Q Consensus 319 T~mIatISPs~~~~eETlsTLrfA~Rak~Ikn~~~~N~~~~~ 360 (814)
|+||+||||+..+++||++||+||+|||+|+|+|.+|..+.+
T Consensus 324 t~mIa~vsP~~~~~~ETlsTLrfA~rak~I~n~~~~n~~~~~ 365 (372)
T 3b6u_A 324 TVMVANVGPASYNVEETLTTLRYANRAKNIKNKPRVNEDPKD 365 (372)
T ss_dssp EEEEEEECCBGGGHHHHHHHHHHHHHHTTCBCCCCCCC----
T ss_pred EEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEECCCHHH
T ss_conf 899999688524799999999999998645566625577579
No 7
>1goj_A Kinesin, kinesin heavy chain; motor protein, ATPase; HET: ADP; 2.3A {Neurospora crassa} SCOP: c.37.1.9
Probab=1.00 E-value=1 Score=691.96 Aligned_cols=334 Identities=36% Similarity=0.571 Sum_probs=304.7
Q ss_pred CCCCCEEEEEEECCCCCCCC---CCCEEEEECCCEEEEECCCCCCHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHH
Q ss_conf 99984399999189998758---997089938957999799998101110013687501343100399987098899997
Q 003511 10 KKSTTLTVAIKCRPLTEREQ---GRDIVRVKHDKEVVVLDPDFSKDYLDHIQNRTKEKNYCFDRAFGPGCTNLDVYTACI 86 (814)
Q Consensus 10 ~~~~~IkV~VRvRPl~~~E~---~~~~V~v~~~~~Vvv~dp~~~~~~l~~~~~~~~~k~F~FD~VF~~~asQeeVy~~~v 86 (814)
...++|+|+|||||+++.|. ...+|.+.++..+.+.. ....+.|.||+||+++++|++||+.++
T Consensus 3 ~~~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~~~-------------~~~~~~f~FD~Vf~~~~~Q~~Vy~~~~ 69 (355)
T 1goj_A 3 SSANSIKVVARFRPQNRVEIESGGQPIVTFQGPDTCTVDS-------------KEAQGSFTFDRVFDMSCKQSDIFDFSI 69 (355)
T ss_dssp CSSCBCEEEEEECCCCHHHHTTTCCBCEEECSTTEEEECS-------------TTCCEEEECSEEECTTCCHHHHHHHHT
T ss_pred CCCCCEEEEEECCCCCHHHHHCCCCEEEEECCCCEEEECC-------------CCCCCEEEECEEECCCCCCHHHHHHHH
T ss_conf 8999869999889999578506996399986998499726-------------897527761959899876279999999
Q ss_pred HHHHHHHCCCCCEEEEEECCCCCCCCEEECCCC----CCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCEEEEC
Q ss_conf 666865216864479941468999331522479----9997334038999988741589981999999999956454423
Q 003511 87 SSVISGVVQGLNATVFAYGSTGSGKTYTMVGTK----SDPGLMVLSLHTIFDLIKKDKNSDEFEVSCSYLEVYNEVIYDL 162 (814)
Q Consensus 87 ~plV~~vl~G~N~tIfAYGqTGSGKTyTM~G~~----~~~GIipral~~LF~~i~~~~~~~~f~VsvSylEIYnE~I~DL 162 (814)
.|+|+++++|||+||||||||||||||||+|+. .++|||||++++||..+........|.|++||+|||||+|+||
T Consensus 70 ~plv~~~l~G~n~tifAYGqTGSGKTyTm~G~~~~~~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DL 149 (355)
T 1goj_A 70 KPTVDDILNGYNGTVFAYGQTGAGKSYTMMGTSIDDPDGRGVIPRIVEQIFTSILSSAANIEYTVRVSYMEIYMERIRDL 149 (355)
T ss_dssp HHHHHHHTTTCCEEEEEECSTTSSHHHHHTBSCTTSTTTBCHHHHHHHHHHHHHHTSCTTEEEEEEEEEEEEETTEEEET
T ss_pred HHHHHHHHCCCCCEEEEECCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCEEEEC
T ss_conf 99999985798222888899999860675157887766687067999999999871456850899999999978977884
Q ss_pred CCCCCCCCEEEECCCCCEEECCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCEE
Q ss_conf 45665852044659998364480899934967999999955203787555577998987489999999983355677124
Q 003511 163 LEKSSAHLELREDPMHGIVVAGLRCIKVHSADKILELLNLGNSRRKTENTEANGTSSRSHAVLEITVKRRQKTEYCNQVM 242 (814)
Q Consensus 163 L~~~~~~l~ired~~~g~~V~gLtev~V~S~eei~~lL~~G~~~R~~~~T~~N~~SSRSHaIftI~V~~~~~~~~~~~~~ 242 (814)
|++....+.+++++.+|++|.|++++.|.+++|++.+|..|.++|++++|.+|..|||||+||+|+|.+..... +...
