BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003522
(813 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|296086085|emb|CBI31526.3| unnamed protein product [Vitis vinifera]
Length = 1193
Score = 1221 bits (3158), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 608/715 (85%), Positives = 645/715 (90%), Gaps = 23/715 (3%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
++ICSLLHQRYKDFSP LI GLLKVFFPGKSG++LD DRNLKAMKKRSTLKLLLELYF+G
Sbjct: 117 VQICSLLHQRYKDFSPSLIQGLLKVFFPGKSGDELDLDRNLKAMKKRSTLKLLLELYFVG 176
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQGRIFLGLPLSGPGQEIYEEF 180
++EDS IFINIIKDLTSIEHLKDRDTTQTNL+LLASFARQGRIFLG PLSG QEI+EEF
Sbjct: 177 VVEDSGIFINIIKDLTSIEHLKDRDTTQTNLSLLASFARQGRIFLGFPLSG--QEIHEEF 234
Query: 181 FKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSS 240
FKGLNITAD KKIF+KAFHTYY+A ELLQAEHTSLRQME+ENAKILNAKGELS+EN SS
Sbjct: 235 FKGLNITADHKKIFRKAFHTYYDAAAELLQAEHTSLRQMEHENAKILNAKGELSDENVSS 294
Query: 241 YEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASGKDSSVPEPVWD 300
YEKLRKSYDHLYR VSSLAEALDMQPPVMPED HTTRVTSGED S + K+SS E VWD
Sbjct: 295 YEKLRKSYDHLYRGVSSLAEALDMQPPVMPEDGHTTRVTSGEDVSSPAAKESSALEAVWD 354
Query: 301 DEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTAE 360
DE+TRAFYECLPDLRAFVPAVLLGEAE K NE S K EQPTD A E DQ Q QD AE
Sbjct: 355 DEDTRAFYECLPDLRAFVPAVLLGEAEPKVNEQSAKTQEQPTDLAPEADQSQSVNQDAAE 414
Query: 361 VSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEK 420
+S D + EG+S KGKDKEEK+KEK+KDPDKEKGKE+
Sbjct: 415 ISVDSCSPREGRS---------------------NEKGKDKEEKEKEKSKDPDKEKGKER 453
Query: 421 DTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRAL 480
D +RK E EKEKLKG+EGTNLD LLQRLPGCVSRDLIDQLTV+FCYLNSKSNRKRLVRAL
Sbjct: 454 DADRKGENEKEKLKGLEGTNLDGLLQRLPGCVSRDLIDQLTVDFCYLNSKSNRKRLVRAL 513
Query: 481 FNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIR 540
FNVPRTSLELLPYYSRMVATLSTCMKDVSSML+Q+LEEEFNFLINKKDQMNIETKIRNIR
Sbjct: 514 FNVPRTSLELLPYYSRMVATLSTCMKDVSSMLLQLLEEEFNFLINKKDQMNIETKIRNIR 573
Query: 541 FIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANML 600
F+GELCKF+IAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPET++RMANML
Sbjct: 574 FLGELCKFRIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETTVRMANML 633
Query: 601 EILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSI 660
EILMRLKNVKNLDPRH TLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSI
Sbjct: 634 EILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSI 693
Query: 661 EHVLRQLRKLPWSDCESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVL 720
EHVLRQLRKLPWS+CE YLLKCFMKVH+GKYGQIHLIASLT+GLSRYHD+FAV+VVDEVL
Sbjct: 694 EHVLRQLRKLPWSECEPYLLKCFMKVHRGKYGQIHLIASLTSGLSRYHDDFAVSVVDEVL 753
Query: 721 EEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHGTAE 775
EEIRLGLELNDYGMQQRR+AHMRFLGELYNYEHVDSSVIFDTLYLIL FGH TAE
Sbjct: 754 EEIRLGLELNDYGMQQRRIAHMRFLGELYNYEHVDSSVIFDTLYLILAFGHETAE 808
>gi|359486551|ref|XP_002275646.2| PREDICTED: regulator of nonsense transcripts 2-like [Vitis
vinifera]
Length = 1222
Score = 1221 bits (3158), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 608/715 (85%), Positives = 645/715 (90%), Gaps = 23/715 (3%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
++ICSLLHQRYKDFSP LI GLLKVFFPGKSG++LD DRNLKAMKKRSTLKLLLELYF+G
Sbjct: 146 VQICSLLHQRYKDFSPSLIQGLLKVFFPGKSGDELDLDRNLKAMKKRSTLKLLLELYFVG 205
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQGRIFLGLPLSGPGQEIYEEF 180
++EDS IFINIIKDLTSIEHLKDRDTTQTNL+LLASFARQGRIFLG PLSG QEI+EEF
Sbjct: 206 VVEDSGIFINIIKDLTSIEHLKDRDTTQTNLSLLASFARQGRIFLGFPLSG--QEIHEEF 263
Query: 181 FKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSS 240
FKGLNITAD KKIF+KAFHTYY+A ELLQAEHTSLRQME+ENAKILNAKGELS+EN SS
Sbjct: 264 FKGLNITADHKKIFRKAFHTYYDAAAELLQAEHTSLRQMEHENAKILNAKGELSDENVSS 323
Query: 241 YEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASGKDSSVPEPVWD 300
YEKLRKSYDHLYR VSSLAEALDMQPPVMPED HTTRVTSGED S + K+SS E VWD
Sbjct: 324 YEKLRKSYDHLYRGVSSLAEALDMQPPVMPEDGHTTRVTSGEDVSSPAAKESSALEAVWD 383
Query: 301 DEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTAE 360
DE+TRAFYECLPDLRAFVPAVLLGEAE K NE S K EQPTD A E DQ Q QD AE
Sbjct: 384 DEDTRAFYECLPDLRAFVPAVLLGEAEPKVNEQSAKTQEQPTDLAPEADQSQSVNQDAAE 443
Query: 361 VSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEK 420
+S D + EG+S KGKDKEEK+KEK+KDPDKEKGKE+
Sbjct: 444 ISVDSCSPREGRS---------------------NEKGKDKEEKEKEKSKDPDKEKGKER 482
Query: 421 DTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRAL 480
D +RK E EKEKLKG+EGTNLD LLQRLPGCVSRDLIDQLTV+FCYLNSKSNRKRLVRAL
Sbjct: 483 DADRKGENEKEKLKGLEGTNLDGLLQRLPGCVSRDLIDQLTVDFCYLNSKSNRKRLVRAL 542
Query: 481 FNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIR 540
FNVPRTSLELLPYYSRMVATLSTCMKDVSSML+Q+LEEEFNFLINKKDQMNIETKIRNIR
Sbjct: 543 FNVPRTSLELLPYYSRMVATLSTCMKDVSSMLLQLLEEEFNFLINKKDQMNIETKIRNIR 602
Query: 541 FIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANML 600
F+GELCKF+IAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPET++RMANML
Sbjct: 603 FLGELCKFRIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETTVRMANML 662
Query: 601 EILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSI 660
EILMRLKNVKNLDPRH TLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSI
Sbjct: 663 EILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSI 722
Query: 661 EHVLRQLRKLPWSDCESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVL 720
EHVLRQLRKLPWS+CE YLLKCFMKVH+GKYGQIHLIASLT+GLSRYHD+FAV+VVDEVL
Sbjct: 723 EHVLRQLRKLPWSECEPYLLKCFMKVHRGKYGQIHLIASLTSGLSRYHDDFAVSVVDEVL 782
Query: 721 EEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHGTAE 775
EEIRLGLELNDYGMQQRR+AHMRFLGELYNYEHVDSSVIFDTLYLIL FGH TAE
Sbjct: 783 EEIRLGLELNDYGMQQRRIAHMRFLGELYNYEHVDSSVIFDTLYLILAFGHETAE 837
>gi|255565870|ref|XP_002523924.1| Regulator of nonsense transcripts, putative [Ricinus communis]
gi|223536854|gb|EEF38493.1| Regulator of nonsense transcripts, putative [Ricinus communis]
Length = 824
Score = 1197 bits (3096), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 604/716 (84%), Positives = 647/716 (90%), Gaps = 34/716 (4%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
++ICSLLHQRYKDFSP L+ GLLKVFFPGKSGE+LD DRN KAMKKRSTLKLLLELYF+G
Sbjct: 117 VQICSLLHQRYKDFSPSLVQGLLKVFFPGKSGEELDVDRNSKAMKKRSTLKLLLELYFVG 176
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQGRIFLGLPLSGPGQEIYEEF 180
+IEDSSIFINIIKDLTS+EHLKDRD TQTNLTLLASFARQGR+FLGL LSG QEI+EEF
Sbjct: 177 VIEDSSIFINIIKDLTSVEHLKDRDATQTNLTLLASFARQGRVFLGLSLSG--QEIHEEF 234
Query: 181 FKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSS 240
KGLNIT DQKKIF+KAF+TYY+AV ELLQ+EHTSLRQME+ENAKILNAKGELS+EN +S
Sbjct: 235 VKGLNITTDQKKIFRKAFNTYYDAVSELLQSEHTSLRQMEHENAKILNAKGELSDENVAS 294
Query: 241 YEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDAS-PASGKDSSVPEPVW 299
YEKLRKSYDHLYRNVSSLAEALDMQPPVMPED HTTRVT+GEDAS PA+GKDSSV E +W
Sbjct: 295 YEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDGHTTRVTTGEDASSPATGKDSSVLEALW 354
Query: 300 DDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTA 359
DDE+TRAFYECLPDLRAFVPAVLLGEAE K NE SVK EQP+ P QDTA
Sbjct: 355 DDEDTRAFYECLPDLRAFVPAVLLGEAEPKVNEQSVKTQEQPSQPT----------QDTA 404
Query: 360 EVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKE 419
E SAD G EGKS+EKGKDK+EK+KEKAKDP+KEK K E
Sbjct: 405 ESSADTGTVQEGKSIEKGKDKDEKDKEKAKDPEKEKNK---------------------E 443
Query: 420 KDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRA 479
KD ERK E EK+KLKG+EGT+LDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRK+LVRA
Sbjct: 444 KDAERKGENEKDKLKGLEGTSLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKKLVRA 503
Query: 480 LFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNI 539
LFNVPRTSLELLPYYSRMVATLSTCMKDVSSML+QMLEEEFNFLINKKDQMNIETKIRNI
Sbjct: 504 LFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLLQMLEEEFNFLINKKDQMNIETKIRNI 563
Query: 540 RFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANM 599
RF+GELCKFKIAP GLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPET++RMANM
Sbjct: 564 RFLGELCKFKIAPPGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETTVRMANM 623
Query: 600 LEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSS 659
LEILMRLKNVKNLDPRH TLVENAYYLCKPPERSARVSKVRPPL+QYIRKLLFSDL+KSS
Sbjct: 624 LEILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARVSKVRPPLYQYIRKLLFSDLEKSS 683
Query: 660 IEHVLRQLRKLPWSDCESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEV 719
IE+VLRQLRKLPWS+C++YLLKCFMKVHKGKYGQI+LIASLTAGLSRYHDEFAVAVVDEV
Sbjct: 684 IEYVLRQLRKLPWSECDAYLLKCFMKVHKGKYGQINLIASLTAGLSRYHDEFAVAVVDEV 743
Query: 720 LEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHGTAE 775
LEEIRLGLELNDYGMQQRR+AHMR+LGELYNYE VDSSVIF+TLYLIL FGH T E
Sbjct: 744 LEEIRLGLELNDYGMQQRRIAHMRYLGELYNYELVDSSVIFETLYLILGFGHDTPE 799
>gi|224109654|ref|XP_002315268.1| predicted protein [Populus trichocarpa]
gi|222864308|gb|EEF01439.1| predicted protein [Populus trichocarpa]
Length = 1194
Score = 1197 bits (3096), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 603/716 (84%), Positives = 646/716 (90%), Gaps = 25/716 (3%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
++ICSLLHQRYKDFSP L+ GLLKVFFP KSGEDLD D+N KAMKKRSTLKLLLEL+F+G
Sbjct: 117 VQICSLLHQRYKDFSPSLVQGLLKVFFPVKSGEDLDVDKNSKAMKKRSTLKLLLELFFVG 176
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQGRIFLGLPLSGPGQEIYEEF 180
+ EDSS+FINIIKDLTS EHLKDRDTTQTNLTLLASFARQGR+FLGLPLSG QEI+EEF
Sbjct: 177 VTEDSSVFINIIKDLTSAEHLKDRDTTQTNLTLLASFARQGRVFLGLPLSG--QEIHEEF 234
Query: 181 FKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSS 240
FKGLNIT DQKKIF+KAFH YY+AV ELLQ++H SLRQME+ENAKILNAKGELS+EN SS
Sbjct: 235 FKGLNITTDQKKIFRKAFHAYYDAVAELLQSDHASLRQMEHENAKILNAKGELSDENVSS 294
Query: 241 YEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGED-ASPASGKDSSVPEPVW 299
YEKLRKSYDHLYRNVSSLAEAL MQPPVMPED HTTR+TSGED +SPA+GKDSSV E +W
Sbjct: 295 YEKLRKSYDHLYRNVSSLAEALHMQPPVMPEDGHTTRLTSGEDISSPAAGKDSSVLEALW 354
Query: 300 DDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTA 359
DDE+TRAFYECLPDLRAFVPAVLLGE E KAN+ SVK +Q ++ A E DQGQ + QD A
Sbjct: 355 DDEDTRAFYECLPDLRAFVPAVLLGEVEPKANDHSVKTQDQQSELAPESDQGQ-STQDMA 413
Query: 360 EVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKE 419
EV+A+ G EGKS EKGKDKEEK+KEK KDP+KEKG KE
Sbjct: 414 EVTAESGTLQEGKSTEKGKDKEEKDKEKVKDPEKEKG---------------------KE 452
Query: 420 KDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRA 479
KD ERK E EKEKLK +EGTNLDALLQRLPGCVSRDLIDQLTVEFCY NSKSNRK+LVRA
Sbjct: 453 KDAERKGENEKEKLKSLEGTNLDALLQRLPGCVSRDLIDQLTVEFCYFNSKSNRKKLVRA 512
Query: 480 LFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNI 539
LFNVPRTSLELLPYYSRMVATLSTCMKDVS ML+Q+LEEEFNFLINKKDQMNIETKIRNI
Sbjct: 513 LFNVPRTSLELLPYYSRMVATLSTCMKDVSFMLLQLLEEEFNFLINKKDQMNIETKIRNI 572
Query: 540 RFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANM 599
RFIGELCKF+IAPA VFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPET++RMANM
Sbjct: 573 RFIGELCKFRIAPASTVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETTVRMANM 632
Query: 600 LEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSS 659
LEILMRLKNVKNLDPRH TLVENAYYLCKPPERSARVSKVRPPL+QYIRKLLFSDLDKSS
Sbjct: 633 LEILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARVSKVRPPLYQYIRKLLFSDLDKSS 692
Query: 660 IEHVLRQLRKLPWSDCESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEV 719
IEHVLRQLRKLPWS+CE+YLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAV+VVDEV
Sbjct: 693 IEHVLRQLRKLPWSECEAYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVSVVDEV 752
Query: 720 LEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHGTAE 775
LEEIRLGLELNDYGMQQRR+AHMRFLGELYNYEHVDSSVIF+TL LILVFGH T E
Sbjct: 753 LEEIRLGLELNDYGMQQRRIAHMRFLGELYNYEHVDSSVIFETLNLILVFGHDTPE 808
>gi|449452126|ref|XP_004143811.1| PREDICTED: regulator of nonsense transcripts 2-like [Cucumis
sativus]
Length = 1195
Score = 1191 bits (3082), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 591/716 (82%), Positives = 643/716 (89%), Gaps = 25/716 (3%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
++ICSLLHQRYKDFSPCLI GLLKVFFPGKSG++LDADRNLKAMKKRSTLKLL+EL+F+G
Sbjct: 117 VQICSLLHQRYKDFSPCLIQGLLKVFFPGKSGDELDADRNLKAMKKRSTLKLLMELFFVG 176
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQGRIFLGLPLSGPGQEIYEEF 180
++EDS+IF NIIKDLTSIEHL+DRDTT TNLTLLASFARQGRI LGLP P + +EEF
Sbjct: 177 VVEDSAIFNNIIKDLTSIEHLRDRDTTLTNLTLLASFARQGRILLGLP---PTAQDHEEF 233
Query: 181 FKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSS 240
FK LNITADQKK F+KAFHTYY+A ELLQ+EHTSLRQME ENAKILNAKGEL++EN SS
Sbjct: 234 FKSLNITADQKKFFRKAFHTYYDAAAELLQSEHTSLRQMEQENAKILNAKGELNDENVSS 293
Query: 241 YEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGED-ASPASGKDSSVPEPVW 299
YEKLRKSYDHLYRNVSS AEALDMQPPVMPED HTTRV++GED +SPA+GKDSSV E +W
Sbjct: 294 YEKLRKSYDHLYRNVSSFAEALDMQPPVMPEDGHTTRVSAGEDVSSPAAGKDSSVIEAIW 353
Query: 300 DDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTA 359
DDE+TRAFYECLPDLRAFVPAVLLGEAE KANE S KP E + SE +QGQ + +
Sbjct: 354 DDEDTRAFYECLPDLRAFVPAVLLGEAEPKANEQSAKPAENLAE--SEAEQGQQTSLEAI 411
Query: 360 EVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKE 419
EVS D +GK EKG+ KGKD+EEKDKEK D DKEKGKE
Sbjct: 412 EVSTDC-LLQDGKINEKGE------------------KGKDREEKDKEKNNDTDKEKGKE 452
Query: 420 KDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRA 479
KD +RK+E EKEKLK +EGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSK+NRK+LVRA
Sbjct: 453 KDGDRKMENEKEKLKNIEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKANRKKLVRA 512
Query: 480 LFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNI 539
LFNVPRTSLELLPYYSRMVATLSTCMKDVS +L+QMLEEEF+FL+NKKDQMNIETKIRNI
Sbjct: 513 LFNVPRTSLELLPYYSRMVATLSTCMKDVSVILLQMLEEEFSFLLNKKDQMNIETKIRNI 572
Query: 540 RFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANM 599
RFIGELCKFKIA AGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPET++RMANM
Sbjct: 573 RFIGELCKFKIASAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETTVRMANM 632
Query: 600 LEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSS 659
LEILMRLKNVKNLDPRH TLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKS+
Sbjct: 633 LEILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSA 692
Query: 660 IEHVLRQLRKLPWSDCESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEV 719
IE+VLRQLRKLPWS+CE YLLKCFMKVHKGKYGQIHLIASLT+GLSRYHDEF+VAVVDEV
Sbjct: 693 IENVLRQLRKLPWSECEQYLLKCFMKVHKGKYGQIHLIASLTSGLSRYHDEFSVAVVDEV 752
Query: 720 LEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHGTAE 775
LEEIRLGLE+NDYGMQQ+R+AHMRFLGELYNYE VDSSV+FDTLYLILVFGHGT+E
Sbjct: 753 LEEIRLGLEVNDYGMQQKRIAHMRFLGELYNYELVDSSVVFDTLYLILVFGHGTSE 808
>gi|449524126|ref|XP_004169074.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts
2-like, partial [Cucumis sativus]
Length = 1144
Score = 1170 bits (3026), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 584/716 (81%), Positives = 635/716 (88%), Gaps = 25/716 (3%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
++ICSLLHQRYKDFSPCLI GLLKVFFPGKSG++LDADRNLKAMKKRSTLKLL+EL F+G
Sbjct: 66 VQICSLLHQRYKDFSPCLIQGLLKVFFPGKSGDELDADRNLKAMKKRSTLKLLMELXFVG 125
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQGRIFLGLPLSGPGQEIYEEF 180
++EDS+IF NIIKDLTSIEHL+DRDTT TNLTLLASFARQGRI LGLP P + +EEF
Sbjct: 126 VVEDSAIFNNIIKDLTSIEHLRDRDTTLTNLTLLASFARQGRILLGLP---PTAQDHEEF 182
Query: 181 FKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSS 240
FK LNITADQKK F+KAFHTYY+A ELLQ+EHTSLRQME ENAKILNAKGEL++EN SS
Sbjct: 183 FKSLNITADQKKFFRKAFHTYYDAAAELLQSEHTSLRQMEQENAKILNAKGELNDENVSS 242
Query: 241 YEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGED-ASPASGKDSSVPEPVW 299
YEKLRKSYDHLYRNVSS AEALDMQPPVMPED HTTRV++ ED +SPA+GKDSSV E +W
Sbjct: 243 YEKLRKSYDHLYRNVSSFAEALDMQPPVMPEDGHTTRVSAXEDVSSPAAGKDSSVIEAIW 302
Query: 300 DDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTA 359
DDE+TRAFYECLPDLRAFVPAVLLGEAE KANE S KP E + SE +QGQ + +
Sbjct: 303 DDEDTRAFYECLPDLRAFVPAVLLGEAEPKANEQSAKPAENLAE--SEAEQGQQTSLEAI 360
Query: 360 EVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKE 419
EVS D +GK EKG+ KGKD+EEKDKEK D DKEKGKE
Sbjct: 361 EVSTDC-LLQDGKINEKGE------------------KGKDREEKDKEKNNDTDKEKGKE 401
Query: 420 KDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRA 479
K + + EKEKLK +EGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSK+NRK+LVRA
Sbjct: 402 KMEIERWKNEKEKLKNIEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKANRKKLVRA 461
Query: 480 LFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNI 539
LFNVPRTSLELLPYYSRMVATLSTCMKDVS +L+QMLEEEF+FL+NKKDQMNIETKIRNI
Sbjct: 462 LFNVPRTSLELLPYYSRMVATLSTCMKDVSVILLQMLEEEFSFLLNKKDQMNIETKIRNI 521
Query: 540 RFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANM 599
RFIGELCKFKIA AGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPET++RMANM
Sbjct: 522 RFIGELCKFKIASAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETTVRMANM 581
Query: 600 LEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSS 659
LEILMRLKNVKNLDPRH TLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKS+
Sbjct: 582 LEILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSA 641
Query: 660 IEHVLRQLRKLPWSDCESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEV 719
IE+VLRQLRKLPWS+CE YLLKCFMKVHKGKYGQIHLIASLT+GLSRYHDEF+VAVVDEV
Sbjct: 642 IENVLRQLRKLPWSECEQYLLKCFMKVHKGKYGQIHLIASLTSGLSRYHDEFSVAVVDEV 701
Query: 720 LEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHGTAE 775
LEEIRLGLE+NDYGMQ +R+AHMRF GELYNYE VDSSV+FDTLYLILVFGHGT+E
Sbjct: 702 LEEIRLGLEVNDYGMQXKRIAHMRFXGELYNYELVDSSVVFDTLYLILVFGHGTSE 757
>gi|356556505|ref|XP_003546565.1| PREDICTED: regulator of nonsense transcripts 2-like [Glycine max]
Length = 1187
Score = 1147 bits (2966), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 564/716 (78%), Positives = 630/716 (87%), Gaps = 26/716 (3%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
++ICSLLHQRYKDF+P L+ GLLKVF PGK G++ D DRNLKAMKKRS+LKLLLEL+F+G
Sbjct: 111 VQICSLLHQRYKDFAPSLVQGLLKVFSPGKPGDESDTDRNLKAMKKRSSLKLLLELFFVG 170
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQGRIFLGLPLSGPGQEIYEEF 180
+IED IFINIIKDL+S E LKDRD QT+LTLL+SFARQGRIFLGL +SGP EI+EEF
Sbjct: 171 VIEDGGIFINIIKDLSSGEQLKDRDAAQTSLTLLSSFARQGRIFLGLSVSGP--EIHEEF 228
Query: 181 FKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSS 240
FKGLNITADQKK+F+KA +++Y+A ELLQ+EH+SLR ME+EN+KILNAKGELS+EN +S
Sbjct: 229 FKGLNITADQKKVFRKACYSFYDAAAELLQSEHSSLRLMEHENSKILNAKGELSDENIAS 288
Query: 241 YEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDA-SPASGKDSSVPEPVW 299
YEKLRKSYDHLYRNV+SLAEALDMQPPVMPED HTTRVTSGED S ASGKDSSV EP+W
Sbjct: 289 YEKLRKSYDHLYRNVASLAEALDMQPPVMPEDGHTTRVTSGEDGVSSASGKDSSVVEPIW 348
Query: 300 DDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTA 359
DDE+TR FYECLPDLRAFVPAVLLGE E K++E S K + T+ E D+GQ ++
Sbjct: 349 DDEDTRTFYECLPDLRAFVPAVLLGETEPKSSEQSAKNQDLTTEILPESDKGQQTTHESG 408
Query: 360 EVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKE 419
EVS + A PE +S E+ KDKEEK+K + + D+EK KE
Sbjct: 409 EVSTESNALPEAESTERVKDKEEKDK-----------------------SNELDREKEKE 445
Query: 420 KDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRA 479
KD ++K E EK+KL+ +EGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRK+LVRA
Sbjct: 446 KDNDKKGENEKDKLRSLEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKKLVRA 505
Query: 480 LFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNI 539
LFNVPRTSLELLPYYSRMVATLST MKDVSS+L+QMLEEEFNFLINKKDQMNIE+KIRNI
Sbjct: 506 LFNVPRTSLELLPYYSRMVATLSTSMKDVSSILLQMLEEEFNFLINKKDQMNIESKIRNI 565
Query: 540 RFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANM 599
RFIGELCKFKIAP GLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPET+IRMANM
Sbjct: 566 RFIGELCKFKIAPPGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETTIRMANM 625
Query: 600 LEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSS 659
LEILMRLKNVKNLDPRH TLVENAYYLCKPPERSARV+KVRPPLHQYIRKLLFSDLDKS+
Sbjct: 626 LEILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARVAKVRPPLHQYIRKLLFSDLDKST 685
Query: 660 IEHVLRQLRKLPWSDCESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEV 719
IEHVLRQLRKLPW++CE YLLKCFMKV+KGKYGQIHLIASL AGLSRYHDEFAVA+VDEV
Sbjct: 686 IEHVLRQLRKLPWNECEPYLLKCFMKVYKGKYGQIHLIASLAAGLSRYHDEFAVAIVDEV 745
Query: 720 LEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHGTAE 775
LEEIR+GLELNDYGMQQRR+A+MRFLGELYNYEHVDSSVIF+TLYLIL+ GHGT+E
Sbjct: 746 LEEIRVGLELNDYGMQQRRIAYMRFLGELYNYEHVDSSVIFETLYLILIHGHGTSE 801
>gi|124359836|gb|ABD32424.2| Initiation factor eIF-4 gamma, middle; Up-frameshift suppressor 2
[Medicago truncatula]
Length = 1212
Score = 1129 bits (2921), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 572/716 (79%), Positives = 630/716 (87%), Gaps = 24/716 (3%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
++ICSLLHQRYKDF P LI GLLKVF PGKSG++ D+D+NLKAMKKRS+LKLLLEL+F+G
Sbjct: 117 VQICSLLHQRYKDFVPTLIQGLLKVFSPGKSGDETDSDKNLKAMKKRSSLKLLLELFFVG 176
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQGRIFLGLPLSGPGQEIYEEF 180
+IED IFI+IIKDLTS+E LKDR+ TQT+LTLL+SFARQGRIFLGL ++GP EI+EEF
Sbjct: 177 VIEDGGIFISIIKDLTSVEQLKDREATQTSLTLLSSFARQGRIFLGLSVTGP--EIHEEF 234
Query: 181 FKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSS 240
KGLNITADQKK+ +KA +++Y+ ELLQ+EH+SLR ME+EN+KILNAKGELSEEN SS
Sbjct: 235 MKGLNITADQKKVIRKACYSFYDTAAELLQSEHSSLRLMEHENSKILNAKGELSEENLSS 294
Query: 241 YEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDA-SPASGKDSSVPEPVW 299
YEKLRKSYDHLYRNVSSLAEALDMQPPVMPED HTTRVTSGE+A S A+GKDSSV EP+W
Sbjct: 295 YEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDGHTTRVTSGEEAVSSAAGKDSSVVEPIW 354
Query: 300 DDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTA 359
DDE+TRAFYECLPDLRAFVPAVLLGE E K NE SVK +Q T+ E D+ QL D+
Sbjct: 355 DDEDTRAFYECLPDLRAFVPAVLLGETEPKVNEQSVKGQDQSTEILPESDKSQLVTLDSG 414
Query: 360 EVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKE 419
EVS + PEG+S E DKEEKEK K D DKEK K E
Sbjct: 415 EVSTESSVLPEGESSEIVNDKEEKEKSKELDRDKEKEK---------------------E 453
Query: 420 KDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRA 479
K+ E+K E EKEKL+ +EGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRK+LVRA
Sbjct: 454 KEGEKKGEHEKEKLRSLEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKKLVRA 513
Query: 480 LFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNI 539
LF+VPRTSLELL YYSRMVATLSTCMKDVSS+L+QMLEEEFNFLINKKDQMNIETKIRNI
Sbjct: 514 LFSVPRTSLELLAYYSRMVATLSTCMKDVSSLLLQMLEEEFNFLINKKDQMNIETKIRNI 573
Query: 540 RFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANM 599
RFIGELCKFKIAPAGLVFSCLKACLDDF+HHNIDVACNLLETCGRFLYRSPETSIRM NM
Sbjct: 574 RFIGELCKFKIAPAGLVFSCLKACLDDFSHHNIDVACNLLETCGRFLYRSPETSIRMGNM 633
Query: 600 LEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSS 659
LEILMRLKNVKNLDPRH TLVENAYYLCKPPERSARV+KVRPPLHQYIRKLLFSDLDK++
Sbjct: 634 LEILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARVAKVRPPLHQYIRKLLFSDLDKTT 693
Query: 660 IEHVLRQLRKLPWSDCESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEV 719
IEHVLRQLRKLPWSDCE YLLKCFMKVHKGKYGQIHL+ASL AGLSRYHDEFAVA+VDEV
Sbjct: 694 IEHVLRQLRKLPWSDCELYLLKCFMKVHKGKYGQIHLVASLAAGLSRYHDEFAVAIVDEV 753
Query: 720 LEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHGTAE 775
LEEIR+GLELNDYGMQQRR+A+MRFLGELYNY+H DSSVIF+TLYLI+VFGHGT E
Sbjct: 754 LEEIRIGLELNDYGMQQRRVANMRFLGELYNYKHADSSVIFETLYLIIVFGHGTPE 809
>gi|242065844|ref|XP_002454211.1| hypothetical protein SORBIDRAFT_04g026740 [Sorghum bicolor]
gi|241934042|gb|EES07187.1| hypothetical protein SORBIDRAFT_04g026740 [Sorghum bicolor]
Length = 1193
Score = 1116 bits (2887), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 540/715 (75%), Positives = 614/715 (85%), Gaps = 27/715 (3%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
+++CSLLHQRYKDFSPCLI GLLKVFFPGKSG+DLDAD+N +AMKKRSTLKLL+ELYF+G
Sbjct: 120 VQVCSLLHQRYKDFSPCLIQGLLKVFFPGKSGDDLDADKNSRAMKKRSTLKLLIELYFVG 179
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQGRIFLGLPLSGPGQEIYEEF 180
I+ED+SIF+NIIKDLTS EHLKDR+ TQTNL+LL++FARQG+ FLGL GQE Y+EF
Sbjct: 180 IVEDASIFVNIIKDLTSAEHLKDREGTQTNLSLLSTFARQGKFFLGL--QSHGQEAYDEF 237
Query: 181 FKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSS 240
FK LN+TA+QKK FKKA ++YY+AV ELLQ+EH SLR ME ENAK+L+AKGELS+EN++S
Sbjct: 238 FKDLNVTAEQKKFFKKALNSYYDAVAELLQSEHASLRLMEAENAKVLSAKGELSDENTAS 297
Query: 241 YEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASGKDSSVPEPVWD 300
YEKLRKS+D L R VSSLAE+LDMQPPVMP+D +TTRVT+G DA P+SGK+SS EP+WD
Sbjct: 298 YEKLRKSFDQLLRGVSSLAESLDMQPPVMPDDGNTTRVTTGTDALPSSGKESSALEPIWD 357
Query: 301 DEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTAE 360
DE+T+AFYE LPDLRAFVPAVLLGE E K NE K EQ ++ SE D D +
Sbjct: 358 DEDTKAFYESLPDLRAFVPAVLLGEVEPKLNEQHAKGREQSSESTSEQD---TELHDNVQ 414
Query: 361 VSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEK 420
SA E + + K D KE E+KDKEK KD +KEK KEK
Sbjct: 415 TSA----------------TEHQLEVKVDDVVKES------EDKDKEKGKDGEKEKSKEK 452
Query: 421 DTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRAL 480
D ++K E EKEK + ++G +LD LLQRLPGCVSRDLIDQLTVEFCYLNSK+NRK+LVRAL
Sbjct: 453 DLDKKNEREKEKGRALDGASLDNLLQRLPGCVSRDLIDQLTVEFCYLNSKANRKKLVRAL 512
Query: 481 FNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIR 540
FNV RTSLELLPYYSR+VATLSTCMKDV SML+ MLEEEFNFLINKKDQ+NIETKI+NIR
Sbjct: 513 FNVNRTSLELLPYYSRLVATLSTCMKDVPSMLLSMLEEEFNFLINKKDQINIETKIKNIR 572
Query: 541 FIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANML 600
FIGELCKFK+AP LVFSCLKACLDDF+HHNIDVACNLLETCGRFLYRSPET+IRMANML
Sbjct: 573 FIGELCKFKMAPPALVFSCLKACLDDFSHHNIDVACNLLETCGRFLYRSPETTIRMANML 632
Query: 601 EILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSI 660
EILMRLKNVKNLDPRH TLVENAYYLCKPPERSAR+SKVRPPLHQYIRKLLFSDLDKSS+
Sbjct: 633 EILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARISKVRPPLHQYIRKLLFSDLDKSSV 692
Query: 661 EHVLRQLRKLPWSDCESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVL 720
EHVLRQLRKLPW++C+ YLLKCF+KVHKGKY Q+HLIA LTA LSRYHD+FAVAVVDEVL
Sbjct: 693 EHVLRQLRKLPWAECQQYLLKCFLKVHKGKYSQVHLIALLTASLSRYHDDFAVAVVDEVL 752
Query: 721 EEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHGTAE 775
EEIR+GLELNDYGMQQRRLAHMRFLGELY+Y+H+DSSV+FDTLYLI+VFGHGT E
Sbjct: 753 EEIRVGLELNDYGMQQRRLAHMRFLGELYSYKHIDSSVVFDTLYLIIVFGHGTPE 807
>gi|125540395|gb|EAY86790.1| hypothetical protein OsI_08170 [Oryza sativa Indica Group]
Length = 1190
Score = 1115 bits (2884), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 544/715 (76%), Positives = 618/715 (86%), Gaps = 30/715 (4%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
+++CSLLHQRYKDFSPCL GLLKVFFPGKSGEDLDAD+N +AMKKRSTLKLL+ELYF+G
Sbjct: 120 VQVCSLLHQRYKDFSPCLTQGLLKVFFPGKSGEDLDADKNSRAMKKRSTLKLLIELYFVG 179
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQGRIFLGLPLSGPGQEIYEEF 180
I+ED+SIF+NIIKDLTS+EHLKDR+TTQ NL+LL++FARQGR F+GL GQE Y+E
Sbjct: 180 IVEDASIFVNIIKDLTSLEHLKDRETTQANLSLLSAFARQGRFFIGL--QSHGQEAYDEL 237
Query: 181 FKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSS 240
FK LN+TADQKK FKKA +TYY+AV ELLQ+EH SLR ME ENAK+L AKGELS+EN++S
Sbjct: 238 FKDLNVTADQKKFFKKALNTYYDAVAELLQSEHASLRLMEAENAKVLTAKGELSDENTAS 297
Query: 241 YEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASGKDSSVPEPVWD 300
YEKLRKS+DHL R VSSLAEALDMQPPVMP+D +TTRVT+G D +P++ K+ S EP+WD
Sbjct: 298 YEKLRKSFDHLQRGVSSLAEALDMQPPVMPDDGNTTRVTTGSDVAPSTAKEPSALEPIWD 357
Query: 301 DEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTAE 360
DE+T+AFYE LPDLRAFVPAVLLGEAE K NE K EQ SEP +A QDT
Sbjct: 358 DEDTKAFYESLPDLRAFVPAVLLGEAEPKLNE---KGREQ-----SEP----VAEQDT-- 403
Query: 361 VSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEK 420
D+ +P+ S+ E + KA D KD EEKDK+K K DKEK KEK
Sbjct: 404 ---DVHDNPQTSSI-----TEYHLEGKADD------GVKDSEEKDKDKGKGVDKEKSKEK 449
Query: 421 DTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRAL 480
D +RK E EKEK++ V+G +LD LLQRLPGCVSRDLIDQLTVEFCYLNSK++RK+LVR L
Sbjct: 450 DFDRKTEREKEKIRAVDGASLDNLLQRLPGCVSRDLIDQLTVEFCYLNSKASRKKLVRTL 509
Query: 481 FNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIR 540
FNVPRTSLELLPYYSR+VATLSTCMKDV SML+ MLEEEFNFLINKKDQ+NIETKI+NIR
Sbjct: 510 FNVPRTSLELLPYYSRLVATLSTCMKDVPSMLLSMLEEEFNFLINKKDQINIETKIKNIR 569
Query: 541 FIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANML 600
FIGELCKFKIAPA LVFSCLK+CLDDF+HHNIDVACNLLETCGRFLYRSPET+IRMANML
Sbjct: 570 FIGELCKFKIAPAALVFSCLKSCLDDFSHHNIDVACNLLETCGRFLYRSPETTIRMANML 629
Query: 601 EILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSI 660
EILMRLKNVKNLDPRH TLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSS+
Sbjct: 630 EILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSV 689
Query: 661 EHVLRQLRKLPWSDCESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVL 720
EHVLRQLRKLPW +C+ YL+KCF+KVHKGKY +HLIA LTAGLSR+HD+FAV+VVDEVL
Sbjct: 690 EHVLRQLRKLPWVECQQYLIKCFLKVHKGKYSHVHLIALLTAGLSRHHDDFAVSVVDEVL 749
Query: 721 EEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHGTAE 775
EEIR+GLELNDYGMQQRRLAHMRFLGELY+Y+H+DSSV+F+TLYLI+VFGHGT E
Sbjct: 750 EEIRVGLELNDYGMQQRRLAHMRFLGELYSYKHIDSSVVFETLYLIIVFGHGTPE 804
>gi|49389189|dbj|BAD26479.1| putative hUPF2 [Oryza sativa Japonica Group]
gi|125582966|gb|EAZ23897.1| hypothetical protein OsJ_07617 [Oryza sativa Japonica Group]
Length = 1190
Score = 1113 bits (2879), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 543/715 (75%), Positives = 617/715 (86%), Gaps = 30/715 (4%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
+++CSLLHQRYKDFSPCL GLLKVFFPGKSGEDLDAD+N +AMKKRSTLKLL+ELYF+G
Sbjct: 120 VQVCSLLHQRYKDFSPCLTQGLLKVFFPGKSGEDLDADKNSRAMKKRSTLKLLIELYFVG 179
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQGRIFLGLPLSGPGQEIYEEF 180
I+ED+SIF+NIIKDLTS+EHLKDR+TTQ NL+LL++FARQGR F+GL GQE Y+E
Sbjct: 180 IVEDASIFVNIIKDLTSLEHLKDRETTQANLSLLSAFARQGRFFIGL--QSHGQEAYDEL 237
Query: 181 FKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSS 240
FK LN+TADQKK FKKA +TYY+AV ELLQ+EH SLR ME ENAK+L AKGELS+EN++S
Sbjct: 238 FKDLNVTADQKKFFKKALNTYYDAVAELLQSEHASLRLMEAENAKVLTAKGELSDENTAS 297
Query: 241 YEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASGKDSSVPEPVWD 300
YEKLRKS+DHL R VSSLAEALDMQPPVMP+D +TTRVT+G D +P++ K+ S EP+WD
Sbjct: 298 YEKLRKSFDHLQRGVSSLAEALDMQPPVMPDDGNTTRVTTGSDVAPSTAKEPSALEPIWD 357
Query: 301 DEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTAE 360
DE+T+AFYE LPDLRAFVPAVLLGEAE K NE K EQ SEP +A QDT
Sbjct: 358 DEDTKAFYESLPDLRAFVPAVLLGEAEPKLNE---KGREQ-----SEP----VAEQDT-- 403
Query: 361 VSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEK 420
D+ +P+ S+ E + KA D KD EEKDK+K K DKEK KEK
Sbjct: 404 ---DVHDNPQTSSI-----TEYHLEGKADD------GVKDSEEKDKDKGKGVDKEKSKEK 449
Query: 421 DTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRAL 480
D +RK E EKEK++ V+G +LD LLQRLPGCVSRDLIDQLTVEFCYLNSK++RK+LVR L
Sbjct: 450 DFDRKTEREKEKIRAVDGASLDNLLQRLPGCVSRDLIDQLTVEFCYLNSKASRKKLVRTL 509
Query: 481 FNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIR 540
FNVPRTSLELLPYYSR+VATLSTCMKDV SML+ MLEEEFNFLINKKDQ+NIETKI+NIR
Sbjct: 510 FNVPRTSLELLPYYSRLVATLSTCMKDVPSMLLSMLEEEFNFLINKKDQINIETKIKNIR 569
Query: 541 FIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANML 600
FIGELCKFKIAPA LVFSCLK+CLDDF+HHNIDVACNLLETCGRFLYRSPET+IRMANML
Sbjct: 570 FIGELCKFKIAPAALVFSCLKSCLDDFSHHNIDVACNLLETCGRFLYRSPETTIRMANML 629
Query: 601 EILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSI 660
EILMRLKNVKNLDPRH TLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSS+
Sbjct: 630 EILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSV 689
Query: 661 EHVLRQLRKLPWSDCESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVL 720
EHVLRQLRKLPW +C+ YL+KCF+KVHKGKY +HLIA LTAGLSR+HD+FAV+VVDEVL
Sbjct: 690 EHVLRQLRKLPWVECQQYLIKCFLKVHKGKYSHVHLIALLTAGLSRHHDDFAVSVVDEVL 749
Query: 721 EEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHGTAE 775
EE R+GLELNDYGMQQRRLAHMRFLGELY+Y+H+DSSV+F+TLYLI+VFGHGT E
Sbjct: 750 EETRVGLELNDYGMQQRRLAHMRFLGELYSYKHIDSSVVFETLYLIIVFGHGTPE 804
>gi|356530553|ref|XP_003533845.1| PREDICTED: regulator of nonsense transcripts 2-like [Glycine max]
Length = 1188
Score = 1111 bits (2873), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 559/716 (78%), Positives = 628/716 (87%), Gaps = 26/716 (3%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
++ICSLLHQRYKDF+P L+ GLLKVF PGK G++ D DRNLKAMKKRS+LKLLLEL+F+G
Sbjct: 111 VQICSLLHQRYKDFAPSLVQGLLKVFSPGKPGDESDTDRNLKAMKKRSSLKLLLELFFVG 170
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQGRIFLGLPLSGPGQEIYEEF 180
+IED IFINIIKDLTS E LKDRD QT+LTLL+SFARQGRIFLGL +SGP EI+EEF
Sbjct: 171 VIEDGGIFINIIKDLTSGEQLKDRDAAQTSLTLLSSFARQGRIFLGLSVSGP--EIHEEF 228
Query: 181 FKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSS 240
FKGLNITADQKK+ +KA +++Y+A ELLQ+EH+SLR ME+EN+KILNAKGELS+EN +S
Sbjct: 229 FKGLNITADQKKVLRKACYSFYDAAAELLQSEHSSLRLMEHENSKILNAKGELSDENIAS 288
Query: 241 YEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDA-SPASGKDSSVPEPVW 299
YEKLRKSYDHLYRN+SSLAEALDMQPPVMPED HTTRVTSGED S ASGKDSSV EP+W
Sbjct: 289 YEKLRKSYDHLYRNISSLAEALDMQPPVMPEDGHTTRVTSGEDGISSASGKDSSVVEPIW 348
Query: 300 DDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTA 359
DDE+ R FYECLPDLRAFVPAVLLGE E K++E S K +Q T+ E D+G Q T
Sbjct: 349 DDEDARTFYECLPDLRAFVPAVLLGETEPKSSEQSAKNQDQTTEILPESDKG----QQTT 404
Query: 360 EVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKE 419
S ++ S E E + E+ K ++++K+K+K+ D+EK KE
Sbjct: 405 HESGEV-------STESSALPEAESTERVK------------DKEEKDKSKELDREKEKE 445
Query: 420 KDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRA 479
K+ ++K E EK+KL+ VEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKS+RK+LVRA
Sbjct: 446 KENDKKGENEKDKLRSVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSSRKKLVRA 505
Query: 480 LFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNI 539
LFNVPRTSLELLPYYSRMVATLSTCMKDVSS+L+QMLEEEFNFLINKKDQMNIETKIRNI
Sbjct: 506 LFNVPRTSLELLPYYSRMVATLSTCMKDVSSILLQMLEEEFNFLINKKDQMNIETKIRNI 565
Query: 540 RFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANM 599
RFIGELCKFKI+P GLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPET+IRMANM
Sbjct: 566 RFIGELCKFKISPPGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETTIRMANM 625
Query: 600 LEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSS 659
LEILMRLKNVKNLDPRH TLVENAYYLCKPPERSARV+KVRPPLHQYIRKLLFSDLDKS+
Sbjct: 626 LEILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARVAKVRPPLHQYIRKLLFSDLDKST 685
Query: 660 IEHVLRQLRKLPWSDCESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEV 719
IEHVLRQLRKLPW++CE YLLKCFMKV+KGKYGQIHLIASL AGLSRYHDEFAVA+VDEV
Sbjct: 686 IEHVLRQLRKLPWNECEPYLLKCFMKVYKGKYGQIHLIASLAAGLSRYHDEFAVAIVDEV 745
Query: 720 LEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHGTAE 775
LEEIR+GLELNDYGMQQRR+A+MRFLGELYNYEHVDSSVIF+TLYLIL++GHGT E
Sbjct: 746 LEEIRVGLELNDYGMQQRRIAYMRFLGELYNYEHVDSSVIFETLYLILIYGHGTQE 801
>gi|357450481|ref|XP_003595517.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484565|gb|AES65768.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1705
Score = 1110 bits (2872), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 572/739 (77%), Positives = 630/739 (85%), Gaps = 47/739 (6%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
++ICSLLHQRYKDF P LI GLLKVF PGKSG++ D+D+NLKAMKKRS+LKLLLEL+F+G
Sbjct: 117 VQICSLLHQRYKDFVPTLIQGLLKVFSPGKSGDETDSDKNLKAMKKRSSLKLLLELFFVG 176
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQGRIFLGLPLSGPGQEIYEEF 180
+IED IFI+IIKDLTS+E LKDR+ TQT+LTLL+SFARQGRIFLGL ++GP EI+EEF
Sbjct: 177 VIEDGGIFISIIKDLTSVEQLKDREATQTSLTLLSSFARQGRIFLGLSVTGP--EIHEEF 234
Query: 181 FKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSS 240
KGLNITADQKK+ +KA +++Y+ ELLQ+EH+SLR ME+EN+KILNAKGELSEEN SS
Sbjct: 235 MKGLNITADQKKVIRKACYSFYDTAAELLQSEHSSLRLMEHENSKILNAKGELSEENLSS 294
Query: 241 YEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDA-SPASGKDSSVPEPVW 299
YEKLRKSYDHLYRNVSSLAEALDMQPPVMPED HTTRVTSGE+A S A+GKDSSV EP+W
Sbjct: 295 YEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDGHTTRVTSGEEAVSSAAGKDSSVVEPIW 354
Query: 300 DDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTA 359
DDE+TRAFYECLPDLRAFVPAVLLGE E K NE SVK +Q T+ E D+ QL D+
Sbjct: 355 DDEDTRAFYECLPDLRAFVPAVLLGETEPKVNEQSVKGQDQSTEILPESDKSQLVTLDSG 414
Query: 360 EVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKE 419
EVS + PEG+S E DKEEKEK K D DKEK K E
Sbjct: 415 EVSTESSVLPEGESSEIVNDKEEKEKSKELDRDKEKEK---------------------E 453
Query: 420 KDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRA 479
K+ E+K E EKEKL+ +EGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRK+LVRA
Sbjct: 454 KEGEKKGEHEKEKLRSLEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKKLVRA 513
Query: 480 LFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNI 539
LF+VPRTSLELL YYSRMVATLSTCMKDVSS+L+QMLEEEFNFLINKKDQMNIETKIRNI
Sbjct: 514 LFSVPRTSLELLAYYSRMVATLSTCMKDVSSLLLQMLEEEFNFLINKKDQMNIETKIRNI 573
Query: 540 RFIGELCKFKIAPAGLVFSCLK-----------------------ACLDDFTHHNIDVAC 576
RFIGELCKFKIAPAGLVFSCLK ACLDDF+HHNIDVAC
Sbjct: 574 RFIGELCKFKIAPAGLVFSCLKNEYMYCDVAYKLLNPQFMLLSFQACLDDFSHHNIDVAC 633
Query: 577 NLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARV 636
NLLETCGRFLYRSPETSIRM NMLEILMRLKNVKNLDPRH TLVENAYYLCKPPERSARV
Sbjct: 634 NLLETCGRFLYRSPETSIRMGNMLEILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARV 693
Query: 637 SKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCESYLLKCFMKVHKGKYGQIHL 696
+KVRPPLHQYIRKLLFSDLDK++IEHVLRQLRKLPWSDCE YLLKCFMKVHKGKYGQIHL
Sbjct: 694 AKVRPPLHQYIRKLLFSDLDKTTIEHVLRQLRKLPWSDCELYLLKCFMKVHKGKYGQIHL 753
Query: 697 IASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDS 756
+ASL AGLSRYHDEFAVA+VDEVLEEIR+GLELNDYGMQQRR+A+MRFLGELYNY+H DS
Sbjct: 754 VASLAAGLSRYHDEFAVAIVDEVLEEIRIGLELNDYGMQQRRVANMRFLGELYNYKHADS 813
Query: 757 SVIFDTLYLILVFGHGTAE 775
SVIF+TLYLI+VFGHGT E
Sbjct: 814 SVIFETLYLIIVFGHGTPE 832
>gi|413923152|gb|AFW63084.1| hypothetical protein ZEAMMB73_018066 [Zea mays]
Length = 1107
Score = 1103 bits (2853), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 534/715 (74%), Positives = 617/715 (86%), Gaps = 27/715 (3%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
+++CSLLHQRYKDFSPCLI+GLLK+FFPGKSG+DLDAD+N +AMKKRSTLKLL+ELYF+G
Sbjct: 34 VQVCSLLHQRYKDFSPCLIEGLLKIFFPGKSGDDLDADKNSRAMKKRSTLKLLIELYFVG 93
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQGRIFLGLPLSGPGQEIYEEF 180
I+ED+SIF+NIIKDLTS EHLKDR+ TQTNL+LL++FARQG+ F+GL GQE Y+EF
Sbjct: 94 IVEDASIFVNIIKDLTSAEHLKDREGTQTNLSLLSTFARQGKFFVGL--QPHGQEAYDEF 151
Query: 181 FKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSS 240
FK LN+TA+QKK FKKA ++YY+AV ELLQ+EH SLR ME ENAK+L+AKGELS+EN+SS
Sbjct: 152 FKDLNVTAEQKKFFKKALNSYYDAVAELLQSEHASLRLMEAENAKVLSAKGELSDENTSS 211
Query: 241 YEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASGKDSSVPEPVWD 300
YEKLRKS+D L R VSSLAE+LDMQPPVMP+D +TTRVT+G DA P+SGK+SS EP+WD
Sbjct: 212 YEKLRKSFDQLLRGVSSLAESLDMQPPVMPDDGNTTRVTTGTDALPSSGKESSALEPIWD 271
Query: 301 DEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTAE 360
DE+T+AFYE LPDLRAFVPAVLLGE E K+NE VK E L+ + T+E
Sbjct: 272 DEDTKAFYESLPDLRAFVPAVLLGEVEPKSNEQHVKGRE-------------LSGESTSE 318
Query: 361 VSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEK 420
+L + + E+ + + K D KE E++DKEK KD +KEK KEK
Sbjct: 319 QETELHDNVPTSATER------QLEVKVDDLVKES------EDRDKEKGKDGEKEKSKEK 366
Query: 421 DTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRAL 480
D ++K E EKEK + ++G +LD LLQRLPGCVSRDLIDQLTVEFCYLNSK+NRK+LVRAL
Sbjct: 367 DLDKKNEREKEKGRVLDGASLDNLLQRLPGCVSRDLIDQLTVEFCYLNSKANRKKLVRAL 426
Query: 481 FNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIR 540
FNV RTSLELLPYYSR+VATLSTCMKDV SML+ MLEEEFNFLINKKDQ+NIETKI+NIR
Sbjct: 427 FNVNRTSLELLPYYSRLVATLSTCMKDVPSMLLSMLEEEFNFLINKKDQINIETKIKNIR 486
Query: 541 FIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANML 600
FIGELCKFK+AP LVFSCLKACLDDF+HHNIDVACNLLETCGRFLYRSPET+IRMANML
Sbjct: 487 FIGELCKFKMAPPALVFSCLKACLDDFSHHNIDVACNLLETCGRFLYRSPETTIRMANML 546
Query: 601 EILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSI 660
EILMRLKNVKNLD RH TLVENAYYLCKPPERSAR+SKVRPPLHQYIRKLLFSDLDKSS+
Sbjct: 547 EILMRLKNVKNLDSRHSTLVENAYYLCKPPERSARISKVRPPLHQYIRKLLFSDLDKSSV 606
Query: 661 EHVLRQLRKLPWSDCESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVL 720
EHVLRQLRKLPW++C+ YLLKCF+KVHKGKY Q+HLIA LTA LSRYHD+FAV+VVDEVL
Sbjct: 607 EHVLRQLRKLPWAECQQYLLKCFLKVHKGKYSQVHLIALLTASLSRYHDDFAVSVVDEVL 666
Query: 721 EEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHGTAE 775
EEIR+GLELNDYGMQQRRLAHMRFLGELY+Y+H+DSSV+FDTLYLI+VFGHGT E
Sbjct: 667 EEIRVGLELNDYGMQQRRLAHMRFLGELYSYKHIDSSVVFDTLYLIIVFGHGTPE 721
>gi|357150316|ref|XP_003575417.1| PREDICTED: regulator of nonsense transcripts 2-like [Brachypodium
distachyon]
Length = 1195
Score = 1087 bits (2812), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 527/715 (73%), Positives = 617/715 (86%), Gaps = 26/715 (3%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
+++CSLLH+RYKDFSPCLI GLLKVFFPGKSG+D+D D+N +AMKKRSTLKLL+ELYF+G
Sbjct: 120 VQVCSLLHRRYKDFSPCLIQGLLKVFFPGKSGDDMDVDKNSRAMKKRSTLKLLIELYFVG 179
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQGRIFLGLPLSGPGQEIYEEF 180
I+ED+SIF+NIIKDLTS+EHLKDR+ TQTNL+LL++F RQGR+F+GL G E Y+EF
Sbjct: 180 IVEDASIFVNIIKDLTSLEHLKDREATQTNLSLLSTFVRQGRLFIGL--QSHGHEPYDEF 237
Query: 181 FKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSS 240
FK LN+TADQKK FKKA ++YY+AV ELLQ+EH SL ME ENAK+L+AKGELS+EN++S
Sbjct: 238 FKDLNVTADQKKFFKKALNSYYDAVSELLQSEHASLHLMEAENAKVLSAKGELSDENTAS 297
Query: 241 YEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASGKDSSVPEPVWD 300
YEKLRKS+D L R VSSLAEA+D+QPPVMP+D +TTRVT+G D +P+SGK+SSV EP+WD
Sbjct: 298 YEKLRKSFDQLLRGVSSLAEAIDLQPPVMPDDGNTTRVTTGTDVTPSSGKESSVLEPIWD 357
Query: 301 DEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTAE 360
D++T+ FYE LPDLRAFVPAVLLGEAE K NE K EQ + ++E + A D A+
Sbjct: 358 DDDTKTFYESLPDLRAFVPAVLLGEAEQKLNEQHAKGREQSNESSAEQ---ETEAHDNAQ 414
Query: 361 VSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEK 420
S+ EGK+ + KD E+K+K+K KDP+KEK K +K
Sbjct: 415 TSSATEDQLEGKTDDVAKDNEDKDKDKGKDPEKEKTK---------------------DK 453
Query: 421 DTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRAL 480
D +RK E EKEK++ +G +LD LLQRLPGCVSRDLIDQLTVEFCYLNSK++RK+LVRA+
Sbjct: 454 DLDRKTEKEKEKVRASDGGSLDNLLQRLPGCVSRDLIDQLTVEFCYLNSKASRKKLVRAV 513
Query: 481 FNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIR 540
F+VPRTSLELLPYYSR+VATLS CMKDV SML+ MLEEEFNFLINKKDQ+NIETKI+NIR
Sbjct: 514 FSVPRTSLELLPYYSRLVATLSLCMKDVPSMLLSMLEEEFNFLINKKDQINIETKIKNIR 573
Query: 541 FIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANML 600
FIGELCKFKIAPA LVFSCLKACLDDF+HHNIDVACNLLETCGRFLYRSPET+IRMANML
Sbjct: 574 FIGELCKFKIAPAALVFSCLKACLDDFSHHNIDVACNLLETCGRFLYRSPETTIRMANML 633
Query: 601 EILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSI 660
EILMRLKNVKNLDPRH TLVENAYYLCKPPERSARVSKVRPPL+QYIRKLLFSDLDKSS+
Sbjct: 634 EILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARVSKVRPPLYQYIRKLLFSDLDKSSV 693
Query: 661 EHVLRQLRKLPWSDCESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVL 720
EHVLRQLRKLPW++C+ YL+KCF+KVHKGKY Q+HLIA LTAGLSRYHD+FAVAVVDEVL
Sbjct: 694 EHVLRQLRKLPWAECQQYLVKCFLKVHKGKYSQVHLIALLTAGLSRYHDDFAVAVVDEVL 753
Query: 721 EEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHGTAE 775
EEIR+GLELNDY MQQRRLAHMRFLGELY+Y+H+DSSV+F+TLYLI++FGHGT E
Sbjct: 754 EEIRVGLELNDYAMQQRRLAHMRFLGELYSYKHIDSSVVFETLYLIILFGHGTQE 808
>gi|297827515|ref|XP_002881640.1| RNA binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297327479|gb|EFH57899.1| RNA binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 1181
Score = 1079 bits (2791), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 543/716 (75%), Positives = 627/716 (87%), Gaps = 27/716 (3%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
++ICSLLHQRYK+FSP L GLLKVFFPGKS EDLDAD+N KAMKKRSTLKLLLELY++G
Sbjct: 112 VQICSLLHQRYKEFSPSLTQGLLKVFFPGKSAEDLDADKNSKAMKKRSTLKLLLELYYVG 171
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQGRIFLGLPLSGPGQEIYEEF 180
+IEDS+IFINIIKDLTS+E LKDRDTTQTNLTLLASFARQGR+FLGLP+SG E+F
Sbjct: 172 VIEDSNIFINIIKDLTSVEQLKDRDTTQTNLTLLASFARQGRVFLGLPISGQD----EDF 227
Query: 181 FKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSS 240
FKGL+++ADQKK FKKAF+TYY+A+ +LLQ+EH L QME ENAK++NAKGELSE+++SS
Sbjct: 228 FKGLDVSADQKKSFKKAFNTYYDALADLLQSEHKLLLQMEKENAKLVNAKGELSEDSASS 287
Query: 241 YEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASG-KDSSVPEPVW 299
YEKLRKSYDHLYRN+SSLAE+LDMQPPVMPED TTR+T+G++ASP+ KD+SVPEP+W
Sbjct: 288 YEKLRKSYDHLYRNISSLAESLDMQPPVMPED-GTTRLTAGDEASPSGAVKDTSVPEPIW 346
Query: 300 DDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTA 359
DDE+T+ FYECLPDLRAFVPAVLLGEAE K+NE S K ++ ++ +SE + Q +DT
Sbjct: 347 DDEDTKTFYECLPDLRAFVPAVLLGEAEPKSNEQSAKAKDKSSESSSEVVENQQTTEDTT 406
Query: 360 EVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKE 419
EVSAD G+ +G + E+ K+KEE EKEKAKD KEKGK E
Sbjct: 407 EVSADSGSMADGSNAEQPKEKEEVEKEKAKDARKEKGK---------------------E 445
Query: 420 KDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRA 479
KD ++K+E EKEK K ++ N + LLQRLPGCVSRDLIDQLTVE+CYLNSK+NRK+LV+A
Sbjct: 446 KDGDKKMENEKEKGKSLDVANFERLLQRLPGCVSRDLIDQLTVEYCYLNSKTNRKKLVKA 505
Query: 480 LFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNI 539
LFNVPRTSLELL YYSRMVATL++CMKD+ SML+QMLE+EFN L++KKDQMNIETKIRNI
Sbjct: 506 LFNVPRTSLELLAYYSRMVATLASCMKDIPSMLVQMLEDEFNSLVHKKDQMNIETKIRNI 565
Query: 540 RFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANM 599
RFIGELCKFKI PAGLVFSCLKACLD+FTHHNIDVACNLLETCGRFLYRSPET++RM NM
Sbjct: 566 RFIGELCKFKIVPAGLVFSCLKACLDEFTHHNIDVACNLLETCGRFLYRSPETTLRMTNM 625
Query: 600 LEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSS 659
L+ILMRLKNVKNLDPR TLVENAYYLCKPPERSAR+SKVRPPLHQYIRKLLFSDLDK S
Sbjct: 626 LDILMRLKNVKNLDPRQSTLVENAYYLCKPPERSARISKVRPPLHQYIRKLLFSDLDKDS 685
Query: 660 IEHVLRQLRKLPWSDCESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEV 719
I +VL+QLRKLPWS+CE Y+LKCFMKVHKGKYGQIHLIASLT+GLSR+HDEFAVAVVDEV
Sbjct: 686 IANVLKQLRKLPWSECEQYILKCFMKVHKGKYGQIHLIASLTSGLSRHHDEFAVAVVDEV 745
Query: 720 LEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHGTAE 775
LEEIR+GLELN+YG QQ+RLAHMRFLGELYNYEHVDSSVIF+TLYL L++GH T+E
Sbjct: 746 LEEIRVGLELNEYGAQQKRLAHMRFLGELYNYEHVDSSVIFETLYLTLLYGHDTSE 801
>gi|79570971|ref|NP_181459.4| RNA binding protein [Arabidopsis thaliana]
gi|330254557|gb|AEC09651.1| RNA binding protein [Arabidopsis thaliana]
Length = 1181
Score = 1063 bits (2749), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 541/716 (75%), Positives = 625/716 (87%), Gaps = 27/716 (3%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
++ICSLLHQRYK+FS L GLLKVFFPGKS EDL+AD+N KAMKKRSTLKLLLELY++G
Sbjct: 112 VQICSLLHQRYKEFSASLTQGLLKVFFPGKSAEDLEADKNSKAMKKRSTLKLLLELYYVG 171
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQGRIFLGLPLSGPGQEIYEEF 180
+IEDS+IFINIIKDLTS+E LKDRDTTQTNLTLL SFARQGRIFLGLP+SG E+F
Sbjct: 172 VIEDSNIFINIIKDLTSVEQLKDRDTTQTNLTLLTSFARQGRIFLGLPISGQD----EDF 227
Query: 181 FKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSS 240
FKGL++TADQKK FKKAF+TYY+A+ +LLQ+EH L QME ENAK++NAKGELSE+++SS
Sbjct: 228 FKGLDVTADQKKSFKKAFNTYYDALADLLQSEHKLLLQMEKENAKLVNAKGELSEDSASS 287
Query: 241 YEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASG-KDSSVPEPVW 299
YEKLRKSYDHLYRN+SSLAEALDMQPPVMPED TTR+T+G++ASP+ KD+SVPEP+W
Sbjct: 288 YEKLRKSYDHLYRNISSLAEALDMQPPVMPED-GTTRLTAGDEASPSGTVKDTSVPEPIW 346
Query: 300 DDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTA 359
DDE+T+ FYECLPDLRAFVPAVLLGEAE K+NE S K E+ ++ +SE + Q +DT
Sbjct: 347 DDEDTKTFYECLPDLRAFVPAVLLGEAEPKSNEQSAKAKEKLSESSSEVVENQQTTEDTT 406
Query: 360 EVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKE 419
EVSAD AS + +S A+ P +++ E +KEKAKD KEKGKE
Sbjct: 407 EVSAD-SASMDDRS-------------NAEQPKEKE-------EVEKEKAKDTKKEKGKE 445
Query: 420 KDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRA 479
KD+E+K+E EKEK K ++ N + LLQRLPGCVSRDLIDQLTVE+CYLNSK+NRK+LV+A
Sbjct: 446 KDSEKKMEHEKEKGKSLDVANFERLLQRLPGCVSRDLIDQLTVEYCYLNSKTNRKKLVKA 505
Query: 480 LFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNI 539
LFNVPRTSLELL YYSRMVATL++CMKD+ SML+QMLE+EFN L++KKDQMNIETKIRNI
Sbjct: 506 LFNVPRTSLELLAYYSRMVATLASCMKDIPSMLVQMLEDEFNSLVHKKDQMNIETKIRNI 565
Query: 540 RFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANM 599
RFIGELCKFKI PAGLVFSCLKACLD+FTHHNIDVACNLLETCGRFLYRSPET++RM NM
Sbjct: 566 RFIGELCKFKIVPAGLVFSCLKACLDEFTHHNIDVACNLLETCGRFLYRSPETTLRMTNM 625
Query: 600 LEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSS 659
L+ILMRLKNVKNLDPR TLVENAYYLCKPPERSAR+SKVRPPLHQY+RKLLFSDLDK S
Sbjct: 626 LDILMRLKNVKNLDPRQSTLVENAYYLCKPPERSARISKVRPPLHQYVRKLLFSDLDKDS 685
Query: 660 IEHVLRQLRKLPWSDCESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEV 719
I +VL+QLRKLPWS+CE Y+LKCFMKVHKGKYGQIHLIASLT+GLSR+HDEF VAVVDEV
Sbjct: 686 IANVLKQLRKLPWSECEQYILKCFMKVHKGKYGQIHLIASLTSGLSRHHDEFVVAVVDEV 745
Query: 720 LEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHGTAE 775
LEEIR+GLELN+YG QQ+RLAHMRFLGELYNYEHVDSSVIF+TLYL L++GH T+E
Sbjct: 746 LEEIRVGLELNEYGAQQKRLAHMRFLGELYNYEHVDSSVIFETLYLTLLYGHDTSE 801
>gi|357164775|ref|XP_003580162.1| PREDICTED: regulator of nonsense transcripts 2-like [Brachypodium
distachyon]
Length = 1191
Score = 1014 bits (2623), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/715 (70%), Positives = 579/715 (80%), Gaps = 34/715 (4%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
++ICSLLHQRYKDFSPCL+ GLLK FFPGKSG+ L D+N +AMKKRSTLKLL+ELYF+G
Sbjct: 120 VQICSLLHQRYKDFSPCLVQGLLKAFFPGKSGDCLALDKNSRAMKKRSTLKLLMELYFVG 179
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQGRIFLGLPLSGPGQEIYEEF 180
I++D++ FINI+KDLTS+EHLKDR+TTQTNL+LLASFARQG+ FLGL GQE +EF
Sbjct: 180 IVDDATTFINIVKDLTSVEHLKDRETTQTNLSLLASFARQGKHFLGL--QKHGQEASDEF 237
Query: 181 FKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSS 240
F GL++T D K FKKA +YY+A +LQ+EH SLR ME+EN+KILNAKGELS+EN++
Sbjct: 238 FVGLSVTDDVKSFFKKALSSYYDATTVVLQSEHASLRVMESENSKILNAKGELSDENTAL 297
Query: 241 YEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASGKDSSVPEPVWD 300
YEKLRKS+D L VSSLAEALDMQPPVMP+D HTTRVT+G D SP +GK+SS E +WD
Sbjct: 298 YEKLRKSFDQLLHCVSSLAEALDMQPPVMPDDGHTTRVTTGTDLSP-TGKESSTVESIWD 356
Query: 301 DEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTAE 360
DE+T+AFYE LPDLR FVP VLLGEAE K + K EQ + ++ QD AE
Sbjct: 357 DEDTKAFYESLPDLRVFVPGVLLGEAEPKLVDQHGKVHEQTSSTLEHGNE----VQDNAE 412
Query: 361 VSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEK 420
S PE + + K K +DKEK DK K KEK
Sbjct: 413 TSV-----PEHQL-------------------EVKANIISKNREDKEKV---DKGKSKEK 445
Query: 421 DTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRAL 480
D RK + E +K++ +G +LD LLQRLP CVSRDLIDQLTVEFCYLNSK+NRK+LVR L
Sbjct: 446 DAGRKEDIESDKVRVTDGASLDNLLQRLPRCVSRDLIDQLTVEFCYLNSKANRKKLVRTL 505
Query: 481 FNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIR 540
FNVPRTSLELLPYYSR+VATLS CMKD+ SML+ M+EEEFNFLINKKDQ+ IETKIRNIR
Sbjct: 506 FNVPRTSLELLPYYSRLVATLSKCMKDLPSMLLPMIEEEFNFLINKKDQIKIETKIRNIR 565
Query: 541 FIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANML 600
FIGELCKFKIAP+GLVFSCLKACLDDF+HHNIDVACNLLETCGRFLY S T+IRM+NML
Sbjct: 566 FIGELCKFKIAPSGLVFSCLKACLDDFSHHNIDVACNLLETCGRFLYLSQGTTIRMSNML 625
Query: 601 EILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSI 660
EIL RLKNVKNLDP H TLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDK+S+
Sbjct: 626 EILRRLKNVKNLDPHHSTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKTSV 685
Query: 661 EHVLRQLRKLPWSDCESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVL 720
+HVLRQLRKLPW++CE YL+KCF+KVHKGKY Q+HLIA LTAGLS YHD F VAV+DEVL
Sbjct: 686 QHVLRQLRKLPWAECEQYLVKCFLKVHKGKYSQVHLIALLTAGLSHYHDGFPVAVIDEVL 745
Query: 721 EEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHGTAE 775
EEIR+GLELNDY MQQRRLAHMRFLGELYNYEH+DSSVIF+TL LI+VFG GT E
Sbjct: 746 EEIRVGLELNDYAMQQRRLAHMRFLGELYNYEHIDSSVIFETLNLIIVFGCGTVE 800
>gi|168035531|ref|XP_001770263.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678480|gb|EDQ64938.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1158
Score = 1001 bits (2587), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 498/719 (69%), Positives = 599/719 (83%), Gaps = 31/719 (4%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
+++CSLLHQRYKDF+P L+ GLLKVFFP K G+++D DR+ +AMKKRSTL+LL+ELYF G
Sbjct: 93 VQVCSLLHQRYKDFAPTLLAGLLKVFFPAK-GDEIDGDRSSRAMKKRSTLRLLMELYFCG 151
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQGRIFLGLPLSGPGQEIYEEF 180
+ ED S+FI+IIKDL EHL+DR+ TQTNL+LL SFARQGR LGLPL+G Q+ +E
Sbjct: 152 VFEDGSMFISIIKDLAGSEHLRDREATQTNLSLLVSFARQGRGLLGLPLNG--QDGQDEL 209
Query: 181 FKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSS 240
+K L+++ DQKK+ +K F ++ +AV ELLQ EH +LRQ+E ENA++LNAKGELSEEN+++
Sbjct: 210 YKELSMSNDQKKLLRKMFQSFLDAVVELLQTEHGALRQLEQENARMLNAKGELSEENATA 269
Query: 241 YEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDA-SPASGKDSSVPEPVW 299
YEKLRKSY+HL+RN+SSLAEA+DMQPPVMPED HTTRVTSG+D S A+GK+ + PEP+W
Sbjct: 270 YEKLRKSYEHLFRNISSLAEAIDMQPPVMPEDGHTTRVTSGDDGPSQATGKEPASPEPIW 329
Query: 300 DDEETRAFYECLPDLRAFVPAVLLGEAEHKA-NEPSVKPLEQPTDP-ASEPDQGQLAAQD 357
DDE+TR+FYE LPDLRAFVPAVLLGEAE K E S K EQ D +EP
Sbjct: 330 DDEDTRSFYENLPDLRAFVPAVLLGEAEPKGVAEASSKAAEQVVDVLETEP--------- 380
Query: 358 TAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKG 417
+VS + +P+ KS +K + + + K +++++ KD KEK
Sbjct: 381 --QVSETVPTAPDDKSSFSVSEKAKDKDKDDK-------------DRNRDVEKDKTKEKD 425
Query: 418 KEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTV-EFCYLNSKSNRKRL 476
KE + + E+EKEK+KGVEG +LD+LLQRLPGCVSRDLIDQLTV +FCYLNSKS+RK+L
Sbjct: 426 KESEKKADKESEKEKVKGVEGASLDSLLQRLPGCVSRDLIDQLTVVDFCYLNSKSSRKKL 485
Query: 477 VRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKI 536
VR LFNVPR+SLEL+PYYSRM+ATLSTCMKDV+ M++Q+LEEEFNFL+NKKDQMNIETKI
Sbjct: 486 VRTLFNVPRSSLELIPYYSRMIATLSTCMKDVAPMILQLLEEEFNFLMNKKDQMNIETKI 545
Query: 537 RNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRM 596
RNIRF+GEL KFK+A GL+FSCLK+CLDDFTHHNIDVACNLLETCGRFLYR PETS+RM
Sbjct: 546 RNIRFLGELAKFKVASPGLIFSCLKSCLDDFTHHNIDVACNLLETCGRFLYRFPETSLRM 605
Query: 597 ANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLD 656
NMLEI+MRLKNVKNLD RH TLVENAYY CKPPERSARVSKVRPPLHQYIRKLLF+DLD
Sbjct: 606 GNMLEIIMRLKNVKNLDARHSTLVENAYYQCKPPERSARVSKVRPPLHQYIRKLLFADLD 665
Query: 657 KSSIEHVLRQLRKLPWSDCESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVV 716
K++IE VLRQLRKLPWS+CE+YLLKCFMKV+KGKY Q+HLIASLTAGLSRYHD FAV+VV
Sbjct: 666 KTTIERVLRQLRKLPWSECETYLLKCFMKVYKGKYSQVHLIASLTAGLSRYHDAFAVSVV 725
Query: 717 DEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHGTAE 775
DEVLE IR+GLELN+YGMQQRR+A+MRFLGELY+Y +DS VIFDTLYLI+ FGHGT+E
Sbjct: 726 DEVLEAIRVGLELNEYGMQQRRIAYMRFLGELYSYRLIDSPVIFDTLYLIIFFGHGTSE 784
>gi|3402679|gb|AAC28982.1| unknown protein [Arabidopsis thaliana]
Length = 1029
Score = 984 bits (2545), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/673 (75%), Positives = 585/673 (86%), Gaps = 30/673 (4%)
Query: 104 MKKRSTLKLLLELYFIGIIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQGRI 163
MKKRSTLKLLLELY++G+IEDS+IFINIIKDLTS+E LKDRDTTQTNLTLL SFARQGRI
Sbjct: 1 MKKRSTLKLLLELYYVGVIEDSNIFINIIKDLTSVEQLKDRDTTQTNLTLLTSFARQGRI 60
Query: 164 FLGLPLSGPGQEIYEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENEN 223
FLGLP+SG ++ GL++TADQKK FKKAF+TYY+A+ +LLQ+EH L QME EN
Sbjct: 61 FLGLPISGQDED-------GLDVTADQKKSFKKAFNTYYDALADLLQSEHKLLLQMEKEN 113
Query: 224 AKILNAKGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGED 283
AK++NAKGELSE+++SSYEKLRKSYDHLYRN+SSLAEALDMQPPVMPED TTR+T+G++
Sbjct: 114 AKLVNAKGELSEDSASSYEKLRKSYDHLYRNISSLAEALDMQPPVMPED-GTTRLTAGDE 172
Query: 284 ASPASG-KDSSVPEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPT 342
ASP+ KD+SVPEP+WDDE+T+ FYECLPDLRAFVPAVLLGEAE K+NE S K E+ +
Sbjct: 173 ASPSGTVKDTSVPEPIWDDEDTKTFYECLPDLRAFVPAVLLGEAEPKSNEQSAKAKEKLS 232
Query: 343 DPASEPDQGQLAAQDTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKE 402
+ +SE + Q +DT EVSAD AS + +S A+ P +++
Sbjct: 233 ESSSEVVENQQTTEDTTEVSAD-SASMDDRS-------------NAEQPKEKE------- 271
Query: 403 EKDKEKAKDPDKEKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTV 462
E +KEKAKD KEKGKEKD+E+K+E EKEK K ++ N + LLQRLPGCVSRDLIDQLTV
Sbjct: 272 EVEKEKAKDTKKEKGKEKDSEKKMEHEKEKGKSLDVANFERLLQRLPGCVSRDLIDQLTV 331
Query: 463 EFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNF 522
E+CYLNSK+NRK+LV+ALFNVPRTSLELL YYSRMVATL++CMKD+ SML+QMLE+EFN
Sbjct: 332 EYCYLNSKTNRKKLVKALFNVPRTSLELLAYYSRMVATLASCMKDIPSMLVQMLEDEFNS 391
Query: 523 LINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETC 582
L++KKDQMNIETKIRNIRFIGELCKFKI PAGLVFSCLKACLD+FTHHNIDVACNLLETC
Sbjct: 392 LVHKKDQMNIETKIRNIRFIGELCKFKIVPAGLVFSCLKACLDEFTHHNIDVACNLLETC 451
Query: 583 GRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPP 642
GRFLYRSPET++RM NML+ILMRLKNVKNLDPR TLVENAYYLCKPPERSAR+SKVRPP
Sbjct: 452 GRFLYRSPETTLRMTNMLDILMRLKNVKNLDPRQSTLVENAYYLCKPPERSARISKVRPP 511
Query: 643 LHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCESYLLKCFMKVHKGKYGQIHLIASLTA 702
LHQY+RKLLFSDLDK SI +VL+QLRKLPWS+CE Y+LKCFMKVHKGKYGQIHLIASLT+
Sbjct: 512 LHQYVRKLLFSDLDKDSIANVLKQLRKLPWSECEQYILKCFMKVHKGKYGQIHLIASLTS 571
Query: 703 GLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDT 762
GLSR+HDEF VAVVDEVLEEIR+GLELN+YG QQ+RLAHMRFLGELYNYEHVDSSVIF+T
Sbjct: 572 GLSRHHDEFVVAVVDEVLEEIRVGLELNEYGAQQKRLAHMRFLGELYNYEHVDSSVIFET 631
Query: 763 LYLILVFGHGTAE 775
LYL L++GH T+E
Sbjct: 632 LYLTLLYGHDTSE 644
>gi|302799390|ref|XP_002981454.1| hypothetical protein SELMODRAFT_154507 [Selaginella moellendorffii]
gi|300150994|gb|EFJ17642.1| hypothetical protein SELMODRAFT_154507 [Selaginella moellendorffii]
Length = 1142
Score = 969 bits (2505), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/716 (64%), Positives = 574/716 (80%), Gaps = 34/716 (4%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
+++CSLLHQRYKDF+P L+ GLLKVF PGK+GE+LD+DR+ +AM+KRSTLKLL+ELY G
Sbjct: 88 VQVCSLLHQRYKDFAPNLVQGLLKVFLPGKAGEELDSDRSSRAMRKRSTLKLLMELYVCG 147
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQGRIFLGLPLSGPGQEIYEEF 180
+ ED+ IF++I+KDLTS +HL+DR+ TQTNL+LL +F RQGR LGLPL P + EEF
Sbjct: 148 VTEDAGIFVSIVKDLTSSDHLRDREATQTNLSLLVAFTRQGRFLLGLPLGSPDSQ--EEF 205
Query: 181 FKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSS 240
+K +N + D KK KK ++Y++ LLQ+EH +LRQ+E+ENA++LNAKGELSEEN++S
Sbjct: 206 YKEINASQDHKKQLKKMIQSFYDSAVFLLQSEHAALRQIEHENARMLNAKGELSEENAAS 265
Query: 241 YEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGED-ASPASGKDSSVPEPVW 299
YEK+RKSYDHL+R++SSLAEA+D+QPPVMPED HTTR+++GE+ AS +GK+ + EP+W
Sbjct: 266 YEKMRKSYDHLFRSISSLAEAMDIQPPVMPEDAHTTRLSAGEEGASSPAGKEPASVEPIW 325
Query: 300 DDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTA 359
DDE+TR FYE LPDLRAFVPAVLLGE+E K+ E K EQ SE ++
Sbjct: 326 DDEDTRLFYESLPDLRAFVPAVLLGESESKSGES--KTPEQEVRADSELGTAEVHVPSNE 383
Query: 360 EVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKE 419
+A PE K+P+ EK + K+K++ + E ++
Sbjct: 384 AENASGEVVPE-----------------EKNPNSEKAREKEKDKDEPESSR--------- 417
Query: 420 KDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRA 479
+ K +++ +G NLD+LLQRLPG VSRDLIDQLTV+FCY+NSKSNRK+LVR
Sbjct: 418 ---KEKEHEKEKWKSFGDGGNLDSLLQRLPGAVSRDLIDQLTVDFCYVNSKSNRKKLVRT 474
Query: 480 LFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNI 539
LFNVPRTSLELLP+YSRMVATLSTCMKD++ ML+Q+LE+EFNFLINKKDQMNIETKI+NI
Sbjct: 475 LFNVPRTSLELLPHYSRMVATLSTCMKDITPMLLQLLEDEFNFLINKKDQMNIETKIKNI 534
Query: 540 RFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANM 599
RF+GEL KF++AP+ L+F+CLK+CLDDF+HHNIDVACNLLETCGRFLYRSPETS+RM NM
Sbjct: 535 RFLGELAKFRVAPSTLIFTCLKSCLDDFSHHNIDVACNLLETCGRFLYRSPETSVRMGNM 594
Query: 600 LEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSS 659
L+I+MRLKNVKNLD RH TLVENAYY C+PPERSARVSKVRP LHQYIRKLLF DLDKSS
Sbjct: 595 LDIIMRLKNVKNLDARHSTLVENAYYQCRPPERSARVSKVRPLLHQYIRKLLFLDLDKSS 654
Query: 660 IEHVLRQLRKLPWSDCESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEV 719
IE +LRQLRK+PW +CE Y+LKCFMKVHK KY Q+HL+ASLTAGL+RYHD FAVAVVDEV
Sbjct: 655 IERILRQLRKMPWDECEDYVLKCFMKVHKIKYNQVHLVASLTAGLNRYHDSFAVAVVDEV 714
Query: 720 LEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHGTAE 775
LEEIR+GLE N+YGMQQRR+ MRFLGELYNY +DS VIF+TLYLI+ +GHGT E
Sbjct: 715 LEEIRVGLEQNEYGMQQRRIVFMRFLGELYNYRLIDSCVIFETLYLIIFYGHGTPE 770
>gi|302773133|ref|XP_002969984.1| hypothetical protein SELMODRAFT_440923 [Selaginella moellendorffii]
gi|300162495|gb|EFJ29108.1| hypothetical protein SELMODRAFT_440923 [Selaginella moellendorffii]
Length = 1180
Score = 964 bits (2492), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/724 (64%), Positives = 576/724 (79%), Gaps = 43/724 (5%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
+++CSLLHQRYKDF+P L+ GLLKVF PGK+GE+LD+DR+ +AM+KRSTLKLL+ELY G
Sbjct: 119 VQVCSLLHQRYKDFAPNLVQGLLKVFLPGKAGEELDSDRSSRAMRKRSTLKLLMELYVCG 178
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQGRIFLGLPLSGP-GQEIYEE 179
+ ED+ IF++I+KDLTS +HL+DR+ TQTNL+LL +F RQGR LGLPL GP GQ EE
Sbjct: 179 VTEDAGIFVSIVKDLTSSDHLRDREATQTNLSLLVAFTRQGRFLLGLPLGGPDGQ---EE 235
Query: 180 FFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSS 239
F+K +N + D KK KK ++Y++ LLQ+EH +LRQ+E+ENA++LNAKGELSEEN++
Sbjct: 236 FYKEINASQDHKKQLKKMIQSFYDSAVFLLQSEHAALRQIEHENARMLNAKGELSEENAA 295
Query: 240 SYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGED-ASPASGKDSSVPEPV 298
SYEK+RKSYDHL+R++SSLAEA+D+QPPVMPED HTTR+++GE+ AS +GK+ + EP+
Sbjct: 296 SYEKMRKSYDHLFRSISSLAEAMDIQPPVMPEDAHTTRLSAGEEGASSPAGKEPASVEPI 355
Query: 299 WDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDT 358
WDDE+TR FYE LPDLRAFVPAVLLGE+E KA E K EQ SE ++
Sbjct: 356 WDDEDTRLFYEGLPDLRAFVPAVLLGESESKAGES--KTPEQEVRADSELGTPEVHVPSN 413
Query: 359 AEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGK 418
+A PE K+P+ EK + K+K++ + E ++ + + +
Sbjct: 414 EAENASGEVVPE-----------------EKNPNSEKAREKEKDKDEPESSRKEKEHEKE 456
Query: 419 EKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVR 478
+ T +G NLD+LLQRLPG VSRDLIDQLTV+FCY+NSKSNRK+LVR
Sbjct: 457 KWKT------------FGDGGNLDSLLQRLPGAVSRDLIDQLTVDFCYVNSKSNRKKLVR 504
Query: 479 ALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRN 538
LFNVPRTSLELLP+YSRMVATLSTCMKD++ ML+Q+LE+EFNFLINKKDQMNIETKI+N
Sbjct: 505 TLFNVPRTSLELLPHYSRMVATLSTCMKDITPMLLQLLEDEFNFLINKKDQMNIETKIKN 564
Query: 539 IRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMAN 598
IRF+GEL KF++AP+ L+F+CLK+CLDDF+HHNIDVACNLLETCGRFLYRSPETS+RM N
Sbjct: 565 IRFLGELAKFRVAPSTLIFTCLKSCLDDFSHHNIDVACNLLETCGRFLYRSPETSVRMGN 624
Query: 599 MLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLH-------QYIRKLL 651
ML+I+MRLKNVKNLD RH TLVENAYY C+PPERSARVSKVRP LH QYIRKLL
Sbjct: 625 MLDIIMRLKNVKNLDARHSTLVENAYYQCRPPERSARVSKVRPLLHQRMWSSLQYIRKLL 684
Query: 652 FSDLDKSSIEHVLRQLRKLPWSDCESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEF 711
F DLDKSSIE +LRQLRK+PW +CE Y+LKCFMKVHK KY Q+HL+ASLTAGL+RYHD F
Sbjct: 685 FLDLDKSSIERILRQLRKMPWDECEDYVLKCFMKVHKIKYNQVHLVASLTAGLNRYHDSF 744
Query: 712 AVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
AVAVVDEVLEEIR+GLE N+YGMQQRR+ MRFLGELYNY +DS VIF+TLYLI+ +GH
Sbjct: 745 AVAVVDEVLEEIRVGLEQNEYGMQQRRIVFMRFLGELYNYRLIDSCVIFETLYLIIFYGH 804
Query: 772 GTAE 775
GT E
Sbjct: 805 GTPE 808
>gi|413923151|gb|AFW63083.1| hypothetical protein ZEAMMB73_018066 [Zea mays]
Length = 891
Score = 794 bits (2051), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/518 (74%), Positives = 440/518 (84%), Gaps = 25/518 (4%)
Query: 258 LAEALDMQPPVMPEDVHTTRVTSGEDASPASGKDSSVPEPVWDDEETRAFYECLPDLRAF 317
LAE+LDMQPPVMP+D +TTRVT+G DA P+SGK+SS EP+WDDE+T+AFYE LPDLRAF
Sbjct: 13 LAESLDMQPPVMPDDGNTTRVTTGTDALPSSGKESSALEPIWDDEDTKAFYESLPDLRAF 72
Query: 318 VPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTAEVSADLGASPEGKSVEKG 377
VPAVLLGE E K+NE VK E L+ + T+E +L + + E+
Sbjct: 73 VPAVLLGEVEPKSNEQHVKGRE-------------LSGESTSEQETELHDNVPTSATER- 118
Query: 378 KDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEKDTERKVETEKEKLKGVE 437
+ + K D KE E++DKEK KD +KEK KEKD ++K E EKEK + ++
Sbjct: 119 -----QLEVKVDDLVKES------EDRDKEKGKDGEKEKSKEKDLDKKNEREKEKGRVLD 167
Query: 438 GTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRM 497
G +LD LLQRLPGCVSRDLIDQLTVEFCYLNSK+NRK+LVRALFNV RTSLELLPYYSR+
Sbjct: 168 GASLDNLLQRLPGCVSRDLIDQLTVEFCYLNSKANRKKLVRALFNVNRTSLELLPYYSRL 227
Query: 498 VATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVF 557
VATLSTCMKDV SML+ MLEEEFNFLINKKDQ+NIETKI+NIRFIGELCKFK+AP LVF
Sbjct: 228 VATLSTCMKDVPSMLLSMLEEEFNFLINKKDQINIETKIKNIRFIGELCKFKMAPPALVF 287
Query: 558 SCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHV 617
SCLKACLDDF+HHNIDVACNLLETCGRFLYRSPET+IRMANMLEILMRLKNVKNLD RH
Sbjct: 288 SCLKACLDDFSHHNIDVACNLLETCGRFLYRSPETTIRMANMLEILMRLKNVKNLDSRHS 347
Query: 618 TLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCES 677
TLVENAYYLCKPPERSAR+SKVRPPLHQYIRKLLFSDLDKSS+EHVLRQLRKLPW++C+
Sbjct: 348 TLVENAYYLCKPPERSARISKVRPPLHQYIRKLLFSDLDKSSVEHVLRQLRKLPWAECQQ 407
Query: 678 YLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQR 737
YLLKCF+KVHKGKY Q+HLIA LTA LSRYHD+FAV+VVDEVLEEIR+GLELNDYGMQQR
Sbjct: 408 YLLKCFLKVHKGKYSQVHLIALLTASLSRYHDDFAVSVVDEVLEEIRVGLELNDYGMQQR 467
Query: 738 RLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHGTAE 775
RLAHMRFLGELY+Y+H+DSSV+FDTLYLI+VFGHGT E
Sbjct: 468 RLAHMRFLGELYSYKHIDSSVVFDTLYLIIVFGHGTPE 505
>gi|224100875|ref|XP_002312048.1| predicted protein [Populus trichocarpa]
gi|222851868|gb|EEE89415.1| predicted protein [Populus trichocarpa]
Length = 638
Score = 652 bits (1681), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 306/327 (93%), Positives = 321/327 (98%)
Query: 449 PGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDV 508
PGCVSRDLIDQLTV+FCYLNSKS+RK+LVRALFNVPRTSLELLPYYSRMVATLSTCMKDV
Sbjct: 1 PGCVSRDLIDQLTVDFCYLNSKSSRKKLVRALFNVPRTSLELLPYYSRMVATLSTCMKDV 60
Query: 509 SSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFT 568
SSML+Q+LEEEFNFLINKKDQMNIETKIRNIRFIGELCKF+IAPA VFSCLKACLDDFT
Sbjct: 61 SSMLLQLLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFRIAPASTVFSCLKACLDDFT 120
Query: 569 HHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCK 628
HHNIDVACNLLETCGRFLYR+PET++RMANMLEILMRLKNVKNLDPRH TLVENAYYLCK
Sbjct: 121 HHNIDVACNLLETCGRFLYRTPETTVRMANMLEILMRLKNVKNLDPRHSTLVENAYYLCK 180
Query: 629 PPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCESYLLKCFMKVHK 688
PPERSARVSKVRPPL+QYIRKLLFSDLDKSSIEHVLRQLRKLPWS+CE+YLLKCFMKVHK
Sbjct: 181 PPERSARVSKVRPPLYQYIRKLLFSDLDKSSIEHVLRQLRKLPWSECEAYLLKCFMKVHK 240
Query: 689 GKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGEL 748
GKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRR+AHMRFLGEL
Sbjct: 241 GKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRIAHMRFLGEL 300
Query: 749 YNYEHVDSSVIFDTLYLILVFGHGTAE 775
YNYEHVDSSVIF+TLY IL+FGH T E
Sbjct: 301 YNYEHVDSSVIFETLYWILMFGHDTPE 327
>gi|440803820|gb|ELR24703.1| MIF4G domain containing protein [Acanthamoeba castellanii str.
Neff]
Length = 1361
Score = 576 bits (1484), Expect = e-161, Method: Compositional matrix adjust.
Identities = 324/725 (44%), Positives = 437/725 (60%), Gaps = 89/725 (12%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVF-FPGKSGEDLDADRNLKAMKKRSTLKLLLELYFI 119
+ +CSL+HQRY DF+ L+ L+K + PGK+ ++D R KKR L+LL ELY
Sbjct: 317 VHVCSLMHQRYGDFARHLVPALVKSYDLPGKT--EVDTVR-----KKRVVLRLLCELYLA 369
Query: 120 GIIEDSSIFINIIKDLTSI---EHLKDR----DTTQTNLTLLASFARQ-GRIFLGLPLSG 171
G+ D ++ I+I++DL + E DR +T Q +L L+ SF R G LG+ +
Sbjct: 370 GVYTDITVLISIVRDLVNTNGAEFKGDREHFVNTFQNHLMLVVSFTRVIGDEVLGI-VPE 428
Query: 172 PGQEIYEEFFKGLNITA--DQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNA 229
Q + E L+ TA +QK +Y A ELL EH SLR E EN K+L
Sbjct: 429 KHQFVQAEPLPPLDDTATPEQKDRLTVMVKNFYKASGELLVEEHKSLRAKERENNKVLQT 488
Query: 230 KGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPAS- 288
+GELSE + + Y+K+RKSYD L NV++ AE LD + P +PE+ TTR+ +
Sbjct: 489 RGELSETDKAIYDKMRKSYDKLQNNVAAFAELLDEELPALPEEDTTTRIVVADSTQTNKL 548
Query: 289 GKDSSVPEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEP 348
G + EP+W+DE+TR+FYE LP LR +PAVL G+++ D A E
Sbjct: 549 GARTQEVEPIWNDEDTRSFYEDLPQLRVLLPAVLFGDSKK--------------DEAEEK 594
Query: 349 DQGQLAAQDTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEK 408
+ A V+ D KEKE A E G D K
Sbjct: 595 E---------AAVTTD------------------KEKEGAT----ETTPGGDAGGAKKAT 623
Query: 409 AKDPDKEKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLN 468
A + KEK E+EK+ V G L+ LL RLP CV+RDLID+ ++FCY+N
Sbjct: 624 AVEDSATAAKEK--------EEEKM-SVGGVTLEELLHRLPNCVNRDLIDKAAIDFCYIN 674
Query: 469 SKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKD 528
+K NRK+L++ LFN PRT L LLPYY+R+VATL+ CMKD+ L+ MLEEEFN+ + KKD
Sbjct: 675 TKGNRKKLIKTLFNAPRTQLALLPYYARLVATLNQCMKDIGPALVAMLEEEFNYFMRKKD 734
Query: 529 QMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYR 588
QM IETK++NIRF+GEL KF++ P L+F+CLK CLDDF HHNI+VAC LL+ CGRFLYR
Sbjct: 735 QMMIETKLKNIRFLGELVKFRVCPLHLIFNCLKECLDDFLHHNIEVACALLDQCGRFLYR 794
Query: 589 SPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIR 648
+PET +R NML+I+MRLK KNLD R VENAYY C PPER AR K PP+ QY
Sbjct: 795 NPETHVRAKNMLDIMMRLKGSKNLDNRLANNVENAYYQCIPPERPARKEKTIPPMVQYTH 854
Query: 649 KLLFSDLDKSSIEHVLRQLRKLPWSDCESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYH 708
KL+++DL++ +++++L+QLRKLPW E+ +L F+K+HKGKYG IH++ASL A LS+YH
Sbjct: 855 KLVYNDLNRHTVKNILKQLRKLPWDTEEAQILDTFVKIHKGKYGNIHVVASLAAALSQYH 914
Query: 709 DEFAVAVVDEVLEEIRLGLELN-DYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLIL 767
D +G +LN D+ QQRR+A +++LGELYNY ++S IF LYL+L
Sbjct: 915 DV--------------MGTKLNPDFKYQQRRVAEVKYLGELYNYRLIESGTIFYALYLLL 960
Query: 768 VFGHG 772
G
Sbjct: 961 NHAAG 965
>gi|156400766|ref|XP_001638963.1| predicted protein [Nematostella vectensis]
gi|156226088|gb|EDO46900.1| predicted protein [Nematostella vectensis]
Length = 1061
Score = 490 bits (1262), Expect = e-135, Method: Compositional matrix adjust.
Identities = 289/730 (39%), Positives = 422/730 (57%), Gaps = 72/730 (9%)
Query: 63 ICSLLHQRYKDFSPCLIDGLLKVF--FPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
ICSL HQRY++FS L L+KVF + GK D DR + R TL+LL EL G
Sbjct: 68 ICSLFHQRYQEFSDLLKKELVKVFENYAGK-----DEDRAANVTRYRVTLRLLGELILYG 122
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGLPLSGPGQEIYEE 179
+ E+ + I ++ + + D+++ + ++ SFA+ G F G+ LS + + E+
Sbjct: 123 VFENLNENIKLLGGILNNIANCDKES-HIYVQVIISFAKHCGEDFAGV-LSRKHRALVEK 180
Query: 180 F-----FKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELS 234
+ G+ I D + F+ +YY + + L H L+ E +N +IL KGEL
Sbjct: 181 HNITWPYTGI-IPRDAQASFRHLLQSYYKTLAKHLLQVHKDLQNRERQNRQILLTKGELH 239
Query: 235 EENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPED--VHTTRVTSGEDA-SPASGKD 291
+ S E+ +KSY+ L + S+LA+ LD P +P+D + +S D +P ++
Sbjct: 240 ADKKESLERAQKSYEKLLASTSNLADVLDEDMPDLPQDELIQQCEGSSTVDIFNPFKNQE 299
Query: 292 SSVPEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQG 351
+W+DE+ R FYE L DL+A +P +L E +P G
Sbjct: 300 YDGESGIWEDEDYRVFYENLKDLKASLPGILYKE---------------------DPRTG 338
Query: 352 QLAAQDTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKD 411
+ D+ + S G VE D D+E +E D
Sbjct: 339 SSESLDSVDEKVTDKDSSIGNQVELLDDA-------------------DEELNIEEDFAD 379
Query: 412 PDKEKGKEKDT-------ERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEF 464
DKE +DT +E + ++AL+ +LP CV++D+ID++ ++F
Sbjct: 380 SDKEA---EDTIFCYFFTGADESSESASVVTSGAAAMEALIAKLPTCVNKDMIDEVAMDF 436
Query: 465 CY-LNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFL 523
N+K NRK+L RA+ V RT L+LLP YSR++ATL C+ D+S +++ L+ EF F
Sbjct: 437 MLSCNNKKNRKKLTRAVLTVQRTRLDLLPMYSRLIATLDQCVSDISPEVVKALKGEFRFH 496
Query: 524 INKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCG 583
+ KKDQ+N+E+KI+++RFIGEL KF+I P G CLK L+DF+HHNI++ACNLLE CG
Sbjct: 497 VRKKDQINLESKIKSVRFIGELTKFQIFPKGDALHCLKMLLEDFSHHNIEMACNLLEVCG 556
Query: 584 RFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPL 643
RFLYRSP++ IR N+LE++MR K V+NLD R +T+V+NA+Y C PPER + KVRPP+
Sbjct: 557 RFLYRSPDSHIRTKNLLEVMMRKKAVQNLDGRQLTMVDNAFYYCNPPERQKMMQKVRPPM 616
Query: 644 HQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCES--YLLKCFMKVHKGKYGQIHLIASLT 701
HQYIRKLL+ DL K++ E VLRQ+RKLPW + E Y +KCF+++ KY IH A+L
Sbjct: 617 HQYIRKLLYKDLSKTTTERVLRQIRKLPWDNTEIALYAIKCFIRIWNVKYNSIHCAANLL 676
Query: 702 AGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFD 761
+GLS YH+E A+ +VD VLEEIRLG+E+N + QRR+ +R+LGELYNY V+S VIF+
Sbjct: 677 SGLSAYHEELALFIVDGVLEEIRLGMEVNHPKLNQRRVCCVRYLGELYNYRLVESRVIFN 736
Query: 762 TLYLILVFGH 771
TLY L FG+
Sbjct: 737 TLYSFLTFGN 746
>gi|410918607|ref|XP_003972776.1| PREDICTED: regulator of nonsense transcripts 2-like [Takifugu
rubripes]
Length = 1276
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 295/730 (40%), Positives = 419/730 (57%), Gaps = 74/730 (10%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
+ +CSL HQRY +F+P L+ K F E D+ K R+ L+ + EL +G
Sbjct: 222 VHLCSLFHQRYAEFAPLLLQAWKKHF------EARKEDKAPNVSKLRTDLRFIAELTIVG 275
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGLPLSGPGQEIYEE 179
I D I + L +I DR+T T+++++ SF + G GL + + E+
Sbjct: 276 IFTDKEGLSLIYEQLKNIIGT-DRET-HTHVSVVISFCKHCGDDVAGL-MPRKVKVAAEK 332
Query: 180 FFKGLN----ITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSE 235
F G I+ ++++ F+ Y+ ++ + L+ +H L+ +E +N +IL++KGELSE
Sbjct: 333 FGLGFPPSEIISTEKQQPFQNLLREYFTSLTKHLKKDHRELQNIERQNRRILHSKGELSE 392
Query: 236 ENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPED--VHTTRVTSGEDASPASGKDSS 293
+ YE+ SY L N SLA+ LD P +P+D V + +P D
Sbjct: 393 DRHKQYEEFATSYQKLLANTQSLADLLDENMPELPQDKTVQEDHGPGIDIFTPGKPGDYD 452
Query: 294 VPEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQL 353
+ +W+DE+ R FYE + DL+AFVPA+L K NE S
Sbjct: 453 LEGGIWEDEDARNFYENMVDLKAFVPAILF-----KDNEKS------------------- 488
Query: 354 AAQDTAEVSADLGASPEGKSVEKGKDKEE-KEKEKAKDPDKEKGKGKDKEEK-----DKE 407
+GKDKEE KE ++AKD + + + E D
Sbjct: 489 ---------------------SQGKDKEETKEGKEAKDSGSTTEELELELETLDIADDPI 527
Query: 408 KAKDPDKEKGKEKDTERKVETEKEKLKGVEGTNL----DALLQRLPGCVSRDLIDQLTVE 463
+ + PD+ + +E + E E+E + G++L DA +Q+LP CV+RDLID+ ++
Sbjct: 528 ELEGPDEAENEELAKKLLDEQEQEDEEANTGSHLKLIVDAFIQQLPNCVNRDLIDKAAMD 587
Query: 464 FCY-LNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNF 522
FC +N+KSNR++LVRALF VPR L+LLP+YSR+VATL CM DV+ L ML+ +F F
Sbjct: 588 FCMNMNTKSNRRKLVRALFTVPRQRLDLLPFYSRLVATLHPCMCDVADDLCSMLKGDFRF 647
Query: 523 LINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETC 582
I KKDQ+NIETK + +RFIGEL KFK+ CLK L DFTHH+I++AC LLETC
Sbjct: 648 HIRKKDQINIETKNKTVRFIGELAKFKMFSKTDTLQCLKMLLSDFTHHHIEMACTLLETC 707
Query: 583 GRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPP 642
GRFL+RSPE+ +R + +LE +MR K ++LD R+VT+VENAYY C PP V K RPP
Sbjct: 708 GRFLFRSPESHLRTSVLLEQMMRKKQAQHLDARYVTMVENAYYYCNPPPVEKMVKKKRPP 767
Query: 643 LHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASL 700
L +YIRKLL+ DL K + E VLRQ+RKLPW D E YL+ C + + KY IH +A+L
Sbjct: 768 LQEYIRKLLYKDLSKVTTEKVLRQMRKLPWQDPEVKGYLICCMVNIWNVKYNSIHCVANL 827
Query: 701 TAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIF 760
AGL Y ++ + VVD VLE+IRLG+E+N QRR++ +FLGELYNY V+S+VIF
Sbjct: 828 LAGLVAYQEDVGIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIF 887
Query: 761 DTLYLILVFG 770
TLY + FG
Sbjct: 888 RTLYSFISFG 897
>gi|402879641|ref|XP_003903440.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts 2
[Papio anubis]
Length = 1452
Score = 483 bits (1243), Expect = e-133, Method: Compositional matrix adjust.
Identities = 292/719 (40%), Positives = 419/719 (58%), Gaps = 50/719 (6%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
+ +CSL HQRY DF+P L+ K F E ++ K R+ L+ + EL +G
Sbjct: 403 VHLCSLFHQRYADFAPSLLQVWKKHF------EARKEEKTPNITKLRTDLRFIAELTIVG 456
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGL---PLSGPGQEI 176
I D I + L +I + DR++ T+++++ SF R G GL + ++
Sbjct: 457 IFTDKEGLSLIYEQLKNIIN-ADRES-HTHVSVVISFCRHCGDDIAGLVPRKVKSAAEKF 514
Query: 177 YEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEE 236
F I+ ++++ F+ Y+ ++ + L+ +H L+ E +N +IL++KGELSE+
Sbjct: 515 NLSFPPSEIISPEKQQPFQNLLKEYFTSLTKHLKRDHRELQNTERQNRRILHSKGELSED 574
Query: 237 NSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTS-GEDA-SPASGKDSSV 294
YE+ SY L N SLA+ LD P +P+D T G D +P + +
Sbjct: 575 RHKQYEEFAMSYQKLLANSQSLADLLDENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDL 634
Query: 295 PEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLA 354
+W+DE+ R FYE L DL+AFVPA+L K NE S + E D EP +
Sbjct: 635 EGGIWEDEDARNFYENLIDLKAFVPAILF-----KDNEKSCQNKESNKDDTKEPKE---- 685
Query: 355 AQDTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDK 414
++D EVS SP+ D E + + + D + +G D +A+D K
Sbjct: 686 SKDNKEVS-----SPD--------DLELELENLEINDDTLELEGGD-------EAEDLTK 725
Query: 415 EKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCY-LNSKSNR 473
+ E++ E + + LK + +DA LQ+LP CV+RDLID+ ++FC +N+K+NR
Sbjct: 726 KLLDEQEQEDEEASTGSHLKLI----VDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANR 781
Query: 474 KRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIE 533
K+LVRALF VPR L+LLP+Y+R+VATL CM DV+ L ML +F F + KKDQ+NIE
Sbjct: 782 KKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINIE 841
Query: 534 TKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETS 593
TK + +RFIGEL KFK+ CLK L DF+HH+I++AC LLETCGRFL+RSPE+
Sbjct: 842 TKNKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESH 901
Query: 594 IRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFS 653
+R + +LE +MR K +LD R+VT+VENAYY C PP V K RPPL +Y+RKLL+
Sbjct: 902 LRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYVRKLLYK 961
Query: 654 DLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEF 711
DL K + E VLRQ+RKLPW D E Y++ C + + KY IH +A+L AGL Y ++
Sbjct: 962 DLSKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDV 1021
Query: 712 AVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
+ VVD VLE+IRLG+E+N QRR++ +FLGELYNY V+S+VIF TLY FG
Sbjct: 1022 GIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFG 1080
>gi|332217084|ref|XP_003257685.1| PREDICTED: regulator of nonsense transcripts 2 [Nomascus
leucogenys]
Length = 1272
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 292/717 (40%), Positives = 417/717 (58%), Gaps = 50/717 (6%)
Query: 63 ICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIGII 122
+CSL HQRY DF+P L+ K F E ++ K R+ L+ + EL +GI
Sbjct: 225 LCSLFHQRYADFAPSLLQVWKKHF------EARKEEKTPNITKLRTDLRFIAELTIVGIF 278
Query: 123 EDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGL---PLSGPGQEIYE 178
D I + L SI + DR++ T+++++ SF R G GL + ++
Sbjct: 279 TDKEGLSLIYEQLKSIINA-DRES-HTHVSVVISFCRHCGDDIAGLVPRKVKSAAEKFNL 336
Query: 179 EFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENS 238
F I+ ++++ F+ Y+ ++ + L+ +H L+ E +N +IL++KGELSE+
Sbjct: 337 SFPPSEIISPEKQQPFQNLLKEYFTSLTKHLKRDHRELQNTERQNRRILHSKGELSEDRH 396
Query: 239 SSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTS-GEDA-SPASGKDSSVPE 296
YE+ SY L N SLA+ LD P +P+D T G D +P + +
Sbjct: 397 KQYEEFAMSYQKLLANSQSLADLLDENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDLEG 456
Query: 297 PVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQ 356
+W+DE+ R FYE L DL+AFVPA+L K NE S + E D E + ++
Sbjct: 457 GIWEDEDARNFYENLIDLKAFVPAILF-----KDNEKSCQNKESNKDDTKEAKE----SK 507
Query: 357 DTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEK 416
D EVS SP+ D E + + + D + +G D +A+D K+
Sbjct: 508 DNKEVS-----SPD--------DLELELENLEINDDTLELEGGD-------EAEDLTKKL 547
Query: 417 GKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCY-LNSKSNRKR 475
E++ E + + LK + +DA LQ+LP CV+RDLID+ ++FC +N+K+NRK+
Sbjct: 548 LDEQEQEDEEASTGSHLKLI----VDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANRKK 603
Query: 476 LVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETK 535
LVRALF VPR L+LLP+Y+R+VATL CM DV+ L ML +F F + KKDQ+NIETK
Sbjct: 604 LVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINIETK 663
Query: 536 IRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIR 595
+ +RFIGEL KFK+ CLK L DF+HH+I++AC LLETCGRFL+RSPE+ +R
Sbjct: 664 NKTVRFIGELTKFKMFTKSDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESHLR 723
Query: 596 MANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDL 655
+ +LE +MR K +LD R+VT+VENAYY C PP V K RPPL +Y+RKLL+ DL
Sbjct: 724 TSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYVRKLLYKDL 783
Query: 656 DKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAV 713
K + E VLRQ+RKLPW D E Y++ C + + KY IH +A+L AGL Y ++ +
Sbjct: 784 SKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDVGI 843
Query: 714 AVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
VVD VLE+IRLG+E+N QRR++ +FLGELYNY V+S+VIF TLY FG
Sbjct: 844 HVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFG 900
>gi|332833615|ref|XP_507656.3| PREDICTED: regulator of nonsense transcripts 2 isoform 2 [Pan
troglodytes]
gi|332833617|ref|XP_003312506.1| PREDICTED: regulator of nonsense transcripts 2 isoform 1 [Pan
troglodytes]
Length = 1272
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 291/717 (40%), Positives = 413/717 (57%), Gaps = 50/717 (6%)
Query: 63 ICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIGII 122
+CSL HQRY DF+P L+ K F E ++ K R+ L+ + EL +GI
Sbjct: 225 LCSLFHQRYADFAPSLLQVWKKHF------EARKEEKTPNITKLRTDLRFIAELTIVGIF 278
Query: 123 EDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGL---PLSGPGQEIYE 178
D I + L +I + DR++ T+++++ SF R G GL + ++
Sbjct: 279 TDKEGLSLIYEQLKNIINA-DRES-HTHVSVVISFCRHCGDDIAGLVPRKVKSAAEKFNL 336
Query: 179 EFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENS 238
F I+ ++++ F+ Y+ ++ + L+ +H L+ E +N +IL++KGELSE+
Sbjct: 337 SFPPSEIISPEKQQPFQNLLKEYFTSLTKHLKRDHRELQNTERQNRRILHSKGELSEDRH 396
Query: 239 SSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTS-GEDA-SPASGKDSSVPE 296
YE+ SY L N SLA+ LD P +P+D T G D +P + +
Sbjct: 397 KQYEEFAMSYQKLLANSQSLADLLDENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDLEG 456
Query: 297 PVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQ 356
+W+DE+ R FYE L DL+AFVPA+L K NE S + E D
Sbjct: 457 GIWEDEDARNFYENLIDLKAFVPAILF-----KDNEKSCQNKESNKD------------- 498
Query: 357 DTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEK 416
DT E S E K V D E + + + D + +G D+ A+D K+
Sbjct: 499 DTKETKE----SKENKEVSSPDDLELELENLEINDDTLELEGGDE-------AEDLTKKL 547
Query: 417 GKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCY-LNSKSNRKR 475
E++ E + + LK + +DA LQ+LP CV+RDLID+ ++FC +N+K+NRK+
Sbjct: 548 LDEQEQEDEEASTGSHLKLI----VDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANRKK 603
Query: 476 LVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETK 535
LVRALF VPR L+LLP+Y+R+VATL CM DV+ L ML +F F + KKDQ+NIETK
Sbjct: 604 LVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINIETK 663
Query: 536 IRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIR 595
+ +RFIGEL KFK+ CLK L DF+HH+I++AC LLETCGRFL+RSPE+ +R
Sbjct: 664 NKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESHLR 723
Query: 596 MANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDL 655
+ +LE +MR K +LD R+VT+VENAYY C PP V K RPPL +Y+RKLL+ DL
Sbjct: 724 TSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYVRKLLYKDL 783
Query: 656 DKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAV 713
K + E VLRQ+RKLPW D E Y++ C + + KY IH +A+L AGL Y ++ +
Sbjct: 784 SKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDVGI 843
Query: 714 AVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
VVD VLE+IRLG+E+N QRR++ +FLGELYNY V+S+VIF TLY FG
Sbjct: 844 HVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFG 900
>gi|7243197|dbj|BAA92646.1| KIAA1408 protein [Homo sapiens]
Length = 1298
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 291/717 (40%), Positives = 413/717 (57%), Gaps = 50/717 (6%)
Query: 63 ICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIGII 122
+CSL HQRY DF+P L+ K F E ++ K R+ L+ + EL +GI
Sbjct: 251 LCSLFHQRYADFAPSLLQVWKKHF------EARKEEKTPNITKLRTDLRFIAELTIVGIF 304
Query: 123 EDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGL---PLSGPGQEIYE 178
D I + L +I + DR++ T+++++ SF R G GL + ++
Sbjct: 305 TDKEGLSLIYEQLKNIINA-DRES-HTHVSVVISFCRHCGDDIAGLVPRKVKSAAEKFNL 362
Query: 179 EFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENS 238
F I+ ++++ F+ Y+ ++ + L+ +H L+ E +N +IL++KGELSE+
Sbjct: 363 SFPPSEIISPEKQQPFQNLLKEYFTSLTKHLKRDHRELQNTERQNRRILHSKGELSEDRH 422
Query: 239 SSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTS-GEDA-SPASGKDSSVPE 296
YE+ SY L N SLA+ LD P +P+D T G D +P + +
Sbjct: 423 KQYEEFAMSYQKLLANSQSLADLLDENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDLEG 482
Query: 297 PVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQ 356
+W+DE+ R FYE L DL+AFVPA+L K NE S + E D
Sbjct: 483 GIWEDEDARNFYENLIDLKAFVPAILF-----KDNEKSCQNKESNKD------------- 524
Query: 357 DTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEK 416
DT E S E K V D E + + + D + +G D+ A+D K+
Sbjct: 525 DTKEAKE----SKENKEVSSPDDLELELENLEINDDTLELEGGDE-------AEDLTKKL 573
Query: 417 GKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCY-LNSKSNRKR 475
E++ E + + LK + +DA LQ+LP CV+RDLID+ ++FC +N+K+NRK+
Sbjct: 574 LDEQEQEDEEASTGSHLKLI----VDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANRKK 629
Query: 476 LVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETK 535
LVRALF VPR L+LLP+Y+R+VATL CM DV+ L ML +F F + KKDQ+NIETK
Sbjct: 630 LVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINIETK 689
Query: 536 IRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIR 595
+ +RFIGEL KFK+ CLK L DF+HH+I++AC LLETCGRFL+RSPE+ +R
Sbjct: 690 NKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESHLR 749
Query: 596 MANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDL 655
+ +LE +MR K +LD R+VT+VENAYY C PP V K RPPL +Y+RKLL+ DL
Sbjct: 750 TSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYVRKLLYKDL 809
Query: 656 DKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAV 713
K + E VLRQ+RKLPW D E Y++ C + + KY IH +A+L AGL Y ++ +
Sbjct: 810 SKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDVGI 869
Query: 714 AVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
VVD VLE+IRLG+E+N QRR++ +FLGELYNY V+S+VIF TLY FG
Sbjct: 870 QVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFG 926
>gi|12232320|gb|AAG48509.1| hUPF2 [Homo sapiens]
Length = 1272
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 291/717 (40%), Positives = 413/717 (57%), Gaps = 50/717 (6%)
Query: 63 ICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIGII 122
+CSL HQRY DF+P L+ K F E ++ K R+ L+ + EL +GI
Sbjct: 225 LCSLFHQRYADFAPSLLQVWKKHF------EARKEEKTPNITKLRTDLRFIAELTIVGIF 278
Query: 123 EDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGL---PLSGPGQEIYE 178
D I + L +I + DR++ T+++++ SF R G GL + ++
Sbjct: 279 TDKEGLSLIYEQLKNIINA-DRES-HTHVSVVISFCRHCGDDIAGLVPRKVKSAAEKFNL 336
Query: 179 EFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENS 238
F I+ ++++ F+ Y+ ++ + L+ +H L+ E +N +IL++KGELSE+
Sbjct: 337 SFPPSEIISPEKQQPFQNLLKEYFTSLTKHLKRDHRELQNTERQNRRILHSKGELSEDRH 396
Query: 239 SSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTS-GEDA-SPASGKDSSVPE 296
YE+ SY L N SLA+ LD P +P+D T G D +P + +
Sbjct: 397 KQYEEFAMSYQKLLANSQSLADLLDENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDLEG 456
Query: 297 PVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQ 356
+W+DE+ R FYE L DL+AFVPA+L K NE S + E D
Sbjct: 457 GIWEDEDARNFYENLIDLKAFVPAILF-----KDNEKSCQNKESNKD------------- 498
Query: 357 DTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEK 416
DT E S E K V D E + + + D + +G D+ A+D K+
Sbjct: 499 DTKEAKE----SKENKEVSSPDDLELELENLEINDDTLELEGGDE-------AEDLTKKL 547
Query: 417 GKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCY-LNSKSNRKR 475
E++ E + + LK + +DA LQ+LP CV+RDLID+ ++FC +N+K+NRK+
Sbjct: 548 LDEQEQEDEEASTGSHLKLI----VDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANRKK 603
Query: 476 LVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETK 535
LVRALF VPR L+LLP+Y+R+VATL CM DV+ L ML +F F + KKDQ+NIETK
Sbjct: 604 LVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINIETK 663
Query: 536 IRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIR 595
+ +RFIGEL KFK+ CLK L DF+HH+I++AC LLETCGRFL+RSPE+ +R
Sbjct: 664 NKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESHLR 723
Query: 596 MANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDL 655
+ +LE +MR K +LD R+VT+VENAYY C PP V K RPPL +Y+RKLL+ DL
Sbjct: 724 TSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYVRKLLYKDL 783
Query: 656 DKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAV 713
K + E VLRQ+RKLPW D E Y++ C + + KY IH +A+L AGL Y ++ +
Sbjct: 784 SKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDVGI 843
Query: 714 AVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
VVD VLE+IRLG+E+N QRR++ +FLGELYNY V+S+VIF TLY FG
Sbjct: 844 QVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFG 900
>gi|410253098|gb|JAA14516.1| UPF2 regulator of nonsense transcripts homolog [Pan troglodytes]
Length = 1272
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 291/717 (40%), Positives = 413/717 (57%), Gaps = 50/717 (6%)
Query: 63 ICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIGII 122
+CSL HQRY DF+P L+ K F E ++ K R+ L+ + EL +GI
Sbjct: 225 LCSLFHQRYADFAPSLLQVWKKHF------EARKEEKTPNITKLRTDLRFIAELTIVGIF 278
Query: 123 EDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGL---PLSGPGQEIYE 178
D I + L +I + DR++ T+++++ SF R G GL + ++
Sbjct: 279 TDKEGLSLIYEQLKNIINA-DRES-HTHVSVVISFCRHCGDDIAGLVPRKVKSAAEKFNL 336
Query: 179 EFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENS 238
F I+ ++++ F+ Y+ ++ + L+ +H L+ E +N +IL++KGELSE+
Sbjct: 337 SFPPSEIISPEKQQPFQNLLKEYFTSLTKHLKRDHRELQNTERQNRRILHSKGELSEDRH 396
Query: 239 SSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTS-GEDA-SPASGKDSSVPE 296
YE+ SY L N SLA+ LD P +P+D T G D +P + +
Sbjct: 397 KQYEEFAMSYQKLLANSQSLADLLDENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDLEG 456
Query: 297 PVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQ 356
+W+DE+ R FYE L DL+AFVPA+L K NE S + E D
Sbjct: 457 GIWEDEDARNFYENLIDLKAFVPAILF-----KDNEKSCQNKESNKD------------- 498
Query: 357 DTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEK 416
DT E S E K V D E + + + D + +G D+ A+D K+
Sbjct: 499 DTKEAKE----SKENKEVSSPDDLELELENLEINDDTLELEGGDE-------AEDLTKKL 547
Query: 417 GKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCY-LNSKSNRKR 475
E++ E + + LK + +DA LQ+LP CV+RDLID+ ++FC +N+K+NRK+
Sbjct: 548 LDEQEQEDEEASTGSHLKLI----VDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANRKK 603
Query: 476 LVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETK 535
LVRALF VPR L+LLP+Y+R+VATL CM DV+ L ML +F F + KKDQ+NIETK
Sbjct: 604 LVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINIETK 663
Query: 536 IRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIR 595
+ +RFIGEL KFK+ CLK L DF+HH+I++AC LLETCGRFL+RSPE+ +R
Sbjct: 664 NKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESHLR 723
Query: 596 MANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDL 655
+ +LE +MR K +LD R+VT+VENAYY C PP V K RPPL +Y+RKLL+ DL
Sbjct: 724 TSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYVRKLLYKDL 783
Query: 656 DKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAV 713
K + E VLRQ+RKLPW D E Y++ C + + KY IH +A+L AGL Y ++ +
Sbjct: 784 SKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDVGI 843
Query: 714 AVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
VVD VLE+IRLG+E+N QRR++ +FLGELYNY V+S+VIF TLY FG
Sbjct: 844 HVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFG 900
>gi|11693132|ref|NP_056357.1| regulator of nonsense transcripts 2 [Homo sapiens]
gi|18375676|ref|NP_542166.1| regulator of nonsense transcripts 2 [Homo sapiens]
gi|60390647|sp|Q9HAU5.1|RENT2_HUMAN RecName: Full=Regulator of nonsense transcripts 2; AltName:
Full=Nonsense mRNA reducing factor 2; AltName:
Full=Up-frameshift suppressor 2 homolog; Short=hUpf2
gi|11228926|gb|AAG33225.1|AF301013_1 regulator of nonsense transcripts 2 [Homo sapiens]
gi|12620404|gb|AAG60689.1|AF318574_1 UPF2 [Homo sapiens]
gi|109731814|gb|AAI14965.1| UPF2 regulator of nonsense transcripts homolog (yeast) [Homo
sapiens]
gi|109732272|gb|AAI15738.1| UPF2 regulator of nonsense transcripts homolog (yeast) [Homo
sapiens]
gi|119606734|gb|EAW86328.1| UPF2 regulator of nonsense transcripts homolog (yeast), isoform
CRA_a [Homo sapiens]
gi|119606735|gb|EAW86329.1| UPF2 regulator of nonsense transcripts homolog (yeast), isoform
CRA_a [Homo sapiens]
gi|119606736|gb|EAW86330.1| UPF2 regulator of nonsense transcripts homolog (yeast), isoform
CRA_a [Homo sapiens]
gi|119606738|gb|EAW86332.1| UPF2 regulator of nonsense transcripts homolog (yeast), isoform
CRA_a [Homo sapiens]
gi|119606739|gb|EAW86333.1| UPF2 regulator of nonsense transcripts homolog (yeast), isoform
CRA_a [Homo sapiens]
gi|208965670|dbj|BAG72849.1| UPF2 regulator of nonsense transcripts homolog [synthetic
construct]
Length = 1272
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 291/717 (40%), Positives = 413/717 (57%), Gaps = 50/717 (6%)
Query: 63 ICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIGII 122
+CSL HQRY DF+P L+ K F E ++ K R+ L+ + EL +GI
Sbjct: 225 LCSLFHQRYADFAPSLLQVWKKHF------EARKEEKTPNITKLRTDLRFIAELTIVGIF 278
Query: 123 EDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGL---PLSGPGQEIYE 178
D I + L +I + DR++ T+++++ SF R G GL + ++
Sbjct: 279 TDKEGLSLIYEQLKNIINA-DRES-HTHVSVVISFCRHCGDDIAGLVPRKVKSAAEKFNL 336
Query: 179 EFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENS 238
F I+ ++++ F+ Y+ ++ + L+ +H L+ E +N +IL++KGELSE+
Sbjct: 337 SFPPSEIISPEKQQPFQNLLKEYFTSLTKHLKRDHRELQNTERQNRRILHSKGELSEDRH 396
Query: 239 SSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTS-GEDA-SPASGKDSSVPE 296
YE+ SY L N SLA+ LD P +P+D T G D +P + +
Sbjct: 397 KQYEEFAMSYQKLLANSQSLADLLDENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDLEG 456
Query: 297 PVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQ 356
+W+DE+ R FYE L DL+AFVPA+L K NE S + E D
Sbjct: 457 GIWEDEDARNFYENLIDLKAFVPAILF-----KDNEKSCQNKESNKD------------- 498
Query: 357 DTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEK 416
DT E S E K V D E + + + D + +G D+ A+D K+
Sbjct: 499 DTKEAKE----SKENKEVSSPDDLELELENLEINDDTLELEGGDE-------AEDLTKKL 547
Query: 417 GKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCY-LNSKSNRKR 475
E++ E + + LK + +DA LQ+LP CV+RDLID+ ++FC +N+K+NRK+
Sbjct: 548 LDEQEQEDEEASTGSHLKLI----VDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANRKK 603
Query: 476 LVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETK 535
LVRALF VPR L+LLP+Y+R+VATL CM DV+ L ML +F F + KKDQ+NIETK
Sbjct: 604 LVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINIETK 663
Query: 536 IRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIR 595
+ +RFIGEL KFK+ CLK L DF+HH+I++AC LLETCGRFL+RSPE+ +R
Sbjct: 664 NKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESHLR 723
Query: 596 MANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDL 655
+ +LE +MR K +LD R+VT+VENAYY C PP V K RPPL +Y+RKLL+ DL
Sbjct: 724 TSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYVRKLLYKDL 783
Query: 656 DKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAV 713
K + E VLRQ+RKLPW D E Y++ C + + KY IH +A+L AGL Y ++ +
Sbjct: 784 SKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDVGI 843
Query: 714 AVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
VVD VLE+IRLG+E+N QRR++ +FLGELYNY V+S+VIF TLY FG
Sbjct: 844 HVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFG 900
>gi|148676029|gb|EDL07976.1| mCG18140 [Mus musculus]
Length = 1268
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 291/717 (40%), Positives = 416/717 (58%), Gaps = 51/717 (7%)
Query: 63 ICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIGII 122
+CSL HQRY DF+P L+ K F E ++ K R+ L+ + EL +GI
Sbjct: 224 LCSLFHQRYSDFAPSLLQVWKKHF------EARKEEKTPNITKLRTDLRFIAELTIVGIF 277
Query: 123 EDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGL---PLSGPGQEIYE 178
D I + L SI + DR++ T+++++ SF R G GL + ++
Sbjct: 278 TDKEGLSLIYEQLKSIINA-DRES-HTHVSVVISFCRHCGDDIAGLVPRKVKSAAEKFNL 335
Query: 179 EFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENS 238
F I+ ++++ F+ Y+ ++ + L+ +H L+ E +N +IL++KGELSE+
Sbjct: 336 SFPPSEIISPEKQQPFQNLLKEYFTSLTKHLKRDHRELQNTERQNRRILHSKGELSEDRH 395
Query: 239 SSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTS-GEDA-SPASGKDSSVPE 296
YE+ SY L N SLA+ LD P +P+D T G D +P + +
Sbjct: 396 KQYEEFAMSYQKLLANSQSLADLLDENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDLEG 455
Query: 297 PVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQ 356
+W+DE+ R FYE L DL+AFVPA+L + E N+ S K + A EP +
Sbjct: 456 GIWEDEDARNFYENLIDLKAFVPAILFKDNEKSQNKDSNK---DDSKEAKEP-------K 505
Query: 357 DTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEK 416
D E S SP+ D E + + + D + +G D+ A+D K+
Sbjct: 506 DNKEAS-----SPD--------DLELELENLEINDDTLELEGADE-------AEDLTKKL 545
Query: 417 GKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCY-LNSKSNRKR 475
E++ E + + LK + +DA LQ+LP CV+RDLID+ ++FC +N+K+NRK+
Sbjct: 546 LDEQEQEDEEASTGSHLKLI----VDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANRKK 601
Query: 476 LVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETK 535
LVRALF VPR L+LLP+Y+R+VATL CM DV+ L ML +F F + KKDQ+NIETK
Sbjct: 602 LVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINIETK 661
Query: 536 IRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIR 595
+ +RFIGEL KFK+ CLK L DF+HH+I++AC LLETCGRFL+RSPE+ +R
Sbjct: 662 NKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESHLR 721
Query: 596 MANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDL 655
+ +LE +MR K +LD R+VT+VENAYY C PP V K RPPL +Y+RKLL+ DL
Sbjct: 722 TSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVRKKRPPLQEYVRKLLYKDL 781
Query: 656 DKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAV 713
K + E VLRQ+RKLPW D E Y++ C + + KY IH +A+L AGL Y ++ +
Sbjct: 782 SKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDVGI 841
Query: 714 AVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
VVD VLE+IRLG+E+N QRR++ +FLGELYNY V+S+VIF TLY FG
Sbjct: 842 HVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFG 898
>gi|380799623|gb|AFE71687.1| regulator of nonsense transcripts 2, partial [Macaca mulatta]
Length = 1170
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 291/719 (40%), Positives = 418/719 (58%), Gaps = 50/719 (6%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
+ +CSL HQRY DF+P L+ K F E ++ K R+ L+ + EL +G
Sbjct: 121 VHLCSLFHQRYADFAPSLLQVWKKHF------EARKEEKTPNITKLRTDLRFIAELTIVG 174
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGL---PLSGPGQEI 176
I D I + L +I + DR++ T+++++ SF R G GL + ++
Sbjct: 175 IFTDKEGLSLIYEQLKNIIN-ADRES-HTHVSVVISFCRHCGDDIAGLVPRKVKSAAEKF 232
Query: 177 YEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEE 236
F I+ ++++ F+ Y+ ++ + L+ +H L+ E +N +IL++KGELSE+
Sbjct: 233 NLSFPPSEIISPEKQQPFQNLLKEYFTSLTKHLKRDHRELQNTERQNRRILHSKGELSED 292
Query: 237 NSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTS-GEDA-SPASGKDSSV 294
YE+ SY L N SLA+ LD P +P+D T G D +P + +
Sbjct: 293 RHKQYEEFAMSYQKLLANSQSLADLLDENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDL 352
Query: 295 PEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLA 354
+W+DE+ R FYE L DL+AFVPA+L K NE S + E D E +
Sbjct: 353 EGGIWEDEDARNFYENLIDLKAFVPAILF-----KDNEKSCQNKESNKDDTKEAKE---- 403
Query: 355 AQDTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDK 414
++D EVS SP+ D E + + + D + +G D +A+D K
Sbjct: 404 SKDNKEVS-----SPD--------DLELELENLEINDDTLELEGGD-------EAEDLTK 443
Query: 415 EKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCY-LNSKSNR 473
+ E++ E + + LK + +DA LQ+LP CV+RDLID+ ++FC +N+K+NR
Sbjct: 444 KLLDEQEQEDEEASTGSHLKLI----VDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANR 499
Query: 474 KRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIE 533
K+LVRALF VPR L+LLP+Y+R+VATL CM DV+ L ML +F F + KKDQ+NIE
Sbjct: 500 KKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINIE 559
Query: 534 TKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETS 593
TK + +RFIGEL KFK+ CLK L DF+HH+I++AC LLETCGRFL+RSPE+
Sbjct: 560 TKNKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESH 619
Query: 594 IRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFS 653
+R + +LE +MR K +LD R+VT+VENAYY C PP V K RPPL +Y+RKLL+
Sbjct: 620 LRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYVRKLLYK 679
Query: 654 DLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEF 711
DL K + E VLRQ+RKLPW D E Y++ C + + KY IH +A+L AGL Y ++
Sbjct: 680 DLSKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDV 739
Query: 712 AVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
+ VVD VLE+IRLG+E+N QRR++ +FLGELYNY V+S+VIF TLY FG
Sbjct: 740 GIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFG 798
>gi|124487283|ref|NP_001074601.1| regulator of nonsense transcripts 2 [Mus musculus]
gi|187951027|gb|AAI38359.1| UPF2 regulator of nonsense transcripts homolog (yeast) [Mus
musculus]
gi|187951927|gb|AAI38360.1| UPF2 regulator of nonsense transcripts homolog (yeast) [Mus
musculus]
Length = 1269
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 291/717 (40%), Positives = 416/717 (58%), Gaps = 51/717 (7%)
Query: 63 ICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIGII 122
+CSL HQRY DF+P L+ K F E ++ K R+ L+ + EL +GI
Sbjct: 224 LCSLFHQRYSDFAPSLLQVWKKHF------EARKEEKTPNITKLRTDLRFIAELTIVGIF 277
Query: 123 EDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGL---PLSGPGQEIYE 178
D I + L SI + DR++ T+++++ SF R G GL + ++
Sbjct: 278 TDKEGLSLIYEQLKSIINA-DRES-HTHVSVVISFCRHCGDDIAGLVPRKVKSAAEKFNL 335
Query: 179 EFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENS 238
F I+ ++++ F+ Y+ ++ + L+ +H L+ E +N +IL++KGELSE+
Sbjct: 336 SFPPSEIISPEKQQPFQNLLKEYFTSLTKHLKRDHRELQNTERQNRRILHSKGELSEDRH 395
Query: 239 SSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTS-GEDA-SPASGKDSSVPE 296
YE+ SY L N SLA+ LD P +P+D T G D +P + +
Sbjct: 396 KQYEEFAMSYQKLLANSQSLADLLDENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDLEG 455
Query: 297 PVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQ 356
+W+DE+ R FYE L DL+AFVPA+L + E N+ S K + A EP +
Sbjct: 456 GIWEDEDARNFYENLIDLKAFVPAILFKDNEKSQNKDSNK---DDSKEAKEP-------K 505
Query: 357 DTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEK 416
D E S SP+ D E + + + D + +G D+ A+D K+
Sbjct: 506 DNKEAS-----SPD--------DLELELENLEINDDTLELEGADE-------AEDLTKKL 545
Query: 417 GKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCY-LNSKSNRKR 475
E++ E + + LK + +DA LQ+LP CV+RDLID+ ++FC +N+K+NRK+
Sbjct: 546 LDEQEQEDEEASTGSHLKLI----VDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANRKK 601
Query: 476 LVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETK 535
LVRALF VPR L+LLP+Y+R+VATL CM DV+ L ML +F F + KKDQ+NIETK
Sbjct: 602 LVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINIETK 661
Query: 536 IRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIR 595
+ +RFIGEL KFK+ CLK L DF+HH+I++AC LLETCGRFL+RSPE+ +R
Sbjct: 662 NKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESHLR 721
Query: 596 MANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDL 655
+ +LE +MR K +LD R+VT+VENAYY C PP V K RPPL +Y+RKLL+ DL
Sbjct: 722 TSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVRKKRPPLQEYVRKLLYKDL 781
Query: 656 DKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAV 713
K + E VLRQ+RKLPW D E Y++ C + + KY IH +A+L AGL Y ++ +
Sbjct: 782 SKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDVGI 841
Query: 714 AVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
VVD VLE+IRLG+E+N QRR++ +FLGELYNY V+S+VIF TLY FG
Sbjct: 842 HVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFG 898
>gi|296481536|tpg|DAA23651.1| TPA: UPF2 regulator of nonsense transcripts homolog [Bos taurus]
Length = 1280
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 291/719 (40%), Positives = 418/719 (58%), Gaps = 50/719 (6%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
+ +CSL HQRY DF+P L+ K F E ++ K R+ L+ + EL +G
Sbjct: 231 VHLCSLFHQRYADFAPSLLQVWKKHF------EARKEEKTPNITKLRTDLRFIAELTIVG 284
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGL---PLSGPGQEI 176
I D I + L +I + DR++ T+++++ SF R G GL + ++
Sbjct: 285 IFTDKEGLSLIYEQLKNIIN-ADRES-HTHVSVVISFCRHCGDDIAGLVPRKVKSAAEKF 342
Query: 177 YEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEE 236
F I+ ++++ F+ Y+ ++ + L+ +H L+ E +N +IL++KGELSE+
Sbjct: 343 NLSFPPSEIISPEKQQPFQNLLKEYFTSLTKHLKRDHRELQNTERQNRRILHSKGELSED 402
Query: 237 NSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTS-GEDA-SPASGKDSSV 294
YE+ SY L N SLA+ LD P +P+D T G D +P + +
Sbjct: 403 RHKQYEEFAMSYQKLLANSQSLADLLDENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDL 462
Query: 295 PEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLA 354
+W+DE+ R FYE L DL+AFVPA+L K NE S + E D + E +
Sbjct: 463 EGGIWEDEDARNFYENLIDLKAFVPAILF-----KDNEKSCQNKESSKDDSKETKE---- 513
Query: 355 AQDTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDK 414
+D EVS SP+ D E + + + D + +G D +A+D K
Sbjct: 514 PKDNKEVS-----SPD--------DLELELENLEINDDTLELEGGD-------EAEDLTK 553
Query: 415 EKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCY-LNSKSNR 473
+ E++ E + + LK + +DA LQ+LP CV+RDLID+ ++FC +N+K+NR
Sbjct: 554 KLLDEQEQEDEEASTGSHLKLI----VDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANR 609
Query: 474 KRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIE 533
K+LVRALF VPR L+LLP+Y+R+VATL CM DV+ L ML +F F + KKDQ+NIE
Sbjct: 610 KKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINIE 669
Query: 534 TKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETS 593
TK + +RFIGEL KFK+ CLK L DF+HH+I++AC LLETCGRFL+RSPE+
Sbjct: 670 TKNKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESH 729
Query: 594 IRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFS 653
+R + +LE +MR K +LD R+VT+VENAYY C PP V K RPPL +Y+RKLL+
Sbjct: 730 LRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYVRKLLYK 789
Query: 654 DLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEF 711
DL K + E VLRQ+RKLPW D E Y++ C + + KY IH +A+L AGL Y ++
Sbjct: 790 DLSKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDV 849
Query: 712 AVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
+ VVD VLE+IRLG+E+N QRR++ +FLGELYNY V+S+VIF TLY FG
Sbjct: 850 GIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFG 908
>gi|426240705|ref|XP_004014234.1| PREDICTED: regulator of nonsense transcripts 2 [Ovis aries]
Length = 1271
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 291/717 (40%), Positives = 417/717 (58%), Gaps = 50/717 (6%)
Query: 63 ICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIGII 122
+CSL HQRY DF+P L+ K F E ++ K R+ L+ + EL +GI
Sbjct: 224 LCSLFHQRYADFAPSLLQVWKKHF------EARKEEKTPNITKLRTDLRFIAELTIVGIF 277
Query: 123 EDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGL---PLSGPGQEIYE 178
D I + L +I + DR++ T+++++ SF R G GL + ++
Sbjct: 278 TDKEGLSLIYEQLKNIIN-ADRES-HTHVSVVISFCRHCGDDIAGLVPRKVKSAAEKFNL 335
Query: 179 EFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENS 238
F I+ ++++ F+ Y+ ++ + L+ +H L+ E +N +IL++KGELSE+
Sbjct: 336 SFPPSEIISPEKQQPFQNLLKEYFTSLTKHLKRDHRELQNTERQNRRILHSKGELSEDRH 395
Query: 239 SSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTS-GEDA-SPASGKDSSVPE 296
YE+ SY L N SLA+ LD P +P+D T G D +P + +
Sbjct: 396 KQYEEFAMSYQKLLANSQSLADLLDENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDLEG 455
Query: 297 PVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQ 356
+W+DE+ R FYE L DL+AFVPA+L K NE S + E D + E + +
Sbjct: 456 GIWEDEDARNFYENLIDLKAFVPAILF-----KDNEKSCQNKESSKDDSKETKE----PK 506
Query: 357 DTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEK 416
D EVS SP+ D E + + + D + +G D +A+D K+
Sbjct: 507 DNKEVS-----SPD--------DLELELENLEINDDTLELEGGD-------EAEDLTKKL 546
Query: 417 GKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCY-LNSKSNRKR 475
E++ E + + LK + +DA LQ+LP CV+RDLID+ ++FC +N+K+NRK+
Sbjct: 547 LDEQEQEDEEASTGSHLKLI----VDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANRKK 602
Query: 476 LVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETK 535
LVRALF VPR L+LLP+Y+R+VATL CM DV+ L ML +F F + KKDQ+NIETK
Sbjct: 603 LVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINIETK 662
Query: 536 IRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIR 595
+ +RFIGEL KFK+ CLK L DF+HH+I++AC LLETCGRFL+RSPE+ +R
Sbjct: 663 NKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESHLR 722
Query: 596 MANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDL 655
+ +LE +MR K +LD R+VT+VENAYY C PP V K RPPL +Y+RKLL+ DL
Sbjct: 723 TSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYVRKLLYKDL 782
Query: 656 DKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAV 713
K + E VLRQ+RKLPW D E Y++ C + + KY IH +A+L AGL Y ++ +
Sbjct: 783 SKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDVGI 842
Query: 714 AVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
VVD VLE+IRLG+E+N QRR++ +FLGELYNY V+S+VIF TLY FG
Sbjct: 843 HVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFG 899
>gi|395827341|ref|XP_003786863.1| PREDICTED: regulator of nonsense transcripts 2 [Otolemur garnettii]
Length = 1271
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 291/719 (40%), Positives = 418/719 (58%), Gaps = 50/719 (6%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
+ +CSL HQRY DF+P L+ K F E ++ K R+ L+ + EL +G
Sbjct: 222 VHLCSLFHQRYADFAPSLLQVWKKHF------EARKEEKTPNITKLRTDLRFIAELTIVG 275
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGL---PLSGPGQEI 176
I D I + L SI + DR++ T+++++ SF R G GL + ++
Sbjct: 276 IFTDKEGLSLIYEQLKSIINA-DRES-HTHVSVVISFCRHCGDDIAGLVPRKVKSAAEKF 333
Query: 177 YEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEE 236
F I+ ++++ F+ Y+ ++ + L+ +H L+ E +N +IL++KGELSE+
Sbjct: 334 NLSFPPSEIISPEKQQPFQNLLKEYFTSLTKHLKRDHRELQNTERQNRRILHSKGELSED 393
Query: 237 NSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTS-GEDA-SPASGKDSSV 294
YE+ SY L N SLA+ LD P +P+D T G D +P + +
Sbjct: 394 RHKQYEEFAMSYQKLLANSQSLADLLDENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDL 453
Query: 295 PEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLA 354
+W+DE+ R FYE L DL+AFVPA+L K NE S + E D + E +
Sbjct: 454 EGGIWEDEDARNFYENLIDLKAFVPAILF-----KDNEKSCQNKESNRDDSKEAKE---- 504
Query: 355 AQDTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDK 414
++D E S SP+ D E + + + D + +G D +A+D K
Sbjct: 505 SKDNKEAS-----SPD--------DLELELENLEINDDTLELEGGD-------EAEDLTK 544
Query: 415 EKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCY-LNSKSNR 473
+ E++ E + + LK + +DA LQ+LP CV+RDLID+ ++FC +N+K+NR
Sbjct: 545 KLLDEQEQEDEEASTGSHLKLI----VDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANR 600
Query: 474 KRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIE 533
K+LVRALF VPR L+LLP+Y+R+VATL CM DV+ L ML +F F + KKDQ+NIE
Sbjct: 601 KKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINIE 660
Query: 534 TKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETS 593
TK + +RFIGEL KFK+ CLK L DF+HH+I++AC LLETCGRFL+RSPE+
Sbjct: 661 TKNKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESH 720
Query: 594 IRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFS 653
+R + +LE +MR K +LD R+VT+VENAYY C PP V K RPPL +Y+RKLL+
Sbjct: 721 LRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYVRKLLYK 780
Query: 654 DLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEF 711
DL K + E VLRQ+RKLPW D E Y++ C + + KY IH +A+L AGL Y ++
Sbjct: 781 DLSKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDV 840
Query: 712 AVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
+ VVD VLE+IRLG+E+N QRR++ +FLGELYNY V+S+VIF TLY FG
Sbjct: 841 GIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFG 899
>gi|440903311|gb|ELR53990.1| Regulator of nonsense transcripts 2, partial [Bos grunniens mutus]
Length = 1267
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 291/719 (40%), Positives = 418/719 (58%), Gaps = 50/719 (6%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
+ +CSL HQRY DF+P L+ K F E ++ K R+ L+ + EL +G
Sbjct: 220 VHLCSLFHQRYADFAPSLLQVWKKHF------EARKEEKTPNITKLRTDLRFIAELTIVG 273
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGL---PLSGPGQEI 176
I D I + L +I + DR++ T+++++ SF R G GL + ++
Sbjct: 274 IFTDKEGLSLIYEQLKNIIN-ADRES-HTHVSVVISFCRHCGDDIAGLVPRKVKSAAEKF 331
Query: 177 YEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEE 236
F I+ ++++ F+ Y+ ++ + L+ +H L+ E +N +IL++KGELSE+
Sbjct: 332 NLSFPPSEIISPEKQQPFQNLLKEYFTSLTKHLKRDHRELQNTERQNRRILHSKGELSED 391
Query: 237 NSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTS-GEDA-SPASGKDSSV 294
YE+ SY L N SLA+ LD P +P+D T G D +P + +
Sbjct: 392 RHKQYEEFAMSYQKLLANSQSLADLLDENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDL 451
Query: 295 PEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLA 354
+W+DE+ R FYE L DL+AFVPA+L K NE S + E D + E +
Sbjct: 452 EGGIWEDEDARNFYENLIDLKAFVPAILF-----KDNEKSCQNKESSKDDSKETKE---- 502
Query: 355 AQDTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDK 414
+D EVS SP+ D E + + + D + +G D +A+D K
Sbjct: 503 PKDNKEVS-----SPD--------DLELELENLEINDDTLELEGGD-------EAEDLTK 542
Query: 415 EKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCY-LNSKSNR 473
+ E++ E + + LK + +DA LQ+LP CV+RDLID+ ++FC +N+K+NR
Sbjct: 543 KLLDEQEQEDEEASTGSHLKLI----VDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANR 598
Query: 474 KRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIE 533
K+LVRALF VPR L+LLP+Y+R+VATL CM DV+ L ML +F F + KKDQ+NIE
Sbjct: 599 KKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINIE 658
Query: 534 TKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETS 593
TK + +RFIGEL KFK+ CLK L DF+HH+I++AC LLETCGRFL+RSPE+
Sbjct: 659 TKNKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESH 718
Query: 594 IRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFS 653
+R + +LE +MR K +LD R+VT+VENAYY C PP V K RPPL +Y+RKLL+
Sbjct: 719 LRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYVRKLLYK 778
Query: 654 DLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEF 711
DL K + E VLRQ+RKLPW D E Y++ C + + KY IH +A+L AGL Y ++
Sbjct: 779 DLSKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDV 838
Query: 712 AVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
+ VVD VLE+IRLG+E+N QRR++ +FLGELYNY V+S+VIF TLY FG
Sbjct: 839 GIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFG 897
>gi|384940740|gb|AFI33975.1| regulator of nonsense transcripts 2 [Macaca mulatta]
Length = 1272
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 291/717 (40%), Positives = 417/717 (58%), Gaps = 50/717 (6%)
Query: 63 ICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIGII 122
+CSL HQRY DF+P L+ K F E ++ K R+ L+ + EL +GI
Sbjct: 225 LCSLFHQRYADFAPSLLQVWKKHF------EARKEEKTPNITKLRTDLRFIAELTIVGIF 278
Query: 123 EDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGL---PLSGPGQEIYE 178
D I + L +I + DR++ T+++++ SF R G GL + ++
Sbjct: 279 TDKEGLSLIYEQLKNIINA-DRES-HTHVSVVISFCRHCGDDIAGLVPRKVKSAAEKFNL 336
Query: 179 EFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENS 238
F I+ ++++ F+ Y+ ++ + L+ +H L+ E +N +IL++KGELSE+
Sbjct: 337 SFPPSEIISPEKQQPFQNLLKEYFTSLTKHLKRDHRELQNTERQNRRILHSKGELSEDRH 396
Query: 239 SSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTS-GEDA-SPASGKDSSVPE 296
YE+ SY L N SLA+ LD P +P+D T G D +P + +
Sbjct: 397 KQYEEFAMSYQKLLANSQSLADLLDENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDLEG 456
Query: 297 PVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQ 356
+W+DE+ R FYE L DL+AFVPA+L K NE S + E D E + ++
Sbjct: 457 GIWEDEDARNFYENLIDLKAFVPAILF-----KDNEKSCQNKESNKDDTKEAKE----SK 507
Query: 357 DTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEK 416
D EVS SP+ D E + + + D + +G D +A+D K+
Sbjct: 508 DNKEVS-----SPD--------DLELELENLEINDDTLELEGGD-------EAEDLTKKL 547
Query: 417 GKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCY-LNSKSNRKR 475
E++ E + + LK + +DA LQ+LP CV+RDLID+ ++FC +N+K+NRK+
Sbjct: 548 LDEQEQEDEEASTGSHLKLI----VDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANRKK 603
Query: 476 LVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETK 535
LVRALF VPR L+LLP+Y+R+VATL CM DV+ L ML +F F + KKDQ+NIETK
Sbjct: 604 LVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINIETK 663
Query: 536 IRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIR 595
+ +RFIGEL KFK+ CLK L DF+HH+I++AC LLETCGRFL+RSPE+ +R
Sbjct: 664 NKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESHLR 723
Query: 596 MANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDL 655
+ +LE +MR K +LD R+VT+VENAYY C PP V K RPPL +Y+RKLL+ DL
Sbjct: 724 TSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYVRKLLYKDL 783
Query: 656 DKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAV 713
K + E VLRQ+RKLPW D E Y++ C + + KY IH +A+L AGL Y ++ +
Sbjct: 784 SKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDVGI 843
Query: 714 AVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
VVD VLE+IRLG+E+N QRR++ +FLGELYNY V+S+VIF TLY FG
Sbjct: 844 HVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFG 900
>gi|383417365|gb|AFH31896.1| regulator of nonsense transcripts 2 [Macaca mulatta]
Length = 1272
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 291/717 (40%), Positives = 417/717 (58%), Gaps = 50/717 (6%)
Query: 63 ICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIGII 122
+CSL HQRY DF+P L+ K F E ++ K R+ L+ + EL +GI
Sbjct: 225 LCSLFHQRYADFAPSLLQVWKKHF------EARKEEKTPNITKLRTDLRFIAELTIVGIF 278
Query: 123 EDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGL---PLSGPGQEIYE 178
D I + L +I + DR++ T+++++ SF R G GL + ++
Sbjct: 279 TDKEGLSLIYEQLKNIINA-DRES-HTHVSVVISFCRHCGDDIAGLVPRKVKSAAEKFNL 336
Query: 179 EFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENS 238
F I+ ++++ F+ Y+ ++ + L+ +H L+ E +N +IL++KGELSE+
Sbjct: 337 SFPPSEIISPEKQQPFQNLLKEYFTSLTKHLKRDHRELQNTERQNRRILHSKGELSEDRH 396
Query: 239 SSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTS-GEDA-SPASGKDSSVPE 296
YE+ SY L N SLA+ LD P +P+D T G D +P + +
Sbjct: 397 KQYEEFAMSYQKLLANSQSLADLLDENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDLEG 456
Query: 297 PVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQ 356
+W+DE+ R FYE L DL+AFVPA+L K NE S + E D E + ++
Sbjct: 457 GIWEDEDARNFYENLIDLKAFVPAILF-----KDNEKSCQNKESNKDDTKEAKE----SK 507
Query: 357 DTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEK 416
D EVS SP+ D E + + + D + +G D +A+D K+
Sbjct: 508 DNKEVS-----SPD--------DLELELENLEINDDTLELEGGD-------EAEDLTKKL 547
Query: 417 GKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCY-LNSKSNRKR 475
E++ E + + LK + +DA LQ+LP CV+RDLID+ ++FC +N+K+NRK+
Sbjct: 548 LDEQEQEDEEASTGSHLKLI----VDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANRKK 603
Query: 476 LVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETK 535
LVRALF VPR L+LLP+Y+R+VATL CM DV+ L ML +F F + KKDQ+NIETK
Sbjct: 604 LVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINIETK 663
Query: 536 IRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIR 595
+ +RFIGEL KFK+ CLK L DF+HH+I++AC LLETCGRFL+RSPE+ +R
Sbjct: 664 NKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESHLR 723
Query: 596 MANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDL 655
+ +LE +MR K +LD R+VT+VENAYY C PP V K RPPL +Y+RKLL+ DL
Sbjct: 724 TSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYVRKLLYKDL 783
Query: 656 DKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAV 713
K + E VLRQ+RKLPW D E Y++ C + + KY IH +A+L AGL Y ++ +
Sbjct: 784 SKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDVGI 843
Query: 714 AVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
VVD VLE+IRLG+E+N QRR++ +FLGELYNY V+S+VIF TLY FG
Sbjct: 844 HVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFG 900
>gi|157823467|ref|NP_001101891.1| regulator of nonsense transcripts 2 [Rattus norvegicus]
gi|149021045|gb|EDL78652.1| UPF2 regulator of nonsense transcripts homolog (yeast) (predicted)
[Rattus norvegicus]
Length = 1268
Score = 481 bits (1237), Expect = e-132, Method: Compositional matrix adjust.
Identities = 290/719 (40%), Positives = 417/719 (57%), Gaps = 51/719 (7%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
+ +CSL HQRY DF+P L+ K F E ++ K R+ L+ + EL +G
Sbjct: 222 VHLCSLFHQRYADFAPSLLQVWKKHF------EARKEEKTPNITKLRTDLRFIAELTIVG 275
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGL---PLSGPGQEI 176
I D I + L SI + DR++ T+++++ SF R G GL + ++
Sbjct: 276 IFTDKEGLSLIYEQLKSIINA-DRES-HTHVSVVISFCRHCGDDIAGLVPRKVKSAAEKF 333
Query: 177 YEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEE 236
F I+ ++++ F+ Y+ ++ + L+ +H L+ E +N +IL++KGELSE+
Sbjct: 334 NLNFPPSEIISPEKQQPFQNLLKEYFTSLTKHLKRDHRELQNTERQNRRILHSKGELSED 393
Query: 237 NSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTS-GEDA-SPASGKDSSV 294
YE+ SY L N SLA+ LD P +P+D T G D +P + +
Sbjct: 394 RHKQYEEFAMSYQKLLANSQSLADLLDENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDL 453
Query: 295 PEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLA 354
+W+DE+ R FYE L DL+AFVPA+L + E N+ S K + A EP
Sbjct: 454 EGGIWEDEDARNFYENLIDLKAFVPAILFKDNEKSQNKDSSK---DDSKEAKEP------ 504
Query: 355 AQDTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDK 414
+D E S SP+ D E + + + D + +G D+ A+D K
Sbjct: 505 -KDNKEAS-----SPD--------DLELELENLEINDDTLELEGGDE-------AEDLTK 543
Query: 415 EKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCY-LNSKSNR 473
+ E++ E + + LK + +DA LQ+LP CV+RDLID+ ++FC +N+K+NR
Sbjct: 544 KLLDEQEQEDEEASTGSHLKLI----VDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANR 599
Query: 474 KRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIE 533
K+LVRALF VPR L+LLP+Y+R+VATL CM DV+ L ML +F F + KKDQ+NIE
Sbjct: 600 KKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINIE 659
Query: 534 TKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETS 593
TK + +RFIGEL KFK+ CLK L DF+HH+I++AC LLETCGRFL+RSPE+
Sbjct: 660 TKNKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESH 719
Query: 594 IRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFS 653
+R + +LE +MR K +LD R+VT+VENAYY C PP V + RPPL +Y+RKLL+
Sbjct: 720 LRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVRRKRPPLQEYVRKLLYK 779
Query: 654 DLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEF 711
DL K + E VLRQ+RKLPW D E Y++ C + + KY IH +A+L AGL Y ++
Sbjct: 780 DLSKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDV 839
Query: 712 AVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
+ VVD VLE+IRLG+E+N QRR++ +FLGELYNY V+S+VIF TLY FG
Sbjct: 840 GIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFG 898
>gi|358414903|ref|XP_003582946.1| PREDICTED: regulator of nonsense transcripts 2 [Bos taurus]
gi|358414905|ref|XP_001249612.3| PREDICTED: regulator of nonsense transcripts 2 isoform 2 [Bos
taurus]
gi|359071270|ref|XP_003586795.1| PREDICTED: regulator of nonsense transcripts 2 isoform 2 [Bos
taurus]
gi|359071273|ref|XP_002692096.2| PREDICTED: regulator of nonsense transcripts 2 isoform 1 [Bos
taurus]
Length = 1271
Score = 481 bits (1237), Expect = e-132, Method: Compositional matrix adjust.
Identities = 291/719 (40%), Positives = 418/719 (58%), Gaps = 50/719 (6%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
+ +CSL HQRY DF+P L+ K F E ++ K R+ L+ + EL +G
Sbjct: 222 VHLCSLFHQRYADFAPSLLQVWKKHF------EARKEEKTPNITKLRTDLRFIAELTIVG 275
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGL---PLSGPGQEI 176
I D I + L +I + DR++ T+++++ SF R G GL + ++
Sbjct: 276 IFTDKEGLSLIYEQLKNIINA-DRES-HTHVSVVISFCRHCGDDIAGLVPRKVKSAAEKF 333
Query: 177 YEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEE 236
F I+ ++++ F+ Y+ ++ + L+ +H L+ E +N +IL++KGELSE+
Sbjct: 334 NLSFPPSEIISPEKQQPFQNLLKEYFTSLTKHLKRDHRELQNTERQNRRILHSKGELSED 393
Query: 237 NSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTS-GEDA-SPASGKDSSV 294
YE+ SY L N SLA+ LD P +P+D T G D +P + +
Sbjct: 394 RHKQYEEFAMSYQKLLANSQSLADLLDENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDL 453
Query: 295 PEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLA 354
+W+DE+ R FYE L DL+AFVPA+L K NE S + E D + E +
Sbjct: 454 EGGIWEDEDARNFYENLIDLKAFVPAILF-----KDNEKSCQNKESSKDDSKETKE---- 504
Query: 355 AQDTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDK 414
+D EVS SP+ D E + + + D + +G D +A+D K
Sbjct: 505 PKDNKEVS-----SPD--------DLELELENLEINDDTLELEGGD-------EAEDLTK 544
Query: 415 EKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCY-LNSKSNR 473
+ E++ E + + LK + +DA LQ+LP CV+RDLID+ ++FC +N+K+NR
Sbjct: 545 KLLDEQEQEDEEASTGSHLKLI----VDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANR 600
Query: 474 KRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIE 533
K+LVRALF VPR L+LLP+Y+R+VATL CM DV+ L ML +F F + KKDQ+NIE
Sbjct: 601 KKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINIE 660
Query: 534 TKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETS 593
TK + +RFIGEL KFK+ CLK L DF+HH+I++AC LLETCGRFL+RSPE+
Sbjct: 661 TKNKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESH 720
Query: 594 IRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFS 653
+R + +LE +MR K +LD R+VT+VENAYY C PP V K RPPL +Y+RKLL+
Sbjct: 721 LRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYVRKLLYK 780
Query: 654 DLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEF 711
DL K + E VLRQ+RKLPW D E Y++ C + + KY IH +A+L AGL Y ++
Sbjct: 781 DLSKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDV 840
Query: 712 AVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
+ VVD VLE+IRLG+E+N QRR++ +FLGELYNY V+S+VIF TLY FG
Sbjct: 841 GIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFG 899
>gi|119606737|gb|EAW86331.1| UPF2 regulator of nonsense transcripts homolog (yeast), isoform
CRA_b [Homo sapiens]
Length = 1258
Score = 480 bits (1236), Expect = e-132, Method: Compositional matrix adjust.
Identities = 291/717 (40%), Positives = 413/717 (57%), Gaps = 50/717 (6%)
Query: 63 ICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIGII 122
+CSL HQRY DF+P L+ K F E ++ K R+ L+ + EL +GI
Sbjct: 225 LCSLFHQRYADFAPSLLQVWKKHF------EARKEEKTPNITKLRTDLRFIAELTIVGIF 278
Query: 123 EDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGL---PLSGPGQEIYE 178
D I + L +I + DR++ T+++++ SF R G GL + ++
Sbjct: 279 TDKEGLSLIYEQLKNIINA-DRES-HTHVSVVISFCRHCGDDIAGLVPRKVKSAAEKFNL 336
Query: 179 EFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENS 238
F I+ ++++ F+ Y+ ++ + L+ +H L+ E +N +IL++KGELSE+
Sbjct: 337 SFPPSEIISPEKQQPFQNLLKEYFTSLTKHLKRDHRELQNTERQNRRILHSKGELSEDRH 396
Query: 239 SSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTS-GEDA-SPASGKDSSVPE 296
YE+ SY L N SLA+ LD P +P+D T G D +P + +
Sbjct: 397 KQYEEFAMSYQKLLANSQSLADLLDENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDLEG 456
Query: 297 PVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQ 356
+W+DE+ R FYE L DL+AFVPA+L K NE S + E D
Sbjct: 457 GIWEDEDARNFYENLIDLKAFVPAILF-----KDNEKSCQNKESNKD------------- 498
Query: 357 DTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEK 416
DT E S E K V D E + + + D + +G D+ A+D K+
Sbjct: 499 DTKEAKE----SKENKEVSSPDDLELELENLEINDDTLELEGGDE-------AEDLTKKL 547
Query: 417 GKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCY-LNSKSNRKR 475
E++ E + + LK + +DA LQ+LP CV+RDLID+ ++FC +N+K+NRK+
Sbjct: 548 LDEQEQEDEEASTGSHLKLI----VDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANRKK 603
Query: 476 LVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETK 535
LVRALF VPR L+LLP+Y+R+VATL CM DV+ L ML +F F + KKDQ+NIETK
Sbjct: 604 LVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINIETK 663
Query: 536 IRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIR 595
+ +RFIGEL KFK+ CLK L DF+HH+I++AC LLETCGRFL+RSPE+ +R
Sbjct: 664 NKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESHLR 723
Query: 596 MANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDL 655
+ +LE +MR K +LD R+VT+VENAYY C PP V K RPPL +Y+RKLL+ DL
Sbjct: 724 TSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYVRKLLYKDL 783
Query: 656 DKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAV 713
K + E VLRQ+RKLPW D E Y++ C + + KY IH +A+L AGL Y ++ +
Sbjct: 784 SKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDVGI 843
Query: 714 AVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
VVD VLE+IRLG+E+N QRR++ +FLGELYNY V+S+VIF TLY FG
Sbjct: 844 HVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFG 900
>gi|355562289|gb|EHH18883.1| Nonsense mRNA reducing factor 2 [Macaca mulatta]
gi|355782637|gb|EHH64558.1| Nonsense mRNA reducing factor 2 [Macaca fascicularis]
Length = 1270
Score = 480 bits (1236), Expect = e-132, Method: Compositional matrix adjust.
Identities = 291/717 (40%), Positives = 417/717 (58%), Gaps = 50/717 (6%)
Query: 63 ICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIGII 122
+CSL HQRY DF+P L+ K F E ++ K R+ L+ + EL +GI
Sbjct: 225 LCSLFHQRYADFAPSLLQVWKKHF------EARKEEKTPNITKLRTDLRFIAELTIVGIF 278
Query: 123 EDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGL---PLSGPGQEIYE 178
D I + L +I + DR++ T+++++ SF R G GL + ++
Sbjct: 279 TDKEGLSLIYEQLKNIINA-DRES-HTHVSVVISFCRHCGDDIAGLVPRKVKSAAEKFNL 336
Query: 179 EFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENS 238
F I+ ++++ F+ Y+ ++ + L+ +H L+ E +N +IL++KGELSE+
Sbjct: 337 SFPPSEIISPEKQQPFQNLLKEYFTSLTKHLKRDHRELQNTERQNRRILHSKGELSEDRH 396
Query: 239 SSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTS-GEDA-SPASGKDSSVPE 296
YE+ SY L N SLA+ LD P +P+D T G D +P + +
Sbjct: 397 KQYEEFAMSYQKLLANSQSLADLLDENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDLEG 456
Query: 297 PVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQ 356
+W+DE+ R FYE L DL+AFVPA+L K NE S + E D E + ++
Sbjct: 457 GIWEDEDARNFYENLIDLKAFVPAILF-----KDNEKSCQNKESNKDDTKEAKE----SK 507
Query: 357 DTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEK 416
D EVS SP+ D E + + + D + +G D +A+D K+
Sbjct: 508 DNKEVS-----SPD--------DLELELENLEINDDTLELEGGD-------EAEDLTKKL 547
Query: 417 GKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCY-LNSKSNRKR 475
E++ E + + LK + +DA LQ+LP CV+RDLID+ ++FC +N+K+NRK+
Sbjct: 548 LDEQEQEDEEASTGSHLKLI----VDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANRKK 603
Query: 476 LVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETK 535
LVRALF VPR L+LLP+Y+R+VATL CM DV+ L ML +F F + KKDQ+NIETK
Sbjct: 604 LVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINIETK 663
Query: 536 IRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIR 595
+ +RFIGEL KFK+ CLK L DF+HH+I++AC LLETCGRFL+RSPE+ +R
Sbjct: 664 NKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESHLR 723
Query: 596 MANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDL 655
+ +LE +MR K +LD R+VT+VENAYY C PP V K RPPL +Y+RKLL+ DL
Sbjct: 724 TSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYVRKLLYKDL 783
Query: 656 DKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAV 713
K + E VLRQ+RKLPW D E Y++ C + + KY IH +A+L AGL Y ++ +
Sbjct: 784 SKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDVGI 843
Query: 714 AVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
VVD VLE+IRLG+E+N QRR++ +FLGELYNY V+S+VIF TLY FG
Sbjct: 844 HVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFG 900
>gi|397515682|ref|XP_003828077.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts 2
[Pan paniscus]
Length = 1452
Score = 480 bits (1236), Expect = e-132, Method: Compositional matrix adjust.
Identities = 291/719 (40%), Positives = 414/719 (57%), Gaps = 50/719 (6%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
+ +CSL HQRY DF+P L+ K F E ++ K R+ L+ + EL +G
Sbjct: 403 VHLCSLFHQRYADFAPSLLQVWKKHF------EARKEEKTPNITKLRTDLRFIAELTIVG 456
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGL---PLSGPGQEI 176
I D I + L +I + DR++ T+++++ SF R G GL + ++
Sbjct: 457 IFTDKEGLSLIYEQLKNIIN-ADRES-HTHVSVVISFCRHCGDDIAGLVPRKVKSAAEKF 514
Query: 177 YEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEE 236
F I+ ++++ F+ Y+ ++ + L+ +H L+ E +N +IL++KGELSE+
Sbjct: 515 NLSFPPSEIISPEKQQPFQNLLKEYFTSLTKHLKRDHRELQNTERQNRRILHSKGELSED 574
Query: 237 NSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTS-GEDA-SPASGKDSSV 294
YE+ SY L N SLA+ LD P +P+D T G D +P + +
Sbjct: 575 RHKQYEEFAMSYQKLLANSQSLADLLDENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDL 634
Query: 295 PEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLA 354
+W+DE+ R FYE L DL+AFVPA+L K NE S + E D
Sbjct: 635 EGGIWEDEDARNFYENLIDLKAFVPAILF-----KDNEKSCQNKESNKD----------- 678
Query: 355 AQDTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDK 414
DT E S E K V D E + + + D + +G D+ A+D K
Sbjct: 679 --DTKEAKE----SKENKEVSSPDDLELELENLEINDDTLELEGGDE-------AEDLTK 725
Query: 415 EKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCY-LNSKSNR 473
+ E++ E + + LK + +DA LQ+LP CV+RDLID+ ++FC +N+K+NR
Sbjct: 726 KLLDEQEQEDEEASTGSHLKLI----VDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANR 781
Query: 474 KRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIE 533
K+LVRALF VPR L+LLP+Y+R+VATL CM DV+ L ML +F F + KKDQ+NIE
Sbjct: 782 KKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINIE 841
Query: 534 TKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETS 593
TK + +RFIGEL KFK+ CLK L DF+HH+I++AC LLETCGRFL+RSPE+
Sbjct: 842 TKNKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESH 901
Query: 594 IRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFS 653
+R + +LE +MR K +LD R+VT+VENAYY C PP V K RPPL +Y+RKLL+
Sbjct: 902 LRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYVRKLLYK 961
Query: 654 DLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEF 711
DL K + E VLRQ+RKLPW D E Y++ C + + KY IH +A+L AGL Y ++
Sbjct: 962 DLSKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDV 1021
Query: 712 AVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
+ VVD VLE+IRLG+E+N QRR++ +FLGELYNY V+S+VIF TLY FG
Sbjct: 1022 GIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFG 1080
>gi|301779565|ref|XP_002925196.1| PREDICTED: regulator of nonsense transcripts 2-like [Ailuropoda
melanoleuca]
gi|281345763|gb|EFB21347.1| hypothetical protein PANDA_014646 [Ailuropoda melanoleuca]
Length = 1269
Score = 480 bits (1236), Expect = e-132, Method: Compositional matrix adjust.
Identities = 290/719 (40%), Positives = 417/719 (57%), Gaps = 50/719 (6%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
+ +CSL HQRY DF+P L+ K F E ++ K R+ L+ + EL +G
Sbjct: 222 VHLCSLFHQRYADFAPSLLQVWKKHF------EARKEEKTPNITKLRTDLRFIAELTIVG 275
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGL---PLSGPGQEI 176
I D I + L +I + DR++ T+++++ SF R G GL + ++
Sbjct: 276 IFTDKEGLSLIYEQLKNIIN-ADRES-HTHVSVVISFCRHCGDDIAGLVPRKVKSAAEKF 333
Query: 177 YEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEE 236
F I+ ++++ F+ Y+ ++ + L+ +H L+ E +N +IL++KGELSE+
Sbjct: 334 NLSFPPSEIISPEKQQPFQNLLKEYFTSLTKHLKRDHRELQNTERQNRRILHSKGELSED 393
Query: 237 NSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTS-GEDA-SPASGKDSSV 294
YE+ SY L N SLA+ LD P +P+D T G D +P + +
Sbjct: 394 RHKQYEEFAMSYQKLLANSQSLADLLDENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDL 453
Query: 295 PEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLA 354
+W+DE+ R FYE L DL+AFVPA+L K NE S Q DP + +
Sbjct: 454 EGGIWEDEDARNFYENLIDLKAFVPAILF-----KDNEKSC----QNKDPNKDDSKETKE 504
Query: 355 AQDTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDK 414
+D EVS +P+ D E + + + D + +G D +A+D K
Sbjct: 505 PKDNKEVS-----NPD--------DLELELENLEINDDTLELEGGD-------EAEDLTK 544
Query: 415 EKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCY-LNSKSNR 473
+ E++ E + + LK + +DA LQ+LP CV+RDLID+ ++FC +N+K+NR
Sbjct: 545 KLLDEQEQEDEEASTGSHLKLI----VDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANR 600
Query: 474 KRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIE 533
K+LVRALF VPR L+LLP+Y+R+VATL CM DV+ L ML +F F + KKDQ+NIE
Sbjct: 601 KKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINIE 660
Query: 534 TKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETS 593
TK + +RFIGEL KFK+ CLK L DF+HH+I++AC LLETCGRFL+RSPE+
Sbjct: 661 TKNKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESH 720
Query: 594 IRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFS 653
+R + +LE +MR K +LD R+VT+VENAYY C PP V K RPPL +Y+RKLL+
Sbjct: 721 LRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYVRKLLYK 780
Query: 654 DLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEF 711
DL K + E VLRQ+RKLPW D E Y++ C + + KY IH +A+L AGL Y ++
Sbjct: 781 DLSKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDV 840
Query: 712 AVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
+ VVD VLE+IRLG+E+N QRR++ +FLGELYNY V+S+VIF TLY FG
Sbjct: 841 GIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFG 899
>gi|291401994|ref|XP_002717550.1| PREDICTED: UPF2 regulator of nonsense transcripts homolog
[Oryctolagus cuniculus]
Length = 1262
Score = 480 bits (1235), Expect = e-132, Method: Compositional matrix adjust.
Identities = 291/717 (40%), Positives = 416/717 (58%), Gaps = 50/717 (6%)
Query: 63 ICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIGII 122
+CSL HQRY DF+P L+ K F E ++ K R+ L+ + EL +GI
Sbjct: 217 LCSLFHQRYADFAPSLLQVWKKHF------EARKEEKTPNITKLRTDLRFIAELTIVGIF 270
Query: 123 EDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGL---PLSGPGQEIYE 178
D I + L +I + DR++ T+++++ SF R G GL + ++
Sbjct: 271 TDKEGLSLIYEQLKNIINA-DRES-HTHVSVVISFCRHCGDDIAGLVPRKVKSAAEKFNL 328
Query: 179 EFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENS 238
F I+ ++++ F+ Y+ ++ + L+ +H L+ E +N +IL++KGELSE+
Sbjct: 329 SFPPSEIISPEKQQPFQNLLKEYFTSLTKHLKRDHRELQNTERQNRRILHSKGELSEDRH 388
Query: 239 SSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTS-GEDA-SPASGKDSSVPE 296
YE+ SY L N SLA+ LD P +P+D T G D +P + +
Sbjct: 389 KQYEEFAMSYQKLLANSQSLADLLDENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDLEG 448
Query: 297 PVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQ 356
+W+DE+ R FYE L DL+AFVPA+L K NE S Q D E + ++
Sbjct: 449 GIWEDEDARNFYENLIDLKAFVPAILF-----KDNEKSC----QNKDSNKEDSKEAKESK 499
Query: 357 DTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEK 416
D EVS SP+ D E + + + D + +G D +A+D K+
Sbjct: 500 DNKEVS-----SPD--------DLELELENLEINDDTLELEGGD-------EAEDLTKKL 539
Query: 417 GKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCY-LNSKSNRKR 475
E++ E + + LK + +DA LQ+LP CV+RDLID+ ++FC +N+K+NRK+
Sbjct: 540 LDEQEQEDEEASTGSHLKLI----VDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANRKK 595
Query: 476 LVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETK 535
LVRALF VPR L+LLP+Y+R+VATL CM DV+ L ML +F F + KKDQ+NIETK
Sbjct: 596 LVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINIETK 655
Query: 536 IRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIR 595
+ +RFIGEL KFK+ CLK L DF+HH+I++AC LLETCGRFL+RSPE+ +R
Sbjct: 656 NKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESHLR 715
Query: 596 MANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDL 655
+ +LE +MR K +LD R+VT+VENAYY C PP V K RPPL +Y+RKLL+ DL
Sbjct: 716 TSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYVRKLLYKDL 775
Query: 656 DKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAV 713
K + E VLRQ+RKLPW D E Y++ C + + KY IH +A+L AGL Y ++ +
Sbjct: 776 SKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDVGI 835
Query: 714 AVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
VVD VLE+IRLG+E+N QRR++ +FLGELYNY V+S+VIF TLY FG
Sbjct: 836 HVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFG 892
>gi|194227172|ref|XP_001916636.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts 2
[Equus caballus]
Length = 1268
Score = 480 bits (1235), Expect = e-132, Method: Compositional matrix adjust.
Identities = 291/717 (40%), Positives = 417/717 (58%), Gaps = 50/717 (6%)
Query: 63 ICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIGII 122
+CSL HQRY DF+P L+ K F E ++ K R+ L+ + EL +GI
Sbjct: 223 LCSLFHQRYADFAPSLLQVWKKHF------EARKEEKTPNITKLRTDLRFIAELTIVGIF 276
Query: 123 EDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGLP---LSGPGQEIYE 178
D I + L +I + DR++ T+++++ SF R G GL + ++
Sbjct: 277 TDKEGLSLIYEQLKNIINA-DRES-HTHVSVVISFCRHCGDDIAGLAPRKVKSAAEKFNL 334
Query: 179 EFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENS 238
F I+ ++++ F+ Y+ ++ + L+ +H L+ E +N +IL++KGELSE+
Sbjct: 335 GFPPSEIISPEKQQPFQNLLKEYFTSLTKHLKRDHRELQNTERQNRRILHSKGELSEDRH 394
Query: 239 SSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTS-GEDA-SPASGKDSSVPE 296
YE+ SY L N SLA+ LD P +P+D T G D +P + +
Sbjct: 395 KQYEEFAMSYQKLLANSQSLADLLDENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDLEG 454
Query: 297 PVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQ 356
+W+DE+ R FYE L DL+AFVPA+L K NE S + E D + E + +
Sbjct: 455 GIWEDEDARNFYENLIDLKAFVPAILF-----KDNEKSCQNKESNKDDSKEAKE----PK 505
Query: 357 DTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEK 416
D+ EVS SP+ D E + + D + +G D +A+D K+
Sbjct: 506 DSKEVS-----SPD--------DLELELENLEISDDTLELEGGD-------EAEDLTKKL 545
Query: 417 GKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCY-LNSKSNRKR 475
E++ E + + LK + +DA LQ+LP CV+RDLID+ ++FC +N+K+NRK+
Sbjct: 546 LDEQEQEDEEASTGSHLKLI----VDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANRKK 601
Query: 476 LVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETK 535
LVRALF VPR L+LLP+Y+R+VATL CM DV+ L ML +F F + KKDQ+NIETK
Sbjct: 602 LVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINIETK 661
Query: 536 IRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIR 595
+ +RFIGEL KFK+ CLK L DF+HH+I++AC LLETCGRFL+RSPE+ +R
Sbjct: 662 NKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESHLR 721
Query: 596 MANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDL 655
+ +LE +MR K +LD R+VT+VENAYY C PP V K RPPL +Y+RKLL+ DL
Sbjct: 722 TSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYVRKLLYKDL 781
Query: 656 DKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAV 713
K + E VLRQ+RKLPW D E Y++ C + + KY IH +A+L AGL Y ++ +
Sbjct: 782 SKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDVGI 841
Query: 714 AVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
VVD VLE+IRLG+E+N QRR++ +FLGELYNY V+S+VIF TLY FG
Sbjct: 842 HVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFG 898
>gi|354467984|ref|XP_003496447.1| PREDICTED: regulator of nonsense transcripts 2-like [Cricetulus
griseus]
Length = 1269
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 290/719 (40%), Positives = 417/719 (57%), Gaps = 51/719 (7%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
+ +CSL HQRY DF+P L+ K F E ++ K R+ L+ + EL +G
Sbjct: 222 VHLCSLFHQRYADFAPSLLQVWKKHF------EARKEEKTPNITKLRTDLRFIAELTIVG 275
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGL---PLSGPGQEI 176
I D I + L SI + DR++ T+++++ SF R G GL + ++
Sbjct: 276 IFTDKEGLSLIYEQLKSIINA-DRES-HTHVSVVISFCRHCGDDIAGLVPRKVKSAAEKF 333
Query: 177 YEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEE 236
F I+ ++++ F+ Y+ ++ + L+ +H L+ E +N +IL++KGELSE+
Sbjct: 334 NLNFPPSEIISPEKQQPFQNLLKEYFTSLTKHLKRDHRELQNTERQNRRILHSKGELSED 393
Query: 237 NSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTS-GEDA-SPASGKDSSV 294
YE+ SY L N SLA+ LD P +P+D T G D +P + +
Sbjct: 394 RHKQYEEFAMSYQKLLANSQSLADLLDENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDL 453
Query: 295 PEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLA 354
+W+DE+ R FYE L DL+AFVPA+L + E N+ + K + A EP
Sbjct: 454 EGGIWEDEDARNFYENLIDLKAFVPAILFKDNEKSQNKDANK---DDSKEAKEP------ 504
Query: 355 AQDTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDK 414
+D E S SP+ D E + + + D + +G D+ A+D K
Sbjct: 505 -KDNKEAS-----SPD--------DLELELENLEINDDTLELEGGDE-------AEDLTK 543
Query: 415 EKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCY-LNSKSNR 473
+ E++ E + + LK + +DA LQ+LP CV+RDLID+ ++FC +N+K+NR
Sbjct: 544 KLLDEQEQEDEEASTGSHLKLI----VDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANR 599
Query: 474 KRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIE 533
K+LVRALF VPR L+LLP+Y+R+VATL CM DV+ L ML +F F + KKDQ+NIE
Sbjct: 600 KKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINIE 659
Query: 534 TKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETS 593
TK + +RFIGEL KFK+ CLK L DF+HH+I++AC LLETCGRFL+RSPE+
Sbjct: 660 TKNKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESH 719
Query: 594 IRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFS 653
+R + +LE +MR K +LD R+VT+VENAYY C PP V K RPPL +Y+RKLL+
Sbjct: 720 LRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVRKKRPPLQEYVRKLLYK 779
Query: 654 DLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEF 711
DL K + E VLRQ+RKLPW D E Y++ C + + KY IH +A+L AGL Y ++
Sbjct: 780 DLSKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDV 839
Query: 712 AVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
+ VVD VLE+IRLG+E+N QRR++ +FLGELYNY V+S+VIF TLY FG
Sbjct: 840 GIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFG 898
>gi|334348398|ref|XP_001367767.2| PREDICTED: regulator of nonsense transcripts 2 [Monodelphis
domestica]
Length = 1337
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 286/719 (39%), Positives = 415/719 (57%), Gaps = 50/719 (6%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
+ +CSL HQRY DF+P L+ K F E ++ K R+ L+ + EL +G
Sbjct: 222 VHLCSLFHQRYADFAPSLLQVWKKHF------EARKEEKTPNITKLRTDLRFIAELTIVG 275
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGL---PLSGPGQEI 176
I D I + L +I + DR++ T+++++ SF R G GL + G ++
Sbjct: 276 IFTDKEGLSLIYEQLKNIIN-ADRES-HTHVSVVISFCRHCGDDIAGLVPRKVKGAAEKF 333
Query: 177 YEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEE 236
F I+ ++++ F+ Y+ ++ + L+ +H L+ +E +N +IL++KGELSE+
Sbjct: 334 NLSFPPSEIISPEKQQPFQNLLKEYFTSLTKHLKRDHRELQNIERQNRRILHSKGELSED 393
Query: 237 NSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTS-GEDA-SPASGKDSSV 294
YE+ SY L N SLA+ LD P +P+D T G D +P + +
Sbjct: 394 RHKQYEEFAMSYQKLLANSQSLADLLDENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDL 453
Query: 295 PEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLA 354
+W+DE+ R FYE L DL+AFVPA+L K NE + + +
Sbjct: 454 EGGIWEDEDARNFYENLIDLKAFVPAILF-----KDNERTYQ-----------------S 491
Query: 355 AQDTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDK 414
E S + + K V D E + + + D + +G D +A+D K
Sbjct: 492 KDSNKEDSKESKEPKDNKDVSNTDDLELELENLEINDDTLELEGGD-------EAEDLTK 544
Query: 415 EKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCY-LNSKSNR 473
+ E++ E + + LK + +DA LQ+LP CV+RDLID+ ++FC +N+K+NR
Sbjct: 545 KLLDEQEQEDEEASTGSHLKLI----VDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANR 600
Query: 474 KRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIE 533
++LVRALF VPR L+LLP+Y+R+VATL CM DV+ L ML+ +F F + KKDQ+NIE
Sbjct: 601 RKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLKGDFRFHVRKKDQINIE 660
Query: 534 TKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETS 593
TK + +RFIGEL KFK+ CLK L DF+HH+I++AC LLETCGRFL+RSPE+
Sbjct: 661 TKNKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESH 720
Query: 594 IRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFS 653
+R + +LE +MR K +LD R+VT+VENAYY C PP V K RPPL +YIRKLL+
Sbjct: 721 LRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYIRKLLYK 780
Query: 654 DLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEF 711
DL K + E VLRQ+RKLPW D E Y++ C + + KY IH +A+L AGL Y ++
Sbjct: 781 DLSKVTTEKVLRQMRKLPWQDPEVKEYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDV 840
Query: 712 AVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
+ VVD VLE+IRLG+E+N QRR++ +FLGELYNY V+S+VIF TLY FG
Sbjct: 841 GIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFG 899
>gi|355727797|gb|AES09313.1| UPF2 regulator of nonsense transcripts-like protein [Mustela
putorius furo]
Length = 1155
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 289/719 (40%), Positives = 418/719 (58%), Gaps = 50/719 (6%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
+ +CSL HQRY DF+P L+ K F E ++ K R+ L+ + EL +G
Sbjct: 109 VHLCSLFHQRYADFAPSLLQVWKKHF------EARKEEKTPNITKLRTDLRFIAELTIVG 162
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGL---PLSGPGQEI 176
I D I + L +I + DR++ T+++++ SF R G GL + ++
Sbjct: 163 IFTDKEGLSLIYEQLKNIIN-ADRES-HTHVSVVISFCRHCGDDIAGLVPRKVKSAAEKF 220
Query: 177 YEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEE 236
F I+ ++++ F+ Y+ ++ + L+ +H L+ E +N +IL++KGELSE+
Sbjct: 221 NLNFPPSEIISPEKQQPFQNLLKEYFTSLTKHLKRDHRELQNTERQNRRILHSKGELSED 280
Query: 237 NSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTS-GEDA-SPASGKDSSV 294
YE+ SY L N SLA+ LD P +P+D T G D +P + +
Sbjct: 281 RHKQYEEFAMSYQKLLANSQSLADLLDENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDL 340
Query: 295 PEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLA 354
+W+DE+ R FYE L DL+AFVPA+L K NE S + + D + E +
Sbjct: 341 EGGIWEDEDARNFYENLIDLKAFVPAILF-----KDNEKSCQNKDSNKDDSKETKE---- 391
Query: 355 AQDTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDK 414
+D EVS +P+ D E + + + D + +G D +A+D K
Sbjct: 392 PKDNKEVS-----NPD--------DLELELENLEINDDTLELEGGD-------EAEDLTK 431
Query: 415 EKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCY-LNSKSNR 473
+ E++ E + + LK + +DA LQ+LP CV+RDLID+ ++FC +N+K+NR
Sbjct: 432 KLLDEQEQEDEEASTGSHLKLI----VDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANR 487
Query: 474 KRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIE 533
K+LVRALF VPR L+LLP+Y+R+VATL CM DV+ L ML +F F + KKDQ+NIE
Sbjct: 488 KKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINIE 547
Query: 534 TKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETS 593
TK + +RFIGEL KFK+ CLK L DF+HH+I++AC LLETCGRFL+RSPE+
Sbjct: 548 TKNKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESH 607
Query: 594 IRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFS 653
+R + +LE +MR K +LD R+VT+VENAYY C PP V K RPPL +Y+RKLL+
Sbjct: 608 LRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYVRKLLYK 667
Query: 654 DLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEF 711
DL K + E VLRQ+RKLPW D E Y++ C + + KY IH +A+L AGL Y ++
Sbjct: 668 DLSKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDV 727
Query: 712 AVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
+ VVD VLE+IRLG+E+N QRR++ +FLGELYNY V+S+VIF TLY FG
Sbjct: 728 GIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFG 786
>gi|403278098|ref|XP_003930664.1| PREDICTED: regulator of nonsense transcripts 2 [Saimiri boliviensis
boliviensis]
Length = 1270
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 290/717 (40%), Positives = 418/717 (58%), Gaps = 50/717 (6%)
Query: 63 ICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIGII 122
+CSL HQRY DF+ L+ K F E ++ K R+ L+ + EL +GI
Sbjct: 224 LCSLFHQRYADFASSLLQVWKKHF------EARKEEKTPNITKLRTDLRFIAELTIVGIF 277
Query: 123 EDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGL---PLSGPGQEIYE 178
D I + L +I + DR++ T+++++ SF R G GL + ++
Sbjct: 278 TDKEGLSLIYEQLKNIINA-DRES-HTHVSVVISFCRHCGDDIAGLIPRKVKSAAEKFNL 335
Query: 179 EFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENS 238
F I+ ++++ F+ Y+ ++ + L+ +H L+ E +N +IL++KGELSE+
Sbjct: 336 SFPPSEIISPEKQQPFQNLLKEYFTSLTKHLKRDHRELQNTERQNRRILHSKGELSEDRH 395
Query: 239 SSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTS-GEDA-SPASGKDSSVPE 296
YE+ SY L N SLA+ LD P +P+D T G D +P + +
Sbjct: 396 KQYEEFAMSYQKLLANSQSLADLLDENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDLEG 455
Query: 297 PVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQ 356
+W+DE+ R FYE L DL+AFVPA+L K NE S + E D + E + ++
Sbjct: 456 GIWEDEDARNFYENLIDLKAFVPAILF-----KDNEKSCQNKESNKDDSKEAKE----SK 506
Query: 357 DTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEK 416
D+ EVS SP+ D E + + + D + +G D +A+D K+
Sbjct: 507 DSKEVS-----SPD--------DLELELENLEINDDTLELEGGD-------EAEDLTKKL 546
Query: 417 GKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCY-LNSKSNRKR 475
E++ E + + LK + +DA LQ+LP CV+RDLID+ ++FC +N+K+NRK+
Sbjct: 547 LDEQEQEDEEASTGSHLKLI----VDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANRKK 602
Query: 476 LVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETK 535
LVRALF VPR L+LLP+Y+R+VATL CM DV+ L ML +F F + KKDQ+NIETK
Sbjct: 603 LVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINIETK 662
Query: 536 IRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIR 595
+ +RFIGEL KFK+ CLK L DF+HH+I++AC LLETCGRFL+RSPE+ +R
Sbjct: 663 NKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESHLR 722
Query: 596 MANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDL 655
+ +LE +MR K +LD R+VT+VENAYY C PP V K RPPL +Y+RKLL+ DL
Sbjct: 723 TSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYVRKLLYKDL 782
Query: 656 DKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAV 713
K + E VLRQ+RKLPW D E Y++ C + + KY IH +A+L AGL Y ++ +
Sbjct: 783 SKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDVGI 842
Query: 714 AVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
VVD VLE+IRLG+E+N QRR++ +FLGELYNY V+S+VIF TLY FG
Sbjct: 843 HVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFG 899
>gi|344277688|ref|XP_003410632.1| PREDICTED: regulator of nonsense transcripts 2-like [Loxodonta
africana]
Length = 1269
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 291/719 (40%), Positives = 416/719 (57%), Gaps = 50/719 (6%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
+ +CSL HQRY DF+P L+ K F E ++ K R+ L+ + EL +G
Sbjct: 222 VHLCSLFHQRYADFAPSLLQVWKKHF------EARKEEKTPNITKLRTDLRFIAELTIVG 275
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGL---PLSGPGQEI 176
I D I + L +I + DR++ T+++++ SF R G GL + G ++
Sbjct: 276 IFTDKEGLSLIYEQLKNIIN-ADRES-HTHVSVVISFCRHCGDDIAGLVPRKVKGAAEKF 333
Query: 177 YEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEE 236
F I+ ++++ F+ Y+ ++ + L+ +H L+ E +N +IL++KGELSE+
Sbjct: 334 NLSFPPSEIISPEKQQPFQNLLKEYFTSLTKHLKRDHRELQNTERQNRRILHSKGELSED 393
Query: 237 NSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTS-GEDA-SPASGKDSSV 294
YE+ SY L N SLA+ LD P +P+D T G D +P + +
Sbjct: 394 RHKQYEEFAMSYQKLLANSQSLADLLDENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDL 453
Query: 295 PEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLA 354
+W+DE+ R FYE L DL+AFVPA+L K NE S Q DP + +
Sbjct: 454 EGGIWEDEDARNFYENLIDLKAFVPAILF-----KDNEKSC----QNKDPNKDDSKEAKE 504
Query: 355 AQDTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDK 414
++ E+S+ E +++E D E E G D +A+D K
Sbjct: 505 CKENKELSSPDELELELENLEINDDSLELE-------------GGD-------EAEDLTK 544
Query: 415 EKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCY-LNSKSNR 473
+ E++ E + + LK + +DA LQ+LP CV+RDLID+ ++FC +N+K+NR
Sbjct: 545 KLLDEQEQEDEEASTGSHLKLI----VDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANR 600
Query: 474 KRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIE 533
K+LVRALF VPR L+LLP+Y+R+VATL CM DV+ L ML +F F + KKDQ+NIE
Sbjct: 601 KKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINIE 660
Query: 534 TKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETS 593
TK + +RFIGEL KFK+ CLK L DF+HH+I++AC LLETCGRFL+RSPE+
Sbjct: 661 TKNKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESH 720
Query: 594 IRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFS 653
+R + +LE +MR K +LD R+VT+VENAYY C PP V K RPPL +Y+RKLL+
Sbjct: 721 LRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPLAEKTVKKKRPPLQEYVRKLLYK 780
Query: 654 DLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEF 711
DL K + E VLRQ+RKLPW D E Y++ C + V KY IH +A+L AGL Y ++
Sbjct: 781 DLSKVTTEKVLRQMRKLPWQDQEVKDYVICCMINVWNVKYNSIHCVANLLAGLVLYQEDV 840
Query: 712 AVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
+ VVD VLE+IRLG+E+N QRR++ +FLGELYNY V+S+VIF TLY FG
Sbjct: 841 GIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFG 899
>gi|345793473|ref|XP_003433764.1| PREDICTED: regulator of nonsense transcripts 2 [Canis lupus
familiaris]
gi|345793475|ref|XP_544258.3| PREDICTED: regulator of nonsense transcripts 2 isoform 1 [Canis
lupus familiaris]
Length = 1271
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 289/719 (40%), Positives = 418/719 (58%), Gaps = 50/719 (6%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
+ +CSL HQRY DF+P L+ K F E ++ K R+ L+ + EL +G
Sbjct: 222 VHLCSLFHQRYADFAPSLLQVWKKHF------EARKEEKTPNITKLRTDLRFIAELTIVG 275
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGL---PLSGPGQEI 176
I D I + L +I + DR++ T+++++ SF R G GL + ++
Sbjct: 276 IFTDKEGLSLIYEQLKNIIN-ADRES-HTHVSVVISFCRHCGDDIAGLVPRKVKSAAEKF 333
Query: 177 YEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEE 236
F I+ ++++ F+ Y+ ++ + L+ +H L+ E +N +IL++KGELSE+
Sbjct: 334 NLSFPPSEIISPEKQQPFQNLLKEYFTSLTKHLKRDHRELQNTERQNRRILHSKGELSED 393
Query: 237 NSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTS-GEDA-SPASGKDSSV 294
YE+ SY L N SLA+ LD P +P+D T G D +P + +
Sbjct: 394 RHKQYEEFAMSYQKLLANSQSLADLLDENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDL 453
Query: 295 PEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLA 354
+W+DE+ R FYE L DL+AFVPA+L K NE S + + D + E +
Sbjct: 454 EGGIWEDEDARNFYENLIDLKAFVPAILF-----KDNEKSCQNKDSNKDDSKEAKE---- 504
Query: 355 AQDTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDK 414
+D EVS +P+ D E + + + D + +G D +A+D K
Sbjct: 505 PKDNKEVS-----NPD--------DLELELENLEINDDALELEGGD-------EAEDLTK 544
Query: 415 EKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCY-LNSKSNR 473
+ E++ E + + LK + +DA LQ+LP CV+RDLID+ ++FC +N+K+NR
Sbjct: 545 KLLDEQEQEDEEASTGSHLKLI----VDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANR 600
Query: 474 KRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIE 533
K+LVRALF VPR L+LLP+Y+R+VATL CM DV+ L ML +F F + KKDQ+NIE
Sbjct: 601 KKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINIE 660
Query: 534 TKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETS 593
TK + +RFIGEL KFK+ CLK L DF+HH+I++AC LLETCGRFL+RSPE+
Sbjct: 661 TKNKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESH 720
Query: 594 IRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFS 653
+R + +LE +MR K +LD R+VT+VENAYY C PP V K RPPL +Y+RKLL+
Sbjct: 721 LRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYVRKLLYK 780
Query: 654 DLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEF 711
DL K + E VLRQ+RKLPW D E Y++ C + + KY IH +A+L AGL Y ++
Sbjct: 781 DLSKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDV 840
Query: 712 AVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
+ VVD VLE+IRLG+E+N QRR++ +FLGELYNY V+S+VIF TLY FG
Sbjct: 841 GIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFG 899
>gi|348521314|ref|XP_003448171.1| PREDICTED: regulator of nonsense transcripts 2-like [Oreochromis
niloticus]
Length = 1306
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 287/731 (39%), Positives = 416/731 (56%), Gaps = 80/731 (10%)
Query: 63 ICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIGII 122
+CSL HQRY +F+P L+ K F E ++ K R+ L+ + EL +G+
Sbjct: 226 LCSLFHQRYAEFAPLLLQAWKKHF------EARKEEKAPNVSKLRTDLRFIAELTIVGLF 279
Query: 123 EDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGL------------PL 169
D I + L +I DR+T T+++++ SF + G GL L
Sbjct: 280 TDKEGLSLIYEQLKNIIGA-DRET-HTHVSVVISFCKHCGDDIAGLVPRKVKLAAEKFGL 337
Query: 170 SGPGQEIYEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNA 229
+ P EI I++++++ F+ Y+ ++ + L+ +H L+ +E +N +IL++
Sbjct: 338 AFPPSEI---------ISSEKQQPFQNLLREYFTSLTKHLKKDHRELQNIERQNRRILHS 388
Query: 230 KGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPED--VHTTRVTSGEDASPA 287
KGELSE+ YE+ SY L N SLA+ LD P +P+D V + +P
Sbjct: 389 KGELSEDRHKQYEEFATSYQKLLANTQSLADLLDENMPELPQDKTVQEEHGPGIDIFTPG 448
Query: 288 SGKDSSVPEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASE 347
+ + +W+DE+ R FYE L DL+AFVPA+L + E
Sbjct: 449 KPGEYDLEGGIWEDEDARNFYENLVDLKAFVPAILFKDNE-------------------- 488
Query: 348 PDQGQLAAQDTAEVSADLGASPEGKSVEKGKD-KEEKEKEKAKDPDKEKGKGKDKEEKDK 406
S +GK E GKD +E K+ + + + + D ++
Sbjct: 489 -------------------KSSQGKEKEDGKDGREGKDAGSTTEELELELEALDITDEPL 529
Query: 407 EKAKDPDKEKGKEKDTERKVETEKEKLKGVEGTNL----DALLQRLPGCVSRDLIDQLTV 462
E + PD+ + +E + E E+E + G++L DA +Q+LP CV+RDLID+ +
Sbjct: 530 E-LEGPDEVENEELAKKLLDEQEQEDEEANTGSHLKLIVDAFIQQLPNCVNRDLIDKAAM 588
Query: 463 EFCY-LNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFN 521
+FC +N+KSNR++LVRALF VPR L+LLP+YSR+VATL CM DV+ L ML+ +F
Sbjct: 589 DFCMNMNTKSNRRKLVRALFTVPRQRLDLLPFYSRLVATLHPCMSDVAEDLCSMLKGDFR 648
Query: 522 FLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLET 581
F I KKDQ+NIETK + +RFIGEL KFK+ CLK L DFTHH+I++AC LLET
Sbjct: 649 FHIRKKDQINIETKNKTVRFIGELAKFKMFSKTDTLQCLKMLLSDFTHHHIEMACTLLET 708
Query: 582 CGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRP 641
CGRFL+RSP++ +R + +LE +MR K ++LD R+VT+VENAYY C PP V K RP
Sbjct: 709 CGRFLFRSPDSHLRTSVLLEQMMRKKQAQHLDARYVTMVENAYYYCNPPPMEKTVKKKRP 768
Query: 642 PLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIAS 699
PL +YI KLL+ DL K + E VLRQ+RKLPW D E SYL+ C + + KY IH +A+
Sbjct: 769 PLQEYICKLLYKDLSKVTTEKVLRQMRKLPWQDPEVKSYLICCMVNIWNVKYNSIHCVAN 828
Query: 700 LTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVI 759
L AGL Y ++ + VVD VLE+IRLG+E+N QRR++ +FLGELYNY V+S+VI
Sbjct: 829 LLAGLVAYQEDVGIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVI 888
Query: 760 FDTLYLILVFG 770
F TL+ + FG
Sbjct: 889 FRTLFSFISFG 899
>gi|363727406|ref|XP_417288.3| PREDICTED: regulator of nonsense transcripts 2 [Gallus gallus]
Length = 1270
Score = 477 bits (1227), Expect = e-131, Method: Compositional matrix adjust.
Identities = 288/728 (39%), Positives = 416/728 (57%), Gaps = 67/728 (9%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
+ +CSL HQRY DF+P L+ K F E ++ K R+ L+ + EL +G
Sbjct: 222 VHLCSLFHQRYADFAPSLLQAWKKHF------EARKEEKTPNITKLRTDLRFIAELTIVG 275
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGL------------ 167
I D I + L +I + DR++ T+++++ SF R G GL
Sbjct: 276 IFTDKEGLSLIYEQLKNIIN-ADRES-HTHVSVVISFCRHCGDDIAGLVPRKVKTVAEKF 333
Query: 168 PLSGPGQEIYEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKIL 227
LS P EI I+ ++++ F+ Y+ ++ + L+ +H L+ +E +N +IL
Sbjct: 334 NLSFPPSEI---------ISPEKQQPFQNLLKEYFTSLTKHLKRDHRELQNIERQNRRIL 384
Query: 228 NAKGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTS-GEDA-S 285
++KGELSE+ YE+ SY L N SLA+ LD P +P+D T G D +
Sbjct: 385 HSKGELSEDRHKQYEEFAMSYQKLLANSQSLADILDENMPDLPQDKPTPEEHGPGIDIFT 444
Query: 286 PASGKDSSVPEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPA 345
P + + +W+DE+ R FYE L DL+AFVPA+L + E +
Sbjct: 445 PGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPAILFKDNEKCS--------------- 489
Query: 346 SEPDQGQLAAQDTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKD 405
Q + A++D + S D + E + + E + + DP E
Sbjct: 490 ----QSKDASKDESRDSKDAKDNKEAAPGSEDLELELENLDINDDP---------LELDC 536
Query: 406 KEKAKDPDKEKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFC 465
++A+D K+ E++ E + + LK + +DA LQ+LP CV+RDLID+ ++FC
Sbjct: 537 GDEAEDLTKKLLDEQEQEDEEASTGSHLKLI----VDAFLQQLPNCVNRDLIDKAAMDFC 592
Query: 466 Y-LNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLI 524
+N+K+NR++LVRALF VPR L+LLP+Y+R+VATL CM DV+ L ML+ +F F +
Sbjct: 593 MNMNTKANRRKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLKGDFRFHV 652
Query: 525 NKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGR 584
KKDQ+NIETK + +RFIGEL KFK+ CLK L DF+HH+I++AC LLETCGR
Sbjct: 653 RKKDQINIETKNKTVRFIGELTKFKMFSKNDTLHCLKMLLSDFSHHHIEMACTLLETCGR 712
Query: 585 FLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLH 644
FL+RSPE+ +R + +LE +MR K +LD R+VT+VENAYY C PP V K RPPL
Sbjct: 713 FLFRSPESHLRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQ 772
Query: 645 QYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTA 702
+YIRKLL+ DL K + E VLRQ+RKLPW D E Y++ C + + KY IH +A+L A
Sbjct: 773 EYIRKLLYKDLSKVTTEKVLRQMRKLPWQDTEVKDYVICCMINIWNVKYNSIHCVANLLA 832
Query: 703 GLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDT 762
GL Y ++ + VVD VLE+IRLG+E+N QRR++ +FLGELYNY V+S+VIF T
Sbjct: 833 GLVLYQEDVGIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRT 892
Query: 763 LYLILVFG 770
LY FG
Sbjct: 893 LYSFTSFG 900
>gi|417406277|gb|JAA49803.1| Putative nonsense-mediated mrna decay 2 protein [Desmodus rotundus]
Length = 1272
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 287/719 (39%), Positives = 413/719 (57%), Gaps = 49/719 (6%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
+ +CSL HQRY DF+P L+ K F E ++ K R+ L+ + EL +G
Sbjct: 222 VHLCSLFHQRYVDFAPSLLQVWKKHF------EARKEEKTPNITKLRTDLRFIAELTIVG 275
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGL---PLSGPGQEI 176
I D I + L +I + DR++ T+++++ SF R G GL + ++
Sbjct: 276 IFTDKEGLSLIYEQLKNIIN-ADRES-HTHVSVVISFCRHCGDDIAGLVPRKVKSAAEKF 333
Query: 177 YEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEE 236
F I+ ++++ F+ Y+ ++ + L+ +H L+ E +N +IL++KGELSE+
Sbjct: 334 NLTFPPSEIISPEKQQPFQNLLKEYFTSLTKHLKRDHRELQNTERQNRRILHSKGELSED 393
Query: 237 NSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTS-GEDA-SPASGKDSSV 294
YE+ SY L N SLA+ LD P +P+D T G D +P + +
Sbjct: 394 RHKQYEEFAMSYQKLLANSQSLADLLDENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDL 453
Query: 295 PEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLA 354
+W+DE+ R FYE L DL+AFVPA+L K NE S + E D
Sbjct: 454 EGGIWEDEDARNFYENLIDLKAFVPAILF-----KDNEKSCQNKECNKD----------- 497
Query: 355 AQDTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDK 414
+ A+ + K V D E + + + D + +G D+ A+D K
Sbjct: 498 -----DSKAEAKEPKDHKEVSNPDDLELELENLEINDDSLELEGADE-------AEDLTK 545
Query: 415 EKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCY-LNSKSNR 473
+ E++ E + + LK + +DA LQ+LP CV+RDLID+ ++FC +N+K+NR
Sbjct: 546 KLLDEQEQEDEEASTGSHLKLI----VDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANR 601
Query: 474 KRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIE 533
K+LVRALF VPR L+LLP+Y+R+VATL CM DV+ L ML +F F + KKDQ+NIE
Sbjct: 602 KKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINIE 661
Query: 534 TKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETS 593
TK + +RFIGEL KFK+ CLK L DF+HH+I++AC LLETCGRFL+RSPE+
Sbjct: 662 TKNKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESH 721
Query: 594 IRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFS 653
+R + +LE +MR K +LD R+VT+VENAYY C PP V K RPPL +Y+RKLL+
Sbjct: 722 LRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYVRKLLYK 781
Query: 654 DLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEF 711
DL K + E VLRQ+RKLPW D E Y++ C + + KY IH +A+L AGL Y ++
Sbjct: 782 DLSKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDV 841
Query: 712 AVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
+ VVD VLE+IRLG+E+N QRR++ +FLGELYNY V+S+VIF TLY FG
Sbjct: 842 GIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFG 900
>gi|144583659|gb|ABP01543.1| UPF2, partial [Nicotiana attenuata]
Length = 369
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 259/385 (67%), Positives = 308/385 (80%), Gaps = 18/385 (4%)
Query: 66 LLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIGIIEDS 125
LLHQRYKDFSP L+ GL+KVFFPGK+ ED+DAD+N +AMKKRSTLKLLLELYF+G+++D+
Sbjct: 1 LLHQRYKDFSPSLVQGLVKVFFPGKATEDVDADKNARAMKKRSTLKLLLELYFVGVVDDT 60
Query: 126 SIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQGRIFLGLPLSGPGQEIYEEFFKGLN 185
IF+NI+KDLT++EHLKDRD TQTNL+LLASFARQGR LGLPLS GQ+I EEFFK LN
Sbjct: 61 GIFVNIVKDLTNVEHLKDRDATQTNLSLLASFARQGRYLLGLPLS--GQDILEEFFKALN 118
Query: 186 ITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLR 245
+T DQK+ F+K F TYY+A ELLQ+EH SLRQME+ENAK L+AKGEL+EEN+S+YEK R
Sbjct: 119 VTTDQKRFFRKVFQTYYDAAVELLQSEHASLRQMEHENAKTLSAKGELNEENASAYEKQR 178
Query: 246 KSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDA-SPASGKDSSVPEPVWDDEET 304
K+YD LYR +S LAEALDMQPPVMPED HTTRVTSG+DA SP + KDSSV E +WDDE+T
Sbjct: 179 KAYDQLYRGISGLAEALDMQPPVMPEDGHTTRVTSGDDASSPGASKDSSVLEALWDDEDT 238
Query: 305 RAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTAEVSAD 364
RAFYECLPDLRAFVPAVLLGEAE K++E +K E D ASE D+ Q AA +TAE + D
Sbjct: 239 RAFYECLPDLRAFVPAVLLGEAEPKSSEQPLKAQEHSIDSASEADEAQTAAVETAEGAVD 298
Query: 365 LGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEKDTER 424
GA E ++ +KG+DK+EK+KEK K EK K+ DKEK KEK+ ER
Sbjct: 299 AGAVQEDRN-DKGRDKDEKDKEKTK--------------DKDEKDKETDKEKTKEKEAER 343
Query: 425 KVETEKEKLKGVEGTNLDALLQRLP 449
K E +KEK +GVEG NLD LLQRLP
Sbjct: 344 KGEGDKEKARGVEGANLDGLLQRLP 368
>gi|47209457|emb|CAF92436.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1339
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 287/724 (39%), Positives = 419/724 (57%), Gaps = 62/724 (8%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
+ +CSL HQRY +F+ L+ K F E D+ K R+ L+ + EL +G
Sbjct: 222 VHLCSLFHQRYAEFASLLLQAWKKHF------EARKEDKAPNVSKLRTDLRFIAELTIVG 275
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGLPLSGPGQEIYEE 179
I D I + L +I DR+T T+++++ SF + G GL + + E+
Sbjct: 276 IFTDKEGLSLIYEQLKNIIGT-DRET-HTHVSVVISFCKHCGDDVAGL-VPRKVKVAAEK 332
Query: 180 FFKGLN----ITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSE 235
F G I+ ++++ F+ Y+ ++ + L+ +H L+ +E +N +IL++KGELSE
Sbjct: 333 FGLGFPPSEIISTEKQQPFQNLLREYFTSLTKHLKKDHRELQNIERQNRRILHSKGELSE 392
Query: 236 ENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPED--VHTTRVTSGEDASPASGKDSS 293
+ YE+ SY L N SLA+ LD P +P+D V + +P +
Sbjct: 393 DRHKQYEEFATSYQKLLANTQSLADLLDENMPELPQDKTVQEDHGPGIDIFTPGKPGEYD 452
Query: 294 VPEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQL 353
+ +W+DE+ R FYE + DL+AFVPA+L K NE S + ++ D + +G+
Sbjct: 453 LEGGIWEDEDARNFYENMVDLKAFVPAILF-----KDNEKSSQSKDK--DETRDGKEGKD 505
Query: 354 AAQDTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPD 413
+ T E+ +L A + A +P + +G PD
Sbjct: 506 SVSTTEELELELEAL-----------------DIADEPLELEG---------------PD 533
Query: 414 KEKGKEKDTERKVETEKEKLKGVEGTNL----DALLQRLPGCVSRDLIDQLTVEFCY-LN 468
+ + +E + E E+E + G++L DA +Q+LP CV+RDLID+ ++FC +N
Sbjct: 534 EAENEELAKKLLDEQEQEDEEANTGSHLKLIVDAFIQQLPNCVNRDLIDKAAMDFCMNMN 593
Query: 469 SKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKD 528
+K+NR++LVRALF VPR L+LLP+YSR+VATL CM DV+ L ML+ +F F I KKD
Sbjct: 594 TKANRRKLVRALFTVPRQRLDLLPFYSRLVATLHPCMCDVAEDLCSMLKGDFRFHIRKKD 653
Query: 529 QMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYR 588
Q+NIETK + +RFIGEL KFK+ CLK L DFTHH+I++AC LLETCGRFL+R
Sbjct: 654 QINIETKNKTVRFIGELAKFKMFSKTDTLQCLKMLLSDFTHHHIEMACTLLETCGRFLFR 713
Query: 589 SPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIR 648
SP++ +R + +LE +MR K ++LD R+VT+VENAYY C PP V K RPPL +YIR
Sbjct: 714 SPDSHLRTSVLLEQMMRKKQAQHLDARYVTMVENAYYYCNPPPVEKMVKKKRPPLQEYIR 773
Query: 649 KLLFSDLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSR 706
KLL+ DL K + E VLRQ+RKLPW D E YL+ C + + KY IH +A+L AGL
Sbjct: 774 KLLYKDLSKVTTEKVLRQMRKLPWQDPEVKGYLICCMVNIWNVKYNSIHCVANLLAGLVA 833
Query: 707 YHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLI 766
Y ++ + VVD VLE+IRLG+E+N QRR++ +FLGELYNY V+S+VIF TLY
Sbjct: 834 YQEDVGIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSF 893
Query: 767 LVFG 770
+ FG
Sbjct: 894 ISFG 897
>gi|327282906|ref|XP_003226183.1| PREDICTED: regulator of nonsense transcripts 2-like [Anolis
carolinensis]
Length = 1271
Score = 473 bits (1217), Expect = e-130, Method: Compositional matrix adjust.
Identities = 287/720 (39%), Positives = 412/720 (57%), Gaps = 52/720 (7%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
+ +CSL HQRY DF+P L+ + K F + E + K R+ L+ + EL +G
Sbjct: 222 VHLCSLFHQRYADFAPSLLQ-VWKKHFEARKEEKMP-----NITKLRTDLRFIAELTIVG 275
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGL---PLSGPGQEI 176
I D I + L +I + DR+T T+++++ SF R G GL + G +
Sbjct: 276 IFTDKEGLSLIYEQLKNIIN-ADRET-HTHVSVVISFCRHCGDDIAGLVPRKVKGAADKF 333
Query: 177 YEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEE 236
F I+ ++++ F+ Y+ ++ + L+ +H L+ +E +N +IL++KGELSE+
Sbjct: 334 NLSFPPSEIISPEKQQPFQNLLKEYFTSLTKHLKRDHRELQNIERQNRRILHSKGELSED 393
Query: 237 NSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPED--VHTTRVTSGEDASPASGKDSSV 294
YE+ SY L N SLA+ LD P +P++ V + +P + +
Sbjct: 394 RHKQYEEFAMSYQKLLANSQSLADLLDENMPDLPQEKPVPEEHGPGIDIFTPGKPGEYDL 453
Query: 295 PEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLA 354
+W+DE+ R FYE L DL+AFVPA+L + E Q D + E
Sbjct: 454 DGGIWEDEDARNFYENLIDLKAFVPAILFKDNEK---------CSQNKDSSKE------- 497
Query: 355 AQDTAEVSADLGASPEGKSVEKGKDKE-EKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPD 413
DT E L + E + V +D E + E D E G + E D
Sbjct: 498 --DTKE----LKEAKENRDVSGTEDLELDLENLDINDDTLELDCGDETE--------DLT 543
Query: 414 KEKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCY-LNSKSN 472
K+ E++ E + + LK + +DA LQ+LP CV+RDLID+ ++FC +N+K+N
Sbjct: 544 KKLLDEQEQEDEETSTGSHLKLI----VDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKAN 599
Query: 473 RKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNI 532
R++LVRALF VPR L+LLP+Y+R+V TL CM DV+ L ML+ +F F + KKDQ+NI
Sbjct: 600 RRKLVRALFIVPRQRLDLLPFYARLVGTLHPCMSDVAEDLCSMLKGDFRFHVRKKDQINI 659
Query: 533 ETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPET 592
ETK + +RFIGEL KFK+ CLK L DF+HH+I++AC LLETCGRFL+RSPE+
Sbjct: 660 ETKNKTVRFIGELTKFKMFSKSDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPES 719
Query: 593 SIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLF 652
+R + +LE +MR K +LD R+VT+VENAYY C PP V K RPPL +YIRKLL+
Sbjct: 720 HLRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYIRKLLY 779
Query: 653 SDLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDE 710
DL K + E VLRQ+RKLPW D E Y++ C + + KY IH +A+L AGL Y ++
Sbjct: 780 KDLSKVTTEKVLRQMRKLPWHDPEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQED 839
Query: 711 FAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
+ VVD VLE+IRLG+E+N QRR++ +FLGELYNY V+S+VIF TLY FG
Sbjct: 840 VGIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFG 899
>gi|384253855|gb|EIE27329.1| ARM repeat-containing protein [Coccomyxa subellipsoidea C-169]
Length = 1214
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 288/764 (37%), Positives = 423/764 (55%), Gaps = 112/764 (14%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
+++ SLLHQRY +FS LI L VF P D + +R+ A ++RS L+LL EL +G
Sbjct: 202 VEVISLLHQRYAEFSGELIAKLYDVFIPAT--RDAEDERSSLA-RRRSALRLLCELLLVG 258
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQGRI-FLGLPLSGPG------ 173
+ ++ + + + L + E +D Q L+LLA FA+ R+ FLG P P
Sbjct: 259 VHHNTLPLVAVARRLAAAEFERDPAGAQAALSLLAGFAKWHRVEFLGFPRRPPAELPPEA 318
Query: 174 -----------------------QEIYEE-FFKGLNITADQKKIFKKAFHTYYNAVQELL 209
Q YEE + D +++F A ++ E L
Sbjct: 319 LPQADGAEEPQEMREARSQQAVEQAAYEEQAASAFMPSKDSQELFMAAMTRAFDCGCEAL 378
Query: 210 QAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVM 269
+H +L + E++N ++LN +GEL EE +++YEK KS++ L R+++SLAE+L+ P +
Sbjct: 379 LRDHAALARTEHDNERVLNNRGELPEEMAAAYEKQHKSFEALQRSLASLAESLERDMPAL 438
Query: 270 PEDVHTTRVTSGEDA----SPASGKD-SSVPEPVWDDEETRAFYECLPDLRAFVPAVLLG 324
PE TTR T GE + + G+D S+ P ++DEETRA YE LPD+RA VPA+LLG
Sbjct: 439 PET--TTRFT-GEGSVSVITRQEGEDFSTGP---FEDEETRALYESLPDIRALVPALLLG 492
Query: 325 EAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTAEVSADLGASPEGKSVEKGKDKEEKE 384
AE + Q A +D AE ++ AS ++ + G +KE
Sbjct: 493 TAEAQ----------------------QTAEEDAAEQPMEVEASGADRAADAGAADTQKE 530
Query: 385 KEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEKDTERKVETEKEKLKGVEGTNLDAL 444
+ P + KG E A P + ++A+
Sbjct: 531 AAQETTPAESKGA---------EAAARPGR------------------------AEVEAV 557
Query: 445 LQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTC 504
+ LP SR+ D+L V FCY+NSK RKR+ RALF+ P + LL +YSR+ A+L+
Sbjct: 558 VACLPTLCSREECDELAVNFCYVNSKGARKRMARALFDAPEGAPHLLGFYSRVAASLAQV 617
Query: 505 MKDVSSMLIQMLEEEFNFLINKKD--QMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKA 562
D+++ L++ LEEEF L +KD Q ++E ++RN R++ EL KF++AP G FS LK
Sbjct: 618 FPDMAAALLRSLEEEFALLQARKDPTQRSLEARLRNARYLAELTKFRLAPFGTFFSLLKQ 677
Query: 563 CLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVEN 622
LDDF HN+D A L+ET GRFLYR PET R+ANML+++M+LKN +NLD R L++N
Sbjct: 678 LLDDFAGHNVDAAAALVETAGRFLYRLPETQTRIANMLDVMMKLKNSRNLDARQSMLLDN 737
Query: 623 AYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCESYLLKC 682
AYY +PPER K RPP+H+Y R L+ L ++ V R+LR+L W++ E+Y+++C
Sbjct: 738 AYYAVRPPERVGARRKRRPPVHEYARHLIHDRLATEQVKPVFRKLRRLAWAENEAYVVRC 797
Query: 683 FMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEE---------IRLGLELNDYG 733
+ KG++ + L+ASL AGLSRYH A+A+ D +LEE +R+GLE + G
Sbjct: 798 MLAAAKGRFDDLPLVASLAAGLSRYHPSLAIALPDALLEEANTNQWWLQVRVGLEAGEEG 857
Query: 734 MQ-QRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHGTAET 776
Q+R+ HMR LGELYNY +DS +FDTLY +L FGH + ET
Sbjct: 858 TSYQKRVGHMRLLGELYNYRIIDSRTVFDTLYTLLAFGHDSPET 901
>gi|189230302|ref|NP_001121475.1| UPF2 regulator of nonsense transcripts homolog [Xenopus (Silurana)
tropicalis]
gi|183985720|gb|AAI66247.1| LOC100158573 protein [Xenopus (Silurana) tropicalis]
Length = 1265
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 282/719 (39%), Positives = 410/719 (57%), Gaps = 54/719 (7%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
+ +CSL HQRY DF+ L+ K F E ++ K R+ L+ + EL IG
Sbjct: 219 VHLCSLFHQRYADFAQSLLQVWKKHF------EARKEEKTPNITKLRTDLRFIAELTIIG 272
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGL---PLSGPGQEI 176
I D I + L +I + DR++ T+++++ SF R G GL + ++
Sbjct: 273 IFTDKEGLSLIYEQLKNIINA-DRES-HTHVSVVISFCRHCGDDIAGLVPRKVKCAAEKY 330
Query: 177 YEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEE 236
F I+ ++++ F+ Y+ ++ + L+ +H L+ +E +N +IL+ KGELSE+
Sbjct: 331 NLNFPPSEIISPEKQQPFQNLLKEYFTSLTKHLKRDHRELQNIERQNRRILHTKGELSED 390
Query: 237 NSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTS-GEDA-SPASGKDSSV 294
YE+ SY L + SLA+ LD P +P+D G D +P D +
Sbjct: 391 RHKQYEEFATSYQKLLASCQSLADLLDENMPELPQDKPAPEEHGPGIDIFTPGKPGDYDL 450
Query: 295 PEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLA 354
+W+DE+ R FYE L DL+AFVPA+L K NE + + E G+ +
Sbjct: 451 EGGIWEDEDARNFYENLIDLKAFVPAILF-----KDNEKNSQSKET----------GKDS 495
Query: 355 AQDTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDK 414
+D+ E E + + E E E A+D A+D K
Sbjct: 496 FKDSKEKDVSTTEELELELETLDINDEGMELEGAED------------------AEDLTK 537
Query: 415 EKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCY-LNSKSNR 473
+ E++ E + + LK + +DA +Q+LP CV+RDLID+ ++FC +N+K+NR
Sbjct: 538 KLLDEQEQEDEEASTGSHLKLI----VDAFIQQLPNCVNRDLIDKAAMDFCMNMNTKANR 593
Query: 474 KRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIE 533
++LVRALF VPR L+LLP+Y+R+VATL CM DV+ L ML+ +F F + KKDQ+NIE
Sbjct: 594 RKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLKGDFRFHVRKKDQINIE 653
Query: 534 TKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETS 593
TK + +RFIGEL KFK+ CLK L DF+HH+I++AC LLETCGRFL+RSP++
Sbjct: 654 TKNKTVRFIGELAKFKMFSKTDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPDSH 713
Query: 594 IRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFS 653
+R + +LE +MR K +LD R+VT+VENAYY C PP V K RPPL +YIRKLL+
Sbjct: 714 LRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYIRKLLYK 773
Query: 654 DLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEF 711
DL K + E VLRQ+RKL W D E Y++ C + + KY IH +A+L AGL Y ++
Sbjct: 774 DLSKVTTEKVLRQMRKLSWQDPEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDV 833
Query: 712 AVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
+ VVD VLE+IRLG+E+N QRR++ +FLGELYNY V+S+VIF TLY + FG
Sbjct: 834 GIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFISFG 892
>gi|197246713|gb|AAI68584.1| LOC100158573 protein [Xenopus (Silurana) tropicalis]
Length = 1231
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 282/719 (39%), Positives = 410/719 (57%), Gaps = 54/719 (7%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
+ +CSL HQRY DF+ L+ K F E ++ K R+ L+ + EL IG
Sbjct: 185 VHLCSLFHQRYADFAQSLLQVWKKHF------EARKEEKTPNITKLRTDLRFIAELTIIG 238
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGL---PLSGPGQEI 176
I D I + L +I + DR++ T+++++ SF R G GL + ++
Sbjct: 239 IFTDKEGLSLIYEQLKNIINA-DRES-HTHVSVVISFCRHCGDDIAGLVPRKVKCAAEKY 296
Query: 177 YEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEE 236
F I+ ++++ F+ Y+ ++ + L+ +H L+ +E +N +IL+ KGELSE+
Sbjct: 297 NLNFPPSEIISPEKQQPFQNLLKEYFTSLTKHLKRDHRELQNIERQNRRILHTKGELSED 356
Query: 237 NSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTS-GEDA-SPASGKDSSV 294
YE+ SY L + SLA+ LD P +P+D G D +P D +
Sbjct: 357 RHKQYEEFATSYQKLLASCQSLADLLDENMPELPQDKPAPEEHGPGIDIFTPGKPGDYDL 416
Query: 295 PEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLA 354
+W+DE+ R FYE L DL+AFVPA+L K NE + + E G+ +
Sbjct: 417 EGGIWEDEDARNFYENLIDLKAFVPAILF-----KDNEKNSQSKET----------GKDS 461
Query: 355 AQDTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDK 414
+D+ E E + + E E E A+D A+D K
Sbjct: 462 FKDSKEKDVSTTEELELELETLDINDEGMELEGAED------------------AEDLTK 503
Query: 415 EKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCY-LNSKSNR 473
+ E++ E + + LK + +DA +Q+LP CV+RDLID+ ++FC +N+K+NR
Sbjct: 504 KLLDEQEQEDEEASTGSHLKLI----VDAFIQQLPNCVNRDLIDKAAMDFCMNMNTKANR 559
Query: 474 KRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIE 533
++LVRALF VPR L+LLP+Y+R+VATL CM DV+ L ML+ +F F + KKDQ+NIE
Sbjct: 560 RKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLKGDFRFHVRKKDQINIE 619
Query: 534 TKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETS 593
TK + +RFIGEL KFK+ CLK L DF+HH+I++AC LLETCGRFL+RSP++
Sbjct: 620 TKNKTVRFIGELAKFKMFSKTDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPDSH 679
Query: 594 IRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFS 653
+R + +LE +MR K +LD R+VT+VENAYY C PP V K RPPL +YIRKLL+
Sbjct: 680 LRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYIRKLLYK 739
Query: 654 DLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEF 711
DL K + E VLRQ+RKL W D E Y++ C + + KY IH +A+L AGL Y ++
Sbjct: 740 DLSKVTTEKVLRQMRKLSWQDPEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDV 799
Query: 712 AVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
+ VVD VLE+IRLG+E+N QRR++ +FLGELYNY V+S+VIF TLY + FG
Sbjct: 800 GIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFISFG 858
>gi|147903018|ref|NP_001089661.1| UPF2 regulator of nonsense transcripts homolog [Xenopus laevis]
gi|71681268|gb|AAI00231.1| MGC115246 protein [Xenopus laevis]
Length = 1264
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 281/719 (39%), Positives = 408/719 (56%), Gaps = 54/719 (7%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
+ +CSL HQRY DF+ L+ K F K ++ K R+ L+ + EL IG
Sbjct: 219 VHLCSLFHQRYADFAQSLLQVWKKHFEARKE------EKTPNITKLRTDLRFIAELTIIG 272
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGL---PLSGPGQEI 176
I D + L +I + DR+T T+++++ SF R G GL + ++
Sbjct: 273 IFTDKEGLSLNYEQLKNIINA-DRET-HTHVSVVISFCRHCGDDIAGLVPRKVKCAAEKY 330
Query: 177 YEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEE 236
F I ++++ F+ Y+ ++ + L+ +H L+ +E +N +IL+ KGELSE+
Sbjct: 331 NLNFPPSEIINPEKQQPFQNLLKEYFTSLTKHLKRDHRELQNIERQNRRILHTKGELSED 390
Query: 237 NSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTS-GEDA-SPASGKDSSV 294
YE+ SY L + SLA+ LD P +P+D G D +P D +
Sbjct: 391 RHKQYEEFATSYQKLLASCQSLADLLDENMPELPQDKPAPEEHGPGIDIFTPGKPGDYDL 450
Query: 295 PEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLA 354
+W+DE+ R FYE L DL+AFVPA+L K NE S + E G+
Sbjct: 451 EGGIWEDEDARNFYENLIDLKAFVPAILF-----KDNEKSSQSKET----------GKDN 495
Query: 355 AQDTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDK 414
+DT E E + + + E E A+D A+D K
Sbjct: 496 VKDTKEKDVPTTEELELELETLDINDDGIEMEGAED------------------AEDLTK 537
Query: 415 EKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCY-LNSKSNR 473
+ E++ E + + LK + +DA +Q+LP CV+RDLID+ ++FC +N+K+NR
Sbjct: 538 KLLDEQEQEDEEASTGSHLKLI----VDAFIQQLPNCVNRDLIDKAAMDFCMNMNTKANR 593
Query: 474 KRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIE 533
++LVRALF VPR L+LLP+Y+R+VATL CM D++ L ML+ +F F + KKDQ+NIE
Sbjct: 594 RKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDIAEDLCSMLKGDFRFHVRKKDQINIE 653
Query: 534 TKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETS 593
TK + +RFIGEL KFK+ CLK L DF+HH+I++AC LLETCGRFL+RS ++
Sbjct: 654 TKNKTVRFIGELAKFKMFNKTDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSSDSH 713
Query: 594 IRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFS 653
+R + +LE +MR K +LD R+VT+VENAYY C PP V K RPPL +YIRKLL+
Sbjct: 714 LRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYIRKLLYK 773
Query: 654 DLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEF 711
DL K + E VLRQ+RKL W D E +Y++ C + + KY IH +A+L AGL Y ++
Sbjct: 774 DLSKVTTEKVLRQMRKLSWQDLEVKNYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDV 833
Query: 712 AVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
+ VVD VLE+IRLG+E+N QRR++ ++FLGELYNY V+S+VIF TLY + FG
Sbjct: 834 GIHVVDGVLEDIRLGMEVNQPKFNQRRISSVKFLGELYNYRMVESAVIFRTLYSFIFFG 892
>gi|427785343|gb|JAA58123.1| Putative nonsense-mediated mrna decay 2 protein [Rhipicephalus
pulchellus]
Length = 1264
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 283/724 (39%), Positives = 406/724 (56%), Gaps = 61/724 (8%)
Query: 63 ICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIGII 122
+CS LHQRY +FS L++ LK P K D+ K R L+ EL G+
Sbjct: 206 VCSSLHQRYAEFSTQLLENWLKAL-PLKKD-----DKATNLSKIRVDLRFFAELLACGVF 259
Query: 123 ---EDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGLPLSGPGQEIYE 178
E + N++ LTS DR+ NL +L SF + G F GL + + + +
Sbjct: 260 TQKEGLPVLRNLLTFLTS----SDREE-HNNLNILISFCKHCGEDFAGL-VPRRIRILAQ 313
Query: 179 EFFKGLNI----TADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELS 234
++ + + + T D++K + YY ++ L +H +LR +E N ++L KGELS
Sbjct: 314 KYIRDVPVSDLLTPDKQKSLQSILREYYRSLCRHLLRDHQNLRGIEAHNRRVLQTKGELS 373
Query: 235 EENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMP-EDVHT--TRVTSGEDASPASGKD 291
E E ++ L A+ LD P +P E++ T T + + + G +
Sbjct: 374 GEQKEKCEAAHLAFQKLLTGTQQFADVLDEDVPDLPLEEISTMETDAATLDIHNRFKGGE 433
Query: 292 SSVPEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQG 351
+W+DEE+R+FYE LPDL+AF+P +L ++ +V +E+P D + E D
Sbjct: 434 LDGSSSLWEDEESRSFYENLPDLKAFIPGILFKDSAQATTTSTVTTVEEPADLSLEEDLQ 493
Query: 352 QLAAQDTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKD 411
+L + E+ E+EKE A+ + K + KD E ++ +
Sbjct: 494 KLEMECALEI--------------------EEEKENARLDNGCKIEEKDLTETLLQEIEA 533
Query: 412 PDKEK--GKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCY-LN 468
PD+E G T K+ LD L L CVSR+++DQ +FC LN
Sbjct: 534 PDEEPAPGTGPGTANKLL-------------LDGFLNSLLHCVSREMVDQAAEQFCMSLN 580
Query: 469 SKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKD 528
+K NR +L++ALF VPRT L+LLP+Y+R VATL+ CM DV++ L+ ML+++F F + KKD
Sbjct: 581 TKPNRNKLIKALFLVPRTRLDLLPFYARFVATLAPCMPDVATDLVSMLKQDFKFHLKKKD 640
Query: 529 QMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYR 588
Q+NIE+K++ +RFIGEL KF I P CLK L DF+HH I++ACNLLETCGRFL+R
Sbjct: 641 QINIESKVKTMRFIGELVKFNIFPKSDALYCLKNLLLDFSHHYIEMACNLLETCGRFLFR 700
Query: 589 SPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIR 648
SPE+ R LE +MR K V+ LD R++T++ENA+Y C PPE V VRPPLH+YIR
Sbjct: 701 SPESHQRTKVYLEQMMRKKAVQALDSRYITMIENAFYYCNPPEAPMSVRAVRPPLHEYIR 760
Query: 649 KLLFSDLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSR 706
KLL+ DL KS+ E +LRQ+RKL W D E +Y KC + + KY I +A+L AGL
Sbjct: 761 KLLYKDLTKSNTEKILRQMRKLDWEDPEVCAYATKCLVAIWNVKYYNIRCMANLLAGLVA 820
Query: 707 YHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLI 766
YH+ VVD VLE+IRLG+E+N QRR++ + +LGELYNY V+SSVIF LY
Sbjct: 821 YHETVGPQVVDGVLEDIRLGMEVNHPKYNQRRVSVVHYLGELYNYRMVESSVIFKVLYSF 880
Query: 767 LVFG 770
+ FG
Sbjct: 881 ITFG 884
>gi|241262615|ref|XP_002405377.1| regulator of nonsense transcripts, putative [Ixodes scapularis]
gi|215496784|gb|EEC06424.1| regulator of nonsense transcripts, putative [Ixodes scapularis]
Length = 1125
Score = 454 bits (1167), Expect = e-124, Method: Compositional matrix adjust.
Identities = 279/729 (38%), Positives = 404/729 (55%), Gaps = 66/729 (9%)
Query: 63 ICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIGII 122
+CS LHQRY +FS L++ +K P K D+ K R L+ EL G+
Sbjct: 82 VCSALHQRYAEFSTQLLENWVKAL-PLKKD-----DKTTNLSKIRVDLRFFAELLSSGVF 135
Query: 123 EDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGLPLSGPGQEIYEEFF 181
+ ++K+L + DRD +NL +L SF + G F GL +S +++ E+
Sbjct: 136 TQKE-GLPVLKNLLTFLTTSDRDD-HSNLNILLSFCKHCGDDFAGL-VSRRVRQLAEKHR 192
Query: 182 KGLN----ITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEEN 237
L + +++K + Y+ ++ L +H +L+ +E N ++L KGELS +
Sbjct: 193 YALPSSDFLAPEKQKGVQALLREYFRSLCRHLLRDHKNLQSLERHNRRVLQTKGELSTDQ 252
Query: 238 SSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPAS---GKDSSV 294
E ++ L LA+ LD + P +P + TT + G + + G +
Sbjct: 253 REKCEATHLAFQKLLTGTQQLADILDEELPDLPLEEMTTLDSDGANLDVHNRFKGGELDG 312
Query: 295 PEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLA 354
+W+DEETR+FYE LPDL+AF+P +L ++ N +V LE+P + + E +G
Sbjct: 313 TTSLWEDEETRSFYESLPDLKAFIPGILFKDSAQATNNVTV--LEEPAEVSLEEGEGMF- 369
Query: 355 AQDTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDK 414
QD P +K + + E +++K D
Sbjct: 370 -QDL--------------------------------PYLQKLEIEGILEIEEDKEGKSDA 396
Query: 415 EKGKEKD-TE---RKVETEKEKLKGVEGTN------LDALLQRLPGCVSRDLIDQLTVEF 464
K +EKD TE +++E +E+ G LD + L CVSR+++DQ +F
Sbjct: 397 GKTEEKDLTETLLQEIEAPEEEASAGSGPGMANKLLLDGFISSLLHCVSREMVDQAAEQF 456
Query: 465 CY-LNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFL 523
C LN+K NR +L++ALF VPRT L+LLP+Y+R VATL+ CM DV++ L+ ML+++F F
Sbjct: 457 CMNLNTKPNRNKLIKALFLVPRTRLDLLPFYARFVATLTPCMPDVANDLVGMLKQDFKFH 516
Query: 524 INKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCG 583
I KKDQ+NIE+K++ +RFIGEL KF I P CLK L DFTHH I++ACNLLETCG
Sbjct: 517 IKKKDQINIESKVKTVRFIGELVKFNIFPKSEALFCLKMLLFDFTHHYIEMACNLLETCG 576
Query: 584 RFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPL 643
RFL+RSP+ R LE +MR K V+ LD R+ T++ENA+Y C PPE V KVRPPL
Sbjct: 577 RFLFRSPDAHQRTKVYLEQMMRKKAVQALDSRYTTMIENAFYYCNPPETPMSVKKVRPPL 636
Query: 644 HQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLT 701
H YIRKLL+ DL KS+ E +LRQ+RKL W D + +Y KC + + KY I +A+L
Sbjct: 637 HDYIRKLLYKDLTKSNTEKILRQMRKLDWEDPDVCAYATKCLIAIWNVKYYNIRCVANLL 696
Query: 702 AGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFD 761
AGL Y + VVD VLE+IRLG+E+N QRR++ + +LGELYNY V+SSVIF
Sbjct: 697 AGLVAYQETVGPQVVDGVLEDIRLGMEVNHPKYNQRRVSIVHYLGELYNYRMVESSVIFK 756
Query: 762 TLYLILVFG 770
LY + FG
Sbjct: 757 VLYSFITFG 765
>gi|260814065|ref|XP_002601736.1| hypothetical protein BRAFLDRAFT_215191 [Branchiostoma floridae]
gi|229287038|gb|EEN57748.1| hypothetical protein BRAFLDRAFT_215191 [Branchiostoma floridae]
Length = 1118
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 267/729 (36%), Positives = 403/729 (55%), Gaps = 68/729 (9%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
+ +CS HQRY +F+P L+ K F + ++ + R ++L+ EL G
Sbjct: 71 VHLCSKFHQRYAEFTPQLLQAWNKSFQARRDDKEEKKKEKGDKL--RVDIRLVAELTVAG 128
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGLPLSGPGQEIYEE 179
+ D + L ++ + NLT+L+SF R G + GL + + + ++
Sbjct: 129 VFTDKEGLPLVASQLKAL--IDGDKEAHNNLTILSSFCRHCGEDYAGL-VPRKNRSLADK 185
Query: 180 FFKGLNITADQKKIF--------KKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKG 231
+ N+ + ++F ++ Y+ ++ + LQ +H +L+ N + L KG
Sbjct: 186 Y----NVILPKSEVFPCEIQGKCRQLLKDYFTSLVKHLQKDHKALQNQAWNNRRTLQTKG 241
Query: 232 ELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPA-SGK 290
ELSEE S+E + +Y L N S+LA+ LD P +PED D A G
Sbjct: 242 ELSEERQKSFEDAQAAYQKLLMNASTLADLLDEDMPDLPEDDFKEEEEGNVDIFLAIKGG 301
Query: 291 DSSVPE-PVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPD 349
D + E +W+DEETR+FYE LP+L+ F+PA+L ++E K+NE + +E D
Sbjct: 302 DGEIGENTLWEDEETRSFYENLPNLKEFLPAILFKDSEKKSNEQEAE---------AEVD 352
Query: 350 QGQLAAQDTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKA 409
+DT E ++ E D + + E +
Sbjct: 353 ----TPEDTVEALEEVEVVEAEAEAEAEADADSSQAEMS--------------------V 388
Query: 410 KDPDKEK-GKEKDTERKVETEKEKLKGVEGTN----LDALLQRLPGCVSRDLIDQLTVEF 464
+D +KE G +D + E G G++ L+ LQ+LP CV+R+ ID +EF
Sbjct: 389 EDIEKEILGSVEDVDDDAE-------GASGSSTKMLLEGFLQQLPNCVNREFIDNAGLEF 441
Query: 465 CY-LNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFL 523
C +N+K+NR++LVRALF V RT ++LLP+YSR+VATL C DV+ L+ ML+ +F F
Sbjct: 442 CMNMNNKTNRRKLVRALFTVHRTRIDLLPFYSRLVATLQPCTPDVADDLVAMLKGDFKFH 501
Query: 524 INKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCG 583
+ KKDQ+N+E+K++ +RFIGE+ KF + P CLK L DF HH I++AC LLE+CG
Sbjct: 502 VRKKDQINLESKLKTVRFIGEMTKFSVFPKKETLHCLKMLLLDFRHHQIEMACALLESCG 561
Query: 584 RFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPL 643
RFLYRSP++ +R +LE +MR K V ++D R+ TL+ENA+Y C PPE K+RPP+
Sbjct: 562 RFLYRSPDSHLRTKVLLEQMMRKKMVMHMDERYTTLIENAFYYCNPPEVERAPIKIRPPM 621
Query: 644 HQYIRKLLFSDLDKSSIEHVLRQLRKLPWS--DCESYLLKCFMKVHKGKYGQIHLIASLT 701
H+YIRKLL+ DL K + E VLRQ+RKL W D Y +K +V KY +H +A++
Sbjct: 622 HEYIRKLLYKDLSKITTEKVLRQMRKLNWQEEDTCRYAIKSLTRVWNVKYNNVHCVANML 681
Query: 702 AGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFD 761
AGL Y + + +VD +LEEIRLG+E+ND QRR++ ++LGELYNY V+S+VIF
Sbjct: 682 AGLVPYQENVGILIVDGILEEIRLGMEINDPKYNQRRVSAAKYLGELYNYRLVESAVIFK 741
Query: 762 TLYLILVFG 770
TLY + FG
Sbjct: 742 TLYSFITFG 750
>gi|395539055|ref|XP_003771489.1| PREDICTED: regulator of nonsense transcripts 2 [Sarcophilus
harrisii]
Length = 1276
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 274/726 (37%), Positives = 399/726 (54%), Gaps = 57/726 (7%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
+ +CSL HQRY DF+P L+ K F E ++ K R+ L+ + EL +G
Sbjct: 222 VHLCSLFHQRYADFAPSLLQVWKKHF------EARKEEKTPNITKLRTDLRFIAELTIVG 275
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGL---PLSGPGQEI 176
I D I + L +I + DR++ T+++++ SF R G GL + G ++
Sbjct: 276 IFTDKEGLSLIYEQLKNIIN-ADRES-HTHVSVVISFCRHCGDDIAGLVPRKVKGAAEKF 333
Query: 177 YEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEE 236
F I+ ++++ F+ Y+ ++ + L+ +H L+ +E +N +IL++KGELSE+
Sbjct: 334 NLSFPPSEIISPEKQQPFQNLLKEYFTSLTKHLKRDHRELQNIERQNRRILHSKGELSED 393
Query: 237 NSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTS-GEDA-SPASGKDSSV 294
YE+ SY L N SLA+ LD P +P+D T G D +P + +
Sbjct: 394 RHKQYEEFAMSYQKLLANSQSLADLLDENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDL 453
Query: 295 PEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLA 354
+W+DE+ R FYE L DL+AFVPA+L K NE + + +
Sbjct: 454 EGGIWEDEDARNFYENLIDLKAFVPAILF-----KDNERTYQ-----------------S 491
Query: 355 AQDTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDK 414
E S + + K V D E + + + D + +G D +A+D K
Sbjct: 492 KDSNKEDSKESKEPKDNKDVSNTDDLELELENLEINDDTLELEGGD-------EAEDLTK 544
Query: 415 EKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRK 474
+ E++ E + + LK + +DA LQ+LP CV+RDLID+ L
Sbjct: 545 KLLDEQEQEDEEASTGSHLKLI----VDAFLQQLPNCVNRDLIDKTIGFVAILEDYIKLF 600
Query: 475 RLVRALF--------NVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINK 526
+ +R F + L+LLP+Y+R+VATL CM DV+ L ML+ +F F + K
Sbjct: 601 KWIRINFLGVCSKQIIIVYLRLDLLPFYARLVATLHPCMSDVAEDLCSMLKGDFRFHVRK 660
Query: 527 KDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFL 586
KDQ+NIETK + +RFIGEL KFK+ CLK L DF+HH+I++AC LLETCGRFL
Sbjct: 661 KDQINIETKNKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFL 720
Query: 587 YRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQY 646
+RSPE+ +R + +LE +MR K +LD R+VT+VENAYY C PP V K RPPL +Y
Sbjct: 721 FRSPESHLRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEY 780
Query: 647 IRKLLFSDLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGL 704
IRKLL+ DL K + E VLRQ+RKLPW D E Y++ C + + KY IH +A+L AGL
Sbjct: 781 IRKLLYKDLSKVTTEKVLRQMRKLPWQDPEVKDYVICCMINIWNVKYNSIHCVANLLAGL 840
Query: 705 SRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLY 764
Y ++ + VVD VLE+IRLG+E+N QRR++ +FLGELYNY V+S+VIF TLY
Sbjct: 841 VLYQEDVGIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLY 900
Query: 765 LILVFG 770
FG
Sbjct: 901 SFTSFG 906
>gi|428182301|gb|EKX51162.1| hypothetical protein GUITHDRAFT_134673 [Guillardia theta CCMP2712]
Length = 1205
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 241/574 (41%), Positives = 331/574 (57%), Gaps = 57/574 (9%)
Query: 201 YYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYRNVSSLAE 260
YY + +L H+SL+Q E EN + L +G+L E+ + EK R + N +L+E
Sbjct: 350 YYESTVSVLFEMHSSLKQQEKENRRQLTLRGDLPEDCMKATEKKRADLEKALSNTKTLSE 409
Query: 261 ALDMQPPVMPEDVH-TTRVTSGE--DASPASGKDSSVPEPVWDDEETRAFYECLPDLRAF 317
AL ++ P +P+D TTR+ G + ++ + + V++D +TR FYE LP++
Sbjct: 410 ALQVEMPELPKDPEDTTRLGGGAFVVGTQREREEENFEDNVFEDMDTRDFYEDLPNIFDL 469
Query: 318 VPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTAEVSADLGASPEGKSVEKG 377
VP++ ++V A S + E G
Sbjct: 470 VPSL------------------------------------NSDVEATKLKSSSENATEGG 493
Query: 378 KDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEKDTERKVETEKEKLKGVE 437
E+A P + G+ +E E + DT + E ++E + E
Sbjct: 494 --------EEASKPAADSSSGEPSKES---------SETSTQPDTANQEEDKEEDVNAAE 536
Query: 438 GTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRM 497
+ L L C SRDLIDQ FC N+K NR++L RAL+NVPRT+L L+PYY+R
Sbjct: 537 KAKWEEFLAHLATCQSRDLIDQAAQTFCSQNNKLNRRKLARALYNVPRTALSLIPYYARF 596
Query: 498 VATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVF 557
VA L+ D+ ML QMLE+EFN + K + NIE+K+RN+RF GEL KFK+A +F
Sbjct: 597 VAVLAPAFPDIGQMLSQMLEQEFNEFMKYKSESNIESKVRNVRFQGELLKFKVAKPLAIF 656
Query: 558 SCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHV 617
SCL+A +DDF + NI++ACNLLE CGRFLYR+ T R NML +MRLKN KNLD R
Sbjct: 657 SCLQAFIDDFAYQNIELACNLLEVCGRFLYRTKTTHERTKNMLNTMMRLKNAKNLDSRLD 716
Query: 618 TLVENAYYLCKPPERSARVS-KVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE 676
T+VENAYYLC+PPERSAR K RP + +YIR LLFS L KS++E V +QLRKL W + E
Sbjct: 717 TMVENAYYLCRPPERSARAQRKQRPAVQEYIRHLLFSKLSKSTLEFVKKQLRKLDWKENE 776
Query: 677 SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQ 736
SYL+KC +KV K KY QI+L+ASL +GL+ YH AV V D++L E+R L+ N++ QQ
Sbjct: 777 SYLIKCLLKVQKMKYNQIYLLASLISGLTSYHSTLAVYVADDLLSEMRYLLQANEFSKQQ 836
Query: 737 RRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
R L ++ LGELYN VDSS+IFD LY + G
Sbjct: 837 RLLGLVKLLGELYNDLVVDSSIIFDALYTFISSG 870
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 58/104 (55%), Gaps = 4/104 (3%)
Query: 60 FLKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGE---DLDADRNLKAMKKRSTLKLLLEL 116
+++ S+LHQRY DF+ LI L +F P + D ++DR + K+R+ L+LL EL
Sbjct: 113 MVQVVSVLHQRYADFTKQLIPKLSSIFQPVRKDSATVDSESDRKDRLTKRRTMLRLLTEL 172
Query: 117 YFIGIIEDSSIFINIIKDLTSIE-HLKDRDTTQTNLTLLASFAR 159
G+ D SI I+ +K+L + E + D T ++++ F +
Sbjct: 173 LVAGVYTDGSILISALKELIAQELQAQQLDAGATLFSIVSGFVK 216
>gi|196003028|ref|XP_002111381.1| hypothetical protein TRIADDRAFT_24207 [Trichoplax adhaerens]
gi|190585280|gb|EDV25348.1| hypothetical protein TRIADDRAFT_24207, partial [Trichoplax
adhaerens]
Length = 1052
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 260/731 (35%), Positives = 400/731 (54%), Gaps = 95/731 (12%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
++IC L+HQRY +F+ L+ G+ F K D D+++K + R TL+LL EL IG
Sbjct: 70 IQICCLMHQRYSEFATLLLKGMQSSFTETK-----DDDKSVKIARYRVTLRLLGELIIIG 124
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGLP----------- 168
+ +S+ +I+ S D+ T L ++ SF R F G+
Sbjct: 125 VFNESTNGTDILHSAFSGIITIDKATFDY-LPVVISFCRHFCEDFFGITPRKNRLLIEKF 183
Query: 169 -LSGPGQEIYEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKIL 227
P +I I+ ++KK F+ Y+ A+ + L+ +H +++M +N KIL
Sbjct: 184 NFQAPASKI---------ISDNKKKQFRLVVFDYHAALVKYLEKQHKEIQRMTRQNLKIL 234
Query: 228 NAKGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDA--- 284
+ KGEL+EE + EK +KS++ L+ + ++++ LD+ P +P+D S +
Sbjct: 235 HTKGELNEERKENLEKSKKSFEKLHVHTGTISDILDLDMPDLPQDEQLEEAESFGISLYC 294
Query: 285 -SPASGKDSSVPEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTD 343
PAS + +W+DEETR+FYE L DL+ +PA+L E+E D
Sbjct: 295 PFPASELNGDY---LWEDEETRSFYENLKDLKTLMPAILFKESESSG------------D 339
Query: 344 PASEPDQGQLAAQDTA-EVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKE 402
++E ++ + E ++ S E ++
Sbjct: 340 TSAESNEANFIQNNIKLETIDEISESIENLGIQ--------------------------- 372
Query: 403 EKDKEKAKDPDKEKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTV 462
D K+ E E KV+ L D L++L C +RD ID+
Sbjct: 373 --------DELKDNNPETSDESKVDESMTSL-------FDTYLRQLATCRNRDFIDEAAT 417
Query: 463 EFCY-LNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFN 521
EF N+K NRK LVR+LFNVPRT L+LLP+Y+R+VATL+ C ++ L ML ++F
Sbjct: 418 EFITNFNTKGNRKALVRSLFNVPRTRLDLLPFYARLVATLTACFSEIGPSLNVMLMKDFM 477
Query: 522 FLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLET 581
+ + KKDQ+++E KI+ RFIGEL KF+I CLK L++FTHH ID+AC LLET
Sbjct: 478 YRVRKKDQIHLEEKIKAARFIGELTKFRIISKDEALLCLKVALNNFTHHVIDMACCLLET 537
Query: 582 CGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRP 641
CGRFL R+P++ IR N+LE +MR+K+ ++L+ R+V ++ENAYY C PPE +VR
Sbjct: 538 CGRFLLRNPDSHIRTKNLLETMMRIKSARHLEERYVIMIENAYYHCLPPEDEK--VEVRT 595
Query: 642 PLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIAS 699
PL +YIR+L+ L +++E +LRQ RKL W++ E Y +K KY IH +A+
Sbjct: 596 PLQEYIRRLVIKHLITTNVEKILRQFRKLSWNNQEIADYAIKFLSSPWYIKYNNIHNLAN 655
Query: 700 LTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVI 759
L +GL+ Y ++ AV VVD ++EEIRLGLE+N + QRR+A +++LGELYNY+ +++ VI
Sbjct: 656 LLSGLAEYREDVAVMVVDNIMEEIRLGLEINAMKLNQRRIATIKYLGELYNYQMIEADVI 715
Query: 760 FDTLYLILVFG 770
F+TLY ++ FG
Sbjct: 716 FNTLYSLITFG 726
>gi|351702077|gb|EHB04996.1| Regulator of nonsense transcripts 2 [Heterocephalus glaber]
Length = 861
Score = 431 bits (1107), Expect = e-117, Method: Compositional matrix adjust.
Identities = 248/551 (45%), Positives = 338/551 (61%), Gaps = 38/551 (6%)
Query: 225 KILNAKGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTS-GED 283
+IL++KGELSE+ YE+ SY L N SLA+ LD P +P+D T G D
Sbjct: 11 RILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLLDENMPDLPQDKPTPEEHGPGID 70
Query: 284 A-SPASGKDSSVPEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPT 342
+P D + +W+DE+ R FYE L DL+AFVPA+L K NE S + E
Sbjct: 71 IFTPGKPGDYDLEGGIWEDEDARNFYENLIDLKAFVPAILF-----KDNEKSCQNKESNK 125
Query: 343 DPASEPDQGQLAAQDTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKE 402
D + E + +D EVS +P+ D E + + + D + +G D
Sbjct: 126 DDSKEAKE----PKDNKEVS-----NPD--------DLELELENLEINDDTLELEGGD-- 166
Query: 403 EKDKEKAKDPDKEKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTV 462
+A+D K+ E++ E + + LK + +DA LQ+LP CV+RDLID+ +
Sbjct: 167 -----EAEDLTKKLLDEQEQEDEEASTGSHLKLI----VDAFLQQLPNCVNRDLIDKAAM 217
Query: 463 EFCY-LNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFN 521
+FC +N+K+NRK+LVRALF VPR L+LLP+Y+R+VATL CM DV+ L ML +F
Sbjct: 218 DFCMNMNTKANRKKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFR 277
Query: 522 FLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLET 581
F + KKDQ+NIETK + +RFIGEL KFK+ CLK L DF+HH+I++AC LLET
Sbjct: 278 FHVRKKDQINIETKNKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLET 337
Query: 582 CGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRP 641
CGRFL+RSPE+ +R + +LE +MR K +LD R+VT+VENAYY C PP V K RP
Sbjct: 338 CGRFLFRSPESHLRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRP 397
Query: 642 PLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIAS 699
PL +Y+RKLL+ DL K + E VLRQ+RKLPW D E Y++ C + + KY IH +A+
Sbjct: 398 PLQEYVRKLLYKDLSKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVAN 457
Query: 700 LTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVI 759
L AGL Y ++ + VVD VLE+IRLG+E+N QRR++ +FLGELYNY V+S+VI
Sbjct: 458 LLAGLVLYQEDVGIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVI 517
Query: 760 FDTLYLILVFG 770
F TLY FG
Sbjct: 518 FRTLYSFTSFG 528
>gi|297300482|ref|XP_002805601.1| PREDICTED: regulator of nonsense transcripts 2-like [Macaca
mulatta]
Length = 1227
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 273/719 (37%), Positives = 395/719 (54%), Gaps = 71/719 (9%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
+ +CSL HQRY DF+P L+ K F E ++ K R+ L+ + EL +G
Sbjct: 223 VHLCSLFHQRYADFAPSLLQVWKKHF------EARKEEKTPNITKLRTDLRFIAELTIVG 276
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGL---PLSGPGQEI 176
I D I + L +I + DR++ T+++++ SF R G GL + ++
Sbjct: 277 IFTDKEGLSLIYEQLKNIINA-DRES-HTHVSVVISFCRHCGDDIAGLVPRKVKSAAEKF 334
Query: 177 YEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEE 236
F I+ ++++ F+ Y+ ++ + L+ +H L+ E +N +IL++KGELSE+
Sbjct: 335 NLSFPPSEIISPEKQQPFQNLLKEYFTSLTKHLKRDHRELQNTERQNRRILHSKGELSED 394
Query: 237 NSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTS-GEDA-SPASGKDSSV 294
YE+ SY L N SLA+ LD P +P+D T G D +P + +
Sbjct: 395 RHKQYEEFAMSYQKLLANSQSLADLLDENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDL 454
Query: 295 PEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLA 354
+W+DE+ R FYE L DL+AFVPA+L K NE S + E D E +
Sbjct: 455 EGGIWEDEDARNFYENLIDLKAFVPAILF-----KDNEKSCQNKESNKDDTKEAKE---- 505
Query: 355 AQDTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDK 414
++D EVS SP+ D E + + + D + +G D+ A+D K
Sbjct: 506 SKDNKEVS-----SPD--------DLELELENLEINDDTLELEGGDE-------AEDLTK 545
Query: 415 EKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCY-LNSKSNR 473
+ E++ E + + LK + +DA LQ+LP CV+RDLID+ ++FC +N+K+NR
Sbjct: 546 KLLDEQEQEDEEASTGSHLKLI----VDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANR 601
Query: 474 KRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIE 533
K+LVRALF VPR L+LLP+Y+R+VATL CM DV+ L ML +F F
Sbjct: 602 KKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRF----------- 650
Query: 534 TKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETS 593
CLK L DF+HH+I++AC LLETCGRFL+RSPE+
Sbjct: 651 ----------HXXXXXXXXXNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESH 700
Query: 594 IRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFS 653
+R + +LE +MR K +LD R+VT+VENAYY C PP V K RPPL +Y+RKLL+
Sbjct: 701 LRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYVRKLLYK 760
Query: 654 DLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEF 711
DL K + E VLRQ+RKLPW D E Y++ C + + KY IH +A+L AGL Y ++
Sbjct: 761 DLSKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDV 820
Query: 712 AVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
+ VVD VLE+IRLG+E+N QRR++ +FLGELYNY V+S+VIF TLY FG
Sbjct: 821 GIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFG 879
>gi|340368976|ref|XP_003383025.1| PREDICTED: regulator of nonsense transcripts 2-like [Amphimedon
queenslandica]
Length = 1306
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 244/728 (33%), Positives = 402/728 (55%), Gaps = 22/728 (3%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
+ ICSL+H RY +FS L+D LL+ + GK + ++N + K R L+L EL G
Sbjct: 122 VHICSLIHCRYDEFSDHLLD-LLQKIYSGKIEKSNSDEKNANSTKYRLGLRLTGELLIAG 180
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLG-------LPLSGP 172
+I+ +++ LT + ++ T L ++ F+R G L L+
Sbjct: 181 VIDQDIGVALLMEMLTEVVTADKKEPDHTYLPVIVGFSRHLAEDIAGFMPRKNKLLLTKY 240
Query: 173 GQEIYEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGE 232
G E + F ++ DQ+ +F+ YY+ V+ L ++H + + N +I+ +KGE
Sbjct: 241 GLESPQTRF----LSDDQQGMFRSLLLGYYDTVKRYLISQHKEMHRRARRNIQIMQSKGE 296
Query: 233 LSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDV---HTTRVTSGEDASPASG 289
LS E EK +K+Y+ L ++S+L++ LD P +PED T + +S + P+
Sbjct: 297 LSSEREEENEKAQKNYEKLVTSISTLSDVLDQDFPDLPEDTVLPETFQSSSIDLQLPSFS 356
Query: 290 KDSSVP-EPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEP 348
D+ +W+DEE R+FYE + D++ +PA+L + K +V ++ +
Sbjct: 357 SDNEFSTSSLWEDEEQRSFYEDITDIKPHIPAILFEGIDSKRKGNNVSESSDVSEGDTGE 416
Query: 349 DQGQLAAQDTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEK 408
+ + EG K ++ +E K+ E+ D+EE ++E
Sbjct: 417 GGAGGIGGEGEGEGGEGEGECEGGEEGDEKARQIILEELIKE--TEEQSSDDQEEYEEEG 474
Query: 409 -AKDPDKEKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYL 467
A D E T V+ + + D L +LP +++ +D+ VEFC +
Sbjct: 475 GATGDDGEDSVSHVTIGPVDESSGSGLSTDVSKFDELALKLPNMMNKKFVDEFAVEFCLI 534
Query: 468 NSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKK 527
NSK NR +L + LFNV + ++L+P+YSR++ T++ C+ DV +++ ML +F F + KK
Sbjct: 535 NSKINRVKLAKVLFNVDKNRMDLIPFYSRLLVTINPCLPDVPELVMDMLNRDFKFQLRKK 594
Query: 528 DQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLY 587
DQ+++ TKI+N R+I EL KF + P C+ L DFTHHN+++AC L+E CGR+L
Sbjct: 595 DQIHVYTKIKNARYIAELTKFGLFPKPEAMRCITRTLQDFTHHNVELACTLIEHCGRYLL 654
Query: 588 RSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYI 647
RS E+ +R ++EIL+R K+V +LD R ++VE+A Y PP+ SA VRPPL YI
Sbjct: 655 RSKESHLRAGAIMEILVRKKSVHHLDGRQKSMVEDALYAANPPDVSATTVIVRPPLQAYI 714
Query: 648 RKLLFSDLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLS 705
KLL+ DL+K ++E VL+Q RKLPW+D E +Y + ++ + K+ +H +A + +GL
Sbjct: 715 LKLLYKDLNKRTVEKVLKQFRKLPWNDPEVFNYAVVALSEIWRVKFSNVHCVADILSGLK 774
Query: 706 RYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYL 765
Y ++ V ++D LE+IRLGLE N M QRR+A ++FLGELY Y+ ++++V+F TLY
Sbjct: 775 IYQNKAVVWIIDATLEDIRLGLETNLPHMNQRRMAVIKFLGELYTYQLIEANVVFRTLYT 834
Query: 766 ILVFGHGT 773
+L FG+ +
Sbjct: 835 LLTFGYNS 842
>gi|395741333|ref|XP_003780756.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts 2
[Pongo abelii]
Length = 862
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 223/489 (45%), Positives = 305/489 (62%), Gaps = 36/489 (7%)
Query: 285 SPASGKDSSVPEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDP 344
+P + + +W+DE+ R FYE L DL+AFVPA+L K NE S + E D
Sbjct: 35 TPGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPAILF-----KDNEKSCQNKESNKDD 89
Query: 345 ASEPDQGQLAAQDTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEK 404
E + ++D EVS SP+ D E + + + D + +G D
Sbjct: 90 TKEAKE----SKDNKEVS-----SPD--------DLELELENLEINDDTLELEGGD---- 128
Query: 405 DKEKAKDPDKEKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEF 464
+A+D K+ E++ E + + LK + +DA LQ+LP CV+RDLID+ ++F
Sbjct: 129 ---EAEDLTKKLLDEQEQEDEEASTGSHLKLI----VDAFLQQLPNCVNRDLIDKAAMDF 181
Query: 465 CY-LNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFL 523
C +N+K+NRK+LVRALF VPR L+LLP+Y+R+VATL CM DV+ L ML +F F
Sbjct: 182 CMNMNTKANRKKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFH 241
Query: 524 INKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCG 583
+ KKDQ+NIETK + +RFIGEL KFK+ CLK L DF+HH+I++AC LLETCG
Sbjct: 242 VRKKDQINIETKNKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCG 301
Query: 584 RFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPL 643
RFL+RSPE+ +R + +LE +MR K +LD R+VT+VENAYY C PP V K RPPL
Sbjct: 302 RFLFRSPESHLRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPL 361
Query: 644 HQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLT 701
+Y+RKLL+ DL K + E VLRQ+RKLPW D E Y++ C + + KY IH +A+L
Sbjct: 362 QEYVRKLLYKDLSKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLL 421
Query: 702 AGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFD 761
AGL Y ++ + VVD VLE+IRLG+E+N QRR++ +FLGELYNY V+S+VIF
Sbjct: 422 AGLVLYQEDVGIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFR 481
Query: 762 TLYLILVFG 770
TLY FG
Sbjct: 482 TLYSFTSFG 490
>gi|345310077|ref|XP_003428922.1| PREDICTED: regulator of nonsense transcripts 2-like [Ornithorhynchus
anatinus]
Length = 1856
Score = 397 bits (1021), Expect = e-107, Method: Compositional matrix adjust.
Identities = 223/494 (45%), Positives = 304/494 (61%), Gaps = 36/494 (7%)
Query: 280 SGEDASPASGKDSSVPEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLE 339
S + SP + +W+DE+ R FYE L DL+AFVPA+L K NE S + E
Sbjct: 1027 SNQFISPPGXXXXDLEGGIWEDEDARNFYENLIDLKAFVPAILF-----KDNEKSSQSKE 1081
Query: 340 QPTDPASEPDQGQLAAQDTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGK 399
D + E + +D +VS E ++++ D E E G
Sbjct: 1082 SNKDESKESKE----CKDNKDVSCTDDLELELENLDINDDPLELE-------------GG 1124
Query: 400 DKEEKDKEKAKDPDKEKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQ 459
D +A+D K+ E++ E + + LK + +DA LQ+LP CV+RDLID+
Sbjct: 1125 D-------EAEDLTKKILDEQEQEDEEASTGSHLKLI----VDAFLQQLPNCVNRDLIDK 1173
Query: 460 LTVEFCY-LNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEE 518
++FC +N+K+NR++LVRALF VPR L+LLP+Y+R+VATL CM DV+ L ML+
Sbjct: 1174 AAMDFCMNMNTKANRRKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLKG 1233
Query: 519 EFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNL 578
+F F + KKDQ+NIETK + +RFIGEL KFK+ CLK L DF+HH+I++AC L
Sbjct: 1234 DFRFHVRKKDQINIETKNKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTL 1293
Query: 579 LETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSK 638
LETCGRFL+RSPE+ +R + +LE +MR K +LD R+VT+VENAYY C PP V K
Sbjct: 1294 LETCGRFLFRSPESHLRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKK 1353
Query: 639 VRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHL 696
RPPL +YIRKLL+ DL K + E VLRQ+RKLPW D E Y++ C + + KY IH
Sbjct: 1354 KRPPLQEYIRKLLYKDLSKVTTEKVLRQMRKLPWQDPEVKDYVICCMINIWNVKYNSIHC 1413
Query: 697 IASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDS 756
+A+L AGL Y ++ + VVD VLE+IRLG+E+N QRR++ +FLGELYNY V+S
Sbjct: 1414 VANLLAGLVLYQEDVGIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVES 1473
Query: 757 SVIFDTLYLILVFG 770
+VIF TLY FG
Sbjct: 1474 AVIFRTLYSFTSFG 1487
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 82/167 (49%), Gaps = 12/167 (7%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
+ +CSL HQRY DF+P L+ K F E ++ K R+ L+ + EL +G
Sbjct: 222 VHLCSLFHQRYADFAPSLLQVWKKHF------EARKEEKTPNITKLRTDLRFIAELTIVG 275
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGL---PLSGPGQEI 176
I D I + L +I + DR+ + T+++++ SF R G GL + G ++
Sbjct: 276 IFTDKEGLSLIYEQLKNIIN-ADRE-SHTHVSVVISFCRHCGDDIAGLVPRKVKGAAEKF 333
Query: 177 YEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENEN 223
F I+ ++++ F+ Y+ ++ + L+ +H L+ +E +N
Sbjct: 334 NLSFPPSEIISPEKQQPFQNLLKEYFTSLTKHLKRDHRELQNIERQN 380
>gi|449663470|ref|XP_002156297.2| PREDICTED: regulator of nonsense transcripts 2-like [Hydra
magnipapillata]
Length = 1239
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 265/783 (33%), Positives = 396/783 (50%), Gaps = 144/783 (18%)
Query: 63 ICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIGII 122
+CSL HQRY DF+ LKVF G D ++ K R L+LL EL G
Sbjct: 165 MCSLFHQRYADFTVLFKQNFLKVFDCIGEGCK-DEEKAAVVAKLRPALRLLGELVLDGFY 223
Query: 123 ---EDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQGRIFLGLPLSG--PGQEIY 177
E I + I++++ + + + T T++ + R G L+G P ++
Sbjct: 224 LLNEGIPILLTILQNILNADK-----ASFTCGTVVITLVRH----CGEDLAGILPRKQ-- 272
Query: 178 EEFFKGLN---ITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELS 234
F G+ ++ADQ+ +F F YY + L H L+ E +N + + +GEL
Sbjct: 273 -RFLPGIVYNVLSADQQSVFMCLFKEYYENISNHLVKLHKELQNREKQNRQTIGLRGELP 331
Query: 235 EENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPE-------DVHTTRVTSGEDASPA 287
+ S+EK +K Y+ + + +SLAE LD + P +PE DV T + +P
Sbjct: 332 ADRKESFEKAQKIYEKILSSTTSLAELLDEEMPELPECQFEEREDVGTINI-----FTPN 386
Query: 288 SGKDSSVPEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASE 347
G + +W+D++TR FYE + DL+ VP ++ E + +N + L +
Sbjct: 387 RGVEYDSETGLWEDDDTRTFYEDIKDLKILVPQIVFKEQDVPSNAQRKEKLMKDKKKKER 446
Query: 348 PDQGQLAAQDTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKD-- 405
+ L A D AE + ++ DPD D E+D
Sbjct: 447 RLRVDLLADDGAEYNDEID-----------------------DPD-------DSYEQDIL 476
Query: 406 KEKAKDPDKEKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFC 465
E A D D G+ DA +LP C++RD IDQ EF
Sbjct: 477 GEDADDEDP-----------------ATLGMAAI-ADAYFNKLPTCINRDFIDQAAEEFI 518
Query: 466 Y-LNSKSNRKRLVRALFNVPRT------------SLE----------------------- 489
LN+K NRKRLV+ LF+V RT ++E
Sbjct: 519 LKLNTKGNRKRLVKTLFSVNRTSEPHTSARLSQLAMERGLTISLRTIRRRLCYDFGLVVK 578
Query: 490 ------LLPYYSRMVATLSTC--MKDVS------------SMLIQMLEEEFNFLINKKDQ 529
L+P +++ A + C +KD + S Q+ +N+L KKDQ
Sbjct: 579 RPAKKPLIP--AQLQAKIKFCKSLKDKTQEWWVRVMFTDESTFQQIRGTGYNYL-RKKDQ 635
Query: 530 MNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRS 589
++ E+KI+ +RFIGEL KFK+ P CLK LD FTHHNID+ACNL+ETCGRFLYRS
Sbjct: 636 IHSESKIKTVRFIGELTKFKVCPKAEALYCLKVLLDKFTHHNIDMACNLIETCGRFLYRS 695
Query: 590 PETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRK 649
PE+ RM+++LE +MR K V+ D RH T++ENA+Y C PPER KVR P+H+YIRK
Sbjct: 696 PESHSRMSSLLEQMMRKKAVQAFDTRHSTMIENAFYYCNPPERQKLNKKVREPIHEYIRK 755
Query: 650 LLFSDLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRY 707
L++ DL K++ E VLRQ+RKLPW+D + +Y+ +C + K+ I +A++ +GL+ Y
Sbjct: 756 LVYKDLFKTTTEKVLRQIRKLPWNDSKIVAYVARCLTNIWNVKFNNIRCVANMLSGLAEY 815
Query: 708 HDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLIL 767
H++ A+ ++D LE IRLG+E N + QRR+ M++LGE+YNY+ VDS +IF+TLY+++
Sbjct: 816 HEDLAICIIDGTLENIRLGMETNIFRDNQRRICCMKYLGEMYNYQLVDSDIIFNTLYMLI 875
Query: 768 VFG 770
FG
Sbjct: 876 TFG 878
>gi|432118320|gb|ELK38080.1| Regulator of nonsense transcripts 2, partial [Myotis davidii]
Length = 835
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 222/489 (45%), Positives = 305/489 (62%), Gaps = 36/489 (7%)
Query: 285 SPASGKDSSVPEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDP 344
+P + + +W+DE+ R FYE L DL+AFVPA+L K NE S + E D
Sbjct: 10 TPGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPAILF-----KDNEKSCQNKEPNKDD 64
Query: 345 ASEPDQGQLAAQDTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEK 404
+ E + +D EVS +P+ D E + + + D + +G D
Sbjct: 65 SKEAKE----PKDNKEVS-----NPD--------DLELELENLEINDDTLELEGAD---- 103
Query: 405 DKEKAKDPDKEKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEF 464
+A+D K+ E++ E + + LK + +DA LQ+LP CV+R+LID+ ++F
Sbjct: 104 ---EAEDLTKKLLDEQEQEDEETSTGSHLKLI----VDAFLQQLPNCVNRELIDKAAMDF 156
Query: 465 CY-LNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFL 523
C +N+K+NRK+LVRALF VPR L+LLP+Y+R+VATL CM DV+ L ML +F F
Sbjct: 157 CMNMNTKANRKKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFH 216
Query: 524 INKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCG 583
+ KKDQ+NIETK + +RFIGEL KFK+ CLK L DF+HH+I++AC LLETCG
Sbjct: 217 VRKKDQINIETKNKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCG 276
Query: 584 RFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPL 643
RFL+RSPE+ +R + +LE +MR K +LD R+VT+VENAYY C PP V K RPPL
Sbjct: 277 RFLFRSPESHLRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPL 336
Query: 644 HQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLT 701
+YIRKLL+ DL K + E VLRQ+RKLPW D E Y++ C + + KY IH +A+L
Sbjct: 337 QEYIRKLLYKDLSKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLL 396
Query: 702 AGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFD 761
AGL Y ++ + VVD VLE+IRLG+E+N QRR++ +FLGELYNY V+S+VIF
Sbjct: 397 AGLVLYQEDVGIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFR 456
Query: 762 TLYLILVFG 770
TLY FG
Sbjct: 457 TLYSFTSFG 465
>gi|353230221|emb|CCD76392.1| hypothetical protein Smp_156450.2 [Schistosoma mansoni]
Length = 1339
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 254/732 (34%), Positives = 387/732 (52%), Gaps = 74/732 (10%)
Query: 59 YFLKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYF 118
+ LK+CS ++QRY DF D K F S +DL +N K R L L +L
Sbjct: 100 FMLKLCSAMYQRYSDFGVLFFDAWKKSF---SSHKDL---KNTNLSKLRVDLALFADLNT 153
Query: 119 IGIIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ------GRIFLGLPLSGP 172
IGI D+ I ++ ++ D D +N+ +L+SF R G I + L
Sbjct: 154 IGIFRDAD-GIRLLAGQLTLLAANDHDNF-SNIGILSSFCRHCSDDWVGVIPRRIRLLSE 211
Query: 173 GQEIYEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGE 232
E+ + + ++++++ + F+ Y A LQ +++ + N L ++GE
Sbjct: 212 KYEM--PVPRSIFMSSERQAKCRTLFNDYLAAAMHRLQNMVKETQRIISGNRDQLESRGE 269
Query: 233 LSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASGKDS 292
+SEE E L + + ++S+LA+ LD PP+ + TS A + K
Sbjct: 270 VSEERQERAEHLMSACRKFHESLSTLADLLDADPPLDFSSMIKDESTSDSIAPDSVEKVV 329
Query: 293 SVPEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPD--- 349
+++DE+TR FYE LPD++A VPA+L E+E E S + + DPA D
Sbjct: 330 HEEVNLFEDEDTRLFYESLPDIKAMVPAILYKESEQAGIE-SNQSKNEYGDPAGSEDIDI 388
Query: 350 ---QGQLAAQDT-AEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKD 405
+ +LA ++ VS D S SV D
Sbjct: 389 DTVESELAKEEALIRVSEDGNESTNCTSV-----------------------------LD 419
Query: 406 KEKAKDPDKEKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFC 465
K K + + G+E L ++ L +LP C++RDLID+ ++FC
Sbjct: 420 KSKPYLLNTDDGEED------------LNPSGKVLMETFLTQLPNCINRDLIDRAAIDFC 467
Query: 466 Y-LNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLI 524
LN ++NR+RL +ALFNVPRT +LLP+Y+R VA+L+ M D+ + ML EF + +
Sbjct: 468 LNLNKRANRRRLAKALFNVPRTRYDLLPFYARFVASLAPVMPDLVQDINSMLTAEFRWRL 527
Query: 525 NKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGR 584
+K+DQ+NIE+K++ +RFIGEL KFKI PA +CLK L F HHNID+AC LL++CGR
Sbjct: 528 SKRDQLNIESKLKVVRFIGELVKFKIYPAHQALTCLKQLLPQFVHHNIDMACALLDSCGR 587
Query: 585 FLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRP--- 641
FLYR P + R LEI++R K ++D R+ ++EN YY C PP + ++ V P
Sbjct: 588 FLYRLPISHKRTKVYLEIMLRKKVALHMDQRYSIMIENTYYYCNPPPSNRQI--VEPVKL 645
Query: 642 -PLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCESYLLKC--FMKVHKGKYGQIHLIA 698
P +IR +L + LD++++ LR +RK+ W+D E C F + +Y I+ +A
Sbjct: 646 TPQMMFIRHILLTKLDRTTVNTTLRLIRKMDWNDQELVEFTCTLFTRAWDVRYTNINCLA 705
Query: 699 SLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSV 758
S+ +GL+ YH +FA+AVVD V+E+IR+G+ELN + QRR+ +++LG LYNY VDS V
Sbjct: 706 SVLSGLATYHSDFAMAVVDNVIEDIRVGMELNLPSLNQRRIVMVKYLGLLYNYCLVDSPV 765
Query: 759 IFDTLYLILVFG 770
IF TLY +L FG
Sbjct: 766 IFKTLYSLLTFG 777
>gi|256082793|ref|XP_002577637.1| hypothetical protein [Schistosoma mansoni]
Length = 1339
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 254/732 (34%), Positives = 387/732 (52%), Gaps = 74/732 (10%)
Query: 59 YFLKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYF 118
+ LK+CS ++QRY DF D K F S +DL +N K R L L +L
Sbjct: 100 FMLKLCSAMYQRYSDFGVLFFDAWKKSF---SSHKDL---KNTNLSKLRVDLALFADLNT 153
Query: 119 IGIIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ------GRIFLGLPLSGP 172
IGI D+ I ++ ++ D D +N+ +L+SF R G I + L
Sbjct: 154 IGIFRDAD-GIRLLAGQLTLLAANDHDNF-SNIGILSSFCRHCSDDWVGVIPRRIRLLSE 211
Query: 173 GQEIYEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGE 232
E+ + + ++++++ + F+ Y A LQ +++ + N L ++GE
Sbjct: 212 KYEM--PVPRSIFMSSERQAKCRTLFNDYLAAAMHRLQNMVKETQRIISGNRDQLESRGE 269
Query: 233 LSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASGKDS 292
+SEE E L + + ++S+LA+ LD PP+ + TS A + K
Sbjct: 270 VSEERQERAEHLMSACRKFHESLSTLADLLDADPPLDFSSMIKDESTSDSIAPDSVEKVV 329
Query: 293 SVPEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPD--- 349
+++DE+TR FYE LPD++A VPA+L E+E E S + + DPA D
Sbjct: 330 HEEVNLFEDEDTRLFYESLPDIKAMVPAILYKESEQAGIE-SNQSKNEYGDPAGSEDIDI 388
Query: 350 ---QGQLAAQDT-AEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKD 405
+ +LA ++ VS D S SV D
Sbjct: 389 DTVESELAKEEALIRVSEDGNESTNCTSV-----------------------------LD 419
Query: 406 KEKAKDPDKEKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFC 465
K K + + G+E L ++ L +LP C++RDLID+ ++FC
Sbjct: 420 KSKPYLLNTDDGEED------------LNPSGKVLMETFLTQLPNCINRDLIDRAAIDFC 467
Query: 466 Y-LNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLI 524
LN ++NR+RL +ALFNVPRT +LLP+Y+R VA+L+ M D+ + ML EF + +
Sbjct: 468 LNLNKRANRRRLAKALFNVPRTRYDLLPFYARFVASLAPVMPDLVQDINSMLTAEFRWRL 527
Query: 525 NKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGR 584
+K+DQ+NIE+K++ +RFIGEL KFKI PA +CLK L F HHNID+AC LL++CGR
Sbjct: 528 SKRDQLNIESKLKVVRFIGELVKFKIYPAHQALTCLKQLLPQFVHHNIDMACALLDSCGR 587
Query: 585 FLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRP--- 641
FLYR P + R LEI++R K ++D R+ ++EN YY C PP + ++ V P
Sbjct: 588 FLYRLPISHKRTKVYLEIMLRKKVALHMDQRYSIMIENTYYYCNPPPSNRQI--VEPVKL 645
Query: 642 -PLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCESYLLKC--FMKVHKGKYGQIHLIA 698
P +IR +L + LD++++ LR +RK+ W+D E C F + +Y I+ +A
Sbjct: 646 TPQMMFIRHILLTKLDRTTVNTTLRLIRKMDWNDQELVEFTCTLFTRAWDVRYTNINCLA 705
Query: 699 SLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSV 758
S+ +GL+ YH +FA+AVVD V+E+IR+G+ELN + QRR+ +++LG LYNY VDS V
Sbjct: 706 SVLSGLATYHSDFAMAVVDNVIEDIRVGMELNLPSLNQRRIVMVKYLGLLYNYCLVDSPV 765
Query: 759 IFDTLYLILVFG 770
IF TLY +L FG
Sbjct: 766 IFKTLYSLLTFG 777
>gi|224092772|ref|XP_002191559.1| PREDICTED: regulator of nonsense transcripts 2 [Taeniopygia
guttata]
Length = 1271
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/333 (54%), Positives = 238/333 (71%), Gaps = 3/333 (0%)
Query: 441 LDALLQRLPGCVSRDLIDQLTVEFCY-LNSKSNRKRLVRALFNVPRTSLELLPYYSRMVA 499
+DA LQ+LP CV+RDLID+ ++FC +N+K+NR++LVRALF VPR L+LLP+Y+R+VA
Sbjct: 567 VDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANRRKLVRALFIVPRQRLDLLPFYARLVA 626
Query: 500 TLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSC 559
TL CM DV+ L ML+ +F F + KKDQ+NIETK + +RFIGEL KFK+ C
Sbjct: 627 TLHPCMSDVAEDLCSMLKGDFRFHVRKKDQINIETKNKTVRFIGELTKFKMFSKNDTLHC 686
Query: 560 LKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTL 619
LK L DF+HH+I++AC LLETCGRFL+RSPE+ +R + +LE +MR K +LD R+VT+
Sbjct: 687 LKMLLSDFSHHHIEMACTLLETCGRFLFRSPESHLRTSVLLEQMMRKKQAMHLDARYVTM 746
Query: 620 VENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE--S 677
VENAYY C PP V K RPPL +YIRKLL+ DL K + E VLRQ+RKLPW D E
Sbjct: 747 VENAYYYCNPPPAEKTVKKKRPPLQEYIRKLLYKDLSKVTTEKVLRQMRKLPWQDAEVKD 806
Query: 678 YLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQR 737
Y++ C + + KY IH +A+L AGL Y ++ + VVD VLE+IRLG+E+N QR
Sbjct: 807 YVICCMINIWNVKYNSIHCVANLLAGLVLYQEDVGIHVVDGVLEDIRLGMEVNQPKFNQR 866
Query: 738 RLAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
R++ +FLGELYNY V+S+VIF TLY FG
Sbjct: 867 RISSAKFLGELYNYRMVESAVIFRTLYSFTSFG 899
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 142/282 (50%), Gaps = 32/282 (11%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
+ +CSL HQRY DF+P L+ K F E ++ K R+ L+ + EL +G
Sbjct: 222 VHLCSLFHQRYADFAPSLLQAWKKHF------EARKEEKTPNITKLRTDLRFIAELTIVG 275
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGL------------ 167
I D I + L +I + DR++ T+++++ SF R G GL
Sbjct: 276 IFTDKEGLSLIYEQLKNIIN-ADRES-HTHVSVVISFCRHCGDDIAGLVPRKVKTVAEKF 333
Query: 168 PLSGPGQEIYEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKIL 227
LS P EI I+ ++++ F+ Y+ ++ + L+ +H L+ +E +N +IL
Sbjct: 334 NLSFPPSEI---------ISPEKQQPFQNLLKEYFTSLTKHLKRDHRELQNIERQNRRIL 384
Query: 228 NAKGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTS-GEDA-S 285
++KGELSE+ YE+ SY L N SLA+ LD P +P++ T G D +
Sbjct: 385 HSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLLDENMPDLPQEKPTPEEHGPGIDIFT 444
Query: 286 PASGKDSSVPEPVWDDEETRAFYECLPDLRAFVPAVLLGEAE 327
P + + +W+DE+ R FYE L DL+AFVPA+L + E
Sbjct: 445 PGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPAILFKDNE 486
>gi|449272036|gb|EMC82156.1| Regulator of nonsense transcripts 2 [Columba livia]
Length = 1269
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/333 (54%), Positives = 238/333 (71%), Gaps = 3/333 (0%)
Query: 441 LDALLQRLPGCVSRDLIDQLTVEFCY-LNSKSNRKRLVRALFNVPRTSLELLPYYSRMVA 499
+DA LQ+LP CV+RDLID+ ++FC +N+K+NR++LVRALF VPR L+LLP+Y+R+VA
Sbjct: 567 VDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANRRKLVRALFIVPRQRLDLLPFYARLVA 626
Query: 500 TLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSC 559
TL CM DV+ L ML+ +F F + KKDQ+NIETK + +RFIGEL KFK+ C
Sbjct: 627 TLHPCMSDVAEDLCSMLKGDFRFHVRKKDQINIETKNKTVRFIGELTKFKMFSKNDTLHC 686
Query: 560 LKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTL 619
LK L DF+HH+I++AC LLETCGRFL+RSPE+ +R + +LE +MR K +LD R+VT+
Sbjct: 687 LKMLLSDFSHHHIEMACTLLETCGRFLFRSPESHLRTSVLLEQMMRKKQAMHLDARYVTM 746
Query: 620 VENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE--S 677
VENAYY C PP V K RPPL +YIRKLL+ DL K + E VLRQ+RKLPW D E
Sbjct: 747 VENAYYYCNPPPAEKTVKKKRPPLQEYIRKLLYKDLSKVTTEKVLRQMRKLPWQDAEVKD 806
Query: 678 YLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQR 737
Y++ C + + KY IH +A+L AGL Y ++ + VVD VLE+IRLG+E+N QR
Sbjct: 807 YVICCMINIWNVKYNSIHCVANLLAGLVLYQEDVGIHVVDGVLEDIRLGMEVNQPKFNQR 866
Query: 738 RLAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
R++ +FLGELYNY V+S+VIF TLY FG
Sbjct: 867 RISSAKFLGELYNYRMVESAVIFRTLYSFTSFG 899
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 142/282 (50%), Gaps = 32/282 (11%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
+ +CSL HQRY DF+P L+ K F E ++ K R+ L+ + EL +G
Sbjct: 222 VHLCSLFHQRYADFAPLLLQAWKKHF------EARKEEKTPNITKLRTDLRFIAELTIVG 275
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGL------------ 167
I D I + L +I + DR++ T+++++ SF R G GL
Sbjct: 276 IFTDKEGLSLIYEQLKNIIN-ADRES-HTHVSVVISFCRHCGDDIAGLVPRRVKTVAEKF 333
Query: 168 PLSGPGQEIYEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKIL 227
LS P EI I+ ++++ F+ Y+ ++ + L+ +H L+ +E +N +IL
Sbjct: 334 NLSFPPSEI---------ISPEKQQPFQNLLKEYFTSLTKHLKRDHRELQNIERQNRRIL 384
Query: 228 NAKGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTS-GEDA-S 285
++KGELSE+ YE+ SY L N SLA+ LD P +P++ T G D +
Sbjct: 385 HSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLLDENMPDLPQEKPTPEEHGPGIDIFT 444
Query: 286 PASGKDSSVPEPVWDDEETRAFYECLPDLRAFVPAVLLGEAE 327
P + + +W+DE+ R FYE L DL+AFVPA+L + E
Sbjct: 445 PGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPAILFKDNE 486
>gi|431917655|gb|ELK16920.1| Regulator of nonsense transcripts 2 [Pteropus alecto]
Length = 1369
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/333 (54%), Positives = 237/333 (71%), Gaps = 3/333 (0%)
Query: 441 LDALLQRLPGCVSRDLIDQLTVEFCY-LNSKSNRKRLVRALFNVPRTSLELLPYYSRMVA 499
+DA LQ+LP CV+RDLID+ ++FC +N+K+NRK+LVRALF VPR L+LLP+Y+R+VA
Sbjct: 657 VDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANRKKLVRALFIVPRQRLDLLPFYARLVA 716
Query: 500 TLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSC 559
TL CM DV+ L ML +F F + KKDQ+NIETK + +RFIGEL KFK+ C
Sbjct: 717 TLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINIETKNKTVRFIGELTKFKMFTKNDTLHC 776
Query: 560 LKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTL 619
LK L DF+HH+I++AC LLETCGRFL+RSPE+ +R + +LE +MR K +LD R+VT+
Sbjct: 777 LKMLLSDFSHHHIEMACTLLETCGRFLFRSPESHLRTSVLLEQMMRKKQAMHLDARYVTM 836
Query: 620 VENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE--S 677
VENAYY C PP V K RPPL +Y+RKLL+ DL K + E VLRQ+RKLPW D E
Sbjct: 837 VENAYYYCNPPPAEKTVKKKRPPLQEYVRKLLYKDLSKVTTEKVLRQMRKLPWQDQEVKD 896
Query: 678 YLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQR 737
Y++ C + + KY IH +A+L AGL Y ++ + VVD VLE+IRLG+E+N QR
Sbjct: 897 YVICCMINIWNVKYNSIHCVANLLAGLVLYQEDVGIHVVDGVLEDIRLGMEVNQPKFNQR 956
Query: 738 RLAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
R++ +FLGELYNY V+S+VIF TLY FG
Sbjct: 957 RISSAKFLGELYNYRMVESAVIFRTLYSFTSFG 989
>gi|240248223|emb|CAX18771.1| UPF2 regulator of nonsense transcripts homolog (yeast) [Danio
rerio]
Length = 1011
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/339 (53%), Positives = 242/339 (71%), Gaps = 3/339 (0%)
Query: 441 LDALLQRLPGCVSRDLIDQLTVEFCY-LNSKSNRKRLVRALFNVPRTSLELLPYYSRMVA 499
+DA +Q+LP C++RDLID+ ++FC +N+KSNR++LVRALF VPR L+LLP+Y+R+VA
Sbjct: 554 VDAFIQQLPNCINRDLIDKAAMDFCMNMNTKSNRRKLVRALFTVPRQRLDLLPFYARLVA 613
Query: 500 TLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSC 559
TL CM DV+ L ML+ +F F I KKDQ+NIETK + +RFIGEL KFK+ C
Sbjct: 614 TLHPCMSDVAEDLCSMLKGDFRFHIRKKDQINIETKNKTVRFIGELAKFKMFSKTDTLHC 673
Query: 560 LKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTL 619
LK L DF+HH+I++AC LLETCGRFL+RSP++ +R + +LE +MR K ++LD R+VT+
Sbjct: 674 LKMLLSDFSHHHIEMACTLLETCGRFLFRSPDSHLRTSVLLEQMMRKKQAQHLDVRYVTM 733
Query: 620 VENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE--S 677
VENAYY C PP V + RPPL +YIRKLL+ DL K + E VLRQ+RKLPW D E
Sbjct: 734 VENAYYYCNPPPMEKTVRRKRPPLQEYIRKLLYKDLSKVTTEKVLRQMRKLPWHDSEVKG 793
Query: 678 YLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQR 737
YL+ C + + KY IH +A+L AGL Y ++ + VVD VLE+IRLG+E+N QR
Sbjct: 794 YLICCMVNIWNVKYNSIHCVANLLAGLVAYQEDVGIHVVDGVLEDIRLGMEVNQPKFNQR 853
Query: 738 RLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHGTAET 776
R++ +FLGELYNY V+S+VIF +L+ + FG T T
Sbjct: 854 RISSAKFLGELYNYRMVESAVIFRSLFSFISFGVNTDGT 892
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 134/268 (50%), Gaps = 13/268 (4%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
+ +CSL HQRY +F+P L+ + F E ++ K R+ L+ + EL +G
Sbjct: 221 VHLCSLFHQRYAEFAPLLLAAWKRHF------EARKEEKTPNVSKLRTDLRFIAELTIVG 274
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGL---PLSGPGQEI 176
+ D I + L +I DR+T T+++++ SF + G GL + ++
Sbjct: 275 LFTDKEGLSLIYEQLKNI-IAADRET-HTHVSVIISFCKHCGDDIAGLVPRKVKNAAEKY 332
Query: 177 YEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEE 236
F I A++++ F+ Y+ ++ + L+ +H L+ +E +N +IL++KGELSE+
Sbjct: 333 SLSFPPSQIINAEKQQPFQNLLREYFTSLTKHLKKDHRELQNIERQNRRILHSKGELSED 392
Query: 237 NSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDA-SPASGKDSSVP 295
YE+ Y L N +LA+ LD P P + G D +P + +
Sbjct: 393 RHKQYEEFATQYQKLLANTQTLADLLDENMPNCPRTKPYRKHGPGIDIFTPGKPGEYDLE 452
Query: 296 EPVWDDEETRAFYECLPDLRAFVPAVLL 323
+W+DE+ R FYE + DL+AFVPA+L
Sbjct: 453 GGIWEDEDARNFYENMVDLKAFVPAILF 480
>gi|426197597|gb|EKV47524.1| hypothetical protein AGABI2DRAFT_118092 [Agaricus bisporus var.
bisporus H97]
Length = 1155
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 258/755 (34%), Positives = 395/755 (52%), Gaps = 78/755 (10%)
Query: 61 LKICSLLHQRY-KDFSPCLIDGLL-------KVFFPGKSGEDLDADRNLKAMKKRSTLKL 112
++I SLLH+R+ K+F+ LI L + G + E + + + +++R L++
Sbjct: 89 VEIISLLHRRFSKEFTSVLISLLSTAIGAPSRASLSGLTAEQKEKEDGARVLRQRPVLRI 148
Query: 113 LLELYFIGIIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGL--PL 169
EL +G+I D + +I+ L D + ++L LL +F + R FLG+ P
Sbjct: 149 CSELALVGVIRDGPEKSGGEWIMKAIKELLSNDPSLSSLPLLITFLKSYSRPFLGIVPPA 208
Query: 170 SGPGQEIYEE--FFKGLNITA--------------------DQKKIFKKAFHTYYNAVQE 207
+ + E TA D + FK+ YY+ V +
Sbjct: 209 TLKQNPVAAEPGSLSAAQSTASDDALHFPPILNEEEELVELDIRDRFKRMCEGYYDNVCK 268
Query: 208 LLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPP 267
L EH L++ + N + GE+ E+ +YEK+ K Y+ L N SL+E L + P
Sbjct: 269 KLVMEHKRLQEQDKRNHEAYIRSGEIFEDRQQAYEKMTKGYEKLLANCQSLSELLYLPLP 328
Query: 268 VMPEDVH---TTRVTSGEDASPASGKDSSVPEPVWDDEETRAFYECLPDLRAFVPAVLLG 324
+P H + ++ S + +D++V W+DEE R FYE +PDL+ +VP+ +LG
Sbjct: 329 NLPRASHKSESIQIGSTHGSMFNDSEDTTVVGGKWEDEEERRFYEDVPDLKDYVPSSVLG 388
Query: 325 -EAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTAEVSADLGA---SPEGKSVEKGKDK 380
+ ++ + S K EQ E + +L ++ ++ +D + +P G S+
Sbjct: 389 IDNSNEVADDSDKDKEQQR-IQQEKEDFRLLEEELQKLQSDQSSEISTPAGDSIAA---- 443
Query: 381 EEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEKDTERKVETEKEKLKGVEGTN 440
E+D+ + P K + +L
Sbjct: 444 ----------------------EEDEARTPVPGSAKASPPLSPHLTPQGPSQL------- 474
Query: 441 LDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVAT 500
L ALL RL +R LIDQ ++F +LNSK+ RKRLV+AL VP+ ++LLP+YSR+VAT
Sbjct: 475 LTALLVRLQDATNRALIDQAAIDFAFLNSKAARKRLVKALSQVPKNRVDLLPHYSRLVAT 534
Query: 501 LSTCMKDVSSMLIQMLEEEFNFLINKKDQMN--IETKIRNIRFIGELCKFKIAPAGLVFS 558
L+ M DV S L+ +LE+EF +L KK+ + E ++RNI F L KF++ P ++
Sbjct: 535 LNKYMPDVGSDLLSLLEDEFRYLQKKKNVVKELGELRMRNITFFSHLTKFRVVPPHVILH 594
Query: 559 CLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVT 618
K CLDDFT NID LLE CGRFL RS ET+ R MLE++ R +++++ D R +
Sbjct: 595 VFKVCLDDFTGTNIDNIAMLLEGCGRFLLRSEETTERFGTMLELMRRKQSLQHFDQRQIL 654
Query: 619 LVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCESY 678
L+ENAYY C PPER+ + K R + +IR L++ L K +I+ VL+ +RKL W + E
Sbjct: 655 LLENAYYQCNPPERAPKQEKHRSSIELFIRHLVYDVLAKRTIDKVLKLIRKLDWDNEEVK 714
Query: 679 LL--KCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQ 736
L+ K F K K KY I L+A LT L RY F+++VVD++LE+IR GLE N Y Q
Sbjct: 715 LVLHKVFTKPWKIKYSSISLLAMLTYDLQRYRPAFSISVVDQILEDIRRGLEQNVYSANQ 774
Query: 737 RRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
+R+A ++FLGELYNY SS+IFDTL+LI+ FGH
Sbjct: 775 KRIATIKFLGELYNYRMFSSSIIFDTLWLIVTFGH 809
>gi|348672007|gb|EGZ11827.1| hypothetical protein PHYSODRAFT_547735 [Phytophthora sojae]
Length = 1171
Score = 374 bits (961), Expect = e-100, Method: Compositional matrix adjust.
Identities = 263/753 (34%), Positives = 390/753 (51%), Gaps = 91/753 (12%)
Query: 57 LVYFLKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLEL 116
L +K+ SLLHQRY++F+P + L+ F + +D K +++R L+LL EL
Sbjct: 107 LAAAVKVASLLHQRYEEFAPGMERALIGSFEASYASDD-----KSKMLRRRLILRLLCEL 161
Query: 117 YFIGIIEDSSIFINIIKDLTSIEH----------------LKDRDTTQTNLTLLASFARQ 160
Y G+++D + +II+ + E + Q + LL SFA+
Sbjct: 162 YLAGVLDDVQVIAHIIQRVARREQPGAGKRGSKGNMSMGSSSSSGSQQLEVPLLVSFAKS 221
Query: 161 -GRIFLGLPLSGPGQEIYEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQ---AEHTSL 216
G FLG P+ K + ++ Y A + + + A+H +
Sbjct: 222 VGVDFLGAPVV-------------------PKAVQQQCLACYLEAYEMICKFYLAQHATF 262
Query: 217 RQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTT 276
+++ N K +GE++EE+ + + ++ L +V+SLA+ALD + P +P
Sbjct: 263 LKLDTRNEKEEVNRGEVTEEHVQELKNAKLLFEKLQTSVNSLADALDREVPPLP------ 316
Query: 277 RVTSGEDASPASG-----------KDSSVPEPVWDDEETRAFYECLPDLRAFVPAVLLGE 325
V +D S G ++ S P +DDE TR+FYE LPDL VPAV+LG
Sbjct: 317 -VEEKDDGSGRGGILVWEGGEGGGRELSRDGP-FDDEATRSFYEDLPDLLELVPAVVLGL 374
Query: 326 AEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTAEVSADLGASPEGKSVEKGKDKEEKEK 385
E E K + + A+ + G + ++E + K+
Sbjct: 375 TEADVAELKKKKEATANADEEAEAEIEDEAEGNVDDDGKDGGDADDVTLEDIEADAAKDS 434
Query: 386 EKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEKDTERKVETEKEKLKGVEGTN----L 441
A D D+E+GKGK+ DTE + + L
Sbjct: 435 -TATDTDEEEGKGKE--------------------DTEDASASASTTSSSAATNSYHHQL 473
Query: 442 DALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATL 501
DA L V+RD D+ VEFCY NSK+ R RLV+ L+ VPRT LELL +Y+R+VATL
Sbjct: 474 DAFFTSLEDLVNRDRCDKAAVEFCYRNSKATRNRLVKTLYAVPRTHLELLSHYARLVATL 533
Query: 502 STCMK-DVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCL 560
+ +K D+ L+ ML EF+ LI +++Q +E+KI+NIRF+ EL KF+I P F CL
Sbjct: 534 QSVLKEDIGGELVGMLVGEFHGLIKRRNQFRLESKIKNIRFLAELVKFRICPPNTGFRCL 593
Query: 561 KACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLV 620
+ C DF HN+ VA LE CGRFLY S T +R N L ++M+LK K+LDP+ TLV
Sbjct: 594 QKCFQDFQGHNVHVATTFLENCGRFLYCSKHTHVRTVNCLNVMMKLKAAKHLDPQLETLV 653
Query: 621 ENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCES--Y 678
ENAYY+CKPPER R K P++ ++ K+L+ DL+ S++ ++ LR+LPW + +
Sbjct: 654 ENAYYMCKPPERVERQVKQYDPMYLFLIKVLYQDLNGSNVNKAVKTLRRLPWQESSTCAM 713
Query: 679 LLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRR 738
+LK +KV KGK Q+ I + GLSRYHDE V +VD+VLE IR GLE+NDY QR
Sbjct: 714 VLKALLKVTKGKVMQMKWICEVVKGLSRYHDEVLVLLVDDVLEHIRYGLEVNDYRDHQRS 773
Query: 739 LAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
L +++ LGELYN V +V+ +TLYL++ H
Sbjct: 774 LGYVKLLGELYNCGLVSMNVVVETLYLLINHSH 806
>gi|325182758|emb|CCA17213.1| regulator of nonsense transcripts 2 putative [Albugo laibachii
Nc14]
gi|325189164|emb|CCA23688.1| regulator of nonsense transcripts 2 putative [Albugo laibachii
Nc14]
Length = 1320
Score = 371 bits (952), Expect = e-99, Method: Compositional matrix adjust.
Identities = 250/780 (32%), Positives = 395/780 (50%), Gaps = 114/780 (14%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNL----KAMKKRSTLKLLLEL 116
+ + SLLHQRY++F+ L++ + V LDA N+ K +K+R L+LL E+
Sbjct: 107 IGLISLLHQRYQEFTSLLLETIFNV---------LDASHNVEDKQKMIKRRILLRLLAEM 157
Query: 117 YFIGIIEDSSIFINIIKDLTSIE-------------HLKDRDTT---------------- 147
Y + + +D SI ++I++ + H T
Sbjct: 158 YLVNVYDDVSIILSILQRAIRRDNYNHSSGNGSGSLHFSSSATAKSRRNISSSSSNSANT 217
Query: 148 --QTNLTLLASFARQGRIFLGLPLSGPGQEIYEEFFKGLN----------ITADQKKIFK 195
Q + LL SFA+ F GL G +++ N I A Q+ +
Sbjct: 218 STQFEIPLLVSFAK----FCGLEFFGVVPRKFKDTLSRSNTSQDPKWMQLIQAQQQLVPD 273
Query: 196 KA-------FHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSY 248
KA F ++ + + + +H ++ +++N N K GE++E+++ EK + +
Sbjct: 274 KAQSEALLFFMQAFDTISKYYENQHLAVCKLQNRNDKEELNCGEVNEKHAEELEKAKSLF 333
Query: 249 DHLYRNVSSLAEALDMQPPVMPEDVHTTR-------VTSGEDASPASGKDSSVPEPVWDD 301
+ + +++ LAEALD P +P+ + V G + A + P + D
Sbjct: 334 EKVQTSLNLLAEALDRDMPDLPKPENEGDKSEAGLLVYDGTEHRSADSDQAHKDSP-FSD 392
Query: 302 EETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTAEV 361
E+TR+ YE LP+L VPAV+LG E + + K EQ D Q + D E
Sbjct: 393 EDTRSLYEDLPNLLDLVPAVVLGLTEQEVMDMRKKQDEQ--------DGTQDSTNDPTEE 444
Query: 362 SADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEKD 421
++ + + S E+ D E ++ E KD E+ E +
Sbjct: 445 ELEVEETHDEDSAEEFLDLESEDLEVDKDEAVER-----------------------EGN 481
Query: 422 TERKVETEKEKLKGVEGTNL-----DALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRL 476
V E+ L + D L V+R+ D+ EFCY+NSKSNR RL
Sbjct: 482 VLAAVAKEENILPTSSSNTMYHHQADTFFSGLEFIVNRERCDKAAAEFCYINSKSNRNRL 541
Query: 477 VRALFNVPRTSLELLPYYSRMVATLSTCMKD-VSSMLIQMLEEEFNFLINKKDQMNIETK 535
++ +FNVPRT LELL YY+R++ATL+ +KD + L+++L EFN+ I K++Q +E++
Sbjct: 542 IKHVFNVPRTHLELLVYYARLIATLNRVLKDDLGHELMELLVSEFNYFIKKRNQFRLESR 601
Query: 536 IRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIR 595
I+NIRF+ EL KF++ PA F CLK C DF NI VA LLE CGRFLY T +R
Sbjct: 602 IKNIRFLAELVKFRLCPASAAFRCLKRCFSDFQGQNIYVATTLLENCGRFLYCCRLTHVR 661
Query: 596 MANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDL 655
+ L I+M+LK+ K+LD + TL++NA+YLC+PP + RV K PL+ +I+K+L+ DL
Sbjct: 662 TVHFLSIMMKLKSAKHLDAQAETLIQNAFYLCQPPLQKERVVKRYDPLYLFIQKILYQDL 721
Query: 656 DKSSIEHVLRQLRKLPW----SDCESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEF 711
D ++++ V++ LRKLPW +Y+LK +KV GK + L+ + LS+Y+
Sbjct: 722 DDNNLKRVIKLLRKLPWVSKPEQTRNYVLKAILKVTSGKVMHMRLVVDVLKELSKYYPYL 781
Query: 712 AVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
++ ++D+VLE I L++NDY Q+ L +++ LGELYN V +I DTLYLI+ H
Sbjct: 782 SIWIIDDVLEAIHQALDVNDYRRHQKTLGYIKLLGELYNRGFVGIKIIMDTLYLIIHHSH 841
>gi|291233414|ref|XP_002736648.1| PREDICTED: regulator of nonsense transcripts, putative-like
[Saccoglossus kowalevskii]
Length = 1302
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 177/338 (52%), Positives = 241/338 (71%), Gaps = 7/338 (2%)
Query: 440 NLDAL----LQRLPGCVSRDLIDQLTVEFCY-LNSKSNRKRLVRALFNVPRTSLELLPYY 494
N+ L LQ+LP CV+R+ IDQ VEFC LN+KSNRK+LV+ LF VPRT L+LLP+Y
Sbjct: 556 NMKILLEAFLQKLPTCVNREFIDQAAVEFCMNLNTKSNRKKLVKTLFLVPRTRLDLLPFY 615
Query: 495 SRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAG 554
+R+VATL CM D++ L+ + +F + + KKDQ+N+E+KI+ +RFIGEL KFK+ P
Sbjct: 616 ARLVATLYPCMGDIARDLVDKFKGDFRWHVRKKDQINLESKIKTVRFIGELTKFKMFPKT 675
Query: 555 LVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDP 614
CLK L DF+HHNI++ACNLLETCGRFLYRSP++ +R +LE +MR K+ +L+
Sbjct: 676 DTLLCLKMLLHDFSHHNIEMACNLLETCGRFLYRSPDSHLRTNALLEQMMRKKSKLHLNE 735
Query: 615 RHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSD 674
R T+VENA++ C PPE VRPP+H+YIRKLL+ DL K ++E VLRQ+RKLPW +
Sbjct: 736 RQNTMVENAFFYCNPPEVKQEEKVVRPPMHEYIRKLLYKDLTKLNVEKVLRQIRKLPWDN 795
Query: 675 CE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDY 732
E +Y+ KC + K+ IH +ASL AGL YH+E + VVD VLE+IR+G+E+N
Sbjct: 796 KEIINYVTKCMTCIWNVKFNNIHCVASLLAGLVPYHEEIGIQVVDGVLEDIRIGMEINHP 855
Query: 733 GMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
QRR++ +++LGELYNY V+S+VIF LY + FG
Sbjct: 856 KYNQRRVSIVKYLGELYNYRMVESAVIFKELYTFITFG 893
Score = 43.1 bits (100), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
+ I SLLHQRY ++SP L+ K K E + + R TL+LL EL G
Sbjct: 338 VHISSLLHQRYAEYSPQLLQAFQKTL--QKKDEKV-----TDPARMRITLRLLAELVVHG 390
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ 160
+ D + +++I ++ D++ T +N++L+ SFAR
Sbjct: 391 LFTDKEGLPLLANQISAIVNV-DKE-THSNISLILSFARH 428
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 24/30 (80%)
Query: 298 VWDDEETRAFYECLPDLRAFVPAVLLGEAE 327
+W+DE+ ++FYE L DL+AFVP +L ++E
Sbjct: 458 LWEDEDAKSFYENLVDLKAFVPGILFKDSE 487
>gi|384499236|gb|EIE89727.1| hypothetical protein RO3G_14438 [Rhizopus delemar RA 99-880]
Length = 1063
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 173/340 (50%), Positives = 234/340 (68%), Gaps = 2/340 (0%)
Query: 434 KGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPY 493
K + L+ + RLP C +RDLID V+FCY+N+K+ R +LV+AL V R L+LLPY
Sbjct: 398 KPTQNAQLEGFIARLPNCANRDLIDAAAVDFCYMNNKNARNKLVKALLKVQRQRLDLLPY 457
Query: 494 YSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPA 553
Y+R +ATL+ D+ +I L EF L +K+Q IE++++NIRF+ EL KFK+ PA
Sbjct: 458 YARFIATLNVYFSDIGETIIAALTYEFKGLQRRKNQDLIESRVKNIRFLSELAKFKVTPA 517
Query: 554 GLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLD 613
+F K LDDFT HNID+ CNLLE CGRF +SPETS RM+ MLE +MR KNV++LD
Sbjct: 518 HTIFYAFKVALDDFTSHNIDIVCNLLECCGRFFLKSPETSARMSGMLETVMRKKNVQHLD 577
Query: 614 PRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWS 673
R+ +VENAYY PP++ A K R P+ YIRKL+ DL K ++ VL+QLRKL W
Sbjct: 578 SRYSLMVENAYYQANPPDKPAIQIKERSPMELYIRKLIHEDLCKKYLDKVLKQLRKLHWE 637
Query: 674 D--CESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELND 731
D +L+K F K+ K K+G IHL+A L +GL+RYH +F V +VD ++EEIR+GLE N
Sbjct: 638 DEKIRQFLVKTFQKIWKIKFGNIHLMAILASGLNRYHSDFGVQIVDGIVEEIRMGLEQNI 697
Query: 732 YGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
+ QRR+A +++LGELYNY ++S +IFDTLY I+ FGH
Sbjct: 698 FKHNQRRIAVVKYLGELYNYRMIESPLIFDTLYTIVTFGH 737
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 137/329 (41%), Gaps = 93/329 (28%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLL--------KVFFPGKSGEDLDADRNLKAMKKRSTLKL 112
+++ S LHQR+ D L+ G L K + S E + + + + K+R+ L++
Sbjct: 46 VEVVSALHQRFPDNFTLLLSGQLSKNLQPPNKQYLATLSAEQKEKEESARITKQRTYLRI 105
Query: 113 LLELYFIGIIED--------SSIFINII-------------------------KDLTSIE 139
EL+ +G++ SSI N + + E
Sbjct: 106 ACELWLVGVLRSVTDGAAALSSITTNGVEAHRDGVAGFVNTTTSTGNSSTTKDQQKKKDE 165
Query: 140 H------LKD---RDTTQ-TNLTLLASFARQ-GRIFLGLPLSGPGQEIYEEFFKGLNITA 188
H LKD D Q NL L+ASF + G+ +G+ + + E+ + + +
Sbjct: 166 HGFVYSVLKDLLANDMEQFINLPLVASFLKNYGQTIMGI-VPRKQKAAAEQHAESIALEI 224
Query: 189 DQKKIFKKAFH--------TYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSS 240
D + + H YY +V + H ++++ME N + L A+GELSEEN
Sbjct: 225 DPESVVSPDIHGLLTSLMQNYYKSVSRHMVKLHKAVKKMERHNNETLFARGELSEEN--- 281
Query: 241 YEKLRKSYDHLYRNVSSLAEALDMQPPVMPED----VHTTRVTSGEDASPASGKDSSV-- 294
LDM P +PED ++ V++ +A GK+SS
Sbjct: 282 ---------------------LDM--PDLPEDEAANKQSSMVSNSGNAFQQDGKESSNVG 318
Query: 295 PEPVWDDEETRAFYECLPDLRAFVPAVLL 323
+ +W+DE+ R FYE LPDLR VP V L
Sbjct: 319 SQGMWEDEDARKFYEDLPDLRILVPDVFL 347
>gi|242810481|ref|XP_002485590.1| nonsense-mediated mRNA decay factor (Upf2), putative [Talaromyces
stipitatus ATCC 10500]
gi|218716215|gb|EED15637.1| nonsense-mediated mRNA decay factor (Upf2), putative [Talaromyces
stipitatus ATCC 10500]
Length = 1147
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 216/586 (36%), Positives = 314/586 (53%), Gaps = 74/586 (12%)
Query: 194 FKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYR 253
FK Y V+ + + +L NA+ GE+ E+ +++EK K+++ L
Sbjct: 295 FKNILTRYLEDVKAHVVRDQKALSAQSRRNAEAYVKSGEIFEDRQANFEKQTKAHERLVA 354
Query: 254 NVSSLAEALDMQ-PPVMPEDVHTTRVTSG----EDASPASGKDSSVPEPVWDDEETRAFY 308
N ++ E L ++ P ++ ++ ++ G + A G+ +W+DE+ R FY
Sbjct: 355 NTQAMCEILGVEMPSLVDKEAADASISGGIGLVKTAEYLRGQGDGTG--IWEDEDERRFY 412
Query: 309 ECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTAEVSADLGAS 368
E L DL+ VPAVLL + + K
Sbjct: 413 ENLADLKGKVPAVLLEDGKKK--------------------------------------- 433
Query: 369 PEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEKDTERKVET 428
+G + E+ K +E EK D D PD + E D E
Sbjct: 434 -KGDTDEQAKGQETTEK---TDTD----------------VSGPDAKPATEADNESVAVV 473
Query: 429 EKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSL 488
K G +DALL +LP ++D +DQL ++FC+LNSK++R RL++AL ++P+
Sbjct: 474 NK-----TVGAQVDALLVKLPDLQTKDQVDQLALDFCFLNSKASRNRLIKALQDIPKGRT 528
Query: 489 ELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNI-ETKIRNIRFIGELCK 547
+LLP YSR+VATL M DV LI L+EEF L +K + + ++ NIR++ EL K
Sbjct: 529 DLLPLYSRLVATLGQHMPDVPQGLITYLDEEFRSLQRRKQKEFLGHVRMINIRYLAELTK 588
Query: 548 FKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLK 607
F + P ++F CLK C+DDF+ NI++ NLLE CGR+L R+PETS RM++ LE + R K
Sbjct: 589 FGVVPEHVIFHCLKVCMDDFSRTNIEIMGNLLENCGRYLLRNPETSPRMSSFLETVGRKK 648
Query: 608 NVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQL 667
+L + L+ENA Y PPER A K R P+ YIRKLL+ D++K + +L+ L
Sbjct: 649 AATHLGQQERMLIENAMYYVDPPERPAIQQKERTPMELYIRKLLYLDMNKRNYTKILKSL 708
Query: 668 RKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRL 725
RKL W + E L + F + HK KYG IHL+A L + L RYH EF + VVD VLE I L
Sbjct: 709 RKLHWEESEVVDILERVFSRPHKVKYGNIHLLAILASALYRYHQEFVIGVVDNVLESITL 768
Query: 726 GLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
GLELND+ Q+R+A +++LGELYNY+ +DS VIFD LY I+ FGH
Sbjct: 769 GLELNDFKFNQKRVAEVKYLGELYNYKMIDSPVIFDALYRIVAFGH 814
>gi|212536999|ref|XP_002148655.1| nonsense-mediated mRNA decay factor (Upf2), putative [Talaromyces
marneffei ATCC 18224]
gi|210068397|gb|EEA22488.1| nonsense-mediated mRNA decay factor (Upf2), putative [Talaromyces
marneffei ATCC 18224]
Length = 1129
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 217/586 (37%), Positives = 316/586 (53%), Gaps = 75/586 (12%)
Query: 194 FKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYR 253
FK Y V+ + + +L NA+ GE+ E+ +++EK K+++ L
Sbjct: 278 FKNILTRYLEDVKAHVVRDQKALTAQSRRNAEAYVKSGEIFEDRQANFEKQSKAHEKLVA 337
Query: 254 NVSSLAEALDMQ-PPVMPEDVHTTRVTSG----EDASPASGKDSSVPEPVWDDEETRAFY 308
N ++ E L ++ P ++ E+ T G + A G+ +W+DEE R FY
Sbjct: 338 NTQAMCEILGVEMPSLVDEEAADASTTGGIGLVKTAEYLRGQGDGAG--IWEDEEERRFY 395
Query: 309 ECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTAEVSADLGAS 368
E L DL+ VPAVLL + + K + E +G QDTAE AD S
Sbjct: 396 ENLADLKGKVPAVLLEDGKKKKGD------------IDEHAKG----QDTAE-KADTDVS 438
Query: 369 PEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEKDTERKVET 428
+ K+ E DTE
Sbjct: 439 ADSKA-------------------------------------------AAEVDTESVAIV 455
Query: 429 EKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSL 488
K G +DALL +LP ++D +DQL ++FC+LNSK++R RL++AL ++P+
Sbjct: 456 NK-----TVGAQVDALLVKLPDLQTKDQVDQLALDFCFLNSKASRNRLIKALQDIPKGRT 510
Query: 489 ELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNI-ETKIRNIRFIGELCK 547
+LLP YSR+VATL M D+ LI L+EEF L +K + + + ++ NIR++ EL K
Sbjct: 511 DLLPLYSRLVATLGQHMPDIPQGLIAYLDEEFRSLQRRKQKEFLGQVRMINIRYLAELTK 570
Query: 548 FKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLK 607
F + P ++F CLK CLDDF+ NI++ NLLE CGR+L R+PETS RM++ LE + R K
Sbjct: 571 FGVVPEHVIFHCLKVCLDDFSRTNIEIMGNLLENCGRYLLRNPETSPRMSSFLETVGRKK 630
Query: 608 NVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQL 667
+L + ++ENA Y PPER A K R P+ +IRKLL+ D++K + +L+ +
Sbjct: 631 AATHLGQQERMIIENAMYYVDPPERPAIQQKERSPMELFIRKLLYLDMNKRNYTKILKSI 690
Query: 668 RKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRL 725
RKL W + E L + F + HK KYG IHL+A L + L RYH EF ++VVD VLE I L
Sbjct: 691 RKLHWEESEVVDILERVFSRPHKVKYGNIHLLAILASALYRYHQEFVISVVDNVLESITL 750
Query: 726 GLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
GLELN++ Q+R+A +++LGELYNY+ +DS VIFD LY I+ FGH
Sbjct: 751 GLELNEFKFNQKRVAEVKYLGELYNYKMIDSPVIFDALYRIVAFGH 796
>gi|5262681|emb|CAB45771.1| hypothetical protein [Homo sapiens]
Length = 697
Score = 366 bits (939), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 176/325 (54%), Positives = 230/325 (70%), Gaps = 3/325 (0%)
Query: 449 PGCVSRDLIDQLTVEFCY-LNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKD 507
P CV+RDLID+ ++FC +N+K+NRK+LVRALF VPR L+LLP+Y+R+VATL CM D
Sbjct: 1 PNCVNRDLIDKAAMDFCMNMNTKANRKKLVRALFIVPRQRLDLLPFYARLVATLHPCMSD 60
Query: 508 VSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDF 567
V+ L ML +F F + KKDQ+NIETK + +RFIGEL KFK+ CLK L DF
Sbjct: 61 VAEDLCSMLRGDFRFHVRKKDQINIETKNKTVRFIGELTKFKMFTKNDTLHCLKMLLSDF 120
Query: 568 THHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLC 627
+HH+I++AC LLETCGRFL+RSPE+ +R + +LE +MR K +LD R+VT+VENAYY C
Sbjct: 121 SHHHIEMACTLLETCGRFLFRSPESHLRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYC 180
Query: 628 KPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMK 685
PP V K RPPL +Y+RKLL+ DL K + E VLRQ+RKLPW D E Y++ C +
Sbjct: 181 NPPPAEKTVKKKRPPLQEYVRKLLYKDLSKVTTEKVLRQMRKLPWQDQEVKDYVICCMIN 240
Query: 686 VHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFL 745
+ KY IH +A+L AGL Y ++ + VVD VLE+IRLG+E+N QRR++ +FL
Sbjct: 241 IWNVKYNSIHCVANLLAGLVLYQEDVGIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFL 300
Query: 746 GELYNYEHVDSSVIFDTLYLILVFG 770
GELYNY V+S+VIF TLY FG
Sbjct: 301 GELYNYRMVESAVIFRTLYSFTSFG 325
>gi|405970490|gb|EKC35388.1| Regulator of nonsense transcripts 2 [Crassostrea gigas]
Length = 1425
Score = 366 bits (939), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 171/332 (51%), Positives = 237/332 (71%), Gaps = 3/332 (0%)
Query: 442 DALLQRLPGCVSRDLIDQLTVEFCY-LNSKSNRKRLVRALFNVPRTSLELLPYYSRMVAT 500
+A +Q LP V++DLID+ VEFC N+KSNRK+LVRALF V RT +LLP+YSR VAT
Sbjct: 755 EAYIQTLPNSVNKDLIDKAAVEFCMNFNTKSNRKKLVRALFTVHRTRYDLLPFYSRFVAT 814
Query: 501 LSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCL 560
L CM DV+S L+Q+L+ +F + + KKDQ+NIE+K++ +RFIGEL KFK+ P CL
Sbjct: 815 LYPCMPDVASDLVQLLKGDFRWHVRKKDQINIESKLKTVRFIGELVKFKLFPKSEALHCL 874
Query: 561 KACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLV 620
K + DF+HHNI++AC LL++CGRFLYRS ++ R L+++MR K+ +L+ R+ T++
Sbjct: 875 KMLMFDFSHHNIEMACALLDSCGRFLYRSQDSHHRTKIYLDVMMRKKSALHLESRYTTMI 934
Query: 621 ENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCES--Y 678
ENA+Y PPE K+RPP+H+YIRKLL+ DL K + E VLRQ+R+LPW D E Y
Sbjct: 935 ENAFYYSNPPETQQSAQKIRPPMHEYIRKLLYKDLSKVTTEKVLRQMRRLPWDDPEIAFY 994
Query: 679 LLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRR 738
KC + V +Y IH A+L AGL+ YH+ A+ VVD VLE+IRLG+E+N QRR
Sbjct: 995 ATKCLIAVWNVRYNSIHCAANLLAGLAPYHEHIAIQVVDGVLEDIRLGMEVNHPKYNQRR 1054
Query: 739 LAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
++ +++LGELYNY ++S+V+F TLY + FG
Sbjct: 1055 VSGVKYLGELYNYRMLESAVVFKTLYSFITFG 1086
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 113/287 (39%), Gaps = 67/287 (23%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
+ IC L QRY DFS L++ K K ++ K R L+ EL +G
Sbjct: 455 VHICCLFFQRYSDFSNSLMENWQKYLLSKKD------EKITNPSKYRVDLRFFAELLSVG 508
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLG-LP------LSGP 172
+ + +N++ S L D++ NLT+L SF + G + G LP
Sbjct: 509 LF-NLGKGLNVLAGQLSFLTLGDKE-EHNNLTILTSFCKHCGDDYAGLLPRKIRLLAEKH 566
Query: 173 GQEIYEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGE 232
G EI KG ++A++K+ F TY Q+LL
Sbjct: 567 GVEIPRSTTKG-ELSAERKETFDTLLQTY----QKLLA---------------------- 599
Query: 233 LSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDA-SPASGKD 291
N + A+ LD P +PED +G D +P + +
Sbjct: 600 ---------------------NTAVFADLLDEDLPELPEDEIKRDDDTGFDIFNPETSAE 638
Query: 292 --SSVPEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVK 336
+ +++DE+ R+FYE LPDL+AF+P + ++E + K
Sbjct: 639 FQYTGDSTLFEDEDARSFYETLPDLKAFIPGICYKDSEQSGTKDGSK 685
>gi|83765331|dbj|BAE55474.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1215
Score = 365 bits (938), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 216/593 (36%), Positives = 318/593 (53%), Gaps = 85/593 (14%)
Query: 194 FKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYR 253
FK + Y V+ + + +L NA+ GE+ E+ +++EK KS + L
Sbjct: 292 FKSILNRYLEDVKAHVVRDQRALAAQSRRNAEAYVKSGEIFEDRQANFEKQSKSLEKLVA 351
Query: 254 NVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASG------------KDSSVPEPVWDD 301
N L EAL ++ P + E E A PAS + +W+D
Sbjct: 352 NTQVLCEALGVEMPALAEQ---------ESADPASSGGIGLVKTSEYLRGHGDGAGIWED 402
Query: 302 EETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTAEV 361
EE R FYE L DL+ VPAVLL + + K +
Sbjct: 403 EEERRFYENLVDLKGKVPAVLLEDGKKKKTD----------------------------- 433
Query: 362 SADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEKD 421
S E GK K+ ++ EK+ E +G+ EEK A D D D
Sbjct: 434 -----------SDEAGKKKDGEDLEKS-----ESAQGQPSEEK---AAADAD-------D 467
Query: 422 TERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALF 481
+ ++ G +DALL +LP ++D +DQL ++FC+LNSK++R RL++A+
Sbjct: 468 QSMAIASK------TVGAQVDALLAKLPDLQTKDHVDQLALDFCFLNSKASRNRLIKAVS 521
Query: 482 NVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNI-ETKIRNIR 540
+VP+ ++LLP YSR+VATL + D+ LI L+EEF L +K + + + ++ N+R
Sbjct: 522 DVPKGRIDLLPLYSRLVATLGQYLPDIPQGLITYLDEEFRSLQRRKSKEFLGQVRMSNVR 581
Query: 541 FIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANML 600
++ EL KF + P ++F C K LDDF+ NI++ LLE CGR+L R+PETS RMA+ L
Sbjct: 582 YLAELTKFGVVPEHIIFHCFKVSLDDFSRMNIEIIGYLLENCGRYLLRNPETSPRMASFL 641
Query: 601 EILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSI 660
E L R K V++L + ++ENA Y PP R A K R P+ YIR+L++ D++K +
Sbjct: 642 ETLGRKKTVQHLGQQERMIIENAVYYVDPPPRPAIQQKERTPMESYIRRLIYLDMNKRNY 701
Query: 661 EHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDE 718
+L+ +RKL W + E + + F K K KYG IHL+A L + L RYH EF + +VD
Sbjct: 702 TRILKSIRKLHWEEQEVVDIIERVFSKPVKVKYGNIHLLAILVSALYRYHQEFVIGIVDN 761
Query: 719 VLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
VLE+I LGLE ND+ Q+R+A +++LGELYNY+ +DS VIFDTLY I+ FGH
Sbjct: 762 VLEQITLGLEQNDFKFNQKRVAEVKYLGELYNYKMIDSPVIFDTLYRIVTFGH 814
>gi|391868350|gb|EIT77568.1| nonsense-mediated mRNA decay 2 protein [Aspergillus oryzae 3.042]
Length = 1155
Score = 365 bits (937), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 216/593 (36%), Positives = 318/593 (53%), Gaps = 85/593 (14%)
Query: 194 FKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYR 253
FK + Y V+ + + +L NA+ GE+ E+ +++EK KS + L
Sbjct: 297 FKSILNRYLEDVKAHVVRDQRALAAQSRRNAEAYVKSGEIFEDRQANFEKQSKSLEKLVA 356
Query: 254 NVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASG------------KDSSVPEPVWDD 301
N L EAL ++ P + E E A PAS + +W+D
Sbjct: 357 NTQVLCEALGVEMPALAEQ---------ESADPASSGGIGLVKTSEYLRGHGDGAGIWED 407
Query: 302 EETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTAEV 361
EE R FYE L DL+ VPAVLL + + K +
Sbjct: 408 EEERRFYENLVDLKGKVPAVLLEDGKKKKTD----------------------------- 438
Query: 362 SADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEKD 421
S E GK K+ ++ EK+ E +G+ EEK A D D D
Sbjct: 439 -----------SDEAGKKKDGEDLEKS-----ESAQGQPSEEK---AAADAD-------D 472
Query: 422 TERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALF 481
+ ++ G +DALL +LP ++D +DQL ++FC+LNSK++R RL++A+
Sbjct: 473 QSMAIASK------TVGAQVDALLAKLPDLQTKDHVDQLALDFCFLNSKASRNRLIKAVS 526
Query: 482 NVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNI-ETKIRNIR 540
+VP+ ++LLP YSR+VATL + D+ LI L+EEF L +K + + + ++ N+R
Sbjct: 527 DVPKGRIDLLPLYSRLVATLGQYLPDIPQGLITYLDEEFRSLQRRKSKEFLGQVRMSNVR 586
Query: 541 FIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANML 600
++ EL KF + P ++F C K LDDF+ NI++ LLE CGR+L R+PETS RMA+ L
Sbjct: 587 YLAELTKFGVVPEHIIFHCFKVSLDDFSRMNIEIIGYLLENCGRYLLRNPETSPRMASFL 646
Query: 601 EILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSI 660
E L R K V++L + ++ENA Y PP R A K R P+ YIR+L++ D++K +
Sbjct: 647 ETLGRKKTVQHLGQQERMIIENAVYYVDPPPRPAIQQKERTPMESYIRRLIYLDMNKRNY 706
Query: 661 EHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDE 718
+L+ +RKL W + E + + F K K KYG IHL+A L + L RYH EF + +VD
Sbjct: 707 TRILKSIRKLHWEEQEVVDIIERVFSKPVKVKYGNIHLLAILVSALYRYHQEFVIGIVDN 766
Query: 719 VLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
VLE+I LGLE ND+ Q+R+A +++LGELYNY+ +DS VIFDTLY I+ FGH
Sbjct: 767 VLEQITLGLEQNDFKFNQKRVAEVKYLGELYNYKMIDSPVIFDTLYRIVTFGH 819
>gi|392593488|gb|EIW82813.1| ARM repeat-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 1124
Score = 365 bits (937), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 265/766 (34%), Positives = 391/766 (51%), Gaps = 105/766 (13%)
Query: 63 ICSLLHQRY-KDFSPCLIDGLLKVFFPGKSG-------EDLDADRNLKAMKKRSTLKLLL 114
IC+L H+R+ ++ LI L V P + + + +++ ++R L++
Sbjct: 102 ICAL-HRRFPAAYTGALIPLLGGVLAPPNKAALSALPQDQREKEDSVRLSRQRPVLRVCA 160
Query: 115 ELYFIGIIEDS------SIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGL 167
EL +GII D + +KDL S D T ++L LL++F + R +LG+
Sbjct: 161 ELALVGIIRDGPGRSGGEWIMKAVKDLLS------NDPTLSSLPLLSTFLKNYSRPYLGI 214
Query: 168 PLSGPGQ----------------EIYEEF----FKGLNITADQ-KKIFKKAFHTYYNAVQ 206
P Q E+ F +G + + + FK+ Y++ V
Sbjct: 215 VPPQPKQSQTDAESGQAASSAQSEVQSHFPPIVHEGEELVEQEIRDRFKRMCEGYFDNVA 274
Query: 207 ELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQP 266
+ L EH L+ + N + GE+ E+ +YEK+ KSY+ L N +L+E L M
Sbjct: 275 KKLVIEHKRLQDQDRRNHEAYIRSGEIFEDRQQAYEKMTKSYEKLLSNCQTLSELLYMPM 334
Query: 267 PVMPEDVHTTR-VTSGEDASPASGKDS---SVPEPVWDDEETRAFYECLPDLRAFVPAVL 322
P +P T + G + SG D SV W+DEE R F+E + DL+ FVP +
Sbjct: 335 PSLPTASQKTESIQIGTNTGLHSGDDDEGLSVGGK-WEDEEERRFFEDIQDLKDFVPKSV 393
Query: 323 LG-EAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTAEVSADLG--------ASPEGKS 373
LG E E + + D A E + + A D ++ +L P G +
Sbjct: 394 LGIEGEKQEDTEG--------DEAKEKLEKERAEADVKKLQEELQDLKLDGKPPQPNGDT 445
Query: 374 VEK----GKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEKDTERKVETE 429
V++ G D E K PD E K + + P +
Sbjct: 446 VQENRVNGHDGE-------KTPDLESPKAGSPPGSPQLAPQGPSQ--------------- 483
Query: 430 KEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLE 489
L ALL RLP +R +IDQ VEF +LNSK+ RKRLV+ L +VP+ +
Sbjct: 484 ----------MLTALLARLPDATNRAMIDQAAVEFTFLNSKAARKRLVKFLGSVPKNRTD 533
Query: 490 LLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMN--IETKIRNIRFIGELCK 547
LLP+YSR+ ATL+ M D+ + L+ +L+EEF +L KK+ + ET+I+NI F+ L K
Sbjct: 534 LLPHYSRLAATLNKYMPDIGTELVAILDEEFRYLQRKKNVVKELAETRIKNIAFLSNLTK 593
Query: 548 FKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLK 607
F + P+ L+ K CLDDF+ N++ LLE CGRFL RS +T R MLE++ R +
Sbjct: 594 FCVVPSHLILHMFKVCLDDFSGTNVENIALLLEGCGRFLLRSEDTRARFETMLELMRRKQ 653
Query: 608 NVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQL 667
++++ D R + L+ENAYY C PPER+ R K R P+ ++R L+F L K +I+ VL+ +
Sbjct: 654 SMQHFDQRQILLLENAYYQCNPPERAPREEKQRTPIELFMRHLIFDVLAKKTIDKVLKLI 713
Query: 668 RKLPWSD--CESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRL 725
RKL W D L K F K K KY I L+A LT L RYH FA+AVVD+VLE++R+
Sbjct: 714 RKLDWDDPAVVRSLHKIFTKPWKIKYINISLLAMLTYDLQRYHPSFAIAVVDQVLEDVRI 773
Query: 726 GLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
GLE N YG QRRLA M++LGELY Y V S+++FDTL+ ++ FGH
Sbjct: 774 GLEQNIYGANQRRLATMKYLGELYIYRVVGSALVFDTLWSLVTFGH 819
>gi|238482637|ref|XP_002372557.1| nonsense-mediated mRNA decay factor (Upf2), putative [Aspergillus
flavus NRRL3357]
gi|220700607|gb|EED56945.1| nonsense-mediated mRNA decay factor (Upf2), putative [Aspergillus
flavus NRRL3357]
Length = 1213
Score = 365 bits (936), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 212/584 (36%), Positives = 317/584 (54%), Gaps = 67/584 (11%)
Query: 194 FKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYR 253
FK + Y V+ + + +L NA+ GE+ E+ +++EK KS + L
Sbjct: 355 FKSILNRYLEDVKAHVVRDQRALAAQSRRNAEAYVKSGEIFEDRQANFEKQSKSLEKLVA 414
Query: 254 NVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASG---KDSSVPEPVWDDEETRAFYEC 310
N L EAL ++ P + E +SG + + +W+DEE R FYE
Sbjct: 415 NTQVLCEALGVEMPALAEQESADPASSGGIGLVKTSEYLRGHGDGAGIWEDEEERRFYEN 474
Query: 311 LPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTAEVSADLGASPE 370
L DL+ VPAVLL + + K +
Sbjct: 475 LVDLKGKVPAVLLEDGKKKKTD-------------------------------------- 496
Query: 371 GKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEKDTERKVETEK 430
S E GK K+ ++ EK+ E +G+ EEK A D D D + ++
Sbjct: 497 --SDEAGKKKDGEDLEKS-----ESAQGQPSEEK---AAADAD-------DQSMAIASK- 538
Query: 431 EKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLEL 490
G +DALL +LP ++D +DQL ++FC+LNSK++R RL++A+ +VP+ ++L
Sbjct: 539 -----TVGAQVDALLAKLPDLQTKDHVDQLALDFCFLNSKASRNRLIKAVSDVPKGRIDL 593
Query: 491 LPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNI-ETKIRNIRFIGELCKFK 549
LP YSR+VATL + D+ LI L+EEF L +K + + + ++ N+R++ EL KF
Sbjct: 594 LPLYSRLVATLGQYLPDIPQGLITYLDEEFRSLQRRKSKEFLGQVRMSNVRYLAELTKFG 653
Query: 550 IAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNV 609
+ P ++F C K LDDF+ NI++ LLE CGR+L R+PETS RMA+ LE L R K V
Sbjct: 654 VVPEHIIFHCFKVSLDDFSRMNIEIIGYLLENCGRYLLRNPETSPRMASFLETLGRKKTV 713
Query: 610 KNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRK 669
++L + ++ENA Y PP R A K R P+ YIR+L++ D++K + +L+ +RK
Sbjct: 714 QHLGQQERMIIENAVYYVDPPPRPAIQQKERTPMESYIRRLIYLDMNKRNYTRILKSIRK 773
Query: 670 LPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGL 727
L W + E + + F K K KYG IHL+A L + L RYH EF + +VD +LE+I LGL
Sbjct: 774 LHWEEQEVVDIIERVFSKPVKVKYGNIHLLAILVSALYRYHQEFVIGIVDNILEQITLGL 833
Query: 728 ELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
E ND+ Q+R+A +++LGELYNY+ +DS VIFDTLY I+ FGH
Sbjct: 834 EQNDFKFNQKRVAEVKYLGELYNYKMIDSPVIFDTLYRIVTFGH 877
>gi|317139388|ref|XP_001817476.2| hypothetical protein AOR_1_710174 [Aspergillus oryzae RIB40]
Length = 1658
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 216/593 (36%), Positives = 318/593 (53%), Gaps = 85/593 (14%)
Query: 194 FKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYR 253
FK + Y V+ + + +L NA+ GE+ E+ +++EK KS + L
Sbjct: 800 FKSILNRYLEDVKAHVVRDQRALAAQSRRNAEAYVKSGEIFEDRQANFEKQSKSLEKLVA 859
Query: 254 NVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASG------------KDSSVPEPVWDD 301
N L EAL ++ P + E E A PAS + +W+D
Sbjct: 860 NTQVLCEALGVEMPALAEQ---------ESADPASSGGIGLVKTSEYLRGHGDGAGIWED 910
Query: 302 EETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTAEV 361
EE R FYE L DL+ VPAVLL + + K +
Sbjct: 911 EEERRFYENLVDLKGKVPAVLLEDGKKKKTD----------------------------- 941
Query: 362 SADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEKD 421
S E GK K+ ++ EK+ E +G+ EEK A D D D
Sbjct: 942 -----------SDEAGKKKDGEDLEKS-----ESAQGQPSEEK---AAADAD-------D 975
Query: 422 TERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALF 481
+ ++ G +DALL +LP ++D +DQL ++FC+LNSK++R RL++A+
Sbjct: 976 QSMAIASK------TVGAQVDALLAKLPDLQTKDHVDQLALDFCFLNSKASRNRLIKAVS 1029
Query: 482 NVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNI-ETKIRNIR 540
+VP+ ++LLP YSR+VATL + D+ LI L+EEF L +K + + + ++ N+R
Sbjct: 1030 DVPKGRIDLLPLYSRLVATLGQYLPDIPQGLITYLDEEFRSLQRRKSKEFLGQVRMSNVR 1089
Query: 541 FIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANML 600
++ EL KF + P ++F C K LDDF+ NI++ LLE CGR+L R+PETS RMA+ L
Sbjct: 1090 YLAELTKFGVVPEHIIFHCFKVSLDDFSRMNIEIIGYLLENCGRYLLRNPETSPRMASFL 1149
Query: 601 EILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSI 660
E L R K V++L + ++ENA Y PP R A K R P+ YIR+L++ D++K +
Sbjct: 1150 ETLGRKKTVQHLGQQERMIIENAVYYVDPPPRPAIQQKERTPMESYIRRLIYLDMNKRNY 1209
Query: 661 EHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDE 718
+L+ +RKL W + E + + F K K KYG IHL+A L + L RYH EF + +VD
Sbjct: 1210 TRILKSIRKLHWEEQEVVDIIERVFSKPVKVKYGNIHLLAILVSALYRYHQEFVIGIVDN 1269
Query: 719 VLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
VLE+I LGLE ND+ Q+R+A +++LGELYNY+ +DS VIFDTLY I+ FGH
Sbjct: 1270 VLEQITLGLEQNDFKFNQKRVAEVKYLGELYNYKMIDSPVIFDTLYRIVTFGH 1322
>gi|119482918|ref|XP_001261487.1| nonsense-mediated mRNA decay factor (Upf2), putative [Neosartorya
fischeri NRRL 181]
gi|119409642|gb|EAW19590.1| nonsense-mediated mRNA decay factor (Upf2), putative [Neosartorya
fischeri NRRL 181]
Length = 1153
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 213/594 (35%), Positives = 319/594 (53%), Gaps = 80/594 (13%)
Query: 194 FKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYR 253
F+ Y V+ + + +L NA+ GE+ E+ ++++K KS + L
Sbjct: 296 FRSILSRYLEDVKAHVVRDQRALAAQSRRNAEAYVKSGEIFEDRQANFDKQSKSLEKLVA 355
Query: 254 NVSSLAEALDMQPPVMPED-------------VHTTRVTSGEDASPASGKDSSVPEPVWD 300
N L E L ++ P + E V T+ G+ P +W+
Sbjct: 356 NTQVLCEVLGVEMPALAEQEAADSASSGGIGLVKTSEYLRGQGEGPG----------IWE 405
Query: 301 DEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTAE 360
DEE R FYE L DL+ VP+VLL + + K +PD + D A+
Sbjct: 406 DEEERRFYENLVDLKGKVPSVLLEDGKKK-----------------KPD-----SDDAAK 443
Query: 361 VSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEK 420
D A+P+ S EK + ++ P E+ + E++ A
Sbjct: 444 KKTDGEATPDWSS--------EKPENASQIPTSEEKSAAEAEDQSTAIAS---------- 485
Query: 421 DTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRAL 480
K V G +DALL RLP ++D +DQL +EFC+LNSK++R RL++A+
Sbjct: 486 -------------KTV-GAQVDALLARLPELQTKDQVDQLALEFCFLNSKASRNRLIKAV 531
Query: 481 FNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNI-ETKIRNI 539
+VP+ ++LLP YSR+VATL ++D+ LI L+EEF L +K + + + ++ NI
Sbjct: 532 SDVPKGRVDLLPLYSRLVATLGQYLQDIPQGLITYLDEEFRSLQRRKSKEFLGQVRMTNI 591
Query: 540 RFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANM 599
R+ EL KF + P ++F C K LDDF+ NI++ +LLE CGR+L R+PETS RMA+
Sbjct: 592 RYFAELTKFGVVPEHIIFHCFKVSLDDFSRMNIEIIGHLLENCGRYLLRNPETSPRMASF 651
Query: 600 LEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSS 659
LE L R K V++L + ++ENA Y PP R A K R P+ YIRKL++ D++K +
Sbjct: 652 LEKLGRKKTVQHLGQQERMIIENAMYYVDPPPRPAIQQKERTPMESYIRKLIYLDMNKRN 711
Query: 660 IEHVLRQLRKLPW--SDCESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVD 717
+L+ +RKL W D L + F K K KYG IHL+A L + L RYH +F ++VVD
Sbjct: 712 YTKILKSIRKLHWEEQDVVDILERVFSKPVKVKYGNIHLLAILVSALYRYHQDFVISVVD 771
Query: 718 EVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
+LE+I LGLE ND+ Q+R+A +++LGELYNY+ +DS V+FDTLY I+ FG+
Sbjct: 772 NILEQITLGLEQNDFKFNQKRVAEVKYLGELYNYKMIDSPVVFDTLYRIVTFGY 825
>gi|70986961|ref|XP_748966.1| nonsense-mediated mRNA decay factor (Upf2) [Aspergillus fumigatus
Af293]
gi|66846596|gb|EAL86928.1| nonsense-mediated mRNA decay factor (Upf2), putative [Aspergillus
fumigatus Af293]
Length = 1162
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 214/594 (36%), Positives = 320/594 (53%), Gaps = 80/594 (13%)
Query: 194 FKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYR 253
FK Y V+ + + +L NA+ GE+ E+ ++++K KS + L
Sbjct: 294 FKSILSRYLEDVKAHVVRDQRALAAQSRRNAEAYVKSGEIFEDRQANFDKQSKSLEKLVA 353
Query: 254 NVSSLAEALDMQPPVMPED-------------VHTTRVTSGEDASPASGKDSSVPEPVWD 300
N L E L ++ PV+ E V T+ G+ P +W+
Sbjct: 354 NTQVLCEVLGVEMPVLAEQEAADSASSGGIGLVKTSEYLRGQGEGPG----------IWE 403
Query: 301 DEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTAE 360
DEE R FYE L DL+ VP VLL + + K ++ + D A+
Sbjct: 404 DEEERRFYENLVDLKGKVPPVLLEDGKKKKSD----------------------SDDAAK 441
Query: 361 VSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEK 420
D A+P+ SVEK ++ ++ P E+ + E++ A
Sbjct: 442 KRTDGEATPDS-SVEKPENA-------SQTPTSEEKSAAEAEDQSTAIAS---------- 483
Query: 421 DTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRAL 480
K V G +DALL RLP ++D +DQL +EFC+LNSK++R RL++A+
Sbjct: 484 -------------KTV-GAQVDALLARLPELQTKDQVDQLALEFCFLNSKASRNRLIKAV 529
Query: 481 FNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNI-ETKIRNI 539
+VP+ ++LLP YSR+VATL ++D+ LI L+EEF L +K + + + ++ NI
Sbjct: 530 SDVPKGRVDLLPLYSRLVATLGQYLQDIPQGLITYLDEEFRSLQRRKSKEFLGQVRMTNI 589
Query: 540 RFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANM 599
R+ EL KF + P ++F C K LDDF+ NI++ +LLE CGR+L R+PETS RMA+
Sbjct: 590 RYFAELTKFGVVPEHIIFHCFKVSLDDFSRMNIEIIGHLLENCGRYLLRNPETSPRMASF 649
Query: 600 LEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSS 659
LE L R K V++L + ++ENA Y PP R A K R P+ YIRKL++ D++K +
Sbjct: 650 LEKLGRKKAVQHLGQQERMIIENAMYYVDPPPRPAIQQKERTPMESYIRKLIYLDMNKRN 709
Query: 660 IEHVLRQLRKLPW--SDCESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVD 717
VL+ +RKL W D + + F K K KYG IHL+A L + L RYH +F ++VVD
Sbjct: 710 YTKVLKSIRKLHWEEQDVVDIMERVFSKPVKVKYGNIHLLAILVSALYRYHQDFVISVVD 769
Query: 718 EVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
+LE+I LGLE ND+ Q+R+A +++LGELYNY+ +DS V+FDTLY I+ FG+
Sbjct: 770 NILEQITLGLEQNDFKFNQKRVAEVKYLGELYNYKMIDSPVVFDTLYRIVTFGY 823
>gi|328854191|gb|EGG03325.1| hypothetical protein MELLADRAFT_90304 [Melampsora larici-populina
98AG31]
Length = 1127
Score = 363 bits (931), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 242/743 (32%), Positives = 373/743 (50%), Gaps = 72/743 (9%)
Query: 61 LKICSLLHQRY-----KDFSPCLIDGLL---KVFFPGKSGEDLDADRNLKAMKKRSTLKL 112
+++ S LH+R+ + F GL K + + + D + + + +++RS L+
Sbjct: 96 VEVISALHRRFPITFTQPFLQHFTAGLAVPNKQYLASLALDQRDREESARILRQRSLLRC 155
Query: 113 LLELYFIGIIEDSSIFINIIKDLTSIEHLKD-----RDTTQTNLTLLASFARQGRIFLGL 167
L E +G+I S+ I + T+ LKD ++ L L SF++Q L
Sbjct: 156 LAEFDLVGLIHPSTAGKTISEGETTFNTLKDLLTADKEALVIPLPLAVSFSKQFTT-LYF 214
Query: 168 PLSGPGQEIYEEFFKGLNITADQ-------KKIFKKAFHTYYNAVQELLQAEHTSLRQME 220
P + P E + + D+ K+ F K F Y++A+ +H LR+ E
Sbjct: 215 PSTAPFATTPAEASEARKVEFDEDIIANSVKEKFGKLFRQYFDALGRKAVKDHIKLRETE 274
Query: 221 NENAKILNAKGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTS 280
N + G++ E+ ++EKL K + L+ + SL+E L + PP +PE ++ +
Sbjct: 275 KRNTEAAIRSGQIFEDRIQAFEKLSKDQEKLWTGIQSLSETLSLTPPTLPEASASSPTNA 334
Query: 281 GEDASPAS-GKDSSVPEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLE 339
P++ G S + +W DEE + FYE L DLR VP +LLG
Sbjct: 335 ITGTGPSAFGGVSDLG--IWADEEEKKFYEELIDLRDEVPVMLLG--------------- 377
Query: 340 QPTDPASEPDQGQLAAQDTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGK 399
D E A+ E + E+ K +EE EK KD
Sbjct: 378 ----------------LDAPEKKAETSDPVEAEKDEQAKLEEEMEKLAVKDLSLGSDDPL 421
Query: 400 DKEEKDKEKAKDPDKEKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQ 459
D E D+++ + + G E L L AL RL + ID+
Sbjct: 422 DHPEDDEQEEINQNASAGPVP------PLTGEALASGPAARLTALFTRLDDVYGAEAIDR 475
Query: 460 LTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLI----QM 515
+TVEF YLNSK+ R RL++ +V + ++LLPY++RM ATLS M D+ + L+
Sbjct: 476 ITVEFAYLNSKAARNRLIKHFLSVNKNRMDLLPYFARMTATLSKYMPDMLAGLLSGLKHQ 535
Query: 516 LEEEFNFLINKKD--QMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNID 573
LE+EF +L KK Q + +NIR+I EL KF + P+ + C+K C+D+ T NI+
Sbjct: 536 LEDEFRYLQRKKSASQDFYALRSKNIRYISELTKFNLTPSHSILHCIKVCVDELTGPNIE 595
Query: 574 VACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYL---CKPP 630
CNLLE CGR++ R+ T +M +LE + R K +N+D R V ++ENAYY C PP
Sbjct: 596 NLCNLLEGCGRWVLRNERTRDKMTQLLEQMKRKKASQNMDSRQVMMLENAYYQAVECNPP 655
Query: 631 ERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHK 688
+R K+R P+ ++R L+ L+K S++ V++ LRKL W E L KV K
Sbjct: 656 DRPVIEPKIRTPMELFMRYQLYDCLNKKSVDKVIKILRKLHWDTPEVPKILKSILTKVWK 715
Query: 689 GKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGEL 748
KYG I+L A + LS+YH +F V+++D+VLE +R G+ELN + Q+R+A +++LGEL
Sbjct: 716 IKYGNIYLFAIVVHDLSKYHSDFTVSIIDQVLENVRFGMELNLFKDNQQRIASIKYLGEL 775
Query: 749 YNYEHVDSSVIFDTLYLILVFGH 771
YNY VDS VIFDTL+ + FGH
Sbjct: 776 YNYRVVDSKVIFDTLWSFVTFGH 798
>gi|390602654|gb|EIN12047.1| transcription factor [Punctularia strigosozonata HHB-11173 SS5]
Length = 1140
Score = 362 bits (930), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 258/773 (33%), Positives = 387/773 (50%), Gaps = 106/773 (13%)
Query: 61 LKICSLLHQRYKD-FSPCLIDGLLKVFFPGKSG-------EDLDADRNLKAMKKRSTLKL 112
++I S +H+R+ F+P ++ L P E + D + K+R L++
Sbjct: 101 VEIISAMHRRFPTMFTPSILSALSAALAPPNRATMTSLLPEQREKDDAARISKQRPVLRV 160
Query: 113 LLELYFIGIIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGL---- 167
EL +GII+ + + IK+L S D T ++L LL +F + R +LG+
Sbjct: 161 CSELALVGIIKSAEWIMKAIKELLS------NDPTLSSLPLLTTFLKSYSRPYLGIVPPA 214
Query: 168 -------PLSGPGQEIYEE--------FFKGLN-----ITADQKKIFKKAFHTYYNAVQE 207
S PG E F N ++ D + FK+ Y+ V +
Sbjct: 215 NVAKQISSASEPGTMSAESSNGDAAGAFPTLFNEERELVSKDVRDRFKRMCEGYFENVSK 274
Query: 208 LLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPP 267
L EH L++ + N + GE+ E+ +YEK+ +SY+ L + +L+E+L + P
Sbjct: 275 KLVIEHKRLQEQDRRNHEAYIRSGEIFEDRQQAYEKMTRSYEKLLASCQTLSESLYLPMP 334
Query: 268 VMPEDVHTT-RVTSGEDASPASGKDSS-VPEPV---WDDEETRAFYECLPDLRAFVPAVL 322
+P + G + + G D V P W+DEE R F+E + DL+ FVP
Sbjct: 335 ELPTASQKADSILIGSNTNSLIGGDGEEVIMPAGAKWEDEEERRFFEDIQDLKDFVP--- 391
Query: 323 LGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTAEVSADLGASPEGKSVEKGKDKEE 382
+G L ++ EVS EK K +
Sbjct: 392 ---------------------------RGVLGIEEDVEVS--------HTDEEKEKSDKA 416
Query: 383 KEKEKAKDPDKE-KGKGKDKEEKDKEKAKDPDKEKGKEKDTERKVETEKEKLKGVEGTN- 440
+ +E+A+ D+E + G+ + E++ D E + + +++ V GT
Sbjct: 417 RMEEEARKIDEELEVLGRRENEQNGVPLTSADAEAEPHINGAEEYADDEDASTLVPGTPK 476
Query: 441 ------------------LDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFN 482
L ALL RLP C +R +IDQ ++F +LNSK+ RKRLVR L
Sbjct: 477 TASPPGTPQLAPQGPSQLLTALLARLPDCTNRAMIDQAAIDFAFLNSKAARKRLVRFLSQ 536
Query: 483 VPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMN--IETKIRNIR 540
P+ ++LLP+YSR+VATL M D+ S ++ +L+EEF +L KK + E +++NI
Sbjct: 537 TPKNRIDLLPHYSRLVATLHKYMPDLGSEVVAVLDEEFRYLQRKKKVVKELAEVRLKNIT 596
Query: 541 FIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANML 600
FI L KF++ P ++ K CLDDF+ N+D LLE CGRFL RS +T R A ML
Sbjct: 597 FISNLTKFRVVPPHVILHMFKVCLDDFSGTNVDNLALLLEGCGRFLLRSDDTRERFAKML 656
Query: 601 EILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSI 660
E++ R +++++ D R + ++ENAYY C PPER+ R K R P+ +IR L++ L K +I
Sbjct: 657 ELMRRKQSMQHFDQRQIMMLENAYYQCNPPERAPREMKQRTPMELFIRHLIYDVLAKKTI 716
Query: 661 EHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDE 718
+ VL+ +RKL W D L K F K K KY I L+A LT L RYH F VAVVD+
Sbjct: 717 DKVLKLIRKLDWDDASVARTLHKVFTKPWKIKYSNISLLAMLTYDLQRYHPAFTVAVVDQ 776
Query: 719 VLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
VLE+IR+GLE N Y QRRLA M++LGELY Y S +IFDTL+ ++ FGH
Sbjct: 777 VLEDIRIGLEHNVYNTNQRRLATMKYLGELYIYRLFGSGIIFDTLWSLVTFGH 829
>gi|159123264|gb|EDP48384.1| nonsense-mediated mRNA decay factor (Upf2), putative [Aspergillus
fumigatus A1163]
Length = 1112
Score = 362 bits (930), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 214/594 (36%), Positives = 320/594 (53%), Gaps = 80/594 (13%)
Query: 194 FKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYR 253
FK Y V+ + + +L NA+ GE+ E+ ++++K KS + L
Sbjct: 298 FKSILSRYLEDVKAHVVRDQRALAAQSRRNAEAYVKSGEIFEDRQANFDKQSKSLEKLVA 357
Query: 254 NVSSLAEALDMQPPVMPED-------------VHTTRVTSGEDASPASGKDSSVPEPVWD 300
N L E L ++ PV+ E V T+ G+ P +W+
Sbjct: 358 NTQVLCEVLGVEMPVLAEQEAADSASSGGIGLVKTSEYLRGQGEGPG----------IWE 407
Query: 301 DEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTAE 360
DEE R FYE L DL+ VP VLL + + K ++ + D A+
Sbjct: 408 DEEERRFYENLVDLKGKVPPVLLEDGKKKKSD----------------------SDDAAK 445
Query: 361 VSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEK 420
D A+P+ SVEK ++ ++ P E+ + E++ A
Sbjct: 446 KRTDGEATPDS-SVEKPENA-------SQTPTSEEKSAAEAEDQSTAIAS---------- 487
Query: 421 DTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRAL 480
K V G +DALL RLP ++D +DQL +EFC+LNSK++R RL++A+
Sbjct: 488 -------------KTV-GAQVDALLARLPELQTKDQVDQLALEFCFLNSKASRNRLIKAV 533
Query: 481 FNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNI-ETKIRNI 539
+VP+ ++LLP YSR+VATL ++D+ LI L+EEF L +K + + + ++ NI
Sbjct: 534 SDVPKGRVDLLPLYSRLVATLGQYLQDIPQGLITYLDEEFRSLQRRKSKEFLGQVRMTNI 593
Query: 540 RFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANM 599
R+ EL KF + P ++F C K LDDF+ NI++ +LLE CGR+L R+PETS RMA+
Sbjct: 594 RYFAELTKFGVVPEHIIFHCFKVSLDDFSRMNIEIIGHLLENCGRYLLRNPETSPRMASF 653
Query: 600 LEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSS 659
LE L R K V++L + ++ENA Y PP R A K R P+ YIRKL++ D++K +
Sbjct: 654 LEKLGRKKAVQHLGQQERMIIENAMYYVDPPPRPAIQQKERTPMESYIRKLIYLDMNKRN 713
Query: 660 IEHVLRQLRKLPW--SDCESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVD 717
VL+ +RKL W D + + F K K KYG IHL+A L + L RYH +F ++VVD
Sbjct: 714 YTKVLKSIRKLHWEEQDVVDIMERVFSKPVKVKYGNIHLLAILVSALYRYHQDFVISVVD 773
Query: 718 EVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
+LE+I LGLE ND+ Q+R+A +++LGELYNY+ +DS V+FDTLY I+ FG+
Sbjct: 774 NILEQITLGLEQNDFKFNQKRVAEVKYLGELYNYKMIDSPVVFDTLYRIVTFGY 827
>gi|157126657|ref|XP_001660932.1| hypothetical protein AaeL_AAEL010598 [Aedes aegypti]
gi|108873168|gb|EAT37393.1| AAEL010598-PA [Aedes aegypti]
Length = 1139
Score = 361 bits (927), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 251/729 (34%), Positives = 374/729 (51%), Gaps = 88/729 (12%)
Query: 57 LVYFLKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLEL 116
+V L +CS LHQ Y +FSP ++ K+ K+GE + K R L+ EL
Sbjct: 126 VVPALMLCSKLHQTYAEFSPSFLENWQKILH-VKAGEKIG-----NPSKMRVDLRFYAEL 179
Query: 117 YFIGIIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGLPLSGPGQE 175
+GI + + LT++ +D+D +NL+++ SF R G + GL + E
Sbjct: 180 ISVGIFSNKVGLPLLGACLTALIS-QDKDE-HSNLSIILSFCRHCGDEYAGL-VPKKIME 236
Query: 176 IYEEFFKGLN----ITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKG 231
+ ++F + +T+D+++ + YY V E L EH L+ E ++L +KG
Sbjct: 237 LAKQFEVAIPSSNLLTSDKQQNLRNLLKDYYQTVCEHLTNEHKQLQYAEKSRRRMLESKG 296
Query: 232 ELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASGK- 290
E+ E E L+ SY+ L + ++A+ L+ +PE +T +A P+ G
Sbjct: 297 EVPNEKKEQIEVLQNSYEKLLTSAQTMADLLN---ETLPE------LTVEAEACPSEGNV 347
Query: 291 -DSSVPEPV-----WDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDP 344
DS E W DE+TR FY LPDLR F+P + E +EP++
Sbjct: 348 IDSIGDEQFANLDPWGDEDTRNFYVNLPDLRQFLPNYCGKKEEIIPDEPAM--------- 398
Query: 345 ASEPDQGQLAAQDTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEK 404
T EV D+ VE+ +D EE DP E + + EE+
Sbjct: 399 -------------TEEV-LDM-------EVEQEQDTEE-----VGDPPSEISETAEPEEE 432
Query: 405 DKEKAKDPDKEKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEF 464
P +E + +A + L CV+ +LID +EF
Sbjct: 433 PTTAPSTPHHHANRE--------------------HFEAFIANLQNCVNTELIDSAAIEF 472
Query: 465 CY-LNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFL 523
LN+K+NRKRLV+ LF V RT L+LLP Y+R+VA ++ DV+ L QML+ +F +
Sbjct: 473 LLNLNTKNNRKRLVKVLFGVQRTRLDLLPMYARLVAIINLVSADVAIDLCQMLKVDFKYQ 532
Query: 524 INKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCG 583
I KKDQ+NIETKI+ +R+IGEL KF + CLK L +F HH+I++ C LE CG
Sbjct: 533 IKKKDQINIETKIKVVRYIGELVKFGLYNKIEALFCLKCLLHNFQHHHIEMTCAFLEVCG 592
Query: 584 RFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPL 643
+LY S ++ +R LE +MRLK +D RH VE AYYL K PE KVRP
Sbjct: 593 VYLYNSKDSRLRTNVYLEQMMRLKTNTTMDSRHAQQVETAYYLVKQPEGMRIQRKVRPLF 652
Query: 644 HQYIRKLLFSDLDKSSIEHVLRQLRKLPWS--DCESYLLKCFMKVHKGKYGQIHLIASLT 701
H YIR L+F +L+KS+++ +++ LR+L W D Y +KC K + +Y I +A L
Sbjct: 653 HTYIRHLIFEELNKSNVDKMIKLLRRLDWEDRDIHDYAVKCLSKAYSIRYHLIRSLADLV 712
Query: 702 AGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFD 761
+GLS Y ++ V V+D V E+IR GLE++D + QRR+A ++LGELYNY V+S + +
Sbjct: 713 SGLSSYQEKAVVKVIDAVFEDIRAGLEIHDTKLAQRRIAMAKYLGELYNYRLVESKNVLN 772
Query: 762 TLYLILVFG 770
TLY I+ G
Sbjct: 773 TLYSIISLG 781
>gi|403157993|ref|XP_003307345.2| hypothetical protein PGTG_00295 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375163635|gb|EFP74339.2| hypothetical protein PGTG_00295 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1145
Score = 358 bits (920), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 239/752 (31%), Positives = 385/752 (51%), Gaps = 77/752 (10%)
Query: 61 LKICSLLHQRYKD-FSPCLIDGLL-------KVFFPGKSGEDLDADRNLKAMKKRSTLKL 112
+++ S LHQR+ F+ I L K + G + + + + N + +++RS L+
Sbjct: 109 IEVISTLHQRFSSSFTEPFIQQFLSGLALPSKQYLAGLAADQREREENSRIIRQRSLLRC 168
Query: 113 LLELYFIGII-----------EDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ- 160
L E +G++ ED ++KDL + +++ L L SF++Q
Sbjct: 169 LAEFDLVGLVRAVSKQGSTNAEDGETTFGVLKDLLT----ANKEALLIPLPLAVSFSKQF 224
Query: 161 GRIFL------GLPLSGPGQEIYEEFFKGLNITADQ------KKIFKKAFHTYYNAVQEL 208
G ++L G P E + GL T D K+ F+K F Y++A+
Sbjct: 225 GSLYLPTSISSGAPAGPTPSEANNQ--NGLFTTDDMIIKPAVKEKFRKLFGQYFDALSRK 282
Query: 209 LQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPV 268
++H L+++E +N + G++ ++ ++EKL K + L+ + SLAE L + PP
Sbjct: 283 AVSDHVKLQELEKKNCEAAIRSGQIFDDRVQTFEKLTKDQEKLWNGILSLAETLSLSPPT 342
Query: 269 M--PEDVHTTRVTSGEDASPASGKDSSVPEPVWDDEETRAFYECLPDLRAFVPAVLLGEA 326
+ P+ ++ +G S G +S +W DEE + FYE L DL+ VP +LLG +
Sbjct: 343 LPGPDAASSSNAITGTGLSSNFGAGAS-ELGIWSDEEEKKFYEDLFDLKDEVPTMLLGIS 401
Query: 327 EHKANEPSVKPLEQPTDPASEPDQGQLAAQDTAEVSADLGASPEGKSVEKGKDKEEKEKE 386
A+ EV AD +S+ + K ++E EK
Sbjct: 402 AD--------------------------AKKETEVKADQHDGDNDQSIAQTKLEQEMEKL 435
Query: 387 KAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEKDTERKVE--TEKEKLKGVEGTNLDAL 444
+ KD EE + K D D+ K E + L L AL
Sbjct: 436 EMKDLSTASDM---PEEPGELKRVDSDELKQGSSSLGATAEPSAASDTLASGPAARLTAL 492
Query: 445 LQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTC 504
RL + D +D++ VEF YLNSK+ R RL++ L V + +L+ Y++RM+A LS
Sbjct: 493 FTRLDQVYNSDALDKIAVEFAYLNSKAARNRLIKHLSGVNKNRTDLIQYFARMLAILSKY 552
Query: 505 MKDVSSMLIQMLEEEFNFLINKKDQMNIE---TKIRNIRFIGELCKFKIAPAGLVFSCLK 561
M DV + ++ + +EF +L K+ + E + +NIR+I EL KF + P+ L+ +K
Sbjct: 553 MPDVLNGILSHVHDEFRYLQRKRKFVGQELHAIRSKNIRWISELTKFNLVPSHLILHIIK 612
Query: 562 ACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVE 621
C+DD N++ C+LLE CGR++ + ET ++MA +L+ + R K +NLD R + L+E
Sbjct: 613 VCIDDLHGTNVENLCDLLEGCGRWVLNNAETRVKMAQLLDQMNRKKASQNLDSRQIMLLE 672
Query: 622 NAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCESY-LL 680
NAY+ C PP+R K R P+ +IR L+ L K S++ ++ LRKL W+D E LL
Sbjct: 673 NAYFQCNPPDRPVIEPKHRTPMELFIRYQLYDCLSKKSVDRTIKLLRKLHWNDPEVVKLL 732
Query: 681 KCFM-KVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRL 739
K + KV K K+G I+L+A + LSR+H +F V++VD+VLE IR +E+N + Q+R+
Sbjct: 733 KNILTKVWKIKFGNIYLLAIIVYDLSRFHADFTVSIVDQVLENIRHSMEINIFKHNQQRI 792
Query: 740 AHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
A +++LGELYNY +DS VIFDTL+ + FGH
Sbjct: 793 ATIKYLGELYNYRVIDSRVIFDTLWSFVTFGH 824
>gi|67541050|ref|XP_664299.1| hypothetical protein AN6695.2 [Aspergillus nidulans FGSC A4]
gi|40739323|gb|EAA58513.1| hypothetical protein AN6695.2 [Aspergillus nidulans FGSC A4]
gi|259480279|tpe|CBF71264.1| TPA: nonsense-mediated mRNA decay factor (Upf2), putative
(AFU_orthologue; AFUA_7G05430) [Aspergillus nidulans
FGSC A4]
Length = 1170
Score = 358 bits (919), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 208/594 (35%), Positives = 314/594 (52%), Gaps = 85/594 (14%)
Query: 194 FKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYR 253
FK + Y V+ + + +L NA+ GE+ E+ +++E+ KS + L
Sbjct: 315 FKSILNRYLEDVKAHVMRDQKALTAQSRRNAEAYVKSGEIFEDRQANFERQTKSLEKLVA 374
Query: 254 NVSSLAEALDMQPPVMPED-------------VHTTRVTSGEDASPASGKDSSVPEPVWD 300
N L E L ++ P + V T+ G+ P +W+
Sbjct: 375 NTQVLCEILGVEMPALATQEASDPAASGGIGLVKTSEYLRGQGEGPG----------IWE 424
Query: 301 DEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTAE 360
DEE R FYE L DL+ VPAVLL + +
Sbjct: 425 DEEERRFYENLVDLKGKVPAVLLDDGKK-------------------------------- 452
Query: 361 VSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEK 420
K E G+ ++KE E G + EK +P + +E+
Sbjct: 453 -----------KKTETGEPTKKKESEA----------GHESSEK-----TEPQSQISEER 486
Query: 421 DTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRAL 480
TE ++ K V G +DALL +LP +++ +DQ+ ++FC+LNSK++R RLV+A+
Sbjct: 487 TTEADDQSMAIASKTV-GAQVDALLAKLPELQTKEQVDQMALDFCFLNSKASRNRLVKAI 545
Query: 481 FNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNI-ETKIRNI 539
++P+ ++LLP YSR+VATL M D+ L L+EEF L +K + + + ++ NI
Sbjct: 546 SDIPKGRIDLLPLYSRLVATLGQYMPDIPQGLTTYLDEEFRSLQRRKSKEFLGQVRMSNI 605
Query: 540 RFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANM 599
R++ EL KF + P ++F C K LDDF+ NI++ +LLE CGR+L R+P+TS RMA+
Sbjct: 606 RYLAELTKFGVVPEHIIFHCFKVSLDDFSRMNIEIIGHLLENCGRYLLRNPDTSPRMASF 665
Query: 600 LEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSS 659
LE L R K V++L P+ ++ENA Y PP+R A K R P+ YIRKL++ D++K +
Sbjct: 666 LETLGRKKTVQHLGPQERMIIENAVYYVDPPQRPAIQQKERTPMESYIRKLIYLDMNKRN 725
Query: 660 IEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVD 717
+L+ +RKL W + E L + F K K KYG IHL+A L + L RYH F + +VD
Sbjct: 726 YTKILKSVRKLHWEEPEVVHILERVFSKPAKVKYGNIHLLAILVSALYRYHQGFVIGIVD 785
Query: 718 EVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
+LE I LGLE ND+ Q+R+A +++LGELYNY+ +DS VIFDTLY I+ +GH
Sbjct: 786 NILEYITLGLEQNDFKFNQKRIAEVKYLGELYNYKMIDSPVIFDTLYRIVTYGH 839
>gi|315050928|ref|XP_003174838.1| nonsense-mediated mRNA decay protein 2 [Arthroderma gypseum CBS
118893]
gi|311340153|gb|EFQ99355.1| nonsense-mediated mRNA decay protein 2 [Arthroderma gypseum CBS
118893]
Length = 1181
Score = 358 bits (918), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 210/584 (35%), Positives = 309/584 (52%), Gaps = 61/584 (10%)
Query: 194 FKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYR 253
FK + Y V++ + + +L NA+ GE+ E+ S++EK K+++ L
Sbjct: 300 FKNVLNRYLEDVKKHVSRDQKALANQSRRNAEAYVKSGEILEDRQSNFEKQTKAHEKLVS 359
Query: 254 NVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASG---KDSSVPEPVWDDEETRAFYEC 310
N SL E L + P + E + TSG +G + +W+DEE R FYE
Sbjct: 360 NTQSLCEILGSEMPDLAEKDASDGATSGSIGLVKTGEYLRGQGEGAGIWEDEEERRFYEN 419
Query: 311 LPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTAEVSADLGASPE 370
L D + VPAVLL + + K AD P+
Sbjct: 420 LADFKGKVPAVLLEDGKKK--------------------------------KADGDDQPK 447
Query: 371 GKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEKDTERKVETEK 430
GKS +G++ G G E PD + E +
Sbjct: 448 GKSDSEGQN----------------GTGA------PEGTSKPDSQPADSNPREPEEPATA 485
Query: 431 EKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLEL 490
K V G +DALL +LP +++ +DQL ++FC+LNSK++R RLV+A+ VP+ +L
Sbjct: 486 IANKSV-GAQVDALLSKLPDLANKEAVDQLALDFCFLNSKASRNRLVKAVQEVPKGRSDL 544
Query: 491 LPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNI-ETKIRNIRFIGELCKFK 549
LP Y+R+VATL + DV LI L++EF L +K + + + + NIR++ EL KF
Sbjct: 545 LPLYARLVATLGQYLPDVPQGLITYLDDEFRSLQRRKQKEFLGQVRTSNIRYLAELTKFG 604
Query: 550 IAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNV 609
+ P ++F C K LD+F+ NI++ NLLE CGR+L R+PET+ RMA+ LE L R K+
Sbjct: 605 VVPEHVIFHCFKVSLDEFSRMNIEIIGNLLENCGRYLLRNPETAPRMASFLETLGRKKSA 664
Query: 610 KNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRK 669
++L + ++ENA Y PP+R A K R P+ YIRKLL+ D++K + +L+ +RK
Sbjct: 665 QHLGQQERMIIENAMYYVDPPQRPAIQQKERTPMELYIRKLLYLDMNKRNYTKILKAIRK 724
Query: 670 LPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGL 727
L W + E L F K K KYG IHL+A + + L RYH F + V+D VLE I +GL
Sbjct: 725 LHWEEPEVVDILEGIFSKPGKIKYGNIHLLAIIVSALYRYHQAFVIGVIDNVLERITVGL 784
Query: 728 ELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
E ND+ Q R++ +++LGELYNY+ VDS VIFDTLY I+ +GH
Sbjct: 785 ENNDFKFNQARISEVKYLGELYNYKMVDSPVIFDTLYRIVTYGH 828
>gi|303315085|ref|XP_003067550.1| MIF4G domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|240107220|gb|EER25405.1| MIF4G domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
Length = 1155
Score = 357 bits (916), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 210/584 (35%), Positives = 310/584 (53%), Gaps = 63/584 (10%)
Query: 194 FKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYR 253
F+ Y + V++ + +H +L + NA+ GE+ E+ S++EK K+ + L
Sbjct: 303 FRNIMIKYLDDVKKHVVRDHKALAALSRRNAEAYVKSGEILEDRQSNFEKQSKAQEKLVS 362
Query: 254 NVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASG---KDSSVPEPVWDDEETRAFYEC 310
N L + L + P + E ++SG +G + +W+DEE R FYE
Sbjct: 363 NTQILCDILGSEMPELAEKEGLDSLSSGTIGLVKTGEYLRGQGEGPGIWEDEEERRFYEN 422
Query: 311 LPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTAEVSADLGASPE 370
L DL+ VPAVLL
Sbjct: 423 LVDLKGKVPAVLL----------------------------------------------- 435
Query: 371 GKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEKDTERKVETEK 430
E GK K+ + E+AK+ D + G E+K +E+ P + +E D + K
Sbjct: 436 ----EDGKKKKGEADEQAKNKDADLPNGVTSEDK-RERPGQPVESTPRETDDQSTAIVNK 490
Query: 431 EKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLEL 490
G +D LL RLP +D +DQL +EFC+LNSK++R RL++A+ +VP+ +L
Sbjct: 491 -----TVGAQVDTLLARLPELQHKDAVDQLALEFCFLNSKASRNRLIKAMQDVPKGRTDL 545
Query: 491 LPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNI-ETKIRNIRFIGELCKFK 549
LP Y+R+VATL + D+ LI L+EEF L +K + + + + NIR++ EL KF
Sbjct: 546 LPLYARLVATLGQYLPDIPQGLISYLDEEFRSLQRRKQKEFLGQVRTSNIRYLAELTKFG 605
Query: 550 IAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNV 609
+ P ++F C K LDDF+ NI++ NLLE CGR+L R+PET+ RMA+ LE L R K
Sbjct: 606 VVPEHVIFHCFKVSLDDFSRMNIEIIGNLLENCGRYLLRNPETAPRMASFLETLGRKKAA 665
Query: 610 KNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRK 669
++L + ++ENA Y PP R A K R P+ ++RKL++ D++K + +L+ +RK
Sbjct: 666 QHLGQQERMVLENAMYYVDPPPRPAIQQKERTPMELFVRKLVYLDMNKRNYPKILKSVRK 725
Query: 670 LPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGL 727
L W + E L F K K KYG IHL+A L + L RYH +F V ++D LE I +GL
Sbjct: 726 LHWEEPEVVRILESVFSKPAKVKYGNIHLLALLVSALYRYHQDFVVNIIDNSLERITIGL 785
Query: 728 ELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
E ND+ Q RLA +++LGELYNY+ VDS VIFDTLY I+ FGH
Sbjct: 786 EQNDFKFNQERLADVKYLGELYNYKMVDSPVIFDTLYRIVTFGH 829
>gi|392868686|gb|EAS34476.2| nonsense-mediated mRNA decay factor [Coccidioides immitis RS]
Length = 1155
Score = 356 bits (914), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 209/584 (35%), Positives = 310/584 (53%), Gaps = 63/584 (10%)
Query: 194 FKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYR 253
F+ Y + V++ + +H +L + NA+ GE+ E+ S++EK K+ + L
Sbjct: 303 FRNIMIKYLDDVKKHVVRDHKALAALSRRNAEAYVKSGEILEDRQSNFEKQSKAQEKLVS 362
Query: 254 NVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASG---KDSSVPEPVWDDEETRAFYEC 310
N L + L + P + E ++SG +G + +W+DEE R FYE
Sbjct: 363 NTQILCDILGSEMPELAEKEGLDSLSSGTIGLVKTGEYLRGQGEGPGIWEDEEERRFYEN 422
Query: 311 LPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTAEVSADLGASPE 370
L DL+ VPAVLL
Sbjct: 423 LVDLKGKVPAVLL----------------------------------------------- 435
Query: 371 GKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEKDTERKVETEK 430
E GK K+ + E+AK+ D + G E+K +E+ P + +E D + K
Sbjct: 436 ----EDGKKKKGEADEQAKNKDADLPNGVTSEDK-RERPGQPVESTPRETDDQSTAIVNK 490
Query: 431 EKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLEL 490
G +D LL RLP +D +DQL +EFC+LNSK++R RL++A+ +VP+ +L
Sbjct: 491 -----TVGAQVDTLLARLPELQHKDAVDQLALEFCFLNSKASRNRLIKAMQDVPKGRTDL 545
Query: 491 LPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNI-ETKIRNIRFIGELCKFK 549
LP Y+R+VATL + D+ LI L+EEF L +K + + + + NIR++ EL KF
Sbjct: 546 LPLYARLVATLGQYLPDIPQGLISYLDEEFRSLQRRKQKEFLGQVRTSNIRYLAELTKFG 605
Query: 550 IAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNV 609
+ P ++F C K LDDF+ NI++ NLLE CGR+L R+PET+ RMA+ LE L R K
Sbjct: 606 VVPEHVIFHCFKVSLDDFSRMNIEIIGNLLENCGRYLLRNPETAPRMASFLETLGRKKAA 665
Query: 610 KNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRK 669
++L + ++ENA Y PP R A K R P+ ++RKL++ D++K + +L+ +RK
Sbjct: 666 QHLGQQERMVLENAMYYVDPPPRPAIQQKERTPMELFVRKLVYLDMNKRNYPKILKSVRK 725
Query: 670 LPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGL 727
L W + E L F K K KYG IHL+A L + L RYH +F V ++D LE I +GL
Sbjct: 726 LHWEEPEVVRILESVFSKPAKVKYGNIHLLALLVSALYRYHQDFVVNIIDNSLERITIGL 785
Query: 728 ELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
E ND+ Q R+A +++LGELYNY+ VDS VIFDTLY I+ FGH
Sbjct: 786 EQNDFKFNQERIADVKYLGELYNYKMVDSPVIFDTLYRIVTFGH 829
>gi|320035690|gb|EFW17631.1| nonsense-mediated mRNA decay factor [Coccidioides posadasii str.
Silveira]
Length = 1155
Score = 356 bits (913), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 209/584 (35%), Positives = 310/584 (53%), Gaps = 63/584 (10%)
Query: 194 FKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYR 253
F+ Y + V++ + +H +L + NA+ GE+ E+ S++EK K+ + L
Sbjct: 303 FRNIMIKYLDDVKKHVVRDHKALAALSRRNAEAYVKSGEILEDRQSNFEKQSKAQEKLVS 362
Query: 254 NVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASG---KDSSVPEPVWDDEETRAFYEC 310
N L + L + P + E ++SG +G + +W+DEE R FYE
Sbjct: 363 NTQILCDILGSEMPELAEKEGLDSLSSGTIGLVKTGEYLRGQGEGPGIWEDEEERRFYEN 422
Query: 311 LPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTAEVSADLGASPE 370
L DL+ VPAVLL
Sbjct: 423 LVDLKGKVPAVLL----------------------------------------------- 435
Query: 371 GKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEKDTERKVETEK 430
E GK K+ + E+AK+ D + G E+K +E+ P + +E D + K
Sbjct: 436 ----EDGKKKKGEADEQAKNKDADLPNGVTSEDK-RERPGQPVESTPRETDDQSTAIVNK 490
Query: 431 EKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLEL 490
G +D LL RLP +D +DQL +EFC+LNSK++R RL++A+ +VP+ +L
Sbjct: 491 -----TVGAQVDTLLARLPELQHKDAVDQLALEFCFLNSKASRNRLIKAMQDVPKGRTDL 545
Query: 491 LPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNI-ETKIRNIRFIGELCKFK 549
LP Y+R+VATL + D+ LI L+EEF L +K + + + + NIR++ EL KF
Sbjct: 546 LPLYARLVATLGQYLPDIPQGLISYLDEEFRSLQRRKQKEFLGQVRTSNIRYLAELTKFG 605
Query: 550 IAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNV 609
+ P ++F C K LDDF+ NI++ NLLE CGR+L R+PET+ RMA+ LE L R K
Sbjct: 606 VVPEHVIFHCFKVSLDDFSRMNIEIIGNLLENCGRYLLRNPETAPRMASFLETLGRKKAA 665
Query: 610 KNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRK 669
++L + ++ENA Y PP R A K R P+ ++RKL++ D++K + +L+ +RK
Sbjct: 666 QHLGQQERMVLENAMYYVDPPPRPAIQQKERTPMELFVRKLVYLDMNKRNYPKILKSVRK 725
Query: 670 LPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGL 727
L W + E L F K K KYG IHL+A L + L RYH +F V ++D LE I +GL
Sbjct: 726 LHWEEPEVVRILESVFSKPAKVKYGNIHLLALLVSALYRYHQDFVVNIIDNSLERITIGL 785
Query: 728 ELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
E ND+ Q R+A +++LGELYNY+ VDS VIFDTLY I+ FGH
Sbjct: 786 EQNDFKFNQERIADVKYLGELYNYKMVDSPVIFDTLYRIVTFGH 829
>gi|326485086|gb|EGE09096.1| nonsense-mediated mRNA decay protein 2 [Trichophyton equinum CBS
127.97]
Length = 1162
Score = 356 bits (913), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 207/584 (35%), Positives = 312/584 (53%), Gaps = 61/584 (10%)
Query: 194 FKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYR 253
FK + Y V++ + + +L NA+ GE+ E+ S++EK K+++ L
Sbjct: 287 FKNVLNRYLEDVKKHVSRDQKALANQSRRNAEAYVKSGEILEDRQSNFEKQTKAHEKLVS 346
Query: 254 NVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASG---KDSSVPEPVWDDEETRAFYEC 310
N SL E L ++ P + E + SG +G + +W+DEE R FYE
Sbjct: 347 NTQSLCEILGVEMPDLAEKDASDGAMSGSIGLVKTGEYLRGQGEGAGIWEDEEERRFYEN 406
Query: 311 LPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTAEVSADLGASPE 370
L D + VPAVLL + + K A DQ ++ + A+PE
Sbjct: 407 LADFKGKVPAVLLEDGKKKK--------------ADGDDQSKVKPDAEGQNGT---AAPE 449
Query: 371 GKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEKDTERKVETEK 430
G S PD + A++P+ E+
Sbjct: 450 GTS----------------KPDSQAADSS---------AREPE-------------ESAT 471
Query: 431 EKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLEL 490
G +DALL +LP ++D +DQL ++FC+LNSK++R RLV+A+ VP+ +L
Sbjct: 472 TIANKSVGAQVDALLSKLPELANKDAVDQLALDFCFLNSKASRNRLVKAVQEVPKGRSDL 531
Query: 491 LPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNI-ETKIRNIRFIGELCKFK 549
LP Y+R+VATL + DV LI L++EF L +K + + + + NIR++ EL KF
Sbjct: 532 LPLYARLVATLGQYLPDVPQGLITYLDDEFRSLQRRKQKEFLGQVRTSNIRYLAELTKFG 591
Query: 550 IAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNV 609
+ P ++F C K LD+F+ NI++ NLLE CGR+L R+PET+ RMA+ LE L R K+
Sbjct: 592 VVPEHVIFHCFKVSLDEFSRMNIEIIGNLLENCGRYLLRNPETAPRMASFLETLGRKKSA 651
Query: 610 KNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRK 669
++L + ++ENA Y PP+R A K R P+ YIRKL++ D++K + +L+ +RK
Sbjct: 652 QHLGQQERMIIENAMYYVDPPQRPAIQQKERTPMELYIRKLIYLDMNKRNYTKILKAIRK 711
Query: 670 LPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGL 727
L W + E + L + F K K KYG IHL+A + + L RYH F + V+D VLE I +GL
Sbjct: 712 LHWEEPEVVNILERIFSKPGKIKYGNIHLLAIIISALYRYHQSFVIGVIDNVLERITIGL 771
Query: 728 ELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
E ND+ Q R++ +++LGELYNY+ VDS VIFDTLY I+ +GH
Sbjct: 772 ENNDFKFNQSRISEVKYLGELYNYKMVDSPVIFDTLYRIVTYGH 815
>gi|358369517|dbj|GAA86131.1| nonsense-mediated mRNA decay factor [Aspergillus kawachii IFO 4308]
Length = 1133
Score = 355 bits (912), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 210/588 (35%), Positives = 310/588 (52%), Gaps = 74/588 (12%)
Query: 194 FKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYR 253
FK + Y V+ + + +L NA+ GE+ E+ +++EK KS + L
Sbjct: 280 FKHILNRYLEDVKTHVVRDQRALAAQSRRNAEAYVKSGEIFEDRQANFEKQTKSLEKLVT 339
Query: 254 NVSSLAEALDMQPPVMPED-------VHTTRVTSGEDASPASGKDSSVPEPVWDDEETRA 306
N L E L ++ P + E + + G+ + + W+DEE R
Sbjct: 340 NTQVLCEVLGVEMPALAEKEAADAGAGGGIGLVKASEYLRGQGEGAGI----WEDEEERR 395
Query: 307 FYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTAEVSADLG 366
FYE L DL+ VPAVLL + + K E
Sbjct: 396 FYENLVDLKGKVPAVLLEDGKKKKAED--------------------------------- 422
Query: 367 ASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEKDTERKV 426
E GK KEE E K E G+ + EEK A
Sbjct: 423 --------EAGKKKEEDGTETEK---TEAGQAQSAEEKAAADA---------------DD 456
Query: 427 ETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRT 486
++ K V G +DALL +LP ++D +DQL ++FC+LNSK++R RL++A+ +VP+
Sbjct: 457 QSTAIASKTV-GAQVDALLAKLPDLQTKDQVDQLALDFCFLNSKASRNRLIKAVSDVPKG 515
Query: 487 SLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNI-ETKIRNIRFIGEL 545
++LLP YSR+VATL M D+ + L+EEF L +K + + + ++ N+R++ EL
Sbjct: 516 RIDLLPLYSRLVATLGQYMPDIPQGITNYLDEEFRSLQRRKSKEFLGQVRMSNVRYLAEL 575
Query: 546 CKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMR 605
KF + P ++F C K LDDF+ NI++ +LLE CGR+L R+P+TS RMA+ LE L R
Sbjct: 576 TKFGVVPEHIIFHCFKVSLDDFSRMNIEIIGHLLENCGRYLLRNPDTSPRMASFLETLGR 635
Query: 606 LKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLR 665
K V++L + ++ENA Y PP R A K R P+ YIR+L++ D++K + +L+
Sbjct: 636 KKTVQHLGQQERMIIENAVYYVDPPPRPAIQQKERTPMESYIRRLVYLDMNKRNYTKILK 695
Query: 666 QLRKLPW--SDCESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEI 723
+RKL W D L + F K K KYG IHL+A L + L RYH +F + VVD +LE+I
Sbjct: 696 SIRKLHWEEQDVVDILERVFSKPVKVKYGNIHLLAILVSALYRYHQDFVIGVVDNILEQI 755
Query: 724 RLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
LGLE ND+ Q+R+A +++LGELYNY+ +DS VIFDTLY I+ FGH
Sbjct: 756 TLGLEQNDFKFNQKRIAEVKYLGELYNYKMIDSPVIFDTLYRIITFGH 803
>gi|225563299|gb|EEH11578.1| nonsense-mediated mRNA decay protein [Ajellomyces capsulatus
G186AR]
Length = 1179
Score = 355 bits (910), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 210/586 (35%), Positives = 315/586 (53%), Gaps = 59/586 (10%)
Query: 194 FKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYR 253
F+ + Y V+ + ++ L +NA+ GE+ E+ S++EK K+++ L
Sbjct: 293 FRNILNRYLEDVKAHVVSDQKGLATQSRKNAEAYVKSGEIFEDRQSNFEKQSKAHEKLVS 352
Query: 254 NVSSLAEAL--DMQPPVMPEDVHTTRVTSGEDASPASG---KDSSVPEPVWDDEETRAFY 308
N +L E L DM P +M ++ + + G +G + +W+DEE R FY
Sbjct: 353 NTQALCEILGSDM-PDLMEKETGDSTLGGGSIGLVKTGEYLRGQGEGPGIWEDEEERRFY 411
Query: 309 ECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTAEVSADLGAS 368
E L DL+ VPAVLL + + K KP
Sbjct: 412 ENLVDLKGKVPAVLLEDGKKK------KP------------------------------- 434
Query: 369 PEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEKDTERKVET 428
D +++ K+KA D E G ++ K A P + +T+ +
Sbjct: 435 ----------DGDDQVKKKA---DGEATNGVPADQLGKGDATKPALTASEAANTQEVDDQ 481
Query: 429 EKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSL 488
+ G +DALL +LP ++D +DQL +EFC+LNSK++R RLV+A+ P+
Sbjct: 482 SASMVNKTVGAQVDALLAKLPELQTKDSVDQLALEFCFLNSKASRNRLVKAIQEAPKGRT 541
Query: 489 ELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNI-ETKIRNIRFIGELCK 547
+LLP Y+R+VATL + D+ LI L+EEF L ++ + + + + NIR++ EL K
Sbjct: 542 DLLPLYARLVATLGQYLPDIPQGLISYLDEEFRSLQRRRQKEFLGQVRTSNIRYLAELTK 601
Query: 548 FKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLK 607
F + P ++F C K LDDF+ NI++ NLLE CGR+L R+PETS RMA+ LE L R K
Sbjct: 602 FGVVPEHVIFHCFKVSLDDFSRMNIEIIGNLLENCGRYLLRNPETSPRMASFLETLGRKK 661
Query: 608 NVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQL 667
++L + ++ENA Y PP+R A K R P+ YIRKLL+ D++K + +L+ +
Sbjct: 662 AAQHLGQQERMIIENAMYYVDPPQRPAIQQKERTPMELYIRKLLYLDMNKRNYPRILKCI 721
Query: 668 RKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRL 725
RKL W + E L + F K K KY IH++A L + L RYH +F + +VD +LE I L
Sbjct: 722 RKLHWEEQEVVHILERIFSKPGKVKYSNIHILAILVSALYRYHQDFVIGIVDNILENITL 781
Query: 726 GLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
GLE ND+ QRR+A +++LGELYNY+ VDS +IFDTLY I+ FGH
Sbjct: 782 GLEQNDFKFNQRRIAEVKYLGELYNYKIVDSPLIFDTLYRIVTFGH 827
>gi|121711527|ref|XP_001273379.1| nonsense-mediated mRNA decay factor (Upf2), putative [Aspergillus
clavatus NRRL 1]
gi|119401530|gb|EAW11953.1| nonsense-mediated mRNA decay factor (Upf2), putative [Aspergillus
clavatus NRRL 1]
Length = 1195
Score = 355 bits (910), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 211/587 (35%), Positives = 311/587 (52%), Gaps = 66/587 (11%)
Query: 194 FKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYR 253
FK Y V+ + + +L NA+ GE+ E+ +++EK KS + L
Sbjct: 338 FKSIMSRYLEDVKAHVVRDQRALAAQSRRNAEAYVKSGEIFEDRQANFEKQSKSLEKLVA 397
Query: 254 NVSSLAEALDMQPPVMPEDVHTTRVTSG-----EDASPASGKDSSVPEPVWDDEETRAFY 308
N L E L + P + E +SG + A G+ W+DEE R FY
Sbjct: 398 NTLVLCEVLGVDMPALAEQESADAASSGGIGLVKTAEYLRGQGEG--SGFWEDEEERRFY 455
Query: 309 ECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTAEVSADLGAS 368
E L DL+ VPAVLL
Sbjct: 456 ENLVDLKGKVPAVLL--------------------------------------------- 470
Query: 369 PEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKE-KGKEKDTERKVE 427
E GK K+K +A + K+K +G+ E EKA+ ++ G+EK T +
Sbjct: 471 ------EDGK----KKKPEADETAKKKAEGEATPESTTEKAEVTNQTPSGEEKVTAETDD 520
Query: 428 TEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTS 487
G +DALL +LP ++D +DQL ++FC+LNSK++R RL++A+ +VP+
Sbjct: 521 QSTAIASKTVGAQVDALLAKLPDLQTKDQVDQLALDFCFLNSKASRNRLIKAVSDVPKGR 580
Query: 488 LELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNI-ETKIRNIRFIGELC 546
++LLP YSR+VATL + D+ LI L+EEF L +K + + + ++ NIR++ EL
Sbjct: 581 IDLLPLYSRLVATLGQYLPDIPQGLITYLDEEFRSLQRRKSKEFLGQVRMTNIRYLAELT 640
Query: 547 KFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRL 606
KF P ++F C K LDDF+ NI++ +LLE CGR+L R+PETS RM + LE L R
Sbjct: 641 KFGTVPEHIIFHCFKVSLDDFSRMNIEIIGHLLENCGRYLLRNPETSPRMTSFLERLNRK 700
Query: 607 KNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQ 666
K +++L + ++ENA Y PP R A K R P+ YIRK+++ D++K + +L+
Sbjct: 701 KTIQHLGQQERMIIENAVYYVDPPPRPAIQQKERTPMESYIRKIIYLDMNKRNYTKILKS 760
Query: 667 LRKLPW--SDCESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIR 724
+RKL W D L + F K K KYG IHL+A L + L RYH F + +VD +LE+I
Sbjct: 761 IRKLHWEEQDVVDILERVFSKPVKVKYGNIHLLAILVSALYRYHQNFVINIVDNILEQIT 820
Query: 725 LGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
LGLE ND+ Q+R+A +++LGELYNY+ +DS VIFDTLY I+ FG+
Sbjct: 821 LGLEQNDFKFNQKRVAEVKYLGELYNYKMIDSPVIFDTLYRIVTFGY 867
>gi|240275887|gb|EER39400.1| nonsense-mediated mRNA decay protein [Ajellomyces capsulatus H143]
gi|325093251|gb|EGC46561.1| nonsense-mediated mRNA decay protein [Ajellomyces capsulatus H88]
Length = 1170
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 206/586 (35%), Positives = 312/586 (53%), Gaps = 59/586 (10%)
Query: 194 FKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYR 253
F+ + Y V+ L+ ++ L +NA+ GE+ E+ +++EK K+++ L
Sbjct: 293 FRNILNRYLEDVKALVVSDQKGLATQSRKNAEAYVKSGEIFEDRQANFEKQSKAHEKLVS 352
Query: 254 NVSSLAEAL--DMQPPVMPEDVHTTRVTSGEDASPASG---KDSSVPEPVWDDEETRAFY 308
N +L E L DM P +M ++ + + G +G + +W+DEE R FY
Sbjct: 353 NTQALCEILGSDM-PDLMEKETGDSTLGGGSIGLVKTGEYLRGQGEGPGIWEDEEERRFY 411
Query: 309 ECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTAEVSADLGAS 368
E L DL+ VPAVLL + + K
Sbjct: 412 ENLVDLKGKVPAVLLEDGKKKK-------------------------------------- 433
Query: 369 PEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEKDTERKVET 428
D +++ K KA D E G ++ K P + +T+ +
Sbjct: 434 ---------ADGDDQVKRKA---DGEAANGVPADQFGKGDVTKPGLTASEAANTQEVDDQ 481
Query: 429 EKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSL 488
+ G +DALL +LP ++D +DQL +EFC+LNSK++R RLV+A+ P+
Sbjct: 482 SASMVNKTVGAQVDALLAKLPELQTKDSVDQLALEFCFLNSKASRNRLVKAIQEAPKGRT 541
Query: 489 ELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNI-ETKIRNIRFIGELCK 547
+LLP Y+R+VATL + D+ LI L+EEF L ++ + + + + NIR++ EL K
Sbjct: 542 DLLPLYARLVATLGQYLPDIPQGLISYLDEEFRSLQRRRQKEFLGQVRTSNIRYLAELTK 601
Query: 548 FKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLK 607
F + P ++F C K LDDF+ NI++ NLLE CGR+L R+PETS RMA+ LE L R K
Sbjct: 602 FGVVPEHVIFHCFKVSLDDFSRMNIEIIGNLLENCGRYLLRNPETSPRMASFLETLGRKK 661
Query: 608 NVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQL 667
++L + ++ENA Y PP+R A K R P+ YIRKLL+ D++K + +L+ +
Sbjct: 662 AAQHLGQQERMIIENAMYYVDPPQRPAIQQKERTPMELYIRKLLYLDMNKRNYPRILKCI 721
Query: 668 RKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRL 725
RKL W + E L + F K K +Y IH++A L + L RYH +F + +VD +LE I L
Sbjct: 722 RKLHWEEQEVVHILERIFSKPGKVRYSNIHILAILVSALYRYHQDFVIGIVDNILENITL 781
Query: 726 GLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
GLE ND+ QRR+A +++LGELYNY+ VDS +IFDTLY I+ FGH
Sbjct: 782 GLEQNDFKFNQRRIAEVKYLGELYNYKIVDSPLIFDTLYRIVTFGH 827
>gi|154281855|ref|XP_001541740.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150411919|gb|EDN07307.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 1155
Score = 353 bits (905), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 209/586 (35%), Positives = 314/586 (53%), Gaps = 59/586 (10%)
Query: 194 FKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYR 253
F+ + Y V+ + ++ L +NA+ GE+ E+ S++EK K+++
Sbjct: 308 FRNILNRYLEDVKTHVVSDQKGLATQSRKNAEAYVKSGEIFEDRQSNFEKQSKAHEKFVS 367
Query: 254 NVSSLAEAL--DMQPPVMPEDVHTTRVTSGEDASPASG---KDSSVPEPVWDDEETRAFY 308
N +L E L DM P +M ++ + + G +G + +W+DEE R FY
Sbjct: 368 NTQALCEILGSDM-PDLMEKETGDSTLGGGSIGLVKTGEYLRGQGEGPGIWEDEEERRFY 426
Query: 309 ECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTAEVSADLGAS 368
E L DL+ VPAVLL + + K KP
Sbjct: 427 ENLVDLKGKVPAVLLEDGKKK------KP------------------------------- 449
Query: 369 PEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEKDTERKVET 428
D +++ K+KA D E G ++ K A P + +T+ +
Sbjct: 450 ----------DGDDQVKKKA---DGEATNGVLADQFGKGDATKPGLSASEAANTQEVDDQ 496
Query: 429 EKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSL 488
+ G +D+LL +LP ++D +DQL +EFC+LNSK++R RLV+A+ P+
Sbjct: 497 SASMVNKTVGAQVDSLLAKLPELQTKDSVDQLALEFCFLNSKASRNRLVKAIQEAPKGRT 556
Query: 489 ELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNI-ETKIRNIRFIGELCK 547
+LLP Y+R+VATL + D+ LI L+EEF L +K + + + + NIR++ EL K
Sbjct: 557 DLLPLYARLVATLGQYLPDIPQGLISYLDEEFRSLQRRKQKEFLGQVRTSNIRYLAELTK 616
Query: 548 FKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLK 607
F + P ++F C K LDDF+ NI++ NLLE CGR+L R+PETS RMA+ LE L R K
Sbjct: 617 FGVVPEHVIFHCFKVSLDDFSRMNIEIIGNLLENCGRYLLRNPETSPRMASFLETLGRKK 676
Query: 608 NVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQL 667
++L + ++ENA Y PP+R A K R P+ YIRKLL+ D++K + +L+ +
Sbjct: 677 AAQHLGQQERMIIENAMYYVDPPQRPAIQQKERTPMELYIRKLLYLDMNKRNYPRILKCI 736
Query: 668 RKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRL 725
RKL W + E L + F K K KY IH++A L + L RYH +F + +VD +LE I L
Sbjct: 737 RKLHWEEQEVVHILERIFSKPGKVKYSNIHILAILVSALYRYHQDFVIGIVDNILENITL 796
Query: 726 GLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
GLE ND+ QRR+A +++LGELYNY+ VDS +IFDTLY I+ FGH
Sbjct: 797 GLEQNDFKFNQRRIAEVKYLGELYNYKIVDSPLIFDTLYRIVTFGH 842
>gi|453086884|gb|EMF14925.1| ARM repeat-containing protein [Mycosphaerella populorum SO2202]
Length = 1144
Score = 353 bits (905), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 206/586 (35%), Positives = 317/586 (54%), Gaps = 77/586 (13%)
Query: 194 FKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYR 253
F+ Y++ V+ + + L NA+ GE+ E+ +++EK +KS + L
Sbjct: 291 FRNILQRYFDDVKAHILRDQQRLTAQGKRNAEAYVKSGEVFEDRQTNHEKAQKSQEKLVS 350
Query: 254 NVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASG---KDSSVPEPVWDDEETRAFYEC 310
+ +LAE L + P + E + G +G + + +W+DE+ R FYE
Sbjct: 351 SAQTLAEVLGAEMPDLSEKDSSHAGLEGSIGLVKTGEYLRGQAEGAGIWEDEDERRFYEN 410
Query: 311 LPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTAEVSADLGASPE 370
L DL+ VP +LL +++ K A++ +V
Sbjct: 411 LVDLKDRVPGILLEDSKKKK------------------------AENDEQV--------- 437
Query: 371 GKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEKDTERKVETEK 430
GK VE+G D KEK G D E+
Sbjct: 438 GKKVEEGADA------------KEKPMGSD--------------------------ESST 459
Query: 431 EKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLEL 490
G +DALL RL ++D +DQL ++FC+LNSK++R RLV+A+ ++P+ +L
Sbjct: 460 AIANKTVGAQVDALLARLHELSTKDQVDQLAIDFCFLNSKASRNRLVKAIEDIPKGRTDL 519
Query: 491 LPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNI-ETKIRNIRFIGELCKFK 549
LP Y+R++A L ++DV +I+ L++EF L +K + + + ++ N+R+I EL KF
Sbjct: 520 LPLYARLIAILGRHLQDVPEAIIKYLDDEFRSLQRRKSKDFLGQVRMINMRYIAELTKFG 579
Query: 550 IAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNV 609
+ P ++F CLK CLDDF+ NI++ NLLE CGR+L R+PETS RMA+ LE L R K
Sbjct: 580 VVPEHVIFHCLKVCLDDFSRMNIEIIANLLENCGRYLLRNPETSPRMASFLETLQRKKTA 639
Query: 610 KNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRK 669
+++ + LVENA Y PPER+A K R L ++RKL+++DL K S++ V++Q+RK
Sbjct: 640 QHIGQQERMLVENAVYYVNPPERAAIQQKERTTLDLFVRKLVYTDLSKKSLDKVIKQIRK 699
Query: 670 LPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGL 727
L W + E L K F+K K ++G I L+A + A L R+H FA+ V+DE+LE + +GL
Sbjct: 700 LHWEESEVVDVLRKIFVKPGKIRFGNIFLLAMMLAALYRFHTGFAITVLDELLERVTVGL 759
Query: 728 ELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHGT 773
E+ND+ QRR+A ++LGELY Y VDS++IFDTLY IL +GH T
Sbjct: 760 EINDFKYNQRRIAEAKYLGELYMYRVVDSALIFDTLYKILNYGHAT 805
>gi|395328005|gb|EJF60400.1| transcription factor [Dichomitus squalens LYAD-421 SS1]
Length = 1149
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 246/756 (32%), Positives = 390/756 (51%), Gaps = 75/756 (9%)
Query: 61 LKICSLLHQRY-KDFSPCLIDGLLKVFFPGKSG-------EDLDADRNLKAMKKRSTLKL 112
++I S LH+R+ K F+P +I + P E + + + + ++R L++
Sbjct: 105 VEIISALHRRFPKTFTPGIISSVTTAIAPPSRALLATLTPEQREKEDSARVARQRPVLRV 164
Query: 113 LLELYFIGIIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGLPLSG 171
EL +GII D + ++ L D + ++L LL +F + R +LG+
Sbjct: 165 CAELALVGIIRDGPERSGGEWIMKAVRDLLSNDPSLSSLPLLLAFLKSYSRPYLGIVPPQ 224
Query: 172 PGQEIYEEFFKG-------------------LNITAD--QKKI---FKKAFHTYYNAVQE 207
++I G +N + + +K+I FKK Y++ V +
Sbjct: 225 ASKQISASSEPGTLSEAASEEAQTNGSSPTLINESEELVEKEIRDRFKKMCEGYFDNVAK 284
Query: 208 LLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPP 267
L EH L+ + +N + GE+ E+ +YEK+ KSY+ L + SL+E L + P
Sbjct: 285 KLVIEHNRLQDQDRKNHEAYIRSGEIFEDRQQAYEKMTKSYEKLIGSCQSLSEQLYLPMP 344
Query: 268 VMPEDVHTTR-----VTSGEDASPASGKDSSVPEPVWDDEETRAFYECLPDLRAFVPAVL 322
+ + + +G ++ S W+DEE R F+E +PDL+ +VP +
Sbjct: 345 TLKSASQKSESIQIGMNTGSSLLGGDSEELSSGGGKWEDEEERRFFEEIPDLKDYVPWSV 404
Query: 323 LGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTAEVSADLGASPEGKSVEKGKDKEE 382
LG + ++ E ++ Q + E A++ +G ++ GK ++E
Sbjct: 405 LGLEGDGDGDNEDGREKE----RKEKERVQEEVRRLEEELAEMKVGEDGTALPNGKAEKE 460
Query: 383 KEKEKAKD-PDKEKGKGKDKEEKDKEKAKDPDKEKGKEKDTERKVETEKEKLKGVEGTN- 440
E+E A D P G K+ + A +G +
Sbjct: 461 VEEEDADDVPTPTPGTPKESPSTTPQLAP--------------------------QGPSQ 494
Query: 441 -LDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVA 499
L ALL RLP +R LIDQ V+F +LNSK+ RKRL+R + +PR +LLP+YSR++A
Sbjct: 495 LLTALLARLPDATNRSLIDQAAVDFAFLNSKAARKRLIRFMSQIPRNRTDLLPHYSRLIA 554
Query: 500 TLSTCMKDVSSMLIQMLEEEFNFLINKKDQMN--IETKIRNIRFIGELCKFKIAPAGLVF 557
L+ M D+ + ++ L+EEF +L KK+ + +E ++RNI F+ L KF++ P ++
Sbjct: 555 ILNRYMPDIGTEIVASLDEEFRYLQRKKNVVKELVEVRMRNITFLSNLTKFRVVPPHVIL 614
Query: 558 SCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHV 617
K CLDDF+ N++ LLE CGRFL RS +T + M+E++ R +++++ D R +
Sbjct: 615 HMFKVCLDDFSGTNVENLAMLLEGCGRFLLRSEDTREPFSKMIELMRRKQSMQHFDQRQL 674
Query: 618 TLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDC-- 675
L+ENAYY C PPER+AR K R P+ +IR L++ L K +I+ VL+ LRKL W+D
Sbjct: 675 LLLENAYYQCNPPERAARQVKERTPMELFIRHLIYDVLAKKTIDKVLKLLRKLDWADAVV 734
Query: 676 ESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQ 735
+ L K F K K KY I L+A LT L RYH F++ VVD+VLE+IR GLE N Y M
Sbjct: 735 QRTLHKVFTKPWKIKYSHISLLAMLTYDLQRYHPAFSIGVVDQVLEDIRRGLESNLYNMN 794
Query: 736 QRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
QRR+A ++FLGELY Y + S +IFDTL+ ++ FGH
Sbjct: 795 QRRIASVKFLGELYIYRLISSGIIFDTLWTLVTFGH 830
>gi|326666390|ref|XP_697460.5| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts
2, partial [Danio rerio]
Length = 1089
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 171/343 (49%), Positives = 230/343 (67%), Gaps = 7/343 (2%)
Query: 441 LDALLQRLPGCVSRDLIDQLTVE-----FCYLNSKSNRKRLVRALFNVPRTSLELLPYYS 495
+DA +Q+LP C++RDLID++ + ++ RALF VPR L+LLP+Y+
Sbjct: 559 VDAFIQQLPNCINRDLIDKVNGQNTHKLKHTHTHTHTHTQIFRALFTVPRQRLDLLPFYA 618
Query: 496 RMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGL 555
R+VATL CM DV+ L ML+ +F F I KKDQ+NIETK + +RFIGEL KFK+
Sbjct: 619 RLVATLHPCMSDVAEDLCSMLKGDFRFHIRKKDQINIETKNKTVRFIGELAKFKMFSKTD 678
Query: 556 VFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPR 615
CLK L DF+HH+I++AC LLETCGRFL+RSP++ +R + +LE +MR K ++LD R
Sbjct: 679 TLHCLKVMLSDFSHHHIEMACTLLETCGRFLFRSPDSHLRTSVLLEQMMRKKQAQHLDVR 738
Query: 616 HVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDC 675
+VT+VENAYY C PP V + RPPL +YIRKLL+ DL K + E VLRQ+RKLPW D
Sbjct: 739 YVTMVENAYYYCNPPPMEKTVRRKRPPLQEYIRKLLYKDLSKVTTEKVLRQMRKLPWHDS 798
Query: 676 E--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYG 733
E YL+ C + + KY I +A+L AGL Y ++ + VVD VLE+IRLG+E+N
Sbjct: 799 EVKGYLICCMVNIWNVKYNSIXCVANLLAGLVAYQEDVGIHVVDGVLEDIRLGMEVNQPK 858
Query: 734 MQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHGTAET 776
QRR++ +FLGELYNY V+S+VIF TL+ + FG T T
Sbjct: 859 FNQRRISSAKFLGELYNYRMVESAVIFRTLFSFISFGVNTDGT 901
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 136/269 (50%), Gaps = 14/269 (5%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
+ +CSL HQRY +F+P L+ + F E ++ K R+ L+ + EL +G
Sbjct: 225 VHLCSLFHQRYAEFAPLLLAAWKRHF------EARKEEKTPNVSKLRTDLRFIAELTIVG 278
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGL---PLSGPGQEI 176
+ D I + L +I DR+T T+++++ SF + G GL + ++
Sbjct: 279 LFTDKEGLSLIYEQLKNI-IAADRET-HTHVSVIISFCKHCGDDIAGLVPRKVKNAAEKY 336
Query: 177 YEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEE 236
F I A++++ F+ Y+ ++ + L+ +H L+ +E +N +IL++KGELSE+
Sbjct: 337 SLSFPPSQIINAEKQQPFQNLLREYFTSLTKHLKKDHRELQNIERQNRRILHSKGELSED 396
Query: 237 NSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPED--VHTTRVTSGEDASPASGKDSSV 294
YE+ Y L N +LA+ LD P +P+D V + +P + +
Sbjct: 397 RHKQYEEFATQYQKLLANTQTLADLLDENMPELPQDKTVQEEHGPGIDIFTPGKPGEYDL 456
Query: 295 PEPVWDDEETRAFYECLPDLRAFVPAVLL 323
+W+DE+ R FYE + DL+AFVPA+L
Sbjct: 457 EGGIWEDEDARNFYENMVDLKAFVPAILF 485
>gi|226286740|gb|EEH42253.1| nonsense-mediated mRNA decay protein [Paracoccidioides brasiliensis
Pb18]
Length = 1178
Score = 350 bits (899), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 209/584 (35%), Positives = 310/584 (53%), Gaps = 57/584 (9%)
Query: 194 FKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYR 253
FK Y V+ + + +L +NA+ GE+ E+ S++EK K+++ L
Sbjct: 367 FKNILCRYLEDVKAHVIRDQKALATQSRKNAEAYVKSGEIFEDRQSNFEKQTKAHEKLVS 426
Query: 254 NVSSLAEALDMQ-PPVMPEDVHTTRVTSGEDASPASG--KDSSVPEPVWDDEETRAFYEC 310
N L E L + P +M ++ T + SG A + +W+DEE R FYE
Sbjct: 427 NTQVLCEILGVDMPDLMEKETVETALGSGIGLVKAGDYLRGHGEGPGIWEDEEERRFYEN 486
Query: 311 LPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTAEVSADLGASPE 370
L DL+ VPAVLL + + K + DQ + A +E+ D+G
Sbjct: 487 LVDLKGKVPAVLLEDGKKKKTDGD--------------DQAKKKAD--SELPNDVGVDHS 530
Query: 371 GKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEKDTERKVETEK 430
GK + PD + ++E + A
Sbjct: 531 GKG-------------EVTKPDNSSSEPANQEADSQSIAM-------------------- 557
Query: 431 EKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLEL 490
+ G LD LL +LP +++ +DQL ++FC+LNSK++R RLV+A+ P+ +L
Sbjct: 558 --VNKTVGAQLDMLLAKLPELQTKNSVDQLALDFCFLNSKASRNRLVKAIQEAPKGRTDL 615
Query: 491 LPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKK-DQMNIETKIRNIRFIGELCKFK 549
LP Y+R+VATL + D+ LI L+EEF L +K + + + NIR++ EL KF
Sbjct: 616 LPLYARLVATLGQYLPDIPQSLISYLDEEFRSLQRRKLKEFLGQVRTSNIRYLAELTKFG 675
Query: 550 IAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNV 609
+ P ++F C K LDDF+ NI++ NLLE CGR+L R+PET+ RMA+ LE L R K
Sbjct: 676 VVPEHVIFHCFKVSLDDFSRMNIEIIGNLLENCGRYLLRNPETAPRMASFLETLSRKKAA 735
Query: 610 KNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRK 669
++L + ++ENA Y PP+R A K R P+ QYIRKL+F D++K + +L+ +RK
Sbjct: 736 QHLGQQERMIIENAMYYVDPPQRPAIQQKERTPVEQYIRKLIFLDMNKRNCSKILKSIRK 795
Query: 670 LPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGL 727
L W + E L + F K K KYG IH++AS+ + L R H +F + +VD LE I LGL
Sbjct: 796 LHWEEQEVVQILERIFSKPGKVKYGNIHIMASIVSALYRCHQDFVIRIVDNTLEFITLGL 855
Query: 728 ELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
E ND+ QRR+A +++LGELYNY+ VDS VIFDTLY ++ FGH
Sbjct: 856 EQNDFKQNQRRVAEIKYLGELYNYKMVDSPVIFDTLYRLVTFGH 899
>gi|225684704|gb|EEH22988.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 1206
Score = 349 bits (895), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 209/584 (35%), Positives = 310/584 (53%), Gaps = 57/584 (9%)
Query: 194 FKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYR 253
FK Y V+ + + +L +NA+ GE+ E+ S++EK K+++ L
Sbjct: 389 FKNILCRYLEDVKAHVIRDQKALATQSRKNAEAYVKSGEIFEDRQSNFEKQTKAHEKLVS 448
Query: 254 NVSSLAEALDMQ-PPVMPEDVHTTRVTSGEDASPASG--KDSSVPEPVWDDEETRAFYEC 310
N L E L + P +M ++ T + SG A + +W+DEE R FYE
Sbjct: 449 NTQVLCEILGVDMPDLMEKETVETALGSGIGLVKAGEYLRGHGEGPGIWEDEEERRFYEN 508
Query: 311 LPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTAEVSADLGASPE 370
L DL+ VPAVLL + + K + DQ + A +E+ D+G
Sbjct: 509 LVDLKGKVPAVLLEDGKKKKTDGG--------------DQAKKKAD--SELPNDVGVDHS 552
Query: 371 GKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEKDTERKVETEK 430
GK + PD + ++E + A
Sbjct: 553 GKG-------------EVTKPDNSSSEPANQEADSQSIAM-------------------- 579
Query: 431 EKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLEL 490
+ G LD LL +LP +++ +DQL ++FC+LNSK++R RLV+A+ P+ +L
Sbjct: 580 --VNKTVGAQLDMLLAKLPELQTKNSVDQLALDFCFLNSKASRNRLVKAIQEAPKGRTDL 637
Query: 491 LPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKK-DQMNIETKIRNIRFIGELCKFK 549
LP Y+R+VATL + D+ LI L+EEF L +K + + + NIR++ EL KF
Sbjct: 638 LPLYARLVATLGQYLPDIPQSLISYLDEEFRSLQRRKLKEFLGQVRTSNIRYLAELTKFG 697
Query: 550 IAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNV 609
+ P ++F C K LDDF+ NI++ NLLE CGR+L R+PET+ RMA+ LE L R K
Sbjct: 698 VVPEHVIFHCFKVSLDDFSRMNIEIIGNLLENCGRYLLRNPETAPRMASFLETLSRKKAA 757
Query: 610 KNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRK 669
++L + ++ENA Y PP+R A K R P+ QYIRKL+F D++K + +L+ +RK
Sbjct: 758 QHLGQQERMIIENAMYYVDPPQRPAIQQKERTPVEQYIRKLIFLDMNKRNCSKILKSIRK 817
Query: 670 LPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGL 727
L W + E L + F K K KYG IH++AS+ + L R H +F + +VD LE I LGL
Sbjct: 818 LHWEEQEVVQILERIFSKPGKVKYGNIHIMASIVSALYRCHQDFVIRIVDNTLEFITLGL 877
Query: 728 ELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
E ND+ QRR+A +++LGELYNY+ VDS VIFDTLY ++ FGH
Sbjct: 878 EQNDFKQNQRRVAEIKYLGELYNYKMVDSPVIFDTLYRLVTFGH 921
>gi|307106618|gb|EFN54863.1| hypothetical protein CHLNCDRAFT_134932 [Chlorella variabilis]
Length = 918
Score = 349 bits (895), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 175/358 (48%), Positives = 234/358 (65%), Gaps = 5/358 (1%)
Query: 418 KEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLV 477
+E E +E + + E + LD LL RLPGCVS++L D+ V FCYL +K RKRLV
Sbjct: 234 QEPSYEETLEGKGAGEEAREPSQLDLLLGRLPGCVSKELADEAAVAFCYLQNKGARKRLV 293
Query: 478 RALFNVPRTSLELL-PYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQM--NIET 534
RAL L PYY+R+ ATL+ DV+ ++ LE EF L KD +E
Sbjct: 294 RALAAELPLGALALLPYYARIAATLAQVFPDVAQGVVAHLEAEFGTLQRSKDATARTLEP 353
Query: 535 KIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSI 594
++RN+R++ EL KF++ P G FS LK LDDF+ HNID AC ++ET GRF YR PETS
Sbjct: 354 RVRNMRYVAELAKFRLFPHGAAFSMLKQLLDDFSGHNIDAACAMVETAGRFFYRLPETST 413
Query: 595 RMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSD 654
RM+N LE++M+L+N +NLD R LV++AY+ K ++ AR + RPP H+YIR L++
Sbjct: 414 RMSNFLEVMMKLRNARNLDARQSGLVDSAYFAVKAADKGAR-RRQRPPQHEYIRHLVYER 472
Query: 655 LDKSSIEHVLRQLRKLPWSDCESYLLKCFMKV-HKGKYGQIHLIASLTAGLSRYHDEFAV 713
L + V+++LR+LPW+ E YLLK ++ HKG++ QI IASL AGLSRYH V
Sbjct: 473 LPLGQVTRVMKKLRRLPWAQYEGYLLKTLLRASHKGRFSQIPHIASLAAGLSRYHPSLGV 532
Query: 714 AVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
A+VDEVLE + GLE D G QRR+A +R LGELYNY+ V+S VIF TL+LIL +GH
Sbjct: 533 ALVDEVLEAVEAGLETPDAGFYQRRVAAVRLLGELYNYKLVNSQVIFATLHLILAYGH 590
>gi|390362179|ref|XP_003730090.1| PREDICTED: regulator of nonsense transcripts 2-like
[Strongylocentrotus purpuratus]
Length = 732
Score = 348 bits (894), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 165/313 (52%), Positives = 226/313 (72%), Gaps = 3/313 (0%)
Query: 461 TVEFCY-LNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEE 519
V+FC LN+KSNRK+L +ALFNVPR L+LLP+YSR+VATL CM D+++ L + L+ E
Sbjct: 22 AVDFCLNLNTKSNRKKLSKALFNVPRVRLDLLPFYSRLVATLYVCMPDIATDLAERLKGE 81
Query: 520 FNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLL 579
F + + KKDQM +E+KI+ RFIGEL KFK+ CLK + DF HHNID+AC LL
Sbjct: 82 FRWHVRKKDQMMVESKIKVSRFIGELTKFKMCSKADTLQCLKNLIQDFRHHNIDMACALL 141
Query: 580 ETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKV 639
E+CGRFLYRSP++ ++ +LE++MR K+ +L+ RH T++ENA++ C PPE KV
Sbjct: 142 ESCGRFLYRSPDSHLKTNALLELMMRKKSKMHLNERHSTMIENAFFYCNPPEVIKLERKV 201
Query: 640 RPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLI 697
RPP+H+YIRKLL+ DL K S+E VL+Q+RKLPW + + Y +KC V KY +H +
Sbjct: 202 RPPMHEYIRKLLYKDLSKVSVEKVLKQMRKLPWDNVQIKQYAVKCLSSVWNVKYNNLHCL 261
Query: 698 ASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSS 757
A+L AGL YHD+ + VVD +LE++R+G+E+N QRR++ ++FLGELYNY V+SS
Sbjct: 262 ANLLAGLVLYHDDAGIQVVDAILEDLRIGMEINYPKYNQRRVSILKFLGELYNYRMVESS 321
Query: 758 VIFDTLYLILVFG 770
VIF TLY +L FG
Sbjct: 322 VIFKTLYSLLRFG 334
>gi|321475803|gb|EFX86765.1| hypothetical protein DAPPUDRAFT_312843 [Daphnia pulex]
Length = 1159
Score = 348 bits (894), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 241/730 (33%), Positives = 367/730 (50%), Gaps = 80/730 (10%)
Query: 57 LVYFLKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNL-KAMKKRSTLKLLLE 115
+ L++C +LH++Y DF+P +++ KV L D + K R ++ +
Sbjct: 120 IASILQVCVVLHEKYVDFAPQILEAWQKVL-------SLKKDEKISNPSKMRVDVRFYAD 172
Query: 116 LYFIGIIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQGRIFLGLPLSGPGQE 175
L G++ + LT++ H D++ + +LA G + GL +S
Sbjct: 173 LISCGVLTPKEGLPLLGSFLTNLIH-GDKEEHNSATIILAFCKFCGEDYAGL-VSQKLLN 230
Query: 176 IYEEFFKGLNIT----ADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKG 231
E F + + AD+++ + YY ++ + L +H L+ E +N +IL KG
Sbjct: 231 DAERFKIAIPTSNWLPADKRQNVRNLLREYYTSLCKHLTQDHKELQNFERQNRRILQTKG 290
Query: 232 ELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVM-----PEDVHTTRVTSGEDASP 286
ELS E E L +S+ L A+ L + P + P D + + E+ S
Sbjct: 291 ELSNERKEKQEILNQSFTKLLNMTQQFADILAEELPELRQDLSPRDEECSVLELCENMSD 350
Query: 287 ASGKDSSVPEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPAS 346
+ + ++ E +W++EE R FYE LP+L ++P ++ P P+EQ D
Sbjct: 351 QARE--TLNELLWENEEGRQFYENLPNLSVYLPNLIPKVTAETL--PPPDPVEQMIDIEK 406
Query: 347 EPDQGQLAAQDTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDK 406
E + + Q E D+ + + E EKE A P
Sbjct: 407 EAKEIEEGEQVKDEGDEDIKPA-----------ELEDEKEDADVP--------------- 440
Query: 407 EKAKDPDKEKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCY 466
V + K+ LD+ L L CV+R++ID +EF
Sbjct: 441 -------------------VSLQSNKVL------LDSFLTTLTACVNREMIDSAAIEFST 475
Query: 467 -LNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLIN 525
LN+K NRK+LVRALF V RT L+LLP+YSR+VATL + +V++ L L ++F + +
Sbjct: 476 NLNTKHNRKKLVRALFTVQRTRLDLLPFYSRLVATLHPYIPEVATDLCNFLRQDFKYHVR 535
Query: 526 KKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRF 585
KKDQ+NIETK++ +RFIGEL KF + P C K L +F HH I++ C+LLETCGRF
Sbjct: 536 KKDQINIETKVKIVRFIGELTKFGMYPRADALQCFKQLLLNFAHHYIEMTCHLLETCGRF 595
Query: 586 LYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVS--KVRPPL 643
L P++ R L+ +MR K++ D R++T++ENAYY P + SAR S K+RPPL
Sbjct: 596 LLHQPDSHQRTKVYLDQMMRKKSMLASDSRYLTMIENAYYQVVPVDSSARSSHIKIRPPL 655
Query: 644 HQYIRKLLFSDL-DKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASL 700
HQYIR+LLF +L +K S +L+QLRKL W D E SY ++C K K+ I +A +
Sbjct: 656 HQYIRQLLFVELGNKGSTNKILKQLRKLNWKDPEVASYAVRCLTSAWKVKFPNIRTLAGV 715
Query: 701 TAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIF 760
A L+ Y + +VD VLE+IR LE QRR++ ++L ELYNY V+SSV+F
Sbjct: 716 VAELTLYQEFVGHRIVDAVLEDIRWSLEFPISKFNQRRVSMAKYLAELYNYRMVESSVVF 775
Query: 761 DTLYLILVFG 770
LY + F
Sbjct: 776 KVLYTCITFA 785
>gi|425775765|gb|EKV14017.1| Nonsense-mediated mRNA decay factor (Upf2), putative [Penicillium
digitatum PHI26]
Length = 1184
Score = 348 bits (894), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 203/588 (34%), Positives = 310/588 (52%), Gaps = 79/588 (13%)
Query: 194 FKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYR 253
F+ Y V+ + + +L Q NA+ GE+ E+ +++EK K + L
Sbjct: 296 FRSILSRYLEDVKAHVVRDQRALAQQNRRNAEAYVKSGEIFEDRQANFEKQSKVLEKLVA 355
Query: 254 NVSSLAEALDMQPPVMPEDVHTTRVTSG-------EDASPASGKDSSVPEPVWDDEETRA 306
N L EAL P + E T SG D G+ + + W+DEE R
Sbjct: 356 NTQVLCEALGTDMPDLAEKEPTDASASGGIGLVKTTDYLRGQGEGAGI----WEDEEERR 411
Query: 307 FYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTAEVSADLG 366
FYE L DL+ VPAVLL + + K
Sbjct: 412 FYENLVDLKGKVPAVLLEDGKKK------------------------------------- 434
Query: 367 ASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEKDTERKV 426
+ ++ E GK K + E + +P EK A D D D +
Sbjct: 435 ---KSEAEESGKRKPDGETADSAEPSDEKS------------AADAD-------DQSTAI 472
Query: 427 ETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRT 486
++ G +D+LL +LP ++D +DQ ++FC++NSK++R RLV+A+ ++P+
Sbjct: 473 ASK------TVGAQVDSLLAKLPELQTKDQVDQFALDFCWVNSKASRNRLVKAVSDIPKG 526
Query: 487 SLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNI-ETKIRNIRFIGEL 545
++LLP YSR+VATL + D+ L L+EEF L +K + + + ++ N+R++ EL
Sbjct: 527 RIDLLPLYSRLVATLGQYLPDIPQGLTTYLDEEFRSLQRRKSKEFLGQVRMSNVRYLAEL 586
Query: 546 CKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMR 605
KF + P ++F C K LD+F+ NI++ +LLE CGR+L R+P++S RMA+ LE L R
Sbjct: 587 TKFGVVPEHIIFHCFKVSLDEFSRMNIEIIGHLLENCGRYLLRNPDSSPRMASFLETLSR 646
Query: 606 LKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLR 665
K V++L + ++ENA Y PP R A K R P+ QYIR+L++ D++K + +L+
Sbjct: 647 KKTVQHLAQQERMVIENAIYYVDPPPRPAIQQKERTPMEQYIRRLIYLDMNKRNYTKILK 706
Query: 666 QLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEI 723
+RKL W + E L + F K K KYG IHL+A L + L RYH F + +VD VLE++
Sbjct: 707 SIRKLHWEEQEVVEILERVFSKPVKVKYGSIHLLAILVSALYRYHQGFVIGIVDNVLEQV 766
Query: 724 RLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
LGLE ND+ Q+R+A +++LGELYNY+ +DS VIFDTLY ++ FGH
Sbjct: 767 TLGLEQNDFKFNQKRIAEIKYLGELYNYKMIDSPVIFDTLYRLITFGH 814
>gi|425773547|gb|EKV11895.1| Nonsense-mediated mRNA decay factor (Upf2), putative [Penicillium
digitatum Pd1]
Length = 1184
Score = 348 bits (894), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 203/588 (34%), Positives = 310/588 (52%), Gaps = 79/588 (13%)
Query: 194 FKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYR 253
F+ Y V+ + + +L Q NA+ GE+ E+ +++EK K + L
Sbjct: 296 FRSILSRYLEDVKAHVVRDQRALAQQNRRNAEAYVKSGEIFEDRQANFEKQSKVLEKLVA 355
Query: 254 NVSSLAEALDMQPPVMPEDVHTTRVTSG-------EDASPASGKDSSVPEPVWDDEETRA 306
N L EAL P + E T SG D G+ + + W+DEE R
Sbjct: 356 NTQVLCEALGTDMPDLAEKEPTDASASGGIGLVKTTDYLRGQGEGAGI----WEDEEERR 411
Query: 307 FYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTAEVSADLG 366
FYE L DL+ VPAVLL + + K
Sbjct: 412 FYENLVDLKGKVPAVLLEDGKKK------------------------------------- 434
Query: 367 ASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEKDTERKV 426
+ ++ E GK K + E + +P EK A D D D +
Sbjct: 435 ---KSEAEESGKRKPDGETADSAEPSDEKS------------AADAD-------DQSTAI 472
Query: 427 ETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRT 486
++ G +D+LL +LP ++D +DQ ++FC++NSK++R RLV+A+ ++P+
Sbjct: 473 ASK------TVGAQVDSLLAKLPELQTKDQVDQFALDFCWVNSKASRNRLVKAVSDIPKG 526
Query: 487 SLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNI-ETKIRNIRFIGEL 545
++LLP YSR+VATL + D+ L L+EEF L +K + + + ++ N+R++ EL
Sbjct: 527 RIDLLPLYSRLVATLGQYLPDIPQGLTTYLDEEFRSLQRRKSKEFLGQVRMSNVRYLAEL 586
Query: 546 CKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMR 605
KF + P ++F C K LD+F+ NI++ +LLE CGR+L R+P++S RMA+ LE L R
Sbjct: 587 TKFGVVPEHIIFHCFKVSLDEFSRMNIEIIGHLLENCGRYLLRNPDSSPRMASFLETLSR 646
Query: 606 LKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLR 665
K V++L + ++ENA Y PP R A K R P+ QYIR+L++ D++K + +L+
Sbjct: 647 KKTVQHLAQQERMVIENAIYYVDPPPRPAIQQKERTPMEQYIRRLIYLDMNKRNYTKILK 706
Query: 666 QLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEI 723
+RKL W + E L + F K K KYG IHL+A L + L RYH F + +VD VLE++
Sbjct: 707 SIRKLHWEEQEVVEILERVFSKPVKVKYGSIHLLAILVSALYRYHQGFVIGIVDNVLEQV 766
Query: 724 RLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
LGLE ND+ Q+R+A +++LGELYNY+ +DS VIFDTLY ++ FGH
Sbjct: 767 TLGLEQNDFKFNQKRIAEIKYLGELYNYKMIDSPVIFDTLYRLITFGH 814
>gi|261195386|ref|XP_002624097.1| nonsense-mediated mRNA decay factor [Ajellomyces dermatitidis
SLH14081]
gi|239587969|gb|EEQ70612.1| nonsense-mediated mRNA decay factor [Ajellomyces dermatitidis
SLH14081]
Length = 1228
Score = 348 bits (893), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 210/594 (35%), Positives = 307/594 (51%), Gaps = 76/594 (12%)
Query: 194 FKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYR 253
F+ Y V+ + + +L +NA+ GE+ E+ S++EK K+++ L
Sbjct: 309 FRNILSRYLEDVKAHVVRDQKALATQSRKNAEAYVKSGEIFEDRQSNFEKQSKAHEKLVS 368
Query: 254 NVSSLAEALDMQPPVMPED-------------VHTTRVTSGEDASPASGKDSSVPEPVWD 300
N L E L P + E V T G+ P +W+
Sbjct: 369 NTQVLCEILGSDMPDLLEKEAADSTHGSSIGLVKTGEYLRGQGEGPG----------IWE 418
Query: 301 DEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTAE 360
DEE R FYE L DL+ VPAVLL + + K ++ + + ++ + T
Sbjct: 419 DEEERRFYENLVDLKGKVPAVLLEDGKKKKSD------------GDDQVKKKVDGEATNG 466
Query: 361 VSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEK 420
V AD + GKG E K A + +E
Sbjct: 467 VPAD-----------------------------QSGKG----EASKPGATTSEPTNNQEA 493
Query: 421 DTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRAL 480
D + K G +DALL +LP ++D +DQL ++FC+LNSK++R RLV+A+
Sbjct: 494 DDQSTAMVNK-----TVGAQVDALLAKLPELQTKDSVDQLALDFCFLNSKASRNRLVKAI 548
Query: 481 FNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNI-ETKIRNI 539
P+ +LLP Y+R+VATL + D+ LI L+EEF L +K + + + + NI
Sbjct: 549 QEAPKGRADLLPLYARLVATLGQYLPDIPQGLISYLDEEFRSLQRRKQKEFLGQVRTSNI 608
Query: 540 RFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANM 599
R++ EL KF + P ++F C K LDDF+ NI++ NLLE CGR+L R+PETS RM +
Sbjct: 609 RYLAELTKFGVVPEHVIFHCFKVSLDDFSRMNIEIIGNLLENCGRYLLRNPETSPRMVSF 668
Query: 600 LEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSS 659
LE L R K ++L + ++ENA Y PP+R A K R P+ YIRKL++ D++K +
Sbjct: 669 LETLSRKKAAQHLGQQERMIIENAMYYVDPPQRPAIQQKERTPMELYIRKLVYLDMNKRN 728
Query: 660 IEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVD 717
VL+ +RKL W + E L + F K K KYG IH++A L + L RYH F + +VD
Sbjct: 729 YPKVLKCIRKLHWEEQEVVQILERIFSKPGKVKYGNIHILAILVSALYRYHQSFVIGIVD 788
Query: 718 EVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
+LE I LGLE N++ QRR+A +++LGELYNY+ VDS VIFDTLY I+ FGH
Sbjct: 789 NILEYITLGLEQNEFKFNQRRIAEVKYLGELYNYKMVDSPVIFDTLYRIVTFGH 842
>gi|327349025|gb|EGE77882.1| nonsense-mediated mRNA decay factor [Ajellomyces dermatitidis ATCC
18188]
Length = 1214
Score = 348 bits (893), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 210/594 (35%), Positives = 307/594 (51%), Gaps = 76/594 (12%)
Query: 194 FKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYR 253
F+ Y V+ + + +L +NA+ GE+ E+ S++EK K+++ L
Sbjct: 309 FRNILSRYLEDVKAHVVRDQKALATQSRKNAEAYVKSGEIFEDRQSNFEKQSKAHEKLVS 368
Query: 254 NVSSLAEALDMQPPVMPED-------------VHTTRVTSGEDASPASGKDSSVPEPVWD 300
N L E L P + E V T G+ P +W+
Sbjct: 369 NTQVLCEILGSDMPDLLEKEAADSTHGSSIGLVKTGEYLRGQGEGPG----------IWE 418
Query: 301 DEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTAE 360
DEE R FYE L DL+ VPAVLL + + K ++ + + ++ + T
Sbjct: 419 DEEERRFYENLVDLKGKVPAVLLEDGKKKKSD------------GDDQVKKKVDGEATNG 466
Query: 361 VSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEK 420
V AD + GKG E K A + +E
Sbjct: 467 VPAD-----------------------------QSGKG----EASKPGATTSEPTNNQEA 493
Query: 421 DTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRAL 480
D + K G +DALL +LP ++D +DQL ++FC+LNSK++R RLV+A+
Sbjct: 494 DDQSTAMVNK-----TVGAQVDALLAKLPELQTKDSVDQLALDFCFLNSKASRNRLVKAI 548
Query: 481 FNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNI-ETKIRNI 539
P+ +LLP Y+R+VATL + D+ LI L+EEF L +K + + + + NI
Sbjct: 549 QEAPKGRADLLPLYARLVATLGQYLPDIPQGLISYLDEEFRSLQRRKQKEFLGQVRTSNI 608
Query: 540 RFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANM 599
R++ EL KF + P ++F C K LDDF+ NI++ NLLE CGR+L R+PETS RM +
Sbjct: 609 RYLAELTKFGVVPEHVIFHCFKVSLDDFSRMNIEIIGNLLENCGRYLLRNPETSPRMVSF 668
Query: 600 LEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSS 659
LE L R K ++L + ++ENA Y PP+R A K R P+ YIRKL++ D++K +
Sbjct: 669 LETLSRKKAAQHLGQQERMIIENAMYYVDPPQRPAIQQKERTPMELYIRKLVYLDMNKRN 728
Query: 660 IEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVD 717
VL+ +RKL W + E L + F K K KYG IH++A L + L RYH F + +VD
Sbjct: 729 YPKVLKCIRKLHWEEQEVVQILERIFSKPGKVKYGNIHILAILVSALYRYHQSFVIGIVD 788
Query: 718 EVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
+LE I LGLE N++ QRR+A +++LGELYNY+ VDS VIFDTLY I+ FGH
Sbjct: 789 NILEYITLGLEQNEFKFNQRRIAEVKYLGELYNYKMVDSPVIFDTLYRIVTFGH 842
>gi|239610542|gb|EEQ87529.1| nonsense-mediated mRNA decay factor [Ajellomyces dermatitidis ER-3]
Length = 1228
Score = 348 bits (892), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 210/594 (35%), Positives = 307/594 (51%), Gaps = 76/594 (12%)
Query: 194 FKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYR 253
F+ Y V+ + + +L +NA+ GE+ E+ S++EK K+++ L
Sbjct: 309 FRNILSRYLEDVKAHVVRDQKALATQSRKNAEAYVKSGEIFEDRQSNFEKQSKAHEKLVS 368
Query: 254 NVSSLAEALDMQPPVMPED-------------VHTTRVTSGEDASPASGKDSSVPEPVWD 300
N L E L P + E V T G+ P +W+
Sbjct: 369 NTQVLCEILGSDMPDLLEKEAADSTHGSSIGLVKTGEYLRGQGEGPG----------IWE 418
Query: 301 DEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTAE 360
DEE R FYE L DL+ VPAVLL + + K ++ + + ++ + T
Sbjct: 419 DEEERRFYENLVDLKGKVPAVLLEDGKKKKSD------------GDDQVKKKVDGEATNG 466
Query: 361 VSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEK 420
V AD + GKG E K A + +E
Sbjct: 467 VPAD-----------------------------QSGKG----EASKPGATTSEPTNNQEA 493
Query: 421 DTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRAL 480
D + K G +DALL +LP ++D +DQL ++FC+LNSK++R RLV+A+
Sbjct: 494 DDQSTAMVNK-----TVGAQVDALLAKLPELQTKDSVDQLALDFCFLNSKASRNRLVKAI 548
Query: 481 FNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNI-ETKIRNI 539
P+ +LLP Y+R+VATL + D+ LI L+EEF L +K + + + + NI
Sbjct: 549 QEAPKGRADLLPLYARLVATLGQYLPDIPQGLISYLDEEFRSLQRRKQKEFLGQVRTSNI 608
Query: 540 RFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANM 599
R++ EL KF + P ++F C K LDDF+ NI++ NLLE CGR+L R+PETS RM +
Sbjct: 609 RYLAELTKFGVVPEHVIFHCFKVSLDDFSRMNIEIIGNLLENCGRYLLRNPETSPRMVSF 668
Query: 600 LEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSS 659
LE L R K ++L + ++ENA Y PP+R A K R P+ YIRKL++ D++K +
Sbjct: 669 LETLSRKKAAQHLGQQERMIIENAMYYVDPPQRPAIQQKERTPMELYIRKLVYLDMNKRN 728
Query: 660 IEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVD 717
VL+ +RKL W + E L + F K K KYG IH++A L + L RYH F + +VD
Sbjct: 729 YPKVLKCIRKLHWEEQEVVQILERIFSKPGKVKYGNIHILAILVSALYRYHQSFVIGIVD 788
Query: 718 EVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
+LE I LGLE N++ QRR+A +++LGELYNY+ VDS VIFDTLY I+ FGH
Sbjct: 789 NILEYITLGLEQNEFKFNQRRIAEVKYLGELYNYKMVDSPVIFDTLYRIVTFGH 842
>gi|258565341|ref|XP_002583415.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237907116|gb|EEP81517.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 1131
Score = 348 bits (892), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 206/585 (35%), Positives = 305/585 (52%), Gaps = 64/585 (10%)
Query: 194 FKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYR 253
F+ Y V++ + +H +L + NA+ GE+ E+ S++EK K+ + L
Sbjct: 281 FRNIMGKYLEDVKKHVIRDHKALAMLSRRNAEAYVKSGEILEDRQSNFEKQSKAQEKLVT 340
Query: 254 NVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASG---KDSSVPEPVWDDEETRAFYEC 310
N +L + L P + E ++SG +G + +W+DEE R FYE
Sbjct: 341 NTQTLCDILGSDMPDLAEKEALDSLSSGTIGLVKTGEYLRGQGEGPGIWEDEEERRFYEN 400
Query: 311 LPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTAEVSADLGASPE 370
L DL+ VPAVLL
Sbjct: 401 LVDLKGKVPAVLL----------------------------------------------- 413
Query: 371 GKSVEKGKDKEEKEKEKAKD-PDKEKGKGKDKEEKDKEKAKDPDKEKGKEKDTERKVETE 429
E GK K+ + ++A++ D E G E K + A+ D + D +
Sbjct: 414 ----EDGKKKKGEGDDQARNKTDAELANGATSESKAEALAQTADITTRETDDQSTAI--- 466
Query: 430 KEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLE 489
+ G +DALL +LP ++D +DQL +EFC+LNSK++R R ++A+ VP+ +
Sbjct: 467 ---VNKTVGAQVDALLAKLPELQNKDAVDQLALEFCFLNSKASRNRFIKAVQEVPKGRTD 523
Query: 490 LLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNI-ETKIRNIRFIGELCKF 548
LLP Y R+VATL + D+ LI L+EEF L +K + + + + NIR++ EL KF
Sbjct: 524 LLPLYGRLVATLGQYLPDIPQGLIAYLDEEFRSLQRRKQKEFLGQVRTSNIRYLAELTKF 583
Query: 549 KIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKN 608
+ P ++F C K LDDF+ NI++ NLLE CGR+L R+PETS RMA+ LE L R K
Sbjct: 584 GVVPEHVIFHCFKVSLDDFSRMNIEIIGNLLENCGRYLLRNPETSPRMASFLETLGRKKA 643
Query: 609 VKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLR 668
++L + ++ENA Y PP R A K R P+ ++RKL++ D++K + +L+ +R
Sbjct: 644 AQHLGQQERMVLENAMYYVDPPPRPAIQQKERTPMELFVRKLVYLDMNKRNYPKILKSIR 703
Query: 669 KLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLG 726
KL W + E L F K K KYG IHL+A L + L RYH +F + ++D LE I LG
Sbjct: 704 KLHWEEPEVVHILESVFGKPAKVKYGNIHLLALLVSALYRYHQDFVIDIIDNTLERITLG 763
Query: 727 LELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
LE ND+ Q R+A +++LGELYNY+ VDS VIFDTLY I+ FGH
Sbjct: 764 LEQNDFKFNQERIADVKYLGELYNYKMVDSPVIFDTLYRIVTFGH 808
>gi|295674191|ref|XP_002797641.1| nonsense-mediated mRNA decay protein [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226280291|gb|EEH35857.1| nonsense-mediated mRNA decay protein [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 1171
Score = 348 bits (892), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 205/584 (35%), Positives = 309/584 (52%), Gaps = 57/584 (9%)
Query: 194 FKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYR 253
FK Y V+ + + +L +NA+ GE+ E+ S++EK K+++ L
Sbjct: 344 FKNILCRYLEDVKAHVIRDQKALATQSRKNAEAYVKSGEIFEDRQSNFEKHAKAHEKLVS 403
Query: 254 NVSSLAEALDMQ-PPVMPEDVHTTRVTSGEDASPASG--KDSSVPEPVWDDEETRAFYEC 310
N L E L + P +M ++ + + SG A + +W+DEE R FYE
Sbjct: 404 NTQVLCEILGVDMPDLMEKETVESALGSGIGLVKAGEYLRGHGEGPGIWEDEEERRFYEN 463
Query: 311 LPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTAEVSADLGASPE 370
L DL+ VPAVLL + + K + Q+ + E+ D+G
Sbjct: 464 LVDLKGKVPAVLLEDGKKKKTD----------------GDDQVKKKADGELPNDVGVDHS 507
Query: 371 GKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEKDTERKVETEK 430
GK + PD + ++E + A
Sbjct: 508 GKG-------------EVTKPDHSSSEPANQEADSQSIAM-------------------- 534
Query: 431 EKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLEL 490
+ G +D LL +LP +++ +DQL ++FC+LNSK++R RLV+A+ P+ +L
Sbjct: 535 --VNKTVGAQVDMLLAKLPELQTKNSVDQLALDFCFLNSKASRNRLVKAIQEAPKGRTDL 592
Query: 491 LPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKK-DQMNIETKIRNIRFIGELCKFK 549
LP Y+R+VATL + D+ LI L+EEF L +K + + + NIR++ EL KF
Sbjct: 593 LPLYARLVATLGQYLPDIPQSLISYLDEEFRSLQRRKLKEFLGQVRTSNIRYLAELTKFG 652
Query: 550 IAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNV 609
+ P ++F C K LDDF+ NI++ NLLE CGR+L R+PET+ RMA+ LE L R K
Sbjct: 653 VVPEHVIFHCFKVSLDDFSRMNIEIIGNLLENCGRYLLRNPETAPRMASFLETLSRKKAA 712
Query: 610 KNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRK 669
++L + ++ENA Y PP+R A K R P+ QYIRKL+F D++K + +L+ +RK
Sbjct: 713 QHLGQQERMIIENAMYYVDPPQRPAIQQKERTPVEQYIRKLIFLDMNKRNCSKILKSIRK 772
Query: 670 LPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGL 727
L W + E L + F K K KYG IH++AS+ + L R H +F + +VD +LE I LGL
Sbjct: 773 LHWEEQEVVQILERIFSKPGKVKYGNIHIMASIVSALYRCHQDFVIRIVDNILEFITLGL 832
Query: 728 ELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
E ND+ QRR+A +++LGELYNY+ VDS VIFDTLY ++ FGH
Sbjct: 833 EQNDFKQNQRRVAEIKYLGELYNYKMVDSPVIFDTLYRLVTFGH 876
>gi|302509010|ref|XP_003016465.1| hypothetical protein ARB_04754 [Arthroderma benhamiae CBS 112371]
gi|291180035|gb|EFE35820.1| hypothetical protein ARB_04754 [Arthroderma benhamiae CBS 112371]
Length = 1222
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 207/584 (35%), Positives = 311/584 (53%), Gaps = 68/584 (11%)
Query: 194 FKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYR 253
FK + Y V++ + + +L NA+ GE+ E+ S++EK K+++ L
Sbjct: 300 FKNVLNRYLEDVKKHVSRDQKALANQSRRNAEAYVKSGEILEDRQSNFEKQTKAHEKLVS 359
Query: 254 NVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASG---KDSSVPEPVWDDEETRAFYEC 310
N SL E L ++ P + E + SG +G + +W+DEE R FYE
Sbjct: 360 NTQSLCEILGVEMPDLAEKDASDGTMSGSIGLVKTGEYLRGQGEGAGIWEDEEERRFYEN 419
Query: 311 LPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTAEVSADLGASPE 370
L D + VPAVLL + + K + +P +P SE G A+PE
Sbjct: 420 LADFKGKVPAVLLEDGKKKKADGDDQPKMKPD---SEGQNGT--------------AAPE 462
Query: 371 GKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEKDTERKVETEK 430
G S PD + G A++P+ E+
Sbjct: 463 GTS----------------KPDSQAGDSS---------AREPE-------------ESGT 484
Query: 431 EKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLEL 490
+ G +DALL +LP +++ +DQL ++FC+LNSK++R RLV+A+ VP+ +L
Sbjct: 485 TIVNKSVGAQVDALLSKLPELANKEAVDQLALDFCFLNSKASRNRLVKAVQEVPKGRSDL 544
Query: 491 LPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNI-ETKIRNIRFIGELCKFK 549
LP Y+R+VATL + DV LI L++EF L +K + + + + NIR++ EL KF
Sbjct: 545 LPLYARLVATLGQYLPDVPQGLITYLDDEFRSLQRRKQKEFLGQVRTSNIRYLAELTKFG 604
Query: 550 IAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNV 609
+ P ++F C K LD+F+ NLLE CGR+L R+PET+ RMA+ LE L R K+
Sbjct: 605 VVPEHVIFHCFKVSLDEFSR-------NLLENCGRYLLRNPETAPRMASFLETLGRKKSA 657
Query: 610 KNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRK 669
++L + ++ENA Y PP R A K R P+ YIRKL++ D++K + +L+ +RK
Sbjct: 658 QHLGQQERMIIENAMYYVDPPPRPAIQQKERTPMELYIRKLIYLDMNKRNYTKILKAIRK 717
Query: 670 LPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGL 727
L W + E + L + F K K KYG IHL+A + + L RYH F + V+D VLE I +GL
Sbjct: 718 LHWEEPEVVNILERIFSKPGKIKYGNIHLLAIIISALYRYHQSFVIGVIDNVLERITVGL 777
Query: 728 ELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
E ND+ Q R++ +++LGELYNY+ VDS VIFDTLY I+ +GH
Sbjct: 778 ENNDFKFNQSRISEVKYLGELYNYKMVDSPVIFDTLYRIVTYGH 821
>gi|16117302|dbj|BAB16725.2| hypothetical protein [Macaca fascicularis]
Length = 596
Score = 347 bits (890), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 168/312 (53%), Positives = 220/312 (70%), Gaps = 3/312 (0%)
Query: 462 VEFCY-LNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEF 520
++FC +N+K+NRK+LVRALF VPR L+LLP+Y+R+VATL CM DV+ L ML +F
Sbjct: 1 MDFCMNMNTKANRKKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDF 60
Query: 521 NFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLE 580
F + KKDQ+NIETK + +RFIGEL KFK+ CLK L DF+HH+I++AC LLE
Sbjct: 61 RFHVRKKDQINIETKNKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLE 120
Query: 581 TCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVR 640
TCGRFL+RSPE+ +R + +LE +MR K +LD R+VT+VENAYY C PP V K R
Sbjct: 121 TCGRFLFRSPESHLRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKR 180
Query: 641 PPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIA 698
PPL +Y+RKLL+ DL K + E VLRQ+RKLPW D E Y++ C + + KY IH +A
Sbjct: 181 PPLQEYVRKLLYKDLSKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVA 240
Query: 699 SLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSV 758
+L AGL Y ++ + VVD VLE+IRLG+E+N QRR++ +FLGELYNY V+S+V
Sbjct: 241 NLLAGLVLYQEDVGIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAV 300
Query: 759 IFDTLYLILVFG 770
IF TLY FG
Sbjct: 301 IFRTLYSFTSFG 312
>gi|443712315|gb|ELU05692.1| hypothetical protein CAPTEDRAFT_168822 [Capitella teleta]
Length = 1086
Score = 345 bits (884), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 166/323 (51%), Positives = 229/323 (70%), Gaps = 3/323 (0%)
Query: 451 CVSRDLIDQLTVEFCY-LNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVS 509
CV+R+LIDQ FC LN+KSNR++L + LF V RT +LLP+Y+R VATL+ M D+S
Sbjct: 415 CVNRELIDQAAENFCLNLNTKSNRRKLTKTLFTVHRTRYDLLPFYARFVATLNPLMPDIS 474
Query: 510 SMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTH 569
+ L ML +F + + KKDQ+NIE+K++ +RFIGEL KF++ C+K L DFTH
Sbjct: 475 TDLCGMLMSDFKWHVRKKDQINIESKLKTVRFIGELVKFQMFAKSEALQCMKMLLYDFTH 534
Query: 570 HNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKP 629
HNI++AC+LLETCGRFLYRSP++ R LE++MR K +LD R+ T++ENA+Y P
Sbjct: 535 HNIEMACSLLETCGRFLYRSPDSHHRTKVYLEVMMRKKVALHLDSRYSTMIENAFYYSNP 594
Query: 630 PERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVH 687
P+ V PP+H+YIRKLL+ DL K++IE VLRQLRKL W+D E SY +KC +V
Sbjct: 595 PDVKGVVQLYVPPMHRYIRKLLYKDLSKTTIERVLRQLRKLDWNDPEIRSYAVKCLTEVW 654
Query: 688 KGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGE 747
+ +Y +H A+L AGL+ YH++ A+ VVD VLE+IRLG+ELN QRR++ +++LGE
Sbjct: 655 QVRYSAVHCCANLLAGLAPYHEDVAIRVVDAVLEDIRLGMELNLPKHNQRRISMVKYLGE 714
Query: 748 LYNYEHVDSSVIFDTLYLILVFG 770
LYNY ++S+VIF TLY + G
Sbjct: 715 LYNYRMIESAVIFKTLYSFITLG 737
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 134/268 (50%), Gaps = 19/268 (7%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
L ICS LHQRY + SP L+D +KV PGK E + L R L+ +L +G
Sbjct: 98 LLICSALHQRYAELSPTLMDSWMKVL-PGKKDEKVANPSKL-----RVDLRFFADLVSVG 151
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGLPLSGPGQEIYEE 179
+ + + ++ +L ++ D D NL+++ SF R G + G+ L + + E+
Sbjct: 152 VFVEKE-GLGVLANLLTLLVNNDPDD-HPNLSIILSFCRHCGDDYAGI-LPRKYRLLSEQ 208
Query: 180 FFKGLNI------TADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGEL 233
+ GL + A+++K ++ Y+++V + L EH R ++ +N K KGE+
Sbjct: 209 Y--GLTVPMSTVLRAERQKACRQLLKDYFSSVSKHLLKEHRRFRDLKRQNDKWYQTKGEV 266
Query: 234 SEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDAS-PASGKDS 292
S++ + E + +++ L NV +L++ LD P +PED +S D G +
Sbjct: 267 SDDKRAQEEAAKSTFEKLLSNVQNLSDLLDEDMPTLPEDRQDDLESSMPDFFLSMKGSEF 326
Query: 293 SVPEPVWDDEETRAFYECLPDLRAFVPA 320
+++D+ET+ FYE LP L + VP
Sbjct: 327 DGNTGLFEDDETKQFYEHLPALMSVVPG 354
>gi|367045960|ref|XP_003653360.1| hypothetical protein THITE_2115730 [Thielavia terrestris NRRL 8126]
gi|347000622|gb|AEO67024.1| hypothetical protein THITE_2115730 [Thielavia terrestris NRRL 8126]
Length = 1148
Score = 344 bits (883), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 166/338 (49%), Positives = 229/338 (67%), Gaps = 3/338 (0%)
Query: 438 GTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRM 497
G +DALL RLP ++D IDQ+ ++FCYLNSK++R RL++AL +VP+ +LLP +SR+
Sbjct: 462 GAQVDALLARLPDLTTKDAIDQMAIDFCYLNSKASRNRLIKALTDVPKGRGDLLPCWSRL 521
Query: 498 VATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNI-ETKIRNIRFIGELCKFKIAPAGLV 556
VATL M D+ L++ L+ EF L +KD+ + + ++ NIR++ EL KF I P +V
Sbjct: 522 VATLGQYMTDIPKGLVEYLDAEFRSLQRRKDKEFLGQVRLSNIRYLAELTKFGIVPEHVV 581
Query: 557 FSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRH 616
F CLK LDDF+ NI++ CNLLE CGR+L R+PETS RMA+ LE L R K+V+++
Sbjct: 582 FHCLKVSLDDFSRMNIEIICNLLENCGRYLLRNPETSPRMASFLETLQRKKSVQHIGAAE 641
Query: 617 VTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE 676
L+ENA Y PP+R A K R P+ +IRKL++SDL+K S VLRQ+R+L W + E
Sbjct: 642 RMLIENAVYYVDPPQRPAIQQKERTPMELFIRKLIYSDLNKQSYNKVLRQIRRLHWEEKE 701
Query: 677 --SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGM 734
+ L K F K K KYG IHL+A L + + RYH +F + VVD + E I GLE ND+
Sbjct: 702 VVAVLHKVFSKPGKVKYGNIHLLAILLSAIYRYHPDFVIGVVDTLTESIAFGLEQNDFKF 761
Query: 735 QQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHG 772
QRRLA +++LGELYNY ++ VIFDT+Y I+ FGHG
Sbjct: 762 NQRRLAEVKYLGELYNYRMLEHPVIFDTMYKIMTFGHG 799
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 67/142 (47%), Gaps = 3/142 (2%)
Query: 194 FKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYR 253
F+ Y+ ++ L + ++ +NA+ GE+ E+ +++EK K+ + L
Sbjct: 283 FRNVLKRYFEDLKGHLVRDQKAIYTQSRKNAEAYVKSGEVFEDRQANFEKQVKAQERLVA 342
Query: 254 NVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASG---KDSSVPEPVWDDEETRAFYEC 310
N +A+ + + P + + + SG +G + +W+DEE R FYE
Sbjct: 343 NAQVIADVIGAEMPDLKDHDDPSSGASGTIGIVKAGEYLRGQGDGAGIWEDEEERRFYEN 402
Query: 311 LPDLRAFVPAVLLGEAEHKANE 332
L DL+ VPA+LL E + K E
Sbjct: 403 LVDLKGKVPAILLEEVKKKKPE 424
>gi|312372916|gb|EFR20770.1| hypothetical protein AND_19488 [Anopheles darlingi]
Length = 1394
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 238/723 (32%), Positives = 363/723 (50%), Gaps = 70/723 (9%)
Query: 60 FLKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFI 119
+ +C+ LHQ Y +FS + + K+ K GE + A K R L+ EL +
Sbjct: 161 IITLCNYLHQTYAEFSSTMFENWQKLLLI-KPGEKVQ-----NASKMRVDLRFYAELVSV 214
Query: 120 GIIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGLPLSGPGQEIYE 178
GI + I + ++ +D++ NL+++ SF + G + GL LS
Sbjct: 215 GIFSNK-IGLPLLGACLVGLIAQDKEE-HINLSIVLSFCKHCGDEYAGL-LSAR------ 265
Query: 179 EFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENS 238
L A + + K YY+++ E L+ EH L+Q E K+L+ KGE++ E
Sbjct: 266 --MSKLAANASLRNLLKD----YYHSLAEHLRVEHGQLQQAEKSKWKMLHMKGEITSEKR 319
Query: 239 SSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASGKDSSVPEPV 298
+L+ SY L+ + +LA+ L PV+ G P
Sbjct: 320 EQLLQLQSSYTKLFASTETLADLLGEPMPVLLAAPEANVPPEGTVVDEKGEGLEFGPLDP 379
Query: 299 WDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDT 358
W D+ET++FY LPDLR F+P G+ E
Sbjct: 380 WRDDETKSFYVDLPDLRQFLPN-FCGKRE------------------------------- 407
Query: 359 AEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGK 418
E DLG E E+ D++ + E+ + + + + ++ + E E G
Sbjct: 408 -EEEVDLGVEVEPPITEEVLDQDPELDEELTESEIKAFVEQQQQAESVEVV-----EGGA 461
Query: 419 E-KDTERKVETEKEKLKGVEGTN----LDALLQRLPGCVSRDLIDQLTVEFCY-LNSKSN 472
E D +V+ G G N + Q L CV+RDLID +EF N+KS
Sbjct: 462 EIPDATARVDDANGAPNG--GANNRKQFEQFAQSLHNCVNRDLIDNAAIEFLLNFNTKSK 519
Query: 473 RKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNI 532
RKRLV+ LF V RT L+LLP Y+R VA ++ D+ + L QML+ +F + I KKDQ+NI
Sbjct: 520 RKRLVKVLFGVQRTRLDLLPMYARFVAIINLVATDLGAELCQMLKVDFKYHIKKKDQINI 579
Query: 533 ETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPET 592
ETKI+ +R+IGEL KF I CL+ L F HH I++ C LE CG +LY E+
Sbjct: 580 ETKIKVVRYIGELVKFNIYKKLDALYCLRCLLQSFQHHYIEMTCAFLEVCGVYLYNCRES 639
Query: 593 SIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLF 652
+R LE +MRLK ++ R+ LVEN YYL K PE KVRP +H YIR L++
Sbjct: 640 RMRTNAFLEQMMRLKTNTTMNGRYAQLVENCYYLVKRPEGLRMARKVRPLMHTYIRHLIY 699
Query: 653 SDLDKSSIEHVLRQLRKLPWSDCES--YLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDE 710
+L+K++ + +++ LR+L W D ++ Y +KC K + +Y I +A L +GL+ Y ++
Sbjct: 700 RELNKTNADKLIKLLRRLNWDDPDTFEYTVKCLSKAYNVRYHLIRDLADLVSGLASYQEK 759
Query: 711 FAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
+ VVD V E+IR GLE++D + QRR+A +++LGELYNY+ V+++ I +TLY I+ +G
Sbjct: 760 AVIRVVDTVFEDIRAGLEIHDNKLAQRRVAMVKYLGELYNYQLVEATNILNTLYSIISYG 819
Query: 771 HGT 773
T
Sbjct: 820 VQT 822
>gi|443895705|dbj|GAC73050.1| nonsense-mediated mRNA decay 2 protein [Pseudozyma antarctica T-34]
Length = 1243
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 227/754 (30%), Positives = 362/754 (48%), Gaps = 106/754 (14%)
Query: 62 KICSLLHQRYKD--FSPCLIDGL-------LKVFFPGKSGEDLDADRNLKAMKKRSTLKL 112
+I S H R+ FS L L K + + E + D + +++ L++
Sbjct: 126 EIISAFHARFGSTTFSEPLTTSLEHALAPPSKTLYQSATTEQKERDEAARVARQKPLLRI 185
Query: 113 LLELYFIGIIEDS-------SIFINIIKDLTSIEHLKD-----------RDTTQTNLTLL 154
EL + ++ + N+IK L + + KD + QT L+
Sbjct: 186 TAELALVDVVGHTRDAPTGCDWLFNVIKALLATD--KDHANVPLLISVLKGLGQTLLSPA 243
Query: 155 ASFARQGRIFLGLPLSGP---GQEIYEEFFKGLN------ITADQKKIFKKAFHTYYNAV 205
AS R L SG G + F L+ ++++ + F+K F TY+ +
Sbjct: 244 ASLTRDDDSLLADKASGALIIGDAVNVPDFAALDPASAPLVSSEMQAKFRKLFETYFQTL 303
Query: 206 QELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQ 265
+ EH L+ + +N + GE+ E+ +YE++ KS++ + L++ L +
Sbjct: 304 ARRVVKEHQRLQDQDRKNHEAYIRSGEIFEDRQQNYERMTKSFERVRDWARILSDLLGVD 363
Query: 266 PPVMPEDVH-TTRVTSGEDASPASG-----KDSSVPEPVWDDEETRAFYECLPDLRAFVP 319
P + TT V G + S ++ + + W+D++++ FYE L DL +P
Sbjct: 364 MPDLESSASATTAVGLGVNLDSKSAFERADEEFAPDQSPWEDQDSQKFYEDLLDLGDIIP 423
Query: 320 AVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTAEVSADLGASPEGKSVEKGKD 379
PS+ + AS + + QD AE SA+ +
Sbjct: 424 -------------PSILAQTTGINAASSANADK---QDAAEDSAN-------------RT 454
Query: 380 KEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEKDTERKVETEKEKLKGVEGT 439
+E K A P + G E +
Sbjct: 455 EEGKTSTAASTPQLDADAGD-------------------------------EAMNAGPAA 483
Query: 440 NLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVA 499
L L+ +LP +R +ID V+F ++ +K R++LV+ L ++PR ++L PYY+R+ A
Sbjct: 484 QLATLMAKLPDMTNRSMIDSAAVDFAFIATKPARRKLVKHLASLPRNRIDLAPYYARLAA 543
Query: 500 TLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSC 559
TLS M D+ L +LE+EF +L KK+ ET+ +N RF+ EL KFK+ P + C
Sbjct: 544 TLSRYMPDIGPGLTALLEDEFRYLQRKKNVDLTETRAKNARFLSELTKFKVTPTHAILHC 603
Query: 560 LKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTL 619
K CL+DF+ N++V +LLE CGR+L R+ +TS++M +MLE+L R + NLD R + L
Sbjct: 604 FKTCLEDFSGPNVEVVASLLEGCGRYLLRTEDTSVKMRSMLEMLRRKRAAANLDSRQLLL 663
Query: 620 VENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCESY- 678
+ NAYY C PP+R A KVR PL YIR L++ L K +++ V+ QLRKL W D Y
Sbjct: 664 LNNAYYQCNPPKRKAIEQKVRSPLELYIRHLIYHLLAKKTVDTVVLQLRKLAWDDASVYG 723
Query: 679 -LLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQR 737
L F + + +Y IHL+A L L R+H FAV V+D+VLE IR+G+E N + QR
Sbjct: 724 WLKDAFTRAWRIRYSNIHLLAILVYDLDRFHPSFAVDVIDQVLENIRIGMEENIFKHNQR 783
Query: 738 RLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
R+A +LGELYNY V+S ++F+ L+ ++ FGH
Sbjct: 784 RVATACYLGELYNYRLVNSGIVFEQLWSMVTFGH 817
>gi|195480252|ref|XP_002101198.1| GE17488 [Drosophila yakuba]
gi|194188722|gb|EDX02306.1| GE17488 [Drosophila yakuba]
Length = 1260
Score = 340 bits (871), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 232/733 (31%), Positives = 367/733 (50%), Gaps = 73/733 (9%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKK-------RSTLKLL 113
+ + S LH Y DF ++ K N+KA +K R L+L
Sbjct: 181 VTLASRLHCTYADFDVQFLEAWQKAL-------------NIKATEKIGNPSKLRVDLRLF 227
Query: 114 LELYFIGIIEDSSIFINIIKDLTSIEHL--KDRDTTQTNLTLLASFARQ-GRIFLGL--- 167
EL G+I+ + L HL +D+D +N +++ SF R G + GL
Sbjct: 228 AELVSSGVIQMKPGLAQLGVVLV---HLIAQDKDD-HSNFSIILSFCRHCGEEYAGLVPQ 283
Query: 168 PLSGPGQEIYEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKIL 227
+ + E K +TAD++ + Y+ A+ + + AE T L M + +
Sbjct: 284 KMQQLATKYGVEVPKSDFLTADKQLNLRTMLKGYFKALCKHVLAEQTELMNMTKNIRRTM 343
Query: 228 NAKGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPA 287
KGE+S E E ++ +D L + SL+E L P + ++ E +P
Sbjct: 344 ECKGEISTEKREKCELMQAGFDKLLASAQSLSELLGEPLPELAKE--------SECCNPG 395
Query: 288 SGKDS-------SVPEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQ 340
+ D+ V +P W DEETR+FY LPDLR F+P A + ++ LE+
Sbjct: 396 TVIDNMLDSASFGVLDP-WGDEETRSFYTDLPDLRQFLP-------NFSAPKVDLETLEE 447
Query: 341 PTDPASEPDQGQLAAQDTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKD 400
P++ E L A+ DL P S ++ E++ P
Sbjct: 448 PSELTEEAIDANLDAE------MDLDDPPSTTSDTALENPSEEQPTTPVAP--------- 492
Query: 401 KEEKDKEKAKDPDKEKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQL 460
E+ +K + E G+++ ++ + + + D L L CV+++LID
Sbjct: 493 AEDVKPQKMGNALMELGRQQQSQ--LNQNPSQTQNQMRQQFDGFLVNLFNCVNKELIDSA 550
Query: 461 TVEFCY-LNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEE 519
+EF N+K RK+L R +F+V RT L++LPY SR VA + C DV++ L ++L +E
Sbjct: 551 AIEFLLNFNTKHQRKKLTRTIFSVQRTRLDILPYLSRFVAIVHMCNTDVAADLAELLRKE 610
Query: 520 FNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLL 579
F + I+KK+Q+NIE+K++ +RFIGEL KF + CLK L DF HH I++AC +
Sbjct: 611 FKWHIHKKNQLNIESKLKIVRFIGELVKFGLFKKFDALGCLKMLLRDFQHHQIEMACAFV 670
Query: 580 ETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKV 639
E G +LY + + M L+ ++RLK +D RH + +E+ YYL KPPE S R V
Sbjct: 671 EVSGVYLYNCRDARLLMNVFLDQMLRLKTATAMDSRHASQIESVYYLVKPPESSKREPTV 730
Query: 640 RPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCES--YLLKCFMKVHKGKYGQIHLI 697
RPP+H+YIR L+F +L K ++E ++ LR++ W D E+ Y +KC K + ++ + +
Sbjct: 731 RPPMHEYIRHLIFEELCKQNVERCIKMLRRIDWQDAETNCYAIKCLSKAYLLRFPLVRCL 790
Query: 698 ASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSS 757
A L +GLS Y V+D V E+IR GLE++ M QRR+A ++LGE+YNY+ V+S+
Sbjct: 791 ADLVSGLSSYQPRAVTIVIDNVFEDIRAGLEIHSPRMAQRRIAMAKYLGEMYNYKLVEST 850
Query: 758 VIFDTLYLILVFG 770
I +TLY I+ G
Sbjct: 851 HILNTLYSIISLG 863
>gi|340959964|gb|EGS21145.1| putative nonsense-mediated protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1158
Score = 338 bits (867), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 170/383 (44%), Positives = 247/383 (64%), Gaps = 13/383 (3%)
Query: 403 EKDKEKAKDPDKEKGKEKDTERKVETEKEKLKGVE----------GTNLDALLQRLPGCV 452
E+ K+K +D D++ GK+ D E E ++ + G +DALL RLP
Sbjct: 427 EEVKKKKQDSDEQVGKKIDLETAAEAKQVDASAEDQSVAIANKTIGAQVDALLARLPDLT 486
Query: 453 SRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSML 512
++D +DQ+ ++FCYLNSK++R RL++AL +VP+ +LLP ++R+ ATL M DV L
Sbjct: 487 TKDAVDQMAIDFCYLNSKASRNRLIKALTDVPKGRTDLLPCWARLAATLGQYMSDVPKGL 546
Query: 513 IQMLEEEFNFLINKKDQMNI-ETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHN 571
++ L+ EF L +KD+ + + ++ NIR++ EL KF + P +VF CLK LDDF+ N
Sbjct: 547 VEYLDNEFRSLQRRKDKEFLGQVRLINIRYLAELTKFGVVPEHVVFHCLKVSLDDFSRVN 606
Query: 572 IDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPE 631
I++ C +LE CGR+L R+PETS RMA+ LE L R K+V+++ L+ENA Y PP+
Sbjct: 607 IEIICTMLENCGRYLLRNPETSPRMASFLETLQRKKSVQHIGQAEKMLIENAVYYVDPPQ 666
Query: 632 RSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKG 689
R A K R P+ +IRKL+++DL+K S + VLRQ+R+L W + E + L K F K K
Sbjct: 667 RPAIQQKERTPMELFIRKLIYADLNKRSYDKVLRQIRRLHWEEKEVVAVLHKVFSKPSKV 726
Query: 690 KYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELY 749
KY IHL+A L + L RYH F + VVD V+E I LGLE ND+ QRR+A +++LGELY
Sbjct: 727 KYSNIHLLAILLSALYRYHPAFVIGVVDTVIESIALGLEQNDFRYNQRRVAEVKYLGELY 786
Query: 750 NYEHVDSSVIFDTLYLILVFGHG 772
NY ++ VIFDT+Y I+ FG+G
Sbjct: 787 NYRMLEHPVIFDTMYKIMTFGYG 809
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 88/182 (48%), Gaps = 10/182 (5%)
Query: 194 FKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYR 253
FK Y+ V++ L + +L +NA+ GE+ E+ +++EK K+ + L
Sbjct: 294 FKNVLRRYFEDVKQHLIRDQKALASQSRKNAEAYVKSGEVFEDRQANFEKQVKAQERLIA 353
Query: 254 NVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASG---KDSSVPEPVWDDEETRAFYEC 310
N +A+A+ + P + E + +G +G + +W+DEE R FYE
Sbjct: 354 NAQVIADAIGAEMPDLKEHEDVSATANGSIGLVKTGEYLRGQGDGPGIWEDEEERRFYEN 413
Query: 311 LPDLRAFVPAVLLGEAEHK---ANEPSVKPLEQPTDPASEPDQGQLAAQDTAEVSAD--L 365
L DLR VP +LL E + K ++E K ++ T A+E Q +A+D + A+ +
Sbjct: 414 LVDLRGKVPGILLEEVKKKKQDSDEQVGKKIDLET--AAEAKQVDASAEDQSVAIANKTI 471
Query: 366 GA 367
GA
Sbjct: 472 GA 473
>gi|336267872|ref|XP_003348701.1| hypothetical protein SMAC_01723 [Sordaria macrospora k-hell]
gi|380093958|emb|CCC08175.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1148
Score = 338 bits (866), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 163/338 (48%), Positives = 229/338 (67%), Gaps = 3/338 (0%)
Query: 438 GTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRM 497
G +DALL RLP +S+D IDQ+ ++FC+LNSK++R RL++AL +VP+ +LLP ++R+
Sbjct: 465 GAQVDALLVRLPELISKDAIDQMAIDFCFLNSKASRNRLIKALTDVPKGRTDLLPNWARL 524
Query: 498 VATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNI-ETKIRNIRFIGELCKFKIAPAGLV 556
VATL M D+ L+ L+ EF L +K++ + + ++ NIR++ EL KF I P +V
Sbjct: 525 VATLGQYMPDIPRGLVDYLDNEFRSLQRRKEKEFLGQVRLSNIRYLAELTKFGIVPEHVV 584
Query: 557 FSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRH 616
F CLK LDDF+ NI++ CNLLE CGR+L R+PETS RMA+ LE L R K+V+++
Sbjct: 585 FHCLKVSLDDFSRMNIEIICNLLENCGRYLLRNPETSPRMASFLETLQRKKSVQHIGQAE 644
Query: 617 VTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE 676
L+ENA Y PP+R A K R P+ +IRKL++ DL K + +LR +R+L W + E
Sbjct: 645 RMLIENAVYYVDPPQRPAIEVKERTPMELFIRKLIYGDLTKRNYSKILRHIRRLHWEEKE 704
Query: 677 --SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGM 734
+ L K F K K KYG IHL+A L + L +YH EF V V+D+V E I LGLELND+
Sbjct: 705 VVAILHKVFSKPGKVKYGNIHLLAILLSALYKYHGEFVVGVIDQVTESICLGLELNDFKF 764
Query: 735 QQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHG 772
QRR+A +++LGELYNY ++ VIFDT+Y I+ FGHG
Sbjct: 765 NQRRIAEVKYLGELYNYRMLEHPVIFDTMYKIMTFGHG 802
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 84/378 (22%), Positives = 150/378 (39%), Gaps = 72/378 (19%)
Query: 21 CTKFPFCIKNKSNCICKYIANIYIYTYTLLLGLWLT--LVYFLKICSLLHQRY--KDFSP 76
T+ F + ++ + KY++ I Y L L + ++I S LHQR+ DF+
Sbjct: 51 ATQSTFLQEIRTVSLSKYLSEIISACYEGLCKLKSPGDIEAGVEIVSALHQRFGPADFTE 110
Query: 77 CLIDGLL---------KVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIGII---ED 124
L G L K F + E + + + +++R L+++ EL+ + ++ +D
Sbjct: 111 HL--GWLLGKGMATPDKSFLKTLTAEAREKEEKDRLVRQRVLLRVVTELWLVDVLRTLDD 168
Query: 125 SSIFINIIKDLTS--------------------IEHLKD---RDTTQTNLTLLASFARQ- 160
+ + + T +E LKD D NL LL F +
Sbjct: 169 IARPDDATRPTTGPRPEQKPRSPGKGGGAEPFPLEVLKDLLNHDRDHANLPLLVVFVKAF 228
Query: 161 GRIFLGLPLSGP---------------------GQEIYEEFFKGLN-----ITADQKKIF 194
LG+ +G G E EE G + + + ++ F
Sbjct: 229 SWDILGIKAAGQDGRKTVEEDGATKGVEETESEGSEDKEEGTAGTDQDGPFASPELQERF 288
Query: 195 KKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYRN 254
K Y+ V+ L + ++ +NA+ GE+ E+ S++EK K+ + L N
Sbjct: 289 KNILKRYFEDVKGHLVRDQKAIYNQSRKNAEAYVKSGEVFEDRQSNFEKQVKAQERLVSN 348
Query: 255 VSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASG---KDSSVPEPVWDDEETRAFYECL 311
+A+ + + P + +D +G +G + +W+DEE R FYE L
Sbjct: 349 AQVIADIIGAEMPEL-KDTDEGNSANGTIGLVKAGEYLRGQGEGPGIWEDEEERRFYENL 407
Query: 312 PDLRAFVPAVLLGEAEHK 329
DL+ VP +LL E + K
Sbjct: 408 VDLKGKVPGILLEEVKKK 425
>gi|451849152|gb|EMD62456.1| hypothetical protein COCSADRAFT_162040 [Cochliobolus sativus
ND90Pr]
Length = 1204
Score = 338 bits (866), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 206/591 (34%), Positives = 312/591 (52%), Gaps = 67/591 (11%)
Query: 186 ITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLR 245
I+ + ++ FK Y+ V+ L + + +NA+ GE+ E+ S+YEK
Sbjct: 279 ISPELQQRFKNILSRYFEDVKAHLLRDQKHILSQGRKNAEAYVKSGEVFEDRQSNYEKQM 338
Query: 246 KSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASG---KDSSVPEPVWDDE 302
KS + L N LA+AL+ P + E + G +G + S +W+DE
Sbjct: 339 KSQEKLIANAQILADALNADMPDLKEKDGSANTGDGSIGLIKAGEYLRGQSDGAGIWEDE 398
Query: 303 ETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTAEVS 362
E R FYE L DL+ VP +LL E + K
Sbjct: 399 EERRFYENLIDLKDRVPGILLEEVKKK--------------------------------K 426
Query: 363 ADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEKDT 422
AD G GK +E KA+ P+KE + D G ++ T
Sbjct: 427 AD-GDEQVGKKIEP----------KAESPEKEAA----------DNVADSKVADGDDQST 465
Query: 423 ERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFN 482
K G + L A L L ++D +DQ ++FC+LNSK++R RL++A+
Sbjct: 466 -----AIANKSVGAQVDALLARLPEL---ATKDAVDQTAMDFCFLNSKASRNRLIKAVQE 517
Query: 483 VPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNI-ETKIRNIRF 541
+P+ +LLP YSR++ATL M DV L+ L+EEF L +K + + + + +N+R+
Sbjct: 518 IPKGRSDLLPLYSRLIATLGKYMSDVPQGLVSYLDEEFRSLQRRKSKDFLGQVRTQNVRY 577
Query: 542 IGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLE 601
+ EL KF + P ++F CLK LDDF+ NI++ CNLLE CGR+L R+PETS RMA+ LE
Sbjct: 578 LAELTKFGVVPEHVIFHCLKVSLDDFSRMNIEIICNLLENCGRYLLRNPETSPRMASFLE 637
Query: 602 ILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIE 661
L R K + + + L+ENA Y PP+R+A K R P+ ++RK+++ DL + S++
Sbjct: 638 TLQRKKGAQVIGQQERMLIENAVYYVNPPQRAAIEQKERTPIELFLRKIMYQDLTRRSLD 697
Query: 662 HVLRQLRKLPW--SDCESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEV 719
++Q+RK+ W D + L K F K K KY IHL+A + + R+H +FA++VVD++
Sbjct: 698 KTIKQIRKMHWEEEDVVNLLHKVFAKPGKIKYSNIHLLAVMLGTIHRFHQDFAISVVDDL 757
Query: 720 LEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
LE I GLELND+ QRR++ +++LGELY Y VDS +IFDTLY +L +G
Sbjct: 758 LESITFGLELNDFKFNQRRISEVKYLGELYIYRLVDSPLIFDTLYKLLNYG 808
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 70/168 (41%), Gaps = 31/168 (18%)
Query: 497 MVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLV 556
M+ T+ +D + ++ L E F + D + +I ++++GEL +++ + L+
Sbjct: 738 MLGTIHRFHQDFAISVVDDLLESITFGLELNDFKFNQRRISEVKYLGELYIYRLVDSPLI 797
Query: 557 FSCLKACL--------------------DDFTHHNIDVACNLLETCGRFLYRSPETSIRM 596
F L L DD+ I + CNLLETCG + Y ++
Sbjct: 798 FDTLYKLLNYGWEGGYIRPGVYNPLDLPDDY--FRIRLVCNLLETCGMY-YDKGAAKKKL 854
Query: 597 ANMLEILMRLKNVKNLDPRHVT-LVENAYYLCKP-------PERSARV 636
L L +K P V +V++AY L +P PE ++R
Sbjct: 855 DFFLTFLQYYVCMKETLPMDVEFIVQDAYNLVRPQWKMITDPEEASRA 902
>gi|116196478|ref|XP_001224051.1| hypothetical protein CHGG_04837 [Chaetomium globosum CBS 148.51]
gi|88180750|gb|EAQ88218.1| hypothetical protein CHGG_04837 [Chaetomium globosum CBS 148.51]
Length = 1160
Score = 338 bits (866), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 171/384 (44%), Positives = 242/384 (63%), Gaps = 14/384 (3%)
Query: 403 EKDKEKAKDPDKEKGKEKDTERKVETEKEKLKGVE-----------GTNLDALLQRLPGC 451
E+ K+K D D++ GK+ D E K + G +DALL RLP
Sbjct: 416 EEVKKKKADADEQVGKKVDPAELAEAPKPADTAADNQSVAIANKTIGAQVDALLTRLPDL 475
Query: 452 VSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSM 511
++D IDQ ++FCYLNSK++R RLV+AL +VP+ +LLP + R+VATL M D+
Sbjct: 476 TTKDAIDQTAIDFCYLNSKASRNRLVKALTDVPKGRGDLLPCWGRLVATLGQYMTDIPKG 535
Query: 512 LIQMLEEEFNFLINKKDQMNI-ETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHH 570
L++ L+ EF L +K++ + + ++ NIR++ EL KF I P +VF CLK LDDF+
Sbjct: 536 LVEYLDAEFRSLQRRKEKEFLGQVRLSNIRYLAELTKFGIVPEHVVFHCLKVSLDDFSRM 595
Query: 571 NIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPP 630
NI++ CNLLE CGR+L R+PETS RM+ LE L R K+V+++ P L+ENA Y PP
Sbjct: 596 NIEIICNLLENCGRYLLRNPETSPRMSTFLETLQRKKSVQHIGPAERMLIENAVYYVDPP 655
Query: 631 ERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHK 688
+R A K R P+ +IRKL ++DL K + VLRQ+R+L W + E S L K F K K
Sbjct: 656 QRPAIEQKERTPMELFIRKLAYADLTKRNYSKVLRQIRRLHWEEKEVVSVLHKVFSKPGK 715
Query: 689 GKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGEL 748
K+G IHL+A L + ++RYH +F + V+D V+E I GLE ND+ QRR+A +++LGEL
Sbjct: 716 VKFGNIHLLAILLSAVNRYHPDFVIGVIDSVIESIAFGLEQNDFKSNQRRVAEVKYLGEL 775
Query: 749 YNYEHVDSSVIFDTLYLILVFGHG 772
YNY ++ VIFD +Y I+ FGHG
Sbjct: 776 YNYRMLEHPVIFDVMYKIMTFGHG 799
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 83/182 (45%), Gaps = 9/182 (4%)
Query: 194 FKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYR 253
F+ Y+ V+ L + ++ +NA+ GE+ E+ +++EK K+ + L
Sbjct: 283 FRNVLKRYFEDVKSHLVRDQKAIYSQSRKNAEAYVKSGEVFEDRQANFEKQVKAQERLVA 342
Query: 254 NVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASG---KDSSVPEPVWDDEETRAFYEC 310
N +++ + + P + + + +G +G + +W+DEE R FYE
Sbjct: 343 NAQIISDVIGAEMPDLKDSDDPSGGANGSIGIVKAGEYLRGQGDGSGIWEDEEERRFYEN 402
Query: 311 LPDLRAFVPAVLLGEAEHK---ANEPSVKPLEQPTDPASEPDQGQLAA--QDTAEVSADL 365
L DLR VP +LL E + K A+E K ++ P + A P AA Q A + +
Sbjct: 403 LVDLRGKVPGILLEEVKKKKADADEQVGKKVD-PAELAEAPKPADTAADNQSVAIANKTI 461
Query: 366 GA 367
GA
Sbjct: 462 GA 463
>gi|406866752|gb|EKD19791.1| MIF4G domain-containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1252
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 170/382 (44%), Positives = 246/382 (64%), Gaps = 12/382 (3%)
Query: 403 EKDKEKAKDPDKEKGKEKD-----TERKVETEKEKLKGVE----GTNLDALLQRLPGCVS 453
E K+K D D++ GK+ D TE + + + G +DALL RLP +
Sbjct: 429 EDGKKKKTDTDEQVGKKIDPADVTTEPTSSRDDDMSTAIANKTIGAQVDALLARLPDLTN 488
Query: 454 RDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLI 513
+DL+DQ ++FC+LNSK++R RLV+A+ +P+ +LLP YSR+VATL M D++ L+
Sbjct: 489 KDLVDQAAIDFCFLNSKASRNRLVKAVQEIPKGRSDLLPSYSRLVATLGKYMPDITKSLV 548
Query: 514 QMLEEEFNFLINKKDQMNI-ETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNI 572
L++EF L +K++ + + ++ NIR++ EL KF + P ++F CLK LDDF+ NI
Sbjct: 549 DHLDQEFRSLQRRKEKEFLGQARLGNIRYLAELTKFGVVPEHVIFHCLKVSLDDFSRMNI 608
Query: 573 DVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPER 632
++ CNLLE CGR+L R+P+TS RMA+ LE L R K+V+++ + L+ENA Y PP R
Sbjct: 609 EIICNLLENCGRYLLRNPDTSPRMASFLETLKRKKSVQHIGQQERMLIENAVYYVDPPVR 668
Query: 633 SARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWS--DCESYLLKCFMKVHKGK 690
+A K R P+ +IRKL++ D++ + +L+Q+R+L W D + L K F K K K
Sbjct: 669 AAIQQKERTPIDLFIRKLVYLDMNTRNYTKILKQIRRLHWEEVDVVAILEKVFSKPGKVK 728
Query: 691 YGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYN 750
YG IHL+A + + L RYH +F + V+D VLE I LGLE ND+ QRR+A +++LGELYN
Sbjct: 729 YGSIHLLAIIASALYRYHQQFVITVIDNVLESIILGLEQNDFKFNQRRIAELKYLGELYN 788
Query: 751 YEHVDSSVIFDTLYLILVFGHG 772
Y VD VIFDTLY IL FGHG
Sbjct: 789 YRMVDHPVIFDTLYRILTFGHG 810
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 88/197 (44%), Gaps = 27/197 (13%)
Query: 187 TADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRK 246
+A+ ++ F+ Y+ V+ L + ++ + ++A+ G++ E+ +SYEK+ K
Sbjct: 289 SAELQERFRNILKRYFEDVKGHLLRDQKAIGKQARKDAEAYVKSGQVFEDRQASYEKVVK 348
Query: 247 SYDHLYRNVSSLAEALDMQPPVMPED-------------VHTTRVTSGEDASPASGKDSS 293
S + L N LA+A+ + P + + V T GE
Sbjct: 349 SQERLIANAQVLADAIGGEMPDLKDSDDNAGAGNGGIGLVRTGEYLRGEGEGAG------ 402
Query: 294 VPEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHK---ANEPSVKPLEQPTDPASEPDQ 350
+W+D++ R FYE L DL+ VP +LL + + K +E K ++ P D +EP
Sbjct: 403 ----IWEDDDERRFYENLVDLKGKVPGMLLEDGKKKKTDTDEQVGKKID-PADVTTEPTS 457
Query: 351 GQLAAQDTAEVSADLGA 367
+ TA + +GA
Sbjct: 458 SRDDDMSTAIANKTIGA 474
>gi|367022786|ref|XP_003660678.1| hypothetical protein MYCTH_2299268 [Myceliophthora thermophila ATCC
42464]
gi|347007945|gb|AEO55433.1| hypothetical protein MYCTH_2299268 [Myceliophthora thermophila ATCC
42464]
Length = 1132
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 168/384 (43%), Positives = 243/384 (63%), Gaps = 14/384 (3%)
Query: 403 EKDKEKAKDPDKEKGKEKDTERKVETEKEKLKGVE-----------GTNLDALLQRLPGC 451
E+ K+K D D++ GK+ D + E K + G +DALL RLP
Sbjct: 416 EEVKKKKADADEQVGKKIDPSEQAEAPKPADTAADDQSVAIANKTIGAQVDALLSRLPDL 475
Query: 452 VSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSM 511
+++ DQ ++FCYLNSK++R RL++AL +VP+ +LLP ++R+VATL M D+
Sbjct: 476 TTKEAADQTAIDFCYLNSKASRNRLIKALTDVPKGRGDLLPCWARLVATLGQYMSDIPKG 535
Query: 512 LIQMLEEEFNFLINKKDQMNI-ETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHH 570
L++ L+ EF L +K++ + + ++ NIR++ EL KF I P +VF CLK LDDF+
Sbjct: 536 LVEYLDSEFRSLQRRKEKEFLGQVRLSNIRYLAELTKFGIVPEHVVFHCLKVSLDDFSRM 595
Query: 571 NIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPP 630
NI++ C+LLE CGR+L R+PETS RM+ LE L R K+V+++ P L+ENA Y PP
Sbjct: 596 NIEIICHLLENCGRYLLRNPETSPRMSTFLETLQRKKSVQHIGPAERMLIENAVYYVDPP 655
Query: 631 ERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHK 688
+R A K R P+ +IRKL +SDL K + VLRQ+R+L W + E + L K F + K
Sbjct: 656 QRPAIQQKERTPMELFIRKLAYSDLTKRNYSKVLRQIRRLHWEEKEVVAVLHKVFSRPDK 715
Query: 689 GKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGEL 748
K+G IHL+A L + L+RYH EF + V+D V+E I GLE ND+ QRR+A +++LGEL
Sbjct: 716 VKFGNIHLLAILLSALNRYHPEFVIGVIDSVIESIAFGLEQNDFKFNQRRIAEVKYLGEL 775
Query: 749 YNYEHVDSSVIFDTLYLILVFGHG 772
YNY ++ VIFD +Y I+ FGHG
Sbjct: 776 YNYRMLEHPVIFDVMYKIMTFGHG 799
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 85/182 (46%), Gaps = 9/182 (4%)
Query: 194 FKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYR 253
FK Y+ V+ L + ++ +NA+ GE+ E+ +S+EK K+ + L
Sbjct: 283 FKNVLKHYFEDVKGHLVRDQKAIYNQSRKNAEAYVKSGEVFEDRQASFEKQVKAQERLVA 342
Query: 254 NVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASG---KDSSVPEPVWDDEETRAFYEC 310
N +A+ + + P + + + +G +G + +W+DEE R FYE
Sbjct: 343 NAQVIADVIGAEMPDLKDSDDASGGANGSIGIVKAGEYLRGQGDGAGIWEDEEERRFYEN 402
Query: 311 LPDLRAFVPAVLLGEAEHK---ANEPSVKPLEQPTDPASEPDQGQLAAQDTAEVSAD--L 365
L DLR VP +LL E + K A+E K ++ P++ A P AA D + A+ +
Sbjct: 403 LVDLRGKVPNILLEEVKKKKADADEQVGKKID-PSEQAEAPKPADTAADDQSVAIANKTI 461
Query: 366 GA 367
GA
Sbjct: 462 GA 463
>gi|194897179|ref|XP_001978606.1| GG17588 [Drosophila erecta]
gi|190650255|gb|EDV47533.1| GG17588 [Drosophila erecta]
Length = 1249
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 231/733 (31%), Positives = 368/733 (50%), Gaps = 73/733 (9%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKK-------RSTLKLL 113
+ + S LH Y DF ++ K N+KA +K R L+L
Sbjct: 176 VTLASRLHCTYADFDVQFLEAWQKAL-------------NIKATEKIGNPSKLRVDLRLF 222
Query: 114 LELYFIGIIEDSSIFINIIKDLTSIEHL--KDRDTTQTNLTLLASFARQ-GRIFLGL--- 167
EL G+I+ + L HL +D+D +N +++ SF R G + GL
Sbjct: 223 AELVSSGVIQMKPGLAQLGVVLV---HLIAQDKDD-HSNFSIILSFCRHCGEEYAGLVPQ 278
Query: 168 PLSGPGQEIYEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKIL 227
+ + E K +TAD++ + Y+ A+ + + AE L M + +
Sbjct: 279 KMQQLATKYGVEVPKSDFLTADKQLNLRTMLKDYFKALCKHVLAEQGELMNMTKNIRRTM 338
Query: 228 NAKGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPA 287
KGE+S E E ++ +D L + SL+E L P + ++ E +P
Sbjct: 339 ECKGEISTEKREKCELMQAGFDKLLASAQSLSELLGEPLPELAKE--------SECCNPG 390
Query: 288 SGKDS-------SVPEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQ 340
+ D+ V +P W DEETR+FY LPDLR F+P A + ++ LE+
Sbjct: 391 TVIDNMLDSASFGVLDP-WGDEETRSFYTDLPDLRQFLP-------NFSAPKVDLETLEE 442
Query: 341 PTDPASEPDQGQLAAQDTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKD 400
P++ E + L A+ DL P S ++ E++ + P
Sbjct: 443 PSELTEEAIEANLDAE------MDLDDPPSTTSDSALENPSEEQLTTSVTP--------- 487
Query: 401 KEEKDKEKAKDPDKEKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQL 460
E+ +K + E G+++ ++ + + + D L L CV+++LID
Sbjct: 488 AEDVKPQKMGNALMELGRQQQSQ--LNQNPTQTQNQMRQQFDVFLVNLFNCVNKELIDSA 545
Query: 461 TVEFCY-LNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEE 519
+EF N+K RK+L R +F+V RT L++LPY SR VA + C DV++ L ++L +E
Sbjct: 546 AIEFLLNFNTKHQRKKLTRTIFSVQRTRLDILPYLSRFVAIVHMCNTDVAADLAELLRKE 605
Query: 520 FNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLL 579
F + I+KK+Q+NIE+K++ +RFIGEL KF + CLK L DF HH I++AC +
Sbjct: 606 FKWHIHKKNQLNIESKLKIVRFIGELVKFGLFKKFDALGCLKMLLRDFQHHQIEMACAFV 665
Query: 580 ETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKV 639
E G +LY + + M L+ ++RLK +D RH + +E+ YYL KPPE S R V
Sbjct: 666 EVSGVYLYNCRDARLLMNVFLDQMLRLKTATAMDSRHASQIESVYYLVKPPESSKREPAV 725
Query: 640 RPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCES--YLLKCFMKVHKGKYGQIHLI 697
RPP+H+YIR L+F +L K ++E ++ LR++ W D E+ Y +KC K + ++ + +
Sbjct: 726 RPPMHEYIRHLIFEELCKQNVERCIKMLRRIDWQDPETNCYAIKCLSKAYLLRFPLVRCL 785
Query: 698 ASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSS 757
A L +GLS Y V+D V E+IR GLE++ M QRR+A ++LGE+YNY+ V+S+
Sbjct: 786 ADLVSGLSSYQPRAVTIVIDNVFEDIRAGLEIHSPRMAQRRIAMAKYLGEMYNYKLVEST 845
Query: 758 VIFDTLYLILVFG 770
I +TLY I+ G
Sbjct: 846 HILNTLYSIISLG 858
>gi|303276689|ref|XP_003057638.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460295|gb|EEH57589.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 1323
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 156/333 (46%), Positives = 227/333 (68%), Gaps = 2/333 (0%)
Query: 441 LDALLQRLPGCVSRDLIDQLTVEFCYLNSK-SNRKRLVRALFNVPRTSLELLPYYSRMVA 499
+DALL RLP CV + D +++FCY+N+ S R+RLV L +VPR+ + LP+Y+R+ A
Sbjct: 558 VDALLLRLPKCVLKAEADAFSLDFCYVNATPSARRRLVYELVSVPRSETQRLPFYARIAA 617
Query: 500 TLSTCM-KDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFS 558
TLS KDV + + LEEEF +L K+DQ + E +++N RF+GE KF++ + + F
Sbjct: 618 TLSQVFTKDVGAPIAAALEEEFAYLKQKRDQGSCENRLKNARFLGECVKFRLVSSQVAFK 677
Query: 559 CLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVT 618
CLK+ L+DF+HHN++V C LLE+CGR+L +SP+T+ R + ML+I RLK+ KNLD R
Sbjct: 678 CLKSLLEDFSHHNVEVTCALLESCGRYLVKSPDTAQRASAMLDIFTRLKSAKNLDARTTR 737
Query: 619 LVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCESY 678
L ++AY C+PPE A+ K+RPP+H+Y+R L+F L + V+RQLRKL WS+ ESY
Sbjct: 738 LADSAYNACRPPEVVAKRGKIRPPVHEYVRHLVFIVLKPGTETVVVRQLRKLNWSEHESY 797
Query: 679 LLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRR 738
+LKC +K H+G++ L+A++ + + V VD VLE++R GLE+N M QRR
Sbjct: 798 VLKCLLKTHRGRHANASLVATVITTIGKTRQASLVKFVDAVLEDVRFGLEMNKPWMHQRR 857
Query: 739 LAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
+A +R LGELYN V S +IF+T YL++ FGH
Sbjct: 858 VATIRLLGELYNRGAVTSPIIFNTQYLLVSFGH 890
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 142/322 (44%), Gaps = 66/322 (20%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKS-------------------GEDLDADRNL 101
+ + S LHQ Y D S L + L + PG GED D +R+
Sbjct: 187 VAVASELHQTYADVSAALAEALPRYVCPGAKAFAPSAAAALAAAKAAAARGED-DGERDG 245
Query: 102 K----AMKKRSTLKLLLELYFIGIIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASF 157
K +++R L+ L EL +G++ + +++L+ KD + L+ F
Sbjct: 246 KEAPSPLQRRLKLRTLAELVLVGVVPSAGPAYKCVRELSKERWEKDPEGFAHALSAFGMF 305
Query: 158 ARQ-GRIFLGL-PLSG---------------------------PGQEIYEEFFKGLNITA 188
A+ G FLG+ P G E ++A
Sbjct: 306 AKAFGEEFLGIAPDRGKKKASTSAEDENGNGNGNGNGNGNEAAASTEEDAPDVGWFRLSA 365
Query: 189 DQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSY 248
+Q+ F F T+Y ++L +H +L +E ENA+ L GE++E +++Y +L+K+Y
Sbjct: 366 EQQNAFATVFRTFYVYAGDVLVEQHVALGALERENARALERTGEITEAATAAYAELKKTY 425
Query: 249 DHLYRNVSSLAEALDMQPPVMP-------EDVHTTRVTSGEDASPASGKDSSVPEPVWDD 301
+ L + V++L+EAL + P +P E + G D + SG + WDD
Sbjct: 426 ETLTKGVNALSEALRVPMPALPAMEAKEKESQGKVALQRGVDGADGSGGVN------WDD 479
Query: 302 EETRAFYECLPDLRAFVPAVLL 323
EE++ FYE LPDLRA VPA LL
Sbjct: 480 EESKLFYEDLPDLRAIVPAALL 501
>gi|336471758|gb|EGO59919.1| hypothetical protein NEUTE1DRAFT_129153 [Neurospora tetrasperma
FGSC 2508]
gi|350292874|gb|EGZ74069.1| ARM repeat-containing protein [Neurospora tetrasperma FGSC 2509]
Length = 1140
Score = 336 bits (861), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 162/338 (47%), Positives = 228/338 (67%), Gaps = 3/338 (0%)
Query: 438 GTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRM 497
G +DALL RLP +S+D IDQ+ ++FC+LNSK++R RL++AL +VP+ +LLP ++R+
Sbjct: 466 GAQVDALLVRLPELISKDAIDQMAIDFCFLNSKASRNRLIKALTDVPKGRTDLLPNWARL 525
Query: 498 VATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNI-ETKIRNIRFIGELCKFKIAPAGLV 556
VATL M D+ L+ L+ EF L +K++ + + ++ NIR++ EL KF I P +V
Sbjct: 526 VATLGQYMPDIPKGLVDYLDNEFRSLQRRKEKEFLGQVRLSNIRYLAELTKFGIVPEHVV 585
Query: 557 FSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRH 616
F CLK LDDF+ NI++ CNLLE CGR+L R+PETS RMA+ LE L R K+V+++
Sbjct: 586 FHCLKVSLDDFSRMNIEIICNLLENCGRYLLRNPETSPRMASFLETLQRKKSVQHIGQAE 645
Query: 617 VTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE 676
L+ENA Y PP+R A K R P+ +IRKL++ DL K + +LR +R+L W + E
Sbjct: 646 RMLIENAVYYVDPPQRPAIEVKERTPMELFIRKLIYGDLTKRNYSKILRHIRRLHWEEKE 705
Query: 677 --SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGM 734
+ L K F K K KYG IHL+A L + L +YH EF V V+D+V E I LGLE ND+
Sbjct: 706 VVAILHKVFSKPGKVKYGNIHLLAILLSALYKYHGEFVVGVIDQVTESICLGLESNDFKF 765
Query: 735 QQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHG 772
QRR+A +++LGELYNY ++ VIFDT+Y I+ FGHG
Sbjct: 766 NQRRIAEVKYLGELYNYRMLEHPVIFDTMYKIMTFGHG 803
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 65/139 (46%), Gaps = 4/139 (2%)
Query: 194 FKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYR 253
FK Y+ V+ L + ++ +NA+ GE+ E+ S++EK K+ + L
Sbjct: 288 FKNILKRYFEDVKGHLVRDQKAIYNQSRKNAEAYVKSGEVFEDRQSNFEKQVKAQERLVA 347
Query: 254 NVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASG---KDSSVPEPVWDDEETRAFYEC 310
N +A+ + + P + +D +G +G + +W+DEE R FYE
Sbjct: 348 NAQVIADIIGAEMPEL-KDTDEGNSANGTIGLVKAGEYLRGQGEGPGIWEDEEERRFYEN 406
Query: 311 LPDLRAFVPAVLLGEAEHK 329
L DL+ VP +LL E + K
Sbjct: 407 LVDLKGKVPGILLEEVKKK 425
>gi|164429230|ref|XP_961757.2| hypothetical protein NCU05267 [Neurospora crassa OR74A]
gi|157072990|gb|EAA32521.2| hypothetical protein NCU05267 [Neurospora crassa OR74A]
Length = 1140
Score = 336 bits (861), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 162/338 (47%), Positives = 227/338 (67%), Gaps = 3/338 (0%)
Query: 438 GTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRM 497
G +DALL RLP +S+D IDQ+ ++FC+LNSK++R RL++AL +VP+ +LLP ++R+
Sbjct: 466 GAQVDALLVRLPELISKDAIDQMAIDFCFLNSKASRNRLIKALTDVPKGRTDLLPNWARL 525
Query: 498 VATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNI-ETKIRNIRFIGELCKFKIAPAGLV 556
VATL M D+ L+ L+ EF L +K++ + + ++ NIR++ EL KF I P +V
Sbjct: 526 VATLGQYMPDIPKGLVDYLDNEFRSLQRRKEKEFLGQVRLSNIRYLAELTKFGIVPEHVV 585
Query: 557 FSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRH 616
F CLK LDDF+ NI++ CNLLE CGR+L R+PETS RMA+ LE L R K+V+++
Sbjct: 586 FHCLKVSLDDFSRMNIEIICNLLENCGRYLLRNPETSPRMASFLETLQRKKSVQHIGQAE 645
Query: 617 VTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWS--D 674
L+ENA Y PP+R A K R P+ +IRKL++ DL K + +LR +R+L W D
Sbjct: 646 RMLIENAVYYVDPPQRPAIEVKERTPMELFIRKLIYGDLTKRNYSKILRHIRRLHWEEKD 705
Query: 675 CESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGM 734
+ L K F K K KYG IHL+A L + L +YH EF V V+D+V E I LGLE ND+
Sbjct: 706 VVAILHKVFSKPGKVKYGNIHLLAILLSALYKYHGEFVVGVIDQVTESICLGLESNDFKF 765
Query: 735 QQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHG 772
QRR+A +++LGELYNY ++ VIFDT+Y I+ FGHG
Sbjct: 766 NQRRIAEVKYLGELYNYRMLEHPVIFDTMYKIMTFGHG 803
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 65/139 (46%), Gaps = 4/139 (2%)
Query: 194 FKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYR 253
FK Y+ V+ L + ++ +NA+ GE+ E+ S++EK K+ + L
Sbjct: 288 FKNILKRYFEDVKGHLVRDQKAIYNQSRKNAEAYVKSGEVFEDRQSNFEKQVKAQERLVA 347
Query: 254 NVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASG---KDSSVPEPVWDDEETRAFYEC 310
N +A+ + + P + +D +G +G + +W+DEE R FYE
Sbjct: 348 NAQVIADIIGAEMPEL-KDTDEGNAANGTIGLVKAGEYLRGQGEGPGIWEDEEERRFYEN 406
Query: 311 LPDLRAFVPAVLLGEAEHK 329
L DL+ VP +LL E + K
Sbjct: 407 LVDLKGKVPGILLEEVKKK 425
>gi|326469766|gb|EGD93775.1| nonsense-mediated mRNA decay protein 2 [Trichophyton tonsurans CBS
112818]
Length = 1181
Score = 335 bits (860), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 203/586 (34%), Positives = 303/586 (51%), Gaps = 67/586 (11%)
Query: 194 FKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYR 253
FK + Y V++ + + +L NA+ GE+ E+ S++EK K+++ L
Sbjct: 302 FKNVLNRYLEDVKKHVSRDQKALANQSRRNAEAYVKSGEILEDRQSNFEKQTKAHEKLVS 361
Query: 254 NVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASG---KDSSVPEPVWDDEETRAFYEC 310
N SL E L ++ P + E + SG +G + +W+DEE R FYE
Sbjct: 362 NTQSLCEILGVEMPDLAEKDASDGAMSGSIGLVKTGEYLRGQGEGAGIWEDEEERRFYEN 421
Query: 311 LPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTAEVSADLGASPE 370
L D + VPAVLL + + K A DQ ++ + A+PE
Sbjct: 422 LADFKGKVPAVLLEDGKKKK--------------ADGDDQSKVKPDAEGQNGT---AAPE 464
Query: 371 GKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEKDTERKVETEK 430
G S PD + A++P+ E+
Sbjct: 465 GTS----------------KPDSQAADSS---------AREPE-------------ESAT 486
Query: 431 EKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLEL 490
G +DALL +LP ++D +DQL ++FC+LNSK++R RLV+A+ VP+ +L
Sbjct: 487 TIANKSVGAQVDALLSKLPELANKDAVDQLALDFCFLNSKASRNRLVKAVQEVPKGRSDL 546
Query: 491 LPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNI-ETKIRNIRFIGELCKFK 549
LP Y+R+VATL + DV LI L++EF L +K + + + + NIR++ EL KF
Sbjct: 547 LPLYARLVATLGQYLPDVPQGLITYLDDEFRSLQRRKQKEFLGQVRTSNIRYLAELTKFG 606
Query: 550 IAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNV 609
+ P ++F C K LD+F+ NI++ NLLE CGR+L R+PET+ RMA+ LE L R K+
Sbjct: 607 VVPEHVIFHCFKVSLDEFSRMNIEIIGNLLENCGRYLLRNPETAPRMASFLETLGRKKSA 666
Query: 610 KNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRK 669
++L + ++ENA Y PP+R A K R P+ YIRKL++ D++K + +L+ +RK
Sbjct: 667 QHLGQQERMIIENAMYYVDPPQRPAIQQKERTPMELYIRKLIYLDMNKRNYTKILKAIRK 726
Query: 670 LPW----SDCESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRL 725
L W + C Y CF K G H A L RYH F + V+D VLE I +
Sbjct: 727 LHWEEPEASCYFYPSFCFFKDTNLVSGCQH----PRAALYRYHQSFVIGVIDNVLERITI 782
Query: 726 GLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
GLE ND+ Q R++ +++LGELYNY+ VDS VIFDTLY I+ +GH
Sbjct: 783 GLENNDFKFNQSRISEVKYLGELYNYKMVDSPVIFDTLYRIVTYGH 828
>gi|327303760|ref|XP_003236572.1| nonsense-mediated mRNA decay protein [Trichophyton rubrum CBS
118892]
gi|326461914|gb|EGD87367.1| nonsense-mediated mRNA decay protein [Trichophyton rubrum CBS
118892]
Length = 1180
Score = 335 bits (860), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 201/584 (34%), Positives = 308/584 (52%), Gaps = 61/584 (10%)
Query: 194 FKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYR 253
FK + Y V++ + + +L NA+ GE+ E+ S++EK K+++ L
Sbjct: 299 FKNVLNRYLEDVKKHVSRDQKALANQSRRNAEAYVKSGEILEDRQSNFEKQTKAHEKLVS 358
Query: 254 NVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASG---KDSSVPEPVWDDEETRAFYEC 310
N SL E L ++ P + E + SG +G + +W+DEE R FYE
Sbjct: 359 NTQSLCEILGVEMPDLAEKDASDGSMSGSIGLVKTGEYLRGQGEGAGIWEDEEERRFYEN 418
Query: 311 LPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTAEVSADLGASPE 370
L A+ K P+V LE + + + + A PE
Sbjct: 419 L--------------ADFKGKVPAVL-LED-----------GKKKKGDGDDQSKVKADPE 452
Query: 371 GKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEKDTERKVETEK 430
G++ + K +A D ++TE T
Sbjct: 453 GQNGTAALEGTSKPDSQAAD--------------------------SGVRETEESATTIA 486
Query: 431 EKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLEL 490
K G + +DALL +LP +++ +DQL ++FC+LNSK++R RL++A+ VP+ +L
Sbjct: 487 NKSVGAQ---VDALLSKLPELANKEAVDQLALDFCFLNSKASRNRLIKAVQEVPKGRSDL 543
Query: 491 LPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNI-ETKIRNIRFIGELCKFK 549
LP Y+R+VATL + DV LI L++EF L +K + + + + NIR++ EL KF
Sbjct: 544 LPLYARLVATLGQYLPDVPQGLITYLDDEFRSLQRRKQKEFLGQVRTSNIRYLAELTKFG 603
Query: 550 IAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNV 609
+ P ++F C K LD+F+ NI++ NLLE CGR+L R+PET+ RMA+ LE L R K+
Sbjct: 604 VVPEHVIFHCFKVSLDEFSRMNIEIIGNLLENCGRYLLRNPETAPRMASFLETLGRKKSA 663
Query: 610 KNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRK 669
++L + ++ENA Y PP R A K R P+ YIRKL++ D++K + +L+ +RK
Sbjct: 664 QHLGQQERMIIENAMYYVDPPPRPAIQQKERTPMELYIRKLIYLDMNKRNYTKILKAIRK 723
Query: 670 LPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGL 727
L W + E + L + F K K KYG IHL+A + + L RYH F + V+D VLE I +GL
Sbjct: 724 LHWEEPEVVNILERIFSKPGKIKYGNIHLLAIIISALYRYHQSFVIGVIDNVLERITIGL 783
Query: 728 ELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
E ND+ Q R++ +++LGELYNY+ VDS VIFDTLY I+ +GH
Sbjct: 784 ENNDFKFNQSRISEVKYLGELYNYKMVDSPVIFDTLYRIVTYGH 827
>gi|310792054|gb|EFQ27581.1| MIF4G domain-containing protein [Glomerella graminicola M1.001]
Length = 1161
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 173/393 (44%), Positives = 241/393 (61%), Gaps = 12/393 (3%)
Query: 387 KAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEKDTERKVETEKEKLKGVEGTNLDALLQ 446
K K PD E+ GK + D PD KG + + + + G +DA+L
Sbjct: 424 KKKKPDNEEQVGKKIDPADI-----PDAPKGPDAGEDLSTSIANKTI----GAQVDAVLA 474
Query: 447 RLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMK 506
RLP ++D+IDQ ++FCYLNSK++R RLV+AL VP+ +LLP +SR+ ATL M
Sbjct: 475 RLPDLTNKDVIDQAAIDFCYLNSKASRNRLVKALTEVPKGRGDLLPSWSRLAATLGRYMP 534
Query: 507 DVSSMLIQMLEEEFNFLINKKDQMNI-ETKIRNIRFIGELCKFKIAPAGLVFSCLKACLD 565
D+ L+ L+ EF L +KD+ + + ++ NIR++ EL KF I P +VF CLK LD
Sbjct: 535 DIPKGLVDYLDAEFRSLQRRKDKDFLGQVRLSNIRYLAELTKFGIVPEHVVFHCLKVSLD 594
Query: 566 DFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYY 625
DF+ NI++ CNLLE CGR+L R+PETS RMA LE L R K+V+++ L+ENA Y
Sbjct: 595 DFSRMNIEIICNLLENCGRYLLRNPETSPRMATFLETLQRKKSVQHIGQAERMLIENAVY 654
Query: 626 LCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE--SYLLKCF 683
PP+R A K R P+ +IRKL++ D+ K + +L+Q+R+L W + E L K F
Sbjct: 655 YVDPPDRPAIQQKERTPMELFIRKLIYMDMTKRNYSKILKQIRRLHWEEAEVVGILEKVF 714
Query: 684 MKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMR 743
K K KYG IHL+A L + L RYH F V V+D V+E I GLE ND+ QRR++ ++
Sbjct: 715 SKPGKVKYGNIHLLAILLSALYRYHPAFVVRVIDNVMESICFGLEQNDFKFYQRRISEVK 774
Query: 744 FLGELYNYEHVDSSVIFDTLYLILVFGHGTAET 776
++GELYNY V+ VIFDT+Y I+ FGHG T
Sbjct: 775 YIGELYNYRMVEHPVIFDTMYKIMTFGHGGPPT 807
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 87/183 (47%), Gaps = 12/183 (6%)
Query: 194 FKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYR 253
FK Y+ V+ + + S+ NA+ GE+ E+ +++EK K+ + L
Sbjct: 288 FKTILKKYFEDVKSHVLRDQKSIHSQARRNAEAYVKSGEVFEDRQANFEKQLKAQERLVA 347
Query: 254 NVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASG---KDSSVPEPVWDDEETRAFYEC 310
N ++A+A+ P + ++ + T+G +G + +W+DE+ R FYE
Sbjct: 348 NAQAIADAIGADMPDLKDNDDSLANTNGSIGLVKAGDYLRGLGDGAGIWEDEDERRFYEN 407
Query: 311 LPDLRAFVPAVLLGEAEHKA--NEPSVKPLEQPTDPASEPD--QGQLAAQD--TAEVSAD 364
L DL+ VP +LL + + K NE V + DPA PD +G A +D T+ +
Sbjct: 408 LVDLKGKVPGILLDDGKKKKPDNEEQVG---KKIDPADIPDAPKGPDAGEDLSTSIANKT 464
Query: 365 LGA 367
+GA
Sbjct: 465 IGA 467
>gi|307200450|gb|EFN80650.1| Regulator of nonsense transcripts 2 [Harpegnathos saltator]
Length = 1147
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 168/334 (50%), Positives = 227/334 (67%), Gaps = 4/334 (1%)
Query: 441 LDALLQRLPGCVSRDLIDQLTVEFCY-LNSKSNRKRLVRALFNVPRTSLELLPYYSRMVA 499
LDA L LP CV+R++ID V F LN+K N+K+LV+ALF V R L+LLP+YSR+ A
Sbjct: 432 LDAFLTHLPNCVNREMIDNAAVHFLMNLNTKHNKKKLVKALFGVSRIRLDLLPFYSRLAA 491
Query: 500 TLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSC 559
L + M DV + L QML+++F + + KKDQ+NIE+KI+ +R+IGEL KFK+ C
Sbjct: 492 ILYSVMPDVGNDLCQMLKQDFKYHVRKKDQINIESKIKVVRYIGELVKFKLYSKIEALYC 551
Query: 560 LKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTL 619
LK L DFTHH+I++ACNLLE CGR+L+ SP++ R LE +MR K V LD R+VT+
Sbjct: 552 LKVLLHDFTHHHIEMACNLLEICGRYLFCSPDSHQRTKVYLEQMMRKKAVTALDSRYVTI 611
Query: 620 VENAYYLCKPPERSARVSKV-RPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSD--CE 676
+ENAYY PPE + VSK RPP+H++IRKLL+ DL K++ + VLR +RKL W D
Sbjct: 612 IENAYYFVNPPESTGGVSKKDRPPIHEFIRKLLYQDLSKTNTDKVLRWMRKLDWEDESVS 671
Query: 677 SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQ 736
SY +KC + KY I + SL AGL +++ VVD VLE+IRL +E+N Q
Sbjct: 672 SYAIKCLTAAYNVKYLNIRCVGSLLAGLVGHYETIGPHVVDGVLEDIRLCMEVNLPKFNQ 731
Query: 737 RRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
RR+A +++LGELYNY V+S IF TLYL++ FG
Sbjct: 732 RRIAMVKYLGELYNYRMVESGDIFRTLYLLITFG 765
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 132/278 (47%), Gaps = 15/278 (5%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
+++CS LHQ Y +FS + ++ K G D+ K R L+ EL G
Sbjct: 123 IRVCSFLHQTYAEFSTHFFENWQRIL-SLKIG-----DKIANPSKLRVDLRFYAELVNAG 176
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGLPLSGPGQEIYEE 179
I + LT + ++ + N +++ SF R G + GL + +E+ E+
Sbjct: 177 IFTHKQGLPLLGSVLTVLINMDKEE--HNNASIILSFCRHCGEDYAGL-VPKKVRELSEK 233
Query: 180 FFKGLN----ITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSE 235
+ ++ D+++ + YYN++ + L EH L+ E +N KIL +GELS
Sbjct: 234 LTVAIPKSKLLSPDKQQNVRLLLRDYYNSLCKHLLKEHKDLQAFEKQNRKILQTRGELSS 293
Query: 236 ENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASGKDSSVP 295
E E L+ SY+ L +V S ++ LD P +P D + G+DS+V
Sbjct: 294 ERKEKLEALQVSYERLLSSVQSFSDTLDEPMPELPVDSEMKAEAEETLKMISEGEDSNVL 353
Query: 296 EPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEP 333
E +W DEETR FYE LPDL F+P L E+ KA+ P
Sbjct: 354 EDMWGDEETRRFYEVLPDLTVFLPGSYLKESP-KADAP 390
>gi|189235385|ref|XP_969534.2| PREDICTED: similar to conserved hypothetical protein [Tribolium
castaneum]
Length = 1125
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 174/364 (47%), Positives = 233/364 (64%), Gaps = 9/364 (2%)
Query: 413 DKEKGKEKDTERKVETEKEKLKGVEGTN---LDALLQRLPGCVSRDLIDQLTVEF-CYLN 468
D EK +E E E E +N L+A LP CV+R++ID ++F LN
Sbjct: 413 DDEKAEEAPV--AAEDEPEDSATTNASNKILLEAFFNNLPNCVNREMIDNAAIDFLVTLN 470
Query: 469 SKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKD 528
+K NRK+LVRALF V RT L+LLP+Y+R VA L + +V + L QML ++F + + KKD
Sbjct: 471 NKHNRKKLVRALFGVNRTRLDLLPFYARFVAILRPALPEVGNELCQMLRQDFKYHVRKKD 530
Query: 529 QMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYR 588
Q+NIE+KI+ +RFIGEL KFK+ CLK L DF+HH+I++ACNLLE CGRFLY
Sbjct: 531 QINIESKIKVVRFIGELVKFKLYSKIEALYCLKVLLYDFSHHHIEMACNLLEVCGRFLYC 590
Query: 589 SPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIR 648
SP++ R LE +MR K V LD R+VT +ENAYY PPE + K RP +HQ+IR
Sbjct: 591 SPDSHQRTRVYLEQMMRKKAVMALDSRYVTQIENAYYYVNPPEVTI-TKKERPIMHQFIR 649
Query: 649 KLLFSDLDKSSIEHVLRQLRKLPWS--DCESYLLKCFMKVHKGKYGQIHLIASLTAGLSR 706
KLLF DL K++ + ++R +RKL W D +Y +KC H KY I +A+L AGL
Sbjct: 650 KLLFQDLQKNNTDKIMRLIRKLDWGNEDVSAYAIKCLSSAHNVKYFNIRCLANLLAGLVT 709
Query: 707 YHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLI 766
Y +E VVD VLE+IRLG+E+N QRR+A +++LGELYNY V+S+ IF LY +
Sbjct: 710 YQEEVGTRVVDSVLEDIRLGMEVNLPKYNQRRVAQVKYLGELYNYRMVESADIFKVLYSL 769
Query: 767 LVFG 770
+ FG
Sbjct: 770 ITFG 773
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 153/325 (47%), Gaps = 29/325 (8%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
+K+CS+LHQ Y DFS L + K K GE + L R L+ EL G
Sbjct: 125 VKMCSVLHQTYADFSQHLFENWQKTL-AFKVGEKIPNPSKL-----RVDLRFYAELVQAG 178
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGLPLSGPGQEIYEE 179
+ + + F + +T++ ++ D+D N +++ SF + G + GL + +E+ E+
Sbjct: 179 VFSNKNAFTLLGTVITTLVNM-DKDE-HYNCSIILSFCKHCGEDYAGL-VPRKMRELSEK 235
Query: 180 FF----KGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSE 235
F K + ++++ + YY ++ + L +H ++ E +N +IL KGELS+
Sbjct: 236 FDIPIPKSTFLPPEKQQNVRTLLRDYYVSLSKHLVKDHQEIQNFEKQNMRILQTKGELSQ 295
Query: 236 ENSSSYEKLRKSYDHLYRNVSSLAEALDMQPP------VMPEDVHTTRVTSGEDASPASG 289
E E L+ SYD L + S AE LD P +M D +G D A+
Sbjct: 296 ERKDKLEALQTSYDKLLASTQSFAEILDEDMPTLKNQTLMKNDESMIVTGAGPDLDEAAL 355
Query: 290 KDSSVPEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPL---EQPTDPAS 346
+ E VW D ET+ FY LP+L+AF+P + + E + + E PT+
Sbjct: 356 ANI---ENVWCDIETQRFYCELPELQAFLPTSYINKQAPPPEESVTEEVLDSEIPTEELE 412
Query: 347 EPDQGQ---LAAQDTAEVSADLGAS 368
+ ++ + +AA+D E SA AS
Sbjct: 413 DDEKAEEAPVAAEDEPEDSATTNAS 437
>gi|270003595|gb|EFA00043.1| hypothetical protein TcasGA2_TC002851 [Tribolium castaneum]
Length = 1131
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 174/364 (47%), Positives = 233/364 (64%), Gaps = 9/364 (2%)
Query: 413 DKEKGKEKDTERKVETEKEKLKGVEGTN---LDALLQRLPGCVSRDLIDQLTVEF-CYLN 468
D EK +E E E E +N L+A LP CV+R++ID ++F LN
Sbjct: 419 DDEKAEEAPV--AAEDEPEDSATTNASNKILLEAFFNNLPNCVNREMIDNAAIDFLVTLN 476
Query: 469 SKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKD 528
+K NRK+LVRALF V RT L+LLP+Y+R VA L + +V + L QML ++F + + KKD
Sbjct: 477 NKHNRKKLVRALFGVNRTRLDLLPFYARFVAILRPALPEVGNELCQMLRQDFKYHVRKKD 536
Query: 529 QMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYR 588
Q+NIE+KI+ +RFIGEL KFK+ CLK L DF+HH+I++ACNLLE CGRFLY
Sbjct: 537 QINIESKIKVVRFIGELVKFKLYSKIEALYCLKVLLYDFSHHHIEMACNLLEVCGRFLYC 596
Query: 589 SPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIR 648
SP++ R LE +MR K V LD R+VT +ENAYY PPE + K RP +HQ+IR
Sbjct: 597 SPDSHQRTRVYLEQMMRKKAVMALDSRYVTQIENAYYYVNPPEVTI-TKKERPIMHQFIR 655
Query: 649 KLLFSDLDKSSIEHVLRQLRKLPWS--DCESYLLKCFMKVHKGKYGQIHLIASLTAGLSR 706
KLLF DL K++ + ++R +RKL W D +Y +KC H KY I +A+L AGL
Sbjct: 656 KLLFQDLQKNNTDKIMRLIRKLDWGNEDVSAYAIKCLSSAHNVKYFNIRCLANLLAGLVT 715
Query: 707 YHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLI 766
Y +E VVD VLE+IRLG+E+N QRR+A +++LGELYNY V+S+ IF LY +
Sbjct: 716 YQEEVGTRVVDSVLEDIRLGMEVNLPKYNQRRVAQVKYLGELYNYRMVESADIFKVLYSL 775
Query: 767 LVFG 770
+ FG
Sbjct: 776 ITFG 779
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 154/329 (46%), Gaps = 31/329 (9%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
+K+CS+LHQ Y DFS L + K K GE + L R L+ EL G
Sbjct: 125 VKMCSVLHQTYADFSQHLFENWQKTL-AFKVGEKIPNPSKL-----RVDLRFYAELVQAG 178
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGLPLSGPGQEIYEE 179
+ + + F + +T++ ++ D+D N +++ SF + G + GL + +E+ E+
Sbjct: 179 VFSNKNAFTLLGTVITTLVNM-DKDE-HYNCSIILSFCKHCGEDYAGL-VPRKMRELSEK 235
Query: 180 FF----KGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSE 235
F K + ++++ + YY ++ + L +H ++ E +N +IL KGELS+
Sbjct: 236 FDIPIPKSTFLPPEKQQNVRTLLRDYYVSLSKHLVKDHQEIQNFEKQNMRILQTKGELSQ 295
Query: 236 ENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPED----------VHTTRVTSGEDAS 285
E E L+ SYD L + S AE LD P + ++ + + +G
Sbjct: 296 ERKDKLEALQTSYDKLLASTQSFAEILDEDMPTLKNQTLMKNDEVALINWSMIVTGAGPD 355
Query: 286 PASGKDSSVPEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPL---EQPT 342
+++ E VW D ET+ FY LP+L+AF+P + + E + + E PT
Sbjct: 356 LDEAALANI-ENVWCDIETQRFYCELPELQAFLPTSYINKQAPPPEESVTEEVLDSEIPT 414
Query: 343 DPASEPDQGQ---LAAQDTAEVSADLGAS 368
+ + ++ + +AA+D E SA AS
Sbjct: 415 EELEDDEKAEEAPVAAEDEPEDSATTNAS 443
>gi|24640488|ref|NP_572434.1| Upf2 [Drosophila melanogaster]
gi|7290872|gb|AAF46314.1| Upf2 [Drosophila melanogaster]
gi|85857494|gb|ABC86283.1| RE04053p [Drosophila melanogaster]
Length = 1241
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 230/731 (31%), Positives = 363/731 (49%), Gaps = 67/731 (9%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKK-------RSTLKLL 113
+ + S LH Y DF ++ K N+KA +K R L+L
Sbjct: 159 VTLASRLHCTYADFDVHFLEAWQKAL-------------NIKATEKIGNPSKLRVDLRLF 205
Query: 114 LELYFIGIIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGL---PL 169
EL G+I+ + L + L D +N +++ SF R G + GL +
Sbjct: 206 AELVSSGVIQMKPGLAQLGVVLVHLIALDKDD--HSNFSIILSFCRHCGEEYAGLVPQKM 263
Query: 170 SGPGQEIYEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNA 229
+ E K +TAD++ + Y+ A+ + + AE L M + +
Sbjct: 264 QQLATKYGVEVPKSDFLTADKQLNLRTMLKGYFKALCKHVLAEQAELMNMTKNIRRTMEC 323
Query: 230 KGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASG 289
KGE+S E E ++ +D L + SL+E L P + ++ E +P +
Sbjct: 324 KGEISTEKREKCELMQAGFDKLLASAQSLSELLGEPLPELAKE--------SEGCNPGTV 375
Query: 290 KDS-------SVPEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPT 342
D+ V +P W DEETRAFY LPDLR F+P A + ++ LE+P+
Sbjct: 376 IDNMLDSASFGVLDP-WGDEETRAFYTDLPDLRQFLP-------NFSAPKVDLETLEEPS 427
Query: 343 DPASEPDQGQLAAQDTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKE 402
+ E L A+ DL P S ++ E++ P +D +
Sbjct: 428 ELTEEAIDANLDAE------MDLDDPPSTTSDTTPENPIEEQ------PTTPVAAAEDLK 475
Query: 403 EKDKEKAKDPDKEKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTV 462
+K + E G+++ + ++ +++ D L L CV+++LID +
Sbjct: 476 ---PQKMGNALMELGRQQQQQSQLNQNPIQIQNQMRQQFDGFLVNLFNCVNKELIDSAAI 532
Query: 463 EFCY-LNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFN 521
EF N+K RK+L R +F+V RT L++LPY SR VA + C DV++ L ++L +EF
Sbjct: 533 EFLLNFNTKHQRKKLTRTIFSVQRTRLDILPYLSRFVAIVHMCNTDVATDLAELLRKEFK 592
Query: 522 FLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLET 581
+ I+KK+Q+NIETK++ +RFIGEL KF + CLK L DF HH I++AC +E
Sbjct: 593 WHIHKKNQLNIETKLKIVRFIGELVKFGLFKKFDALGCLKMLLRDFQHHQIEMACAFVEV 652
Query: 582 CGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRP 641
G +LY + + M L+ ++RLK +D RH +E+ YYL KPPE S R VRP
Sbjct: 653 TGVYLYNCRDARLLMNVFLDQMLRLKTATAMDSRHAAQIESVYYLVKPPESSKREPMVRP 712
Query: 642 PLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCES--YLLKCFMKVHKGKYGQIHLIAS 699
+H+YIR L+F +L K +++ ++ LR++ W D E+ Y +KC K + ++ I +A
Sbjct: 713 AMHEYIRYLIFEELCKQNVDRCIKMLRRIDWQDPETNCYAIKCLSKAYLLRFQLIRCLAD 772
Query: 700 LTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVI 759
L +GLS Y V+D V E+IR GLE++ M QRR+A ++LGE+YNY+ V+S+ I
Sbjct: 773 LVSGLSSYQPRAVTIVIDNVFEDIRAGLEIHSPRMAQRRIAMAKYLGEMYNYKLVESTNI 832
Query: 760 FDTLYLILVFG 770
+TLY I+ G
Sbjct: 833 LNTLYSIISLG 843
>gi|319411911|emb|CBQ73954.1| related to NMD2-Nonsense-mediated mRNA decay protein 2 [Sporisorium
reilianum SRZ2]
Length = 1261
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 192/601 (31%), Positives = 306/601 (50%), Gaps = 70/601 (11%)
Query: 186 ITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLR 245
++++ + F K F TY+ + + EH L+ + +N + GE+ E+ +YE++
Sbjct: 285 VSSEWQAKFCKLFETYFQTLARRIVKEHQRLQDQDRKNHEAYIRSGEIFEDRQQNYERMT 344
Query: 246 KSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTS------GEDASPASGKDSSVPEPVW 299
KS++ + L+E L + P + + + A + ++ + + W
Sbjct: 345 KSFERVRDWGRILSELLGVPMPELESSTSNSNAVGLGVNLESKSAFERADEEFATDQSPW 404
Query: 300 DDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTA 359
+D++++ FY + DL +P +L AQ T
Sbjct: 405 EDQDSQKFYTDILDLGDIIPQSIL-------------------------------AQTTG 433
Query: 360 EVSADLGASPEGKSVEKGKDKEEKEKEKAKDPD-KEKGKGKDKEEKDKEKAKDPDKEKGK 418
V ++P+ E+ KD+ PD KE + D
Sbjct: 434 IVLDPNASAPKTDDAEEAKDR----------PDAKEATTATSSPQLD------------- 470
Query: 419 EKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVR 478
V+T E + L L+ +LP +R +ID V+F ++ +K R++LV+
Sbjct: 471 -------VDTPDEAMNAGPAAQLATLMAKLPDMTNRSMIDSAAVDFAFIATKPARRKLVK 523
Query: 479 ALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRN 538
L ++PR ++L PYY+R+ A L+ M DV + L +LE+EF +L KK+ ET+ +N
Sbjct: 524 HLASLPRNRIDLAPYYARLAAILTRYMPDVGAGLTALLEDEFRYLQRKKNVDLTETRAKN 583
Query: 539 IRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMAN 598
RF+ EL KFK+ P +F CLK CL+DF+ NIDV +LLE CGR+L R+ ET RM +
Sbjct: 584 ARFLSELTKFKVTPTHAIFHCLKVCLEDFSGPNIDVLASLLEGCGRYLLRTEETLARMRS 643
Query: 599 MLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKS 658
MLE+L R + +LD R + L+ NAYY C PP+R A K R P+ YIR L++ L K
Sbjct: 644 MLEMLRRKRAAAHLDSRQLLLLNNAYYQCNPPKRKAIEQKARQPMELYIRHLIYHVLQKR 703
Query: 659 SIEHVLRQLRKLPWSDCESY--LLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVV 716
+++ V+ QLRKLPW D Y L F + + +Y IHL+A L L R+H FAV V+
Sbjct: 704 TVDAVVLQLRKLPWDDVAVYGWLKDAFTRAWRIRYSNIHLLAILVYELERFHPAFAVEVI 763
Query: 717 DEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHGTAET 776
D+ LE IR+G+E N + QRR+A + +LGELYNY ++S ++F+ L+ + FGH A
Sbjct: 764 DQALENIRIGMEENIFKHNQRRVATICYLGELYNYRLINSGIVFEQLWSLATFGHPNARP 823
Query: 777 Y 777
+
Sbjct: 824 W 824
>gi|380493923|emb|CCF33528.1| MIF4G domain-containing protein [Colletotrichum higginsianum]
Length = 1220
Score = 332 bits (852), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 170/389 (43%), Positives = 240/389 (61%), Gaps = 12/389 (3%)
Query: 387 KAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEKDTERKVETEKEKLKGVEGTNLDALLQ 446
K K PD E+ GK + D PD K + ++ + + G +DA+L
Sbjct: 423 KKKKPDNEEQVGKKIDLADA-----PDAPKAPDVGEDQSTSIANKTI----GAQVDAVLA 473
Query: 447 RLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMK 506
RLP ++D+IDQ ++FCYLNSK++R RL++AL VP+ +LLP +SR+ ATL M
Sbjct: 474 RLPDLTNKDVIDQAAIDFCYLNSKASRNRLIKALTEVPKGRGDLLPSWSRLAATLGRYMP 533
Query: 507 DVSSMLIQMLEEEFNFLINKKDQMNI-ETKIRNIRFIGELCKFKIAPAGLVFSCLKACLD 565
D+ L+ L+ EF L +KD+ + + ++ NIR++ EL KF I P +VF CLK LD
Sbjct: 534 DIPKGLVDYLDAEFRSLQRRKDKDFLGQVRLSNIRYLAELTKFGIVPEHVVFHCLKVSLD 593
Query: 566 DFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYY 625
DF+ NI++ CNLLE CGR+L R+PETS RMA LE L R K+V+++ L+ENA Y
Sbjct: 594 DFSRMNIEIICNLLENCGRYLLRNPETSPRMATFLETLQRKKSVQHIGQAERMLIENAVY 653
Query: 626 LCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE--SYLLKCF 683
PP+R A K R P+ +IRKL++ D+ K + +L+Q+R+L W + E L K F
Sbjct: 654 YVDPPDRPAIQQKERTPMELFIRKLIYMDMTKRNYSKILKQIRRLHWEEAEVVGILEKVF 713
Query: 684 MKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMR 743
K K KYG IHL+A L + L RYH F V V+D V+E I GLE ND+ QRR++ ++
Sbjct: 714 SKPGKVKYGNIHLLAILLSALYRYHPAFVVRVIDNVMESICFGLEQNDFKFYQRRISEVK 773
Query: 744 FLGELYNYEHVDSSVIFDTLYLILVFGHG 772
++GELYNY V+ VIFDT+Y I+ FGHG
Sbjct: 774 YIGELYNYRMVEHPVIFDTMYKIMTFGHG 802
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 82/182 (45%), Gaps = 10/182 (5%)
Query: 194 FKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYR 253
FK Y+ V+ + + S+ NA+ GE+ E+ +++EK K+ + L
Sbjct: 287 FKTILKKYFEDVKSHVVRDQKSIHSQARRNAEAYVKSGEVFEDRQANFEKQLKAQERLVA 346
Query: 254 NVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASG---KDSSVPEPVWDDEETRAFYEC 310
N ++A+A+ P + E + T+G +G + +W+DE+ R FYE
Sbjct: 347 NAQAIADAIGADMPDLKESDDSLANTNGSIGLVKAGDYLRGLGDGAGIWEDEDERRFYEN 406
Query: 311 LPDLRAFVPAVLLGEAEHKA--NEPSVKP---LEQPTDPASEPDQGQLAAQDTAEVSADL 365
L DL+ VP +LL + + K NE V L D PD G+ Q T+ + +
Sbjct: 407 LVDLKGKVPGILLDDGKKKKPDNEEQVGKKIDLADAPDAPKAPDVGE--DQSTSIANKTI 464
Query: 366 GA 367
GA
Sbjct: 465 GA 466
>gi|195355787|ref|XP_002044369.1| GM11217 [Drosophila sechellia]
gi|194130687|gb|EDW52730.1| GM11217 [Drosophila sechellia]
Length = 1237
Score = 332 bits (852), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 229/735 (31%), Positives = 363/735 (49%), Gaps = 76/735 (10%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKK-------RSTLKLL 113
+ + S LH Y DF ++ K N+KA +K R L+L
Sbjct: 159 VTLASRLHCTYADFDVHFLEAWQKAL-------------NIKATEKIGNPSKLRVDLRLF 205
Query: 114 LELYFIGIIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGLP---- 168
EL G+I+ + L + + D +N +++ SF R G + GL
Sbjct: 206 AELISSGVIQMKPGLAQLGVVLVHLIAMDKDD--HSNFSIILSFCRHCGEEYAGLVPQKM 263
Query: 169 ---LSGPGQEIYEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAK 225
+ G E+ + F +TAD