Query 003513
Match_columns 814
No_of_seqs 397 out of 4305
Neff 10.1
Searched_HMMs 29240
Date Tue Mar 26 17:46:39 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/003513.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1563-1566//hhsearch_pdb/003513hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2a5y_B CED-4; apoptosis; HET: 1.0 1 1 357.8 24.4 316 67-401 125-471 (549)
2 3sfz_A APAF-1, apoptotic pepti 1.0 1 1 331.5 29.1 315 65-400 119-451 (1249)
3 1vt4_I APAF-1 related killer D 1.0 1 1 313.6 18.6 289 69-395 127-437 (1221)
4 1z6t_A APAF-1, apoptotic prote 1.0 1 1 290.5 26.4 309 66-398 120-449 (591)
5 4ecn_A Leucine-rich repeat pro 1.0 1 1 223.1 13.6 334 414-777 435-838 (876)
6 4eco_A Uncharacterized protein 1.0 1 1 219.5 14.4 329 419-778 239-599 (636)
7 3rgz_A Protein brassinosteroid 1.0 1 1 215.1 8.0 227 449-694 294-550 (768)
8 3rgz_A Protein brassinosteroid 1.0 1 1 213.2 10.3 286 472-780 393-741 (768)
9 2z81_A CD282 antigen, TOLL-lik 1.0 1 1 208.7 18.2 145 410-557 11-160 (549)
10 3vq2_A TLR4, TOLL-like recepto 1.0 1 1 206.0 18.3 62 715-778 493-557 (606)
No 1
>2a5y_B CED-4; apoptosis; HET: ATP; 2.60A {Caenorhabditis elegans} SCOP: a.4.5.80 a.77.1.3 c.37.1.20 PDB: 3lqq_A* 3lqr_A*
Probab=1.00 E-value=1 Score=357.81 Aligned_cols=316 Identities=14% Similarity=0.156 Sum_probs=252.0
Q ss_pred CCCCCCCCHHHHHHHHHHHHHCC--CCCEEEEEECCCCCCHHHHHHHHHH--HHCCCCCCCCEEEEEEECCCC--CHHHH
Q ss_conf 99995124168999999997349--9951999992899909999999986--204499999818999987866--99999
Q 003513 67 PTEPTVVGLQSQLEQVWRCLVQE--PAAGIIGLYGMGGVGKTTLLTQINN--KFVDNPKDFDYVIWVVVSKDL--QLEKI 140 (814)
Q Consensus 67 ~~~~~~vgr~~~~~~l~~~L~~~--~~~~~i~i~G~~GiGKTtLa~~~~~--~~~~~~~~f~~~~wv~~~~~~--~~~~~ 140 (814)
|..+..+||+.++++|.++|..+ +..++|+|+||||+||||||+++|+ +. ++..+|+.++|+++++.. +...+
T Consensus 125 p~~~~~~GR~~~~~~l~~~L~~~~~~~~~vv~I~G~gGvGKTtLA~~v~~~~~~-~~~~~F~~~~wv~vs~~~~~~~~~~ 203 (549)
T 2a5y_B 125 PKQMTCYIREYHVDRVIKKLDEMCDLDSFFLFLHGRAGSGKSVIASQALSKSDQ-LIGINYDSIVWLKDSGTAPKSTFDL 203 (549)
T ss_dssp BCCCCSCCCHHHHHHHHHHHHHHTTSSSEEEEEECSTTSSHHHHHHHHHHHCSS-TBTTTBSEEEEEECCCCSTTHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHH-HHHCCCCCEEEEEECCCCCCCHHHH
T ss_conf 997760784179999999872515789628999869999889999999984069-8746699579999789878799999
Q ss_pred HHHHHHHHCCCCC-----CCCCCCHHHHHHHHHHHHCCC-CEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCC
Q ss_conf 9999988089998-----778889899999999995039-6699982434710101016637999299995189310135
Q 003513 141 QETIGKKIGLCND-----SWKNKSLEEKAHDIFKTLSKK-KFALLLDDLWERVDLKKIGVPLPKNSAVVFTTRFVDVCGG 214 (814)
Q Consensus 141 ~~~i~~~l~~~~~-----~~~~~~~~~~~~~l~~~l~~~-~~LlVlDdv~~~~~~~~l~~~~~~~~~iiiTtR~~~~~~~ 214 (814)
++.|+.+++...+ .....+...+...+.+.++++ |+||||||||+..++ .+. ...|++||||||+..++..
T Consensus 204 ~~~il~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~kr~LlVLDdv~~~~~~-~~~--~~~gs~ilvTTR~~~v~~~ 280 (549)
T 2a5y_B 204 FTDILLMLKSEDDLLNFPSVEHVTSVVLKRMICNALIDRPNTLFVFDDVVQEETI-RWA--QELRLRCLVTTRDVEISNA 280 (549)
T ss_dssp HHHHHHHHTTTSCCTTCCCCTTCCHHHHHHHHHHHHTTSTTEEEEEEEECCHHHH-HHH--HHTTCEEEEEESBGGGGGG
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHH-CCC--CCCCCEEEEECCCHHHHHH
T ss_conf 9999999853755345555331469999999999976898489999799971441-543--2699889997497799997
Q ss_pred CC-CCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
Q ss_conf 77-51027713699786999999995534436899957999999988199738999999885059998999999999941
Q 003513 215 ME-ARRMFKVACLSDEDAWELFREKVGEETIESHHSLPELAQTVAKECRGLPLALITIGRAMAYKKTPEEWRYAIEVLRR 293 (814)
Q Consensus 215 ~~-~~~~~~l~~l~~~ea~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~Plai~~~~~~l~~~~~~~~~~~~l~~l~~ 293 (814)
+. ....|++++|+.+|+++||.++++... ..+..++++.+|+++|+|+||||+++|+.++.+ . |... ..+..
T Consensus 281 ~~~~~~~~~l~~L~~~ea~~Lf~~~a~~~~--~~~~~~~~~~~I~~~c~GlPLAl~~~g~~l~~~-~---w~~~-~~l~~ 353 (549)
T 2a5y_B 281 ASQTCEFIEVTSLEIDECYDFLEAYGMPMP--VGEKEEDVLNKTIELSSGNPATLMMFFKSCEPK-T---FEKM-AQLNN 353 (549)
T ss_dssp CCSCEEEEECCCCCHHHHHHHHHHTSCCCC----CHHHHHHHHHHHHHTTCHHHHHHHHTTCCSS-S---HHHH-HHHHH
T ss_pred CCCCCEEEECCCCCHHHHHHHHHHHHCCCC--CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC-H---HHHH-HHHHH
T ss_conf 088973898999898999999998744899--855689999999999599839999999984434-4---8999-87578
Q ss_pred HHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHH-----------HHCCCCCCCCCCHHHHHHHHHHC--CCCCCC--CCC
Q ss_conf 000017973112111223026999244689984-----------63178999732867799998743--988776--554
Q 003513 294 SASEFAGLGKEVYPLLKFSYDCLPNDAIRSCFL-----------YCCLYPEDFSIDKRDLIDCWMCE--GFLEGD--KFG 358 (814)
Q Consensus 294 ~~~~~~~~~~~~~~~l~~s~~~L~~~~~k~~~~-----------~~~~~p~~~~i~~~~l~~~w~~~--g~i~~~--~~~ 358 (814)
..+... ...+..++..||+.|+. +.|.||+ +||+||+++.++ +.+|+++ ||+... ...
T Consensus 354 ~l~~~~--~~~i~~~l~~Sy~~L~~-~lk~~f~~Ls~~er~l~~~ls~fp~~~~i~----i~~w~a~~~G~i~~~~~~~~ 426 (549)
T 2a5y_B 354 KLESRG--LVGVECITPYSYKSLAM-ALQRCVEVLSDEDRSALAFAVVMPPGVDIP----VKLWSCVIPVDICSNEEEQL 426 (549)
T ss_dssp HHHHHC--SSTTCCCSSSSSSSHHH-HHHHHHHTSCHHHHHHTTGGGSSCTTCCEE----HHHHHHHSCC-------CCC
T ss_pred HHHCCC--HHHHHHHHHCCCCCCCH-HHHHHHHCCCHHHHHHHHHEEEECCCCEEE----EEEEEEECCCEECCCCCCCC
T ss_conf 761364--77789897516202267-999997526522336743235608997666----53311013550026778999
Q ss_pred CCHHHHHHHHHHHHHCCCCCCC---CCCEEEHHHHHHHHHHHHHHH
Q ss_conf 1101578999999811322125---861443178887799988520
Q 003513 359 TQNQGYYIVGTLVHACLLEEVE---DDQVKMHDVVRDMALWITCEI 401 (814)
Q Consensus 359 ~~~~~~~~l~~L~~~~li~~~~---~~~~~mH~li~~~~~~~~~~~ 401 (814)
.++.+. ++++|+++||++... ..+|+|||+||+||++++.+.
T Consensus 427 ~~~~~~-~l~~L~~rsLl~~~~~~~~~~~~mHdlv~~~a~~~~~~~ 471 (549)
T 2a5y_B 427 DDEVAD-RLKRLSKRGALLSGKRMPVLTFKIDHIIHMFLKHVVDAQ 471 (549)
T ss_dssp THHHHH-HHHHTTTBSSCSEEECSSSCEEECCHHHHHHHHTTSCTH
T ss_pred HHHHHH-HHHHHHHCCCEEEECCCCCEEEEECHHHHHHHHHHHHHH
T ss_conf 999999-999998758836714798049996769999999998898
No 2
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=1.00 E-value=1 Score=331.52 Aligned_cols=315 Identities=20% Similarity=0.262 Sum_probs=251.7
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHCC-CCCEEEEEECCCCCCHHHHHHHHHHHHCCCCC-CCCEEEEEEECCCCC--HHHH
Q ss_conf 6899995124168999999997349-99519999928999099999999862044999-998189999878669--9999
Q 003513 65 ERPTEPTVVGLQSQLEQVWRCLVQE-PAAGIIGLYGMGGVGKTTLLTQINNKFVDNPK-DFDYVIWVVVSKDLQ--LEKI 140 (814)
Q Consensus 65 ~~~~~~~~vgr~~~~~~l~~~L~~~-~~~~~i~i~G~~GiGKTtLa~~~~~~~~~~~~-~f~~~~wv~~~~~~~--~~~~ 140 (814)
.|+.++.||||++++++|.++|... +..++|+|+||||+||||||++++++...... .++.++|+++++... ....
T Consensus 119 ~p~~~~~~vgR~~~~~~l~~~l~~~~~~~~~v~i~G~gG~GKTtLa~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 198 (1249)
T 3sfz_A 119 VPQRPVIFVTRKKLVHAIQQKLWKLNGEPGWVTIYGMAGCGKSVLAAEAVRDHSLLEGCFSGGVHWVSIGKQDKSGLLMK 198 (1249)
T ss_dssp CCCCCSSCCCCHHHHHHHHHHHHTTTTSCEEEEEECSTTSSHHHHHHHHTCCHHHHTTTSTTCEEEEECCSCCHHHHHHH
T ss_pred CCCCCCEECCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHCCHHHHHHHCCCEEEEEEECCCCCHHHHHH
T ss_conf 79998641257999999999986135887779999189888889999986075678862788179999788572679999
Q ss_pred HHHHHHHHCCCCC--CCCCCCHHHHHHHHHHHHCCC--CEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCC-C
Q ss_conf 9999988089998--778889899999999995039--6699982434710101016637999299995189310135-7
Q 003513 141 QETIGKKIGLCND--SWKNKSLEEKAHDIFKTLSKK--KFALLLDDLWERVDLKKIGVPLPKNSAVVFTTRFVDVCGG-M 215 (814)
Q Consensus 141 ~~~i~~~l~~~~~--~~~~~~~~~~~~~l~~~l~~~--~~LlVlDdv~~~~~~~~l~~~~~~~~~iiiTtR~~~~~~~-~ 215 (814)
+..++..+..... .....+.+.+...++..+.++ |+||||||+|+..++..+ +.|++||+|||++.++.. +
T Consensus 199 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~LlvlDd~~~~~~~~~~----~~~~~ilvTtR~~~~~~~~~ 274 (1249)
T 3sfz_A 199 LQNLCMRLDQEESFSQRLPLNIEEAKDRLRVLMLRKHPRSLLILDDVWDPWVLKAF----DNQCQILLTTRDKSVTDSVM 274 (1249)
T ss_dssp HHHHHHHHTTTCTTCSSCCSSHHHHHHHHHHHTSSSSCSCEEEEESCCCHHHHTTT----CSSCEEEEEESSTTTTTTCC
T ss_pred HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHH----CCCCEEEEECCCHHHHHHHC
T ss_conf 99999986553033347887778999999999735678789999567997788763----68978999927789987634
Q ss_pred CCCCEEEECC-CCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
Q ss_conf 7510277136-997869999999955344368999579999999881997389999998850599989999999999410
Q 003513 216 EARRMFKVAC-LSDEDAWELFREKVGEETIESHHSLPELAQTVAKECRGLPLALITIGRAMAYKKTPEEWRYAIEVLRRS 294 (814)
Q Consensus 216 ~~~~~~~l~~-l~~~ea~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~Plai~~~~~~l~~~~~~~~~~~~l~~l~~~ 294 (814)
.....+.+++ |+++|+++||...++... +..++.+++|+++|+|+||||+++|++++.+. ..|..+++.+...
T Consensus 275 ~~~~~~~~~~~l~~~~a~~l~~~~~~~~~----~~~~~~~~~i~~~~~glPLal~~~~~~l~~~~--~~~~~~l~~l~~~ 348 (1249)
T 3sfz_A 275 GPKHVVPVESGLGREKGLEILSLFVNMKK----EDLPAEAHSIIKECKGSPLVVSLIGALLRDFP--NRWAYYLRQLQNK 348 (1249)
T ss_dssp SCBCCEECCSSCCHHHHHHHHHHHHTSCS----TTCCTHHHHHHHHTTTCHHHHHHHHHHHHHSS--SCHHHHHHHHHSC
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHHCCCH----HHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCH--HHHHHHHHHHHHH
T ss_conf 88437982588887889999998657981----34838899999984997799999999862480--5799999998650
Q ss_pred HCCCC-----CCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 00017-----9731121112230269992446899846317899973286779999874398877655411015789999
Q 003513 295 ASEFA-----GLGKEVYPLLKFSYDCLPNDAIRSCFLYCCLYPEDFSIDKRDLIDCWMCEGFLEGDKFGTQNQGYYIVGT 369 (814)
Q Consensus 295 ~~~~~-----~~~~~~~~~l~~s~~~L~~~~~k~~~~~~~~~p~~~~i~~~~l~~~w~~~g~i~~~~~~~~~~~~~~l~~ 369 (814)
.+..- ...+.+..++..||+.|++ +.|.||++|++||+++.|+.+.++.+|.++ ++.+..++++
T Consensus 349 ~~~~~~~~~~~~~~~~~~~l~~s~~~L~~-~~~~~~~~l~~f~~~~~i~~~~~~~~~~~~----------~~~~~~~l~~ 417 (1249)
T 3sfz_A 349 QFKRIRKSSSYDYEALDEAMSISVEMLRE-DIKDYYTDLSILQKDVKVPTKVLCVLWDLE----------TEEVEDILQE 417 (1249)
T ss_dssp CCCCSSCTTCTTHHHHHHHHHHHHHTSCT-TTHHHHHHGGGSCTTCCEEHHHHHHHHTCC----------HHHHHHHHHH
T ss_pred HHHHCCCCCCCCHHHHHHHHHHHHHHCCH-HHHHHHHHHCCCCCCCEECHHHHHHHHCCC----------HHHHHHHHHH
T ss_conf 44303465564467799999989986799-999999972813799751899999885898----------8899999999
Q ss_pred HHHHCCCCCCCCC---CEEEHHHHHHHHHHHHHH
Q ss_conf 9981132212586---144317888779998852
Q 003513 370 LVHACLLEEVEDD---QVKMHDVVRDMALWITCE 400 (814)
Q Consensus 370 L~~~~li~~~~~~---~~~mH~li~~~~~~~~~~ 400 (814)
|+++||++....+ +|+||+++|++++....+
T Consensus 418 L~~~sl~~~~~~~~~~~~~~h~l~~~~~~~~~~~ 451 (1249)
T 3sfz_A 418 FVNKSLLFCNRNGKSFCYYLHDLQVDFLTEKNRS 451 (1249)
T ss_dssp HHHTTSCEEEESSSSEEEECCHHHHHHHHHHTGG
T ss_pred HHHCCCEEEECCCCCEEEEECHHHHHHHHHHHHH
T ss_conf 9744633896379811899668999998745067
No 3
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A*
Probab=1.00 E-value=1 Score=313.63 Aligned_cols=289 Identities=15% Similarity=0.203 Sum_probs=227.9
Q ss_pred CCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCE-EEEEEECCCCCHHHHHHHHHHH
Q ss_conf 995124168999999997349995199999289990999999998620449999981-8999987866999999999988
Q 003513 69 EPTVVGLQSQLEQVWRCLVQEPAAGIIGLYGMGGVGKTTLLTQINNKFVDNPKDFDY-VIWVVVSKDLQLEKIQETIGKK 147 (814)
Q Consensus 69 ~~~~vgr~~~~~~l~~~L~~~~~~~~i~i~G~~GiGKTtLa~~~~~~~~~~~~~f~~-~~wv~~~~~~~~~~~~~~i~~~ 147 (814)
.+..|||+.++++|.++|...+..++|+|+||||+||||||++++++. ++...|+. ++|+++++.++...++..++..
T Consensus 127 tk~~VGRe~eLeeL~elL~~~d~~RVV~IvGmGGIGKTTLAk~Vy~d~-rV~~~Fd~gV~WVsVs~~~d~~~IL~~Ll~l 205 (1221)
T 1vt4_I 127 AKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSY-KVQCKMDFKIFWLNLKNCNSPETVLEMLQKL 205 (1221)
T ss_dssp CCSCCCCHHHHHHHHHHHHHCCSSCEEEECCSTTSSHHHHHHHHHHHC-HHHHHHSSCEEEEECCCSSSHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHH-HHHHHCCCCEEEEEECCCCCHHHHHHHHHHH
T ss_conf 787789289999999997435897189997699966799999999714-9887489938999828999999999999999
Q ss_pred HCCCC----CCCC-----CCCHHHHHHHHHHHH---CCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCC
Q ss_conf 08999----8778-----889899999999995---03966999824347101010166379992999951893101357
Q 003513 148 IGLCN----DSWK-----NKSLEEKAHDIFKTL---SKKKFALLLDDLWERVDLKKIGVPLPKNSAVVFTTRFVDVCGGM 215 (814)
Q Consensus 148 l~~~~----~~~~-----~~~~~~~~~~l~~~l---~~~~~LlVlDdv~~~~~~~~l~~~~~~~~~iiiTtR~~~~~~~~ 215 (814)
++... .... ..+.+.+...+.+.+ .++|+||||||||+...|+.+. .|++||||||++.++..+
T Consensus 206 L~~i~~~~~~~~d~~~~ip~~leeL~e~Lr~lL~~l~~KRvLLVLDDVwd~eqLe~f~----pGSRILVTTRd~~Va~~l 281 (1221)
T 1vt4_I 206 LYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFN----LSCKILLTTRFKQVTDFL 281 (1221)
T ss_dssp HHHHCSSSTTTSCCCSSHHHHHHHHHHHHHHHHHHSTTSSCEEEEESCCCHHHHHHHH----SSCCEEEECSCSHHHHHH
T ss_pred HHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHC----CCEEEEEECCCHHHHHHC
T ss_conf 8622721022001346799999999999999998504788799871868189998647----982999944373799866
Q ss_pred CCCCEEEEC------CCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC-CHHHHHHHH
Q ss_conf 751027713------6997869999999955344368999579999999881997389999998850599-989999999
Q 003513 216 EARRMFKVA------CLSDEDAWELFREKVGEETIESHHSLPELAQTVAKECRGLPLALITIGRAMAYKK-TPEEWRYAI 288 (814)
Q Consensus 216 ~~~~~~~l~------~l~~~ea~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~Plai~~~~~~l~~~~-~~~~~~~~l 288 (814)
.....+.++ +|+++||++||.+..+.. ..+...++ |+|+||||+++|+.++.+. +.+.|...
T Consensus 282 ~g~~vy~LeL~d~dL~LS~eEA~eLF~~~~g~~-------~eeL~~eI---CgGLPLALkLaGs~Lr~k~~s~eeW~~~- 350 (1221)
T 1vt4_I 282 SAATTTHISLDHHSMTLTPDEVKSLLLKYLDCR-------PQDLPREV---LTTNPRRLSIIAESIRDGLATWDNWKHV- 350 (1221)
T ss_dssp HHHSSCEEEECSSSSCCCHHHHHHHHHHHHCCC-------TTTHHHHH---CCCCHHHHHHHHHHHHHSCSSHHHHHHC-
T ss_pred CCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCC-------HHHHHHHH---HCCCHHHHHHHHHHHHCCCCCHHHHHCC-
T ss_conf 897089946865568969999999999974998-------89999999---6989999999999984889979998669-
Q ss_pred HHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHH-HHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
Q ss_conf 999410000179731121112230269992446-8998463178999732867799998743988776554110157899
Q 003513 289 EVLRRSASEFAGLGKEVYPLLKFSYDCLPNDAI-RSCFLYCCLYPEDFSIDKRDLIDCWMCEGFLEGDKFGTQNQGYYIV 367 (814)
Q Consensus 289 ~~l~~~~~~~~~~~~~~~~~l~~s~~~L~~~~~-k~~~~~~~~~p~~~~i~~~~l~~~w~~~g~i~~~~~~~~~~~~~~l 367 (814)
..+.+..++..||+.|++ +. |.||++||+||+++.|+.+.++.+|.++| ++.+..++
T Consensus 351 ------------~~~~I~aaLelSYd~Lp~-eelK~cFL~LAIFPed~~I~~elLa~LW~aeG---------eedAe~~L 408 (1221)
T 1vt4_I 351 ------------NCDKLTTIIESSLNVLEP-AEYRKMFDRLSVFPPSAHIPTILLSLIWFDVI---------KSDVMVVV 408 (1221)
T ss_dssp ------------SCHHHHHHHHHHHHHSCT-THHHHHHHHTTSSCTTSCEEHHHHHHHHCSSC---------SHHHHHHH
T ss_pred ------------CHHHHHHHHHHHHHHCCH-HHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCC---------HHHHHHHH
T ss_conf ------------861899999999984889-99999999971779999877999998766778---------89999999
Q ss_pred HHHHHHCCCCCC-CCCCEEEHHHHHHHHH
Q ss_conf 999981132212-5861443178887799
Q 003513 368 GTLVHACLLEEV-EDDQVKMHDVVRDMAL 395 (814)
Q Consensus 368 ~~L~~~~li~~~-~~~~~~mH~li~~~~~ 395 (814)
++|+++||++.. ...+|+|||++++++.
T Consensus 409 ~eLvdRSLLq~d~~~~rYrMHDLllELr~ 437 (1221)
T 1vt4_I 409 NKLHKYSLVEKQPKESTISIPSIYLELKV 437 (1221)
T ss_dssp HHHHTSSSSSBCSSSSEEBCCCHHHHHHH
T ss_pred HHHHHHCCEEEECCCCEEEEHHHHHHHHC
T ss_conf 99996198898689998986099999856
No 4
>1z6t_A APAF-1, apoptotic protease activating factor 1; caspase activation, ADP, nucleotide binding, CARD, apoptosis; HET: ADP; 2.21A {Homo sapiens}
Probab=1.00 E-value=1 Score=290.46 Aligned_cols=309 Identities=20% Similarity=0.277 Sum_probs=237.2
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCC-CCCEEEEEECCCCCCHHHHHHHHHHHHCCC-CCCC-CEEEEEEECCCCCHHHHHH
Q ss_conf 899995124168999999997349-995199999289990999999998620449-9999-8189999878669999999
Q 003513 66 RPTEPTVVGLQSQLEQVWRCLVQE-PAAGIIGLYGMGGVGKTTLLTQINNKFVDN-PKDF-DYVIWVVVSKDLQLEKIQE 142 (814)
Q Consensus 66 ~~~~~~~vgr~~~~~~l~~~L~~~-~~~~~i~i~G~~GiGKTtLa~~~~~~~~~~-~~~f-~~~~wv~~~~~~~~~~~~~ 142 (814)
|+.++.||||+.++++|.++|... +..++|+|+||||+||||||.+++++. .. ...| +.++|++++.. +...+..
T Consensus 120 P~~~~~~vGR~~~l~~L~~~L~~~~~~~~~v~I~G~~GiGKTtLa~~~~~~~-~~~~~~f~~~v~wv~~~~~-~~~~~~~ 197 (591)
T 1z6t_A 120 PQRPVVFVTRKKLVNAIQQKLSKLKGEPGWVTIHGMAGCGKSVLAAEAVRDH-SLLEGCFPGGVHWVSVGKQ-DKSGLLM 197 (591)
T ss_dssp CCCCSSCCCCHHHHHHHHHHHTTSTTSCEEEEEECCTTSSHHHHHHHHHCCH-HHHHHHCTTCEEEEEEESC-CHHHHHH
T ss_pred CCCCCEECCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHCH-HHHHHHCCCCEEEEECCCC-CHHHHHH
T ss_conf 9998714052999999999986036888469997699898899999998355-6888528996599977877-6688999
Q ss_pred H---HHHHHCCCC--CCCCCCCHHHHHHHHHHHHCC--CCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCC
Q ss_conf 9---998808999--877888989999999999503--966999824347101010166379992999951893101357
Q 003513 143 T---IGKKIGLCN--DSWKNKSLEEKAHDIFKTLSK--KKFALLLDDLWERVDLKKIGVPLPKNSAVVFTTRFVDVCGGM 215 (814)
Q Consensus 143 ~---i~~~l~~~~--~~~~~~~~~~~~~~l~~~l~~--~~~LlVlDdv~~~~~~~~l~~~~~~~~~iiiTtR~~~~~~~~ 215 (814)
. ++..++... ......+.......+...+.+ +++||||||+|+...+..+ +.+++||+|||+..++..+
T Consensus 198 ~l~~l~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~LLVLDdv~~~~~l~~l----~~~~~ilvTsR~~~~~~~~ 273 (591)
T 1z6t_A 198 KLQNLCTRLDQDESFSQRLPLNIEEAKDRLRILMLRKHPRSLLILDDVWDSWVLKAF----DSQCQILLTTRDKSVTDSV 273 (591)
T ss_dssp HHHHHHHHHCSSCCSCSSCCCSHHHHHHHHHHHHHHTCTTCEEEEEEECCHHHHHTT----CSSCEEEEEESCGGGGTTC
T ss_pred HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHH----CCCCEEEEECCCCHHHHHC
T ss_conf 999999985035565567998899999999999706799869998589987999876----3798699989881777734
Q ss_pred CCCCEEEE---CCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH
Q ss_conf 75102771---369978699999999553443689995799999998819973899999988505999899999999994
Q 003513 216 EARRMFKV---ACLSDEDAWELFREKVGEETIESHHSLPELAQTVAKECRGLPLALITIGRAMAYKKTPEEWRYAIEVLR 292 (814)
Q Consensus 216 ~~~~~~~l---~~l~~~ea~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~Plai~~~~~~l~~~~~~~~~~~~l~~l~ 292 (814)
. ...+++ ++|+.+|+++||...++... ....+.+.+|+++|+|+|+||..+|+.++... ..|...++.+.
T Consensus 274 ~-~~~~~v~~l~~L~~~ea~~L~~~~~~~~~----~~~~~~~~~i~~~~~G~PLal~~~a~~l~~~~--~~w~~~l~~l~ 346 (591)
T 1z6t_A 274 M-GPKYVVPVESSLGKEKGLEILSLFVNMKK----ADLPEQAHSIIKECKGSPLVVSLIGALLRDFP--NRWEYYLKQLQ 346 (591)
T ss_dssp C-SCEEEEECCSSCCHHHHHHHHHHHHTSCG----GGSCTHHHHHHHHHTTCHHHHHHHHHHHHHST--TCHHHHHHHHH
T ss_pred C-CCCEEEECCCCCCHHHHHHHHHHHHCCCC----CCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCC--HHHHHHHHHHH
T ss_conf 8-98268615889998999999998718983----10459999999995898379999999984484--35999999998
Q ss_pred HHHCC-----CCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
Q ss_conf 10000-----1797311211122302699924468998463178999732867799998743988776554110157899
Q 003513 293 RSASE-----FAGLGKEVYPLLKFSYDCLPNDAIRSCFLYCCLYPEDFSIDKRDLIDCWMCEGFLEGDKFGTQNQGYYIV 367 (814)
Q Consensus 293 ~~~~~-----~~~~~~~~~~~l~~s~~~L~~~~~k~~~~~~~~~p~~~~i~~~~l~~~w~~~g~i~~~~~~~~~~~~~~l 367 (814)
..... .......+..++..||+.|++ +.|.||+++|+||++..++.+.+...|..+ ...+..++
T Consensus 347 ~~~~~~~~~~~~~~~~~l~~~l~~s~~~L~~-~~~~~l~~la~f~~~~~i~~~~l~~l~~~~----------~~~~~~~l 415 (591)
T 1z6t_A 347 NKQFKRIRKSSSYDYEALDEAMSISVEMLRE-DIKDYYTDLSILQKDVKVPTKVLCILWDME----------TEEVEDIL 415 (591)
T ss_dssp SCCCCCSSCCCSSCCHHHHHHHHHHHHTSCT-TTHHHHHHGGGCCTTCCEEHHHHHHHHTCC----------HHHHHHHH
T ss_pred HHHHHHHHHCCCCCHHHHHHHHHHHHHHCCH-HHHHHHHHCCCCCCCCCCCHHHHHHHHCCC----------HHHHHHHH
T ss_conf 8689876511465437899999999986899-999999974556799850899999996658----------89999999
Q ss_pred HHHHHHCCCCCCC---CCCEEEHHHHHHHHHHHH
Q ss_conf 9999811322125---861443178887799988
Q 003513 368 GTLVHACLLEEVE---DDQVKMHDVVRDMALWIT 398 (814)
Q Consensus 368 ~~L~~~~li~~~~---~~~~~mH~li~~~~~~~~ 398 (814)
..|++++|+.... ..+|+||++++++++...
T Consensus 416 ~~L~~~~Ll~~~~~~~~~~~~~H~lv~~~~~~~~ 449 (591)
T 1z6t_A 416 QEFVNKSLLFCDRNGKSFRYYLHDLQVDFLTEKN 449 (591)
T ss_dssp HHHHHTTSSEEEEETTEEEEECCHHHHHHHHHHT
T ss_pred HHHHHCCCEEEECCCCCCEEEECHHHHHHHHHHH
T ss_conf 9998595868854898567997689999998653
No 5
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=1.00 E-value=1 Score=223.11 Aligned_cols=334 Identities=14% Similarity=0.120 Sum_probs=221.6
Q ss_pred CCCCCCCCCCCCCCCEEEEECCCCCCCC------------------CCC-CC--CCCCCCEEECCCCCCCCCCCHHHCCC
Q ss_conf 9853489775575207999821598767------------------999-99--99962289811577744350011269
Q 003513 414 SGLTKAPADVRGWEMVRRLSLMKNSIEN------------------LPT-VP--TCPHLLTLFLNRNPLRTITGGFFQSM 472 (814)
Q Consensus 414 ~~~~~~p~~~~~~~~l~~L~l~~~~~~~------------------l~~-~~--~~~~L~~L~l~~~~~~~~~~~~~~~l 472 (814)
+.+..+|..+..+++|+.|++++|.+.. +|. +. .+++|+.|++++|.+.+..|..|.++
T Consensus 435 N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L 514 (876)
T 4ecn_A 435 NRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDL 514 (876)
T ss_dssp CEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGC
T ss_pred CCCCCHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEECCCCCCCCCCHHHHHCC
T ss_conf 76152118875699987897968867887465322332222224458744402559997789871898875273877379
Q ss_pred CCCCEEECCCCCCCC--CCCCCCCCCC-------CCCEEEECCCCCCCCCH--HHHCCCCCCEECCCCCCCCCEECCCCC
Q ss_conf 864499835885565--2470123645-------56789703898843472--132278785631335436422071102
Q 003513 473 SCLTVLKMSDNIMLR--QLPMGISKLV-------SLQLLDISNTSVTELPE--DLKALVNLKCLNLVWAKELVVVPQQLL 541 (814)
Q Consensus 473 ~~L~~L~L~~~~~~~--~lp~~~~~l~-------~L~~L~l~~~~l~~lp~--~~~~l~~L~~L~l~~~~~~~~~p~~~~ 541 (814)
++|++|++++|..++ .+|..+..+. +|++|++++|.++.+|. .+..+++|+.|++++|... .+| . +
T Consensus 515 ~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~-~ 591 (876)
T 4ecn_A 515 PELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLEEFPASASLQKMVKLGLLDCVHNKVR-HLE-A-F 591 (876)
T ss_dssp SSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCCBCCCHHHHTTCTTCCEEECTTSCCC-BCC-C-C
T ss_pred CCCCEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCHHHHHCCCCCCEEECCCCCCC-CCH-H-H
T ss_conf 998999896898765664617787523301556883199822894776187235515898898989799825-621-2-2
Q ss_pred CCCCCCCEEECCCCCCCCCHHHHCHHHHHCCCCC-CCEEEEEECCHHHHHHHHCCCCCCCCCEEEEECCCCCCC------
Q ss_conf 8885564641012576532012311999819999-418999932725589875012102544023523468878------
Q 003513 542 SNFSRLRVLRMFATGFLLSSWHENVAEELLGLKY-LEVLEISFRSFEAYQTFLSSQKLRSCTHALLLHRFDREE------ 614 (814)
Q Consensus 542 ~~l~~L~~L~l~~~~~~~~~~~~~~~~~l~~l~~-L~~L~l~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~------ 614 (814)
..+++|+.|++.+|.+ . .++..+..+++ |+.|+++.|.+..++....... ...++.+.++++....
T Consensus 592 ~~L~~L~~L~Ls~N~l-----~-~lp~~l~~l~~~L~~L~Ls~N~L~~lp~~~~~~~-~~~L~~L~Ls~N~l~g~ip~l~ 664 (876)
T 4ecn_A 592 GTNVKLTDLKLDYNQI-----E-EIPEDFCAFTDQVEGLGFSHNKLKYIPNIFNAKS-VYVMGSVDFSYNKIGSEGRNIS 664 (876)
T ss_dssp CTTSEESEEECCSSCC-----S-CCCTTSCEECTTCCEEECCSSCCCSCCSCCCTTC-SSCEEEEECCSSCTTTTSSSCS
T ss_pred CCCCCCEEEECCCCCC-----C-CCHHHHHHCCCCCCEEECCCCCCCCCCHHHHCCC-CCCCCEEECCCCCCCCCCCCCH
T ss_conf 4798500798718712-----5-0358775251149899984997874764452255-6777889770884788643200
Q ss_pred ----------------------CCCCCCCCCCCCCCEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCC
Q ss_conf ----------------------3343684577898689843689751378523455455677423687458966348566
Q 003513 615 ----------------------SIDVADLADLEQLNTLDFYGCGCIKGLKIDCNDMVQKSRQPYVFRSLEKVTVRFCRNL 672 (814)
Q Consensus 615 ----------------------~~~~~~l~~l~~L~~L~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~L~~L~L~~c~~l 672 (814)
.++...+..+++|+.|++++|.. ..++...... ..+....+++|+.|+|++| .+
T Consensus 665 ~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L-~~ip~~~~~~--~~~~l~nl~~L~~L~Ls~N-~L 740 (876)
T 4ecn_A 665 CSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLM-TSIPENSLKP--KDGNYKNTYLLTTIDLRFN-KL 740 (876)
T ss_dssp SCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCC-SCCCTTSSSC--TTSCCTTGGGCCEEECCSS-CC
T ss_pred HHHCCCCCCCCCEEECCCCCCCCCCHHHHCCCCCCCEEECCCCCC-CCCCHHHHCC--CCCCCCCCCCCCEEECCCC-CC
T ss_conf 000013579768898319968865978871389889998989968-8549678455--5334321487158988899-78
Q ss_pred CCCCC-CC--CCCCCCEEEEECCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCC------CCCCCCCCCCCCCCC
Q ss_conf 56500-00--4999757989348003898505988886876665788777744640356------434542368988899
Q 003513 673 RHLTF-LV--FAPNLKSISVRYCDDMEEIISAGEFDDIPEMTGIINSPFAKLQRLELWG------LVRLKSIYWKPLPLP 743 (814)
Q Consensus 673 ~~l~~-l~--~l~~L~~L~l~~c~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~L~~------~~~l~~l~~~~~~~~ 743 (814)
+.++. +. .+++|+.|++++| .++.++ .....+++|+.|.|.+ +.....+|.....++
T Consensus 741 ~~lp~~l~~~~l~~L~~L~Ls~N-~L~~lp-------------~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~ 806 (876)
T 4ecn_A 741 TSLSDDFRATTLPYLSNMDVSYN-CFSSFP-------------TQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCP 806 (876)
T ss_dssp CCCCGGGSTTTCTTCCEEECCSS-CCSSCC-------------CGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCS
T ss_pred CCCHHHHHHCCCCCCCEEEECCC-CCCCCC-------------HHHHCCCCCCEEECCCCCCCCCCCCCCCCHHHHHCCC
T ss_conf 66527762442798698990899-787610-------------5661599988998879977665632444868883699
Q ss_pred CCCEEEEECCCCCCCCCCCCCCCCCCCEEEEECH
Q ss_conf 9548988079999998999999998535997005
Q 003513 744 RLKVLQVWGCDSLKKLPLDSNSANGRRILIRGVE 777 (814)
Q Consensus 744 ~L~~L~i~~C~~L~~lp~~~~~~~~~~~~i~~~~ 777 (814)
+|+.|++++| ++..+|.... .+++.+.+++|+
T Consensus 807 ~L~~L~Ls~N-~L~~Ip~~l~-~~L~~LdLs~N~ 838 (876)
T 4ecn_A 807 SLIQLQIGSN-DIRKVDEKLT-PQLYILDIADNP 838 (876)
T ss_dssp SCCEEECCSS-CCCBCCSCCC-SSSCEEECCSCT
T ss_pred CCCEEECCCC-CCCCCCHHHC-CCCCEEECCCCC
T ss_conf 8788988799-7874087662-877889997998
No 6
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=1.00 E-value=1 Score=219.46 Aligned_cols=329 Identities=13% Similarity=0.181 Sum_probs=180.8
Q ss_pred CCCCCC--CCCCEEEEECCCCCCC-CCC-CCCCCCCCCEEECCCCC-CCC-CCCHHHCCC------CCCCEEECCCCCCC
Q ss_conf 897755--7520799982159876-799-99999962289811577-744-350011269------86449983588556
Q 003513 419 APADVR--GWEMVRRLSLMKNSIE-NLP-TVPTCPHLLTLFLNRNP-LRT-ITGGFFQSM------SCLTVLKMSDNIML 486 (814)
Q Consensus 419 ~p~~~~--~~~~l~~L~l~~~~~~-~l~-~~~~~~~L~~L~l~~~~-~~~-~~~~~~~~l------~~L~~L~L~~~~~~ 486 (814)
+|..+. .+++++.|++++|.+. .+| .+..+++|++|++++|. +++ ..|..+..+ ++|++|++++| .+
T Consensus 239 ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n-~l 317 (636)
T 4eco_A 239 KTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYN-NL 317 (636)
T ss_dssp TTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSS-CC
T ss_pred CCHHHHHCCCCCCCEEEECCCCCCCCCHHHHHCCCCCCEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEECCCC-CC
T ss_conf 86322004468788898048857762838883499978897847988766533578875430465788888989799-37
Q ss_pred CCCCC--CCCCCCCCCEEEECCCCCC-CCCHHHHCCCCCCEECCCCCCCCCEECCCCCCCCCC-CCEEECCCCCCCCCHH
Q ss_conf 52470--1236455678970389884-347213227878563133543642207110288855-6464101257653201
Q 003513 487 RQLPM--GISKLVSLQLLDISNTSVT-ELPEDLKALVNLKCLNLVWAKELVVVPQQLLSNFSR-LRVLRMFATGFLLSSW 562 (814)
Q Consensus 487 ~~lp~--~~~~l~~L~~L~l~~~~l~-~lp~~~~~l~~L~~L~l~~~~~~~~~p~~~~~~l~~-L~~L~l~~~~~~~~~~ 562 (814)
+.+|. .+..+++|++|++++|.++ .+| .+..+++|+.|++++|.. ..+|.. +..+++ |+.|++++|.+
T Consensus 318 ~~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l-~~lp~~-l~~l~~~L~~L~Ls~N~l----- 389 (636)
T 4eco_A 318 KTFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQI-TEIPAN-FCGFTEQVENLSFAHNKL----- 389 (636)
T ss_dssp SSCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEE-EECCTT-SEEECTTCCEEECCSSCC-----
T ss_pred CCCCCHHHHCCCCCCCEEECCCCCCCCCHH-HHCCCCCCCEEECCCCCC-CCCCHH-HHHHCCCCCEEECCCCCC-----
T ss_conf 766765554257888989690880705166-647889889898989940-303375-651023686898529827-----
Q ss_pred HHCHHHHHCCCC--CCCEEEEEECCHHHHHH-HHC----CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCC
Q ss_conf 231199981999--94189999327255898-750----12102544023523468878334368457789868984368
Q 003513 563 HENVAEELLGLK--YLEVLEISFRSFEAYQT-FLS----SQKLRSCTHALLLHRFDREESIDVADLADLEQLNTLDFYGC 635 (814)
Q Consensus 563 ~~~~~~~l~~l~--~L~~L~l~~~~~~~~~~-~~~----~~~~~~~l~~l~l~~~~~~~~~~~~~l~~l~~L~~L~l~~~ 635 (814)
. .++..+..+. +|+.|+++.|.+....+ .+. ..-....++.+.++++.-. .++...+..+++|+.|++++|
T Consensus 390 ~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~~~l~~L~~L~Ls~N 467 (636)
T 4eco_A 390 K-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQIS-KFPKELFSTGSPLSSINLMGN 467 (636)
T ss_dssp S-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCC-SCCTHHHHTTCCCSEEECCSS
T ss_pred C-CCCHHHHHCCCCCCCEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCEEECCCCCCC-CCCHHHHCCCCCCCEEECCCC
T ss_conf 5-44665533345766889774885788652442002201125898888977279668-678788715898898989799
Q ss_pred CCCCEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCC-CCC--CCCCCCEEEEECCHHHHHHHCCCCCCCCCCCCC
Q ss_conf 97513785234554556774236874589663485665650-000--499975798934800389850598888687666
Q 003513 636 GCIKGLKIDCNDMVQKSRQPYVFRSLEKVTVRFCRNLRHLT-FLV--FAPNLKSISVRYCDDMEEIISAGEFDDIPEMTG 712 (814)
Q Consensus 636 ~~l~~l~~~~~~~~~~~~~~~~~~~L~~L~L~~c~~l~~l~-~l~--~l~~L~~L~l~~c~~l~~~~~~~~~~~~~~~~~ 712 (814)
... .++...... .......+++|+.|++++|. ++.++ .+. .+++|+.|++++|. ++.++
T Consensus 468 ~l~-~i~~~~~~~--~~~~~~~l~~L~~L~Ls~N~-l~~lp~~~~~~~l~~L~~L~Ls~N~-l~~ip------------- 529 (636)
T 4eco_A 468 MLT-EIPKNSLKD--ENENFKNTYLLTSIDLRFNK-LTKLSDDFRATTLPYLVGIDLSYNS-FSKFP------------- 529 (636)
T ss_dssp CCS-BCCSSSSEE--TTEECTTGGGCCEEECCSSC-CCBCCGGGSTTTCTTCCEEECCSSC-CSSCC-------------
T ss_pred CCC-CCCHHHHCC--CCCCCCCCCCCCEEECCCCC-CCCCCHHHHHCCCCCCCEEECCCCC-CCCCC-------------
T ss_conf 788-739788404--40012214773389896993-8816854534458876989898998-87768-------------
Q ss_pred CCCCCCCCCCEECCCC------CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEECHH
Q ss_conf 5788777744640356------43454236898889995489880799999989999999985359970052
Q 003513 713 IINSPFAKLQRLELWG------LVRLKSIYWKPLPLPRLKVLQVWGCDSLKKLPLDSNSANGRRILIRGVED 778 (814)
Q Consensus 713 ~~~~~~~~L~~L~L~~------~~~l~~l~~~~~~~~~L~~L~i~~C~~L~~lp~~~~~~~~~~~~i~~~~~ 778 (814)
.....+++|+.|.+.+ +.....+|.....+++|+.|++++| ++..+|.... .+++.+.+++++-
T Consensus 530 ~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N-~l~~ip~~~~-~~L~~L~Ls~N~l 599 (636)
T 4eco_A 530 TQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSN-DIRKVNEKIT-PNISVLDIKDNPN 599 (636)
T ss_dssp CGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSS-CCCBCCSCCC-TTCCEEECCSCTT
T ss_pred HHHHCCCCCCEEECCCCCCCCCCCCCCCCHHHHHCCCCCCEEECCCC-CCCCCCHHHH-CCCCEEECCCCCC
T ss_conf 23530888787889888665667312127377856998788989899-4770597683-8678998769987
No 7
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=1.00 E-value=1 Score=215.11 Aligned_cols=227 Identities=22% Similarity=0.164 Sum_probs=91.7
Q ss_pred CCCCEEECCCCCCCCCCCHHHCCCCCCCEEECCCCCCCCCCCCC-CCCCCCCCEEEECCCCCC-CCCHHHHCC-------
Q ss_conf 96228981157774435001126986449983588556524701-236455678970389884-347213227-------
Q 003513 449 PHLLTLFLNRNPLRTITGGFFQSMSCLTVLKMSDNIMLRQLPMG-ISKLVSLQLLDISNTSVT-ELPEDLKAL------- 519 (814)
Q Consensus 449 ~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~L~~~~~~~~lp~~-~~~l~~L~~L~l~~~~l~-~lp~~~~~l------- 519 (814)
++|++|++++|.+.+..+..|.++++|++|++++|...+.+|.. +..+++|++|++++|.++ .+|..+..+
T Consensus 294 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L 373 (768)
T 3rgz_A 294 DTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTL 373 (768)
T ss_dssp TTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEE
T ss_pred CCCCEEECCCCCCCCCCCHHHHCCCCCCEEECCCCCCCCCCCHHHHHCCCCCCEEECCCCCCCCCCCHHHHHHHCCCCEE
T ss_conf 86889989689677842367755877667789788525737978872488887884847843762309898632277199
Q ss_pred --------------------CCCCEECCCCCCCCCEECCCCCCCCCCCCEEECCCCCCCCCHHHHCHHHHHCCCCCCCEE
Q ss_conf --------------------878563133543642207110288855646410125765320123119998199994189
Q 003513 520 --------------------VNLKCLNLVWAKELVVVPQQLLSNFSRLRVLRMFATGFLLSSWHENVAEELLGLKYLEVL 579 (814)
Q Consensus 520 --------------------~~L~~L~l~~~~~~~~~p~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~l~~l~~L~~L 579 (814)
++|+.|++++|...+.+|.. +..+++|+.|++.+|.+ .+..+..+..+++|+.|
T Consensus 374 ~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~-l~~l~~L~~L~Ls~N~l-----~~~~p~~l~~l~~L~~L 447 (768)
T 3rgz_A 374 DLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPT-LSNCSELVSLHLSFNYL-----SGTIPSSLGSLSKLRDL 447 (768)
T ss_dssp ECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGG-GGGCTTCCEEECCSSEE-----ESCCCGGGGGCTTCCEE
T ss_pred ECCCCCCCCCCCHHHHHCCCCCCCEEECCCCCCCCCCCHH-HHCCCCCCEEECCCCCC-----CCCCCHHHHCCCCCCEE
T ss_conf 8627874787676665332477618989778465424877-75689879898958846-----68546777449988989
Q ss_pred EEEECCHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEECCCCCCCCCCCCCCCC
Q ss_conf 99932725589875012102544023523468878334368457789868984368975137852345545567742368
Q 003513 580 EISFRSFEAYQTFLSSQKLRSCTHALLLHRFDREESIDVADLADLEQLNTLDFYGCGCIKGLKIDCNDMVQKSRQPYVFR 659 (814)
Q Consensus 580 ~l~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~l~~l~~~~~~~~~~~~~~~~~~ 659 (814)
+++.|.+.... .........++.+.++++......+ ..+..+++|+.|++++|..... .+.+. ..++
T Consensus 448 ~L~~n~l~~~~--p~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~L~~N~l~~~-~p~~~---------~~l~ 514 (768)
T 3rgz_A 448 KLWLNMLEGEI--PQELMYVKTLETLILDFNDLTGEIP-SGLSNCTNLNWISLSNNRLTGE-IPKWI---------GRLE 514 (768)
T ss_dssp ECCSSCCCSCC--CGGGGGCTTCCEEECCSSCCCSCCC-GGGGGCTTCCEEECCSSCCCSC-CCGGG---------GGCT
T ss_pred ECCCCCCCCCC--CHHHCCCCCCEEEEECCCCCCCCCC-HHHHCCCCCCEEECCCCCCCCC-CCHHH---------HCCC
T ss_conf 89788154718--9788287773299901995137588-7881699899897539951896-87688---------5689
Q ss_pred CCCEEEEECCCCCCCCC-CCCCCCCCCEEEEECCHH
Q ss_conf 74589663485665650-000499975798934800
Q 003513 660 SLEKVTVRFCRNLRHLT-FLVFAPNLKSISVRYCDD 694 (814)
Q Consensus 660 ~L~~L~L~~c~~l~~l~-~l~~l~~L~~L~l~~c~~ 694 (814)
+|+.|++++|.....+| .+..+++|+.|++++|..
T Consensus 515 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 550 (768)
T 3rgz_A 515 NLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLF 550 (768)
T ss_dssp TCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEE
T ss_pred CCCEEECCCCCCCCCCCHHHCCCCCCCEEECCCCCC
T ss_conf 999898978943374887770889899898988846
No 8
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=1.00 E-value=1 Score=213.24 Aligned_cols=286 Identities=15% Similarity=0.038 Sum_probs=133.1
Q ss_pred CCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCC-CCCHHHHCCCCCCEECCCCCCCCCEECCCCCCCCCCCCEE
Q ss_conf 986449983588556524701236455678970389884-3472132278785631335436422071102888556464
Q 003513 472 MSCLTVLKMSDNIMLRQLPMGISKLVSLQLLDISNTSVT-ELPEDLKALVNLKCLNLVWAKELVVVPQQLLSNFSRLRVL 550 (814)
Q Consensus 472 l~~L~~L~L~~~~~~~~lp~~~~~l~~L~~L~l~~~~l~-~lp~~~~~l~~L~~L~l~~~~~~~~~p~~~~~~l~~L~~L 550 (814)
+++|++|++++|...+.+|..+..+++|++|++++|.++ .+|..+..+++|+.|++++|...+.+|.. +..+++|+.|
T Consensus 393 ~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~-~~~l~~L~~L 471 (768)
T 3rgz_A 393 KNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQE-LMYVKTLETL 471 (768)
T ss_dssp TCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGG-GGGCTTCCEE
T ss_pred CCCCCEEECCCCCCCCCCCHHHHCCCCCCEEECCCCCCCCCCCHHHHCCCCCCEEECCCCCCCCCCCHH-HCCCCCCEEE
T ss_conf 477618989778465424877756898798989588466854677744998898989788154718978-8287773299
Q ss_pred ECCCCCCCCCHHHHCHHHHHCCCCCCCEEEEEECCHHH-HHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCE
Q ss_conf 10125765320123119998199994189999327255-89875012102544023523468878334368457789868
Q 003513 551 RMFATGFLLSSWHENVAEELLGLKYLEVLEISFRSFEA-YQTFLSSQKLRSCTHALLLHRFDREESIDVADLADLEQLNT 629 (814)
Q Consensus 551 ~l~~~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~-~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~l~~l~~L~~ 629 (814)
++.+|.+ .+..+..+..+++|+.|+++.|.+.. .+.. ......++.+.+++|.....++ ..+..+++|+.
T Consensus 472 ~L~~N~l-----~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~---~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~ 542 (768)
T 3rgz_A 472 ILDFNDL-----TGEIPSGLSNCTNLNWISLSNNRLTGEIPKW---IGRLENLAILKLSNNSFSGNIP-AELGDCRSLIW 542 (768)
T ss_dssp ECCSSCC-----CSCCCGGGGGCTTCCEEECCSSCCCSCCCGG---GGGCTTCCEEECCSSCCEEECC-GGGGGCTTCCE
T ss_pred EECCCCC-----CCCCCHHHHCCCCCCEEECCCCCCCCCCCHH---HHCCCCCCEEECCCCCCCCCCC-HHHCCCCCCCE
T ss_conf 9019951-----3758878816998998975399518968768---8568999989897894337488-77708898998
Q ss_pred EEECCCCCCCEEEECCCCC------------------------------------------------------------C
Q ss_conf 9843689751378523455------------------------------------------------------------4
Q 003513 630 LDFYGCGCIKGLKIDCNDM------------------------------------------------------------V 649 (814)
Q Consensus 630 L~l~~~~~l~~l~~~~~~~------------------------------------------------------------~ 649 (814)
|++++|.....++..+... +
T Consensus 543 L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g 622 (768)
T 3rgz_A 543 LDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGG 622 (768)
T ss_dssp EECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEE
T ss_pred EECCCCCCCCCCCHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCEECC
T ss_conf 98988846882795786042122320134542111134443222233222100135563232002321100113310046
Q ss_pred CCCCCCCCCCCCCEEEEECCCCCCCCC-CCCCCCCCCEEEEECCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCC
Q ss_conf 556774236874589663485665650-0004999757989348003898505988886876665788777744640356
Q 003513 650 QKSRQPYVFRSLEKVTVRFCRNLRHLT-FLVFAPNLKSISVRYCDDMEEIISAGEFDDIPEMTGIINSPFAKLQRLELWG 728 (814)
Q Consensus 650 ~~~~~~~~~~~L~~L~L~~c~~l~~l~-~l~~l~~L~~L~l~~c~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~L~~ 728 (814)
..|.....+++|+.|++++|.....+| .++.+++|+.|+++++.....++ .....+++|+.|+|++
T Consensus 623 ~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip-------------~~l~~L~~L~~LdLs~ 689 (768)
T 3rgz_A 623 HTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIP-------------DEVGDLRGLNILDLSS 689 (768)
T ss_dssp ECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCC-------------GGGGGCTTCCEEECCS
T ss_pred CCCHHHHCCCCCCEEECCCCCCCCCCCHHHHCCCCCCEEECCCCCCCCCCC-------------HHHHCCCCCCEEECCC
T ss_conf 274334033566579785880155587788414157878486880388789-------------6784777899898978
Q ss_pred CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEECHHHH
Q ss_conf 4345423689888999548988079999998999999998535997005210
Q 003513 729 LVRLKSIYWKPLPLPRLKVLQVWGCDSLKKLPLDSNSANGRRILIRGVEDWW 780 (814)
Q Consensus 729 ~~~l~~l~~~~~~~~~L~~L~i~~C~~L~~lp~~~~~~~~~~~~i~~~~~~~ 780 (814)
+.--..+|.....+++|+.|++++|.---.+|..+...+.....+.|++.++
T Consensus 690 N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lc 741 (768)
T 3rgz_A 690 NKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLC 741 (768)
T ss_dssp SCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEE
T ss_pred CCCCCCCCHHHHCCCCCCEEECCCCCCCCCCCCCHHHCCCCHHHHCCCCHHC
T ss_conf 8023868867757887897879688155608996010248977756983210
No 9
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=1.00 E-value=1 Score=208.71 Aligned_cols=145 Identities=23% Similarity=0.325 Sum_probs=68.5
Q ss_pred EECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCC--CCCCCCCCCEEECCCCCCCCCCCHHHCCCCCCCEEECCCCCCCC
Q ss_conf 9719985348977557520799982159876799--99999962289811577744350011269864499835885565
Q 003513 410 VYAGSGLTKAPADVRGWEMVRRLSLMKNSIENLP--TVPTCPHLLTLFLNRNPLRTITGGFFQSMSCLTVLKMSDNIMLR 487 (814)
Q Consensus 410 ~~~~~~~~~~p~~~~~~~~l~~L~l~~~~~~~l~--~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~L~~~~~~~ 487 (814)
...++.+..+|..+. .+++.|++++|.+..++ .+..+++|++|++++|.+...++..|.++++|++|++++| .+.
T Consensus 11 ~~~~~~l~~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n-~l~ 87 (549)
T 2z81_A 11 DGRSRSFTSIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDN-HLS 87 (549)
T ss_dssp ECTTSCCSSCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTS-CCC
T ss_pred ECCCCCCCCCCCCCC--CCCCEEECCCCCCCCCCHHHHHCCCCCCEEECCCCCCCCCCHHHCCCCCCCCEEECCCC-CCC
T ss_conf 789884100455579--87548978588567328045645876668989799767527545213566888989898-057
Q ss_pred CCCC-CCCCCCCCCEEEECCCCCCC--CCHHHHCCCCCCEECCCCCCCCCEECCCCCCCCCCCCEEECCCCCC
Q ss_conf 2470-12364556789703898843--4721322787856313354364220711028885564641012576
Q 003513 488 QLPM-GISKLVSLQLLDISNTSVTE--LPEDLKALVNLKCLNLVWAKELVVVPQQLLSNFSRLRVLRMFATGF 557 (814)
Q Consensus 488 ~lp~-~~~~l~~L~~L~l~~~~l~~--lp~~~~~l~~L~~L~l~~~~~~~~~p~~~~~~l~~L~~L~l~~~~~ 557 (814)
.++. .++.+++|++|++++|.++. .|..+..+++|++|++++|...+.+|...+.++++|+.|++.+|.+
T Consensus 88 ~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l 160 (549)
T 2z81_A 88 SLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSL 160 (549)
T ss_dssp SCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTC
T ss_pred CCCHHHHCCCCCCCEEECCCCCCCCCCHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHCCCCCCEEECCCCCC
T ss_conf 5677773557777488798983564024345430577658977888221103876652345568665467846
No 10
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=1.00 E-value=1 Score=206.03 Aligned_cols=62 Identities=11% Similarity=-0.137 Sum_probs=31.8
Q ss_pred CCCCCCCCEECCCCCCCCCCC-CCCCCCCCCCCEEEEECCCCCCCCCCCCCC--CCCCCEEEEECHH
Q ss_conf 887777446403564345423-689888999548988079999998999999--9985359970052
Q 003513 715 NSPFAKLQRLELWGLVRLKSI-YWKPLPLPRLKVLQVWGCDSLKKLPLDSNS--ANGRRILIRGVED 778 (814)
Q Consensus 715 ~~~~~~L~~L~L~~~~~l~~l-~~~~~~~~~L~~L~i~~C~~L~~lp~~~~~--~~~~~~~i~~~~~ 778 (814)
...+++|+.|+++++. +..+ |.....+++|+.|++++| +++.+|..... .+++.+.+.+++-
T Consensus 493 ~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l~~L~~L~l~~N-~l~~~p~~~~~l~~~L~~l~l~~N~~ 557 (606)
T 3vq2_A 493 FDTLHRLQLLNMSHNN-LLFLDSSHYNQLYSLSTLDCSFN-RIETSKGILQHFPKSLAFFNLTNNSV 557 (606)
T ss_dssp TTTCTTCCEEECCSSC-CSCEEGGGTTTCTTCCEEECTTS-CCCCEESCGGGSCTTCCEEECCSCCC
T ss_pred HCCCCCCCEEECCCCC-CCCCCHHHCCCCCCCCEEECCCC-CCCCCCHHHHHHCCCCCEEECCCCCC
T ss_conf 1546468989898995-78748777068876898889898-37666876752102174887628986
Done!