T Consensus 150 L~~~~~~l~i~e~~~~g~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~--~~~~ 227 (355)
T 1goj_A 150 LAPQNDNLPVHEEKNRGVYVKGLLEIYVSSVQEVYEVMRRGGNARAVAATNMNQESSRSHSIFVITITQKNVET--GSAK 227 (355)
T ss_dssp TSTTCCSCCEEEETTTEEEETTCCCEECCSHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEEEEEEEEEETTT--TEEE
T ss_pred CCCCCCCCEEEECCCCCEEECCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEECCCC--CCEE
T ss_conf 45766785268858999960687799579999999999999752472334478987776099999999960688--9556
Q ss_pred EEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEE
Q ss_conf 88899997689854222367643448887733749999999998258999998534554630112100358888621379
Q 003511 243 RGKLSLVDLAGSERASEANSGGQKLRDGANINRSLLALANCINALGKPQKKGLAYVPYRNSKLTRILKDGLSGNSQTVMV 322 (814)
Q Consensus 243 ~skL~lVDLAGSER~~~t~~~g~rlkE~~~IN~SL~aLg~VI~aLs~~~~~~~~hIPYRdSKLTrLLkDsLGGnskT~mI 322 (814)
.|+|+|||||||||..++++.|++++|+.+||+||++||+||.+|++++. .||||||||||+||||+||||++|+||
T Consensus 228 ~skL~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~aLg~vI~aL~~~~~---~hvPyRdSkLT~lLqdsLgGns~t~mI 304 (355)
T 1goj_A 228 SGQLFLVDLAGSEKVGKTGASGQTLEEAKKINKSLSALGMVINALTDGKS---SHVPYRDSKLTRILQESLGGNSRTTLI 304 (355)
T ss_dssp EEEEEEEECCCCSCCTTSSSCCCCTTTTGGGTSHHHHHHHHHHHHHHCSC---SCCCGGGCHHHHHTGGGTTSSCEEEEE
T ss_pred EEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC---CCCCCCCCHHHHHHHHHHCCCCCEEEE
T ss_conf 65799998988774432466026678887651679999999999864899---988775579999999972899768999
Q ss_pred EEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 730999877687899999999973100121234556562
Q 003511 323 ATISPVDSQYHHTLNTLKYADRAKKIKTHIQKNIGSIDT 361 (814)
Q Consensus 323 atISPs~~~~eETlsTLrfA~Rak~Ikn~~~~N~~~~~~ 361 (814)
+||||+..+++||++||+||+|||+|+|+|++|......
T Consensus 305 ~~isP~~~~~~ETl~TL~fA~rak~I~n~~~vn~~~~~~ 343 (355)
T 1goj_A 305 INCSPSSYNDAETLSTLRFGMRAKSIKNKAKVNAELSPA 343 (355)
T ss_dssp EEECCBGGGHHHHHHHHHHHHHHHTCBCCCCCCSSSSCS
T ss_pred EEECCCCCCHHHHHHHHHHHHHHHHCCCCCEECCCCCHH
T ss_conf 997963026999999999999972366775567879999
No 8
>3lre_A Kinesin-like protein KIF18A; motor protein, nucleotide binding, microtubule binding, ATP- cell projection, cytoskeleton, glycoprotein, microtubule; HET: ADP; 2.20A {Homo sapiens} SCOP: c.37.1.0
Probab=1.00 E-value=1 Score=690.71 Aligned_cols=336 Identities=42% Similarity=0.679 Sum_probs=301.1
Q ss_pred CCCCCEEEEEEECCCCCCCC--C-CCEEEEECCCEEEEECCCCCCHHH---------HHCCCCCCCCEEEEEEECCCCCC
Q ss_conf 99984399999189998758--9-970899389579997999981011---------10013687501343100399987
Q 003511 10 KKSTTLTVAIKCRPLTEREQ--G-RDIVRVKHDKEVVVLDPDFSKDYL---------DHIQNRTKEKNYCFDRAFGPGCT 77 (814)
Q Consensus 10 ~~~~~IkV~VRvRPl~~~E~--~-~~~V~v~~~~~Vvv~dp~~~~~~l---------~~~~~~~~~k~F~FD~VF~~~as 77 (814)
...++|+|+|||||++.+|. + ..+|.+.++ .+++.||....... .......+++.|.||+||+++++
T Consensus 7 d~~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~FD~vf~~~~~ 85 (355)
T 3lre_A 7 DLCHHMKVVVRVRPENTKEKAAGFHKVVHVVDK-HILVFDPKQEEVSFFHGKKTTNQNVIKKQNKDLKFVFDAVFDETST 85 (355)
T ss_dssp -----CEEEEEECCCCHHHHHTTCCBSEEECSS-SEEEEC------------------------CCEEEECSEEECTTCC
T ss_pred HCCCCCEEEEEECCCCHHHHHCCCCEEEEECCC-CEEEECCCCCCCEEECCCCCCCCCCHHCCCCCCEEEECEEECCCCC
T ss_conf 236787899993969957875599549996599-6698568877411203555444430002678716870568799887
Q ss_pred CHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECC
Q ss_conf 09889999766686521686447994146899933152247999973340389999887415899819999999999564
Q 003511 78 NLDVYTACISSVISGVVQGLNATVFAYGSTGSGKTYTMVGTKSDPGLMVLSLHTIFDLIKKDKNSDEFEVSCSYLEVYNE 157 (814)
Q Consensus 78 QeeVy~~~v~plV~~vl~G~N~tIfAYGqTGSGKTyTM~G~~~~~GIipral~~LF~~i~~~~~~~~f~VsvSylEIYnE 157 (814)
|++||+.++.|+|+++++|||+||||||||||||||||+|+..++||+||++++||..+........|.|.+||+|||||
T Consensus 86 Q~~Vy~~~~~plv~~~l~G~n~tifAYGqTGSGKTyTm~G~~~~~Giipr~~~~lf~~i~~~~~~~~~~v~vS~~EIYnE 165 (355)
T 3lre_A 86 QSEVFEHTTKPILRSFLNGYNCTVLAYGATGAGKTHTMLGSADEPGVMYLTMLHLYKCMDEIKEEKICSTAVSYLEVYNE 165 (355)
T ss_dssp HHHHHHTTHHHHHHHHTTTCCEEEEEECCTTSSHHHHHTBCSSSBCHHHHHHHHHHHHHHHTTTTEEEEEEEEEEEEETT
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEECCCCCCCCEEEHHHHHHHHHHHHHCCCCEEEEEEEEEEEECC
T ss_conf 68999999999999873799469997188999724223168988870102446777766520457359999999999878
Q ss_pred EEEECCCCCCCCCEEEECCCCCEEECCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCC
Q ss_conf 54423456658520446599983644808999349679999999552037875555779989874899999999833556
Q 003511 158 VIYDLLEKSSAHLELREDPMHGIVVAGLRCIKVHSADKILELLNLGNSRRKTENTEANGTSSRSHAVLEITVKRRQKTEY 237 (814)
Q Consensus 158 ~I~DLL~~~~~~l~ired~~~g~~V~gLtev~V~S~eei~~lL~~G~~~R~~~~T~~N~~SSRSHaIftI~V~~~~~~~~ 237 (814)
+|+|||++. ..+.+++++.++++|.|++++.|.+++|++.+|..|.++|++++|.+|..|||||+||+|+|.+......
T Consensus 166 ~i~DLL~~~-~~l~ire~~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~ 244 (355)
T 3lre_A 166 QIRDLLVNS-GPLAVREDTQKGVVVHGLTLHQPKSSEEILHLLDNGNKNRTQHPTDMNATSSRSHAVFQIYLRQQDKTAS 244 (355)
T ss_dssp EEEESSSCC-CCBEEEECTTSCEEEETCCCBCCCSHHHHHHHHHHHHHTSCBC-----CBCTTCEEEEEEEEEEEETTSC
T ss_pred EEEECCCCC-CCCEEEECCCCCEEEEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCC
T ss_conf 779976787-7723688489998853336995399999999999987327743265768778782999999999657788
Q ss_pred -CCCEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCC
Q ss_conf -7712488899997689854222367643448887733749999999998258999998534554630112100358888
Q 003511 238 -CNQVMRGKLSLVDLAGSERASEANSGGQKLRDGANINRSLLALANCINALGKPQKKGLAYVPYRNSKLTRILKDGLSGN 316 (814)
Q Consensus 238 -~~~~~~skL~lVDLAGSER~~~t~~~g~rlkE~~~IN~SL~aLg~VI~aLs~~~~~~~~hIPYRdSKLTrLLkDsLGGn 316 (814)
......|+|+|||||||||..++++.|.|++|+.+||+||++||+||.||++.++ +..||||||||||+||||+||||
T Consensus 245 ~~~~~~~skl~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~-~~~hiPyRdSkLT~lL~dsLgGn 323 (355)
T 3lre_A 245 INQNVRIAKMSLIDLAGSERASTSGAKGTRFVEGTNINRSLLALGNVINALADSKR-KNQHIPYRNSKLTRLLKDSLGGN 323 (355)
T ss_dssp TTCCCCCEEEEEEECCCCCC-----------------CHHHHHHHHHHHHHC---------CCGGGSHHHHHTTTTSSTT
T ss_pred CCCCEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCCCCCCCCCHHHHHHHHHCCCC
T ss_conf 88777799999997988775767787337899999998999999879999871458-89868763378889889864899
Q ss_pred CCEEEEEEECCCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 62137973099987768789999999997310
Q 003511 317 SQTVMVATISPVDSQYHHTLNTLKYADRAKKI 348 (814)
Q Consensus 317 skT~mIatISPs~~~~eETlsTLrfA~Rak~I 348 (814)
|+|+|||||||+..+++||++||+||+|||+|
T Consensus 324 skt~mIa~isP~~~~~~ETl~TL~fA~rak~I 355 (355)
T 3lre_A 324 CQTIMIAAVSPSSVFYDDTYNTLKYANRAKDI 355 (355)
T ss_dssp SEEEEEEEECCBGGGHHHHHHHHHHHHHTC--
T ss_pred CEEEEEEEECCCHHHHHHHHHHHHHHHHHCCC
T ss_conf 65999999488622389999999999985659
No 9
>2zfi_A Kinesin-like protein KIF1A, kinesin heavy chain isoform 5C; alpha and beta protein, enzyme, ATPase, P-loop, motor protein, ATP-binding, coiled coil; HET: ADP; 1.55A {Mus musculus} SCOP: c.37.1.9 PDB: 1vfw_A* 1vfx_A* 1vfz_A* 1vfv_A* 2zfj_A* 2zfk_A* 2zfl_A* 2zfm_A* 1i5s_A* 1i6i_A* 2hxf_C* 1ia0_K* 2hxh_C*
Probab=1.00 E-value=1 Score=687.63 Aligned_cols=336 Identities=36% Similarity=0.611 Sum_probs=299.0
Q ss_pred CCCEEEEEEECCCCCCCC--CCCEEEEECCCEEEEECCCCCCHHHHHCCCCCCCCEEEEEEECCCC--------CCCHHH
Q ss_conf 984399999189998758--9970899389579997999981011100136875013431003999--------870988
Q 003511 12 STTLTVAIKCRPLTEREQ--GRDIVRVKHDKEVVVLDPDFSKDYLDHIQNRTKEKNYCFDRAFGPG--------CTNLDV 81 (814)
Q Consensus 12 ~~~IkV~VRvRPl~~~E~--~~~~V~v~~~~~Vvv~dp~~~~~~l~~~~~~~~~k~F~FD~VF~~~--------asQeeV 81 (814)
..+|+|+|||||++++|. +..++...++..+++.+|... ....+.|.||+||++. ++|++|
T Consensus 3 ~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~i~~~~~~---------~~~~~~f~FD~vf~~~~~~~~~~~asQ~~V 73 (366)
T 2zfi_A 3 GASVKVAVRVRPFNSREMSRDSKCIIQMSGSTTTIVNPKQP---------KETPKSFSFDYSYWSHTSPEDINYASQKQV 73 (366)
T ss_dssp -CCEEEEEEECCCCHHHHHTTCCBCEEEETTEEEECCTTCT---------TSCCEEEECSEEEECSSCTTSSSCCCHHHH
T ss_pred CCCCEEEEECCCCCHHHCCCCCCEEEEECCCCEEEECCCCC---------CCCCEEEECCEEEECCCCCCCCCCCCHHHH
T ss_conf 99808999889998355157997699977996799536777---------777627862469605766654456769999
Q ss_pred HHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEECCCC--CCCCCHHHHHHHHHHHHHHCC-CCCEEEEEEEEEEEECCE
Q ss_conf 99997666865216864479941468999331522479--999733403899998874158-998199999999995645
Q 003511 82 YTACISSVISGVVQGLNATVFAYGSTGSGKTYTMVGTK--SDPGLMVLSLHTIFDLIKKDK-NSDEFEVSCSYLEVYNEV 158 (814)
Q Consensus 82 y~~~v~plV~~vl~G~N~tIfAYGqTGSGKTyTM~G~~--~~~GIipral~~LF~~i~~~~-~~~~f~VsvSylEIYnE~ 158 (814)
|+.++.|+|+++++|||+||||||||||||||||+|+. .++|||||++++||..+.... ....|.|++||+|||||+
T Consensus 74 y~~~~~plv~~~l~G~N~tifAYGqTGSGKTyTm~G~~~~~~~Giipr~~~~lF~~i~~~~~~~~~~~v~vS~~EIYnE~ 153 (366)
T 2zfi_A 74 YRDIGEEMLQHAFEGYNVCIFAYGQTGAGKSYTMMGKQEKDQQGIIPQLCEDLFSRINDTTNDNMSYSVEVSYMEIYCER 153 (366)
T ss_dssp HHHTHHHHHHHHHTTCCEEEEEECSTTSSHHHHHTBCSGGGCBCHHHHHHHHHHHHHHTCCCTTEEEEEEEEEEEEETTE
T ss_pred HHHHHHHHHHHHHCCCEEEEEEECCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCE
T ss_conf 99999999999746971489985899998845864787657786699999999998764026770699999999960884
Q ss_pred EEECCCCCC-CCCEEEECCCCCEEECCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCC
Q ss_conf 442345665-8520446599983644808999349679999999552037875555779989874899999999833556
Q 003511 159 IYDLLEKSS-AHLELREDPMHGIVVAGLRCIKVHSADKILELLNLGNSRRKTENTEANGTSSRSHAVLEITVKRRQKTEY 237 (814)
Q Consensus 159 I~DLL~~~~-~~l~ired~~~g~~V~gLtev~V~S~eei~~lL~~G~~~R~~~~T~~N~~SSRSHaIftI~V~~~~~~~~ 237 (814)
|+|||++.. ..+.+++++..|++|.|++++.|.+++|++.+|..|.++|++++|.+|..|||||+||+|.|.+......
T Consensus 154 v~DLL~~~~~~~l~ire~~~~g~~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~ 233 (366)
T 2zfi_A 154 VRDLLNPKNKGNLRVREHPLLGPYVEDLSKLAVTSYNDIQDLMDSGNKPRTVAATNMNETSSRSHAVFNIIFTQKRHDAE 233 (366)
T ss_dssp EEETTCTTTCSCBCEEEETTTEEEETTCCCEECCSHHHHHHHHHHHHHHHTSGGGGTTTHHHHSEEEEEEEEEEEEECTT
T ss_pred EEECCCCCCCCCCEEEECCCCCEEEECCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCC
T ss_conf 78912355678856888699987976989999779999999999976224611265777777645999999999604677
Q ss_pred C--CCEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC--------CCCCCCCCCCCCHHHH
Q ss_conf 7--71248889999768985422236764344888773374999999999825899--------9998534554630112
Q 003511 238 C--NQVMRGKLSLVDLAGSERASEANSGGQKLRDGANINRSLLALANCINALGKPQ--------KKGLAYVPYRNSKLTR 307 (814)
Q Consensus 238 ~--~~~~~skL~lVDLAGSER~~~t~~~g~rlkE~~~IN~SL~aLg~VI~aLs~~~--------~~~~~hIPYRdSKLTr 307 (814)
. .....|+|+|||||||||..++++.|.|++|+.+||+||++||+||.||++.. +++..||||||||||+
T Consensus 234 ~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~~~~~~~~~~~~hvPyRdSkLT~ 313 (366)
T 2zfi_A 234 TNITTEKVSKISLVDLAGSERADSTGAKGTRLKEGANINKSLTTLGKVISALAEMDSGPNKNKKKKKTDFIPYRDSVLTW 313 (366)
T ss_dssp TTCEEEEEEEEEEEECCCGGGC------CCCHHHHHHHHHHHHHHHHHHHHHHHHC--------------CCGGGSHHHH
T ss_pred CCCCCEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHH
T ss_conf 87541367689999689886455467876300446567678999999999987123454333345667746433328899
Q ss_pred HHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 1003588886213797309998776878999999999731001212345
Q 003511 308 ILKDGLSGNSQTVMVATISPVDSQYHHTLNTLKYADRAKKIKTHIQKNI 356 (814)
Q Consensus 308 LLkDsLGGnskT~mIatISPs~~~~eETlsTLrfA~Rak~Ikn~~~~N~ 356 (814)
||||+|||||+|+|||||||+..+++||++||+||+|||+|+|.|.++.
T Consensus 314 lLqdsLgGnskt~mIa~isP~~~~~~ETlsTLrfA~rak~I~~~~~~~~ 362 (366)
T 2zfi_A 314 LLRENLGGNSRTAMVAALSPADINYDETLSTLRYADRAKQIRNTVSVNH 362 (366)
T ss_dssp HTGGGSSTTCEEEEEEEECCBGGGHHHHHHHHHHHHHTC----------
T ss_pred HHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 9998728996099999968873349999999999999840558888999
No 10
>1t5c_A CENP-E protein, centromeric protein E; kinesin motor-domain-ADP complex, stranded beta-sheet core with solvent exposed alpha-helices; HET: ADP PIN; 2.50A {Homo sapiens}
Probab=1.00 E-value=1 Score=683.21 Aligned_cols=330 Identities=38% Similarity=0.590 Sum_probs=295.9
Q ss_pred CCCCEEEEEEECCCCCCCCCC---CEEEEE-CCCEEEEECCCCCCHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHH
Q ss_conf 998439999918999875899---708993-8957999799998101110013687501343100399987098899997
Q 003511 11 KSTTLTVAIKCRPLTEREQGR---DIVRVK-HDKEVVVLDPDFSKDYLDHIQNRTKEKNYCFDRAFGPGCTNLDVYTACI 86 (814)
Q Consensus 11 ~~~~IkV~VRvRPl~~~E~~~---~~V~v~-~~~~Vvv~dp~~~~~~l~~~~~~~~~k~F~FD~VF~~~asQeeVy~~~v 86 (814)
+.++|+|+|||||++++|... .++.+. ++..+...+ ..+.|.||+||+++++|++||+.++
T Consensus 2 e~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~i~~~~---------------~~~~F~FD~Vf~~~~tQ~~Vy~~~~ 66 (349)
T 1t5c_A 2 EEGAVAVCVRVRPLNSREESLGETAQVYWKTDNNVIYQVD---------------GSKSFNFDRVFHGNETTKNVYEEIA 66 (349)
T ss_dssp -CCCEEEEEEECCCSCSSCTTTTCCCCCEEEETTEEEETT---------------SSCEEECSCEECTTSCHHHHHHHTT
T ss_pred CCCCEEEEEECCCCCHHHHCCCCCCEEEEECCCCEEEECC---------------CCEEEECCEEECCCCCHHHHHHHHH
T ss_conf 9899799998898891564259974799958997699779---------------9828878979899999899999998
Q ss_pred HHHHHHHCCCCCEEEEEECCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCEEEECCCCC
Q ss_conf 66686521686447994146899933152247999973340389999887415899819999999999564544234566
Q 003511 87 SSVISGVVQGLNATVFAYGSTGSGKTYTMVGTKSDPGLMVLSLHTIFDLIKKDKNSDEFEVSCSYLEVYNEVIYDLLEKS 166 (814)
Q Consensus 87 ~plV~~vl~G~N~tIfAYGqTGSGKTyTM~G~~~~~GIipral~~LF~~i~~~~~~~~f~VsvSylEIYnE~I~DLL~~~ 166 (814)
.|+|+++++|||+||||||||||||||||+|+.+++|||||++++||..+.... ...|.|++||+|||||+|+|||++.
T Consensus 67 ~plv~~~l~G~n~tifAYGqTGSGKTyTM~G~~~~~Giipr~~~~lF~~i~~~~-~~~~~v~vS~~EIYnE~i~DLL~~~ 145 (349)
T 1t5c_A 67 APIIDSAIQGYNGTIFAYGQTASGKTYTMMGSEDHLGVIPRAIHDIFQKIKKFP-DREFLLRVSYMEIYNETITDLLCGT 145 (349)
T ss_dssp HHHHHHHHTTCCEEEEEEESTTSSHHHHHTBCSSSBCHHHHHHHHHHHHGGGCT-TEEEEEEEEEEEEETTEEEESSSSS
T ss_pred HHHHHHHHCCCCCCEEEECCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCC-CCCEEEEEEEEEEECCEEEECCCCC
T ss_conf 999999874886405621589999876874688887458899999999997476-8867999889998487778866787
Q ss_pred C--CCCEEEECCCCCEEECCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCC---CCCE
Q ss_conf 5--8520446599983644808999349679999999552037875555779989874899999999833556---7712
Q 003511 167 S--AHLELREDPMHGIVVAGLRCIKVHSADKILELLNLGNSRRKTENTEANGTSSRSHAVLEITVKRRQKTEY---CNQV 241 (814)
Q Consensus 167 ~--~~l~ired~~~g~~V~gLtev~V~S~eei~~lL~~G~~~R~~~~T~~N~~SSRSHaIftI~V~~~~~~~~---~~~~ 241 (814)
. ..+.+++|+.++++|.|++++.|.+++|++.+|..|.++|++++|.+|..|||||+||+|.|++...... .+..
T Consensus 146 ~~~~~l~i~ed~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~~~~ 225 (349)
T 1t5c_A 146 QKMKPLIIREDVNRNVYVADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSHTIFRMILESREKGEPSNCEGSV 225 (349)
T ss_dssp CTTCCEEEEETTTTEEEETTCCCEECSSHHHHHHHHHHHHHTTSSSSSSSSCTTTTCEEEEEEEEEEEECC-------CE
T ss_pred CCCCCCEEEECCCCCEEECCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCE
T ss_conf 77877469988999987448879986899999999997523345233657788887639999999985168876767637
Q ss_pred EEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEE
Q ss_conf 48889999768985422236764344888773374999999999825899999853455463011210035888862137
Q 003511 242 MRGKLSLVDLAGSERASEANSGGQKLRDGANINRSLLALANCINALGKPQKKGLAYVPYRNSKLTRILKDGLSGNSQTVM 321 (814)
Q Consensus 242 ~~skL~lVDLAGSER~~~t~~~g~rlkE~~~IN~SL~aLg~VI~aLs~~~~~~~~hIPYRdSKLTrLLkDsLGGnskT~m 321 (814)
..|+|+|||||||||..++++.|.+++|+.+||+||++||+||.+|++++. ..||||||||||+||||+||||++|+|
T Consensus 226 ~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~--~~hvPyRdSkLT~lLqdsLgGnskt~m 303 (349)
T 1t5c_A 226 KVSHLNLVDLAGSERAAQTGAAGVRLKEGCNINRSLFILGQVIKKLSDGQV--GGFINYRDSKLTRILQNSLGGNAKTRI 303 (349)
T ss_dssp EEEEEEEEECCCGGGTC-------CCCSSSCCCHHHHHHHHHHHHHHHTCC--TTSSCGGGSHHHHHTGGGTTSSSEEEE
T ss_pred EEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC--CCCCCCCCCHHHHHHHHHCCCCCEEEE
T ss_conf 899999997998753221478641113354776899999999999855687--777765563778999986189962999
Q ss_pred EEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 973099987768789999999997310012123455656
Q 003511 322 VATISPVDSQYHHTLNTLKYADRAKKIKTHIQKNIGSID 360 (814)
Q Consensus 322 IatISPs~~~~eETlsTLrfA~Rak~Ikn~~~~N~~~~~ 360 (814)
||||||+ +++||++||+||+|||+|+|+|.+|.....
T Consensus 304 I~~isP~--~~~ETlsTL~fA~rak~I~n~~~vn~~~~~ 340 (349)
T 1t5c_A 304 ICTITPV--SFDETLTALQFASTAKYMKNTPYVNEVSTD 340 (349)
T ss_dssp EEEECTT--CSHHHHHHHHHHHHHTTCCCCCCCCEEC--
T ss_pred EEEECCC--CHHHHHHHHHHHHHHHHCCCCCEECCCCCC
T ss_conf 9994777--789999999999997453667653667888
Done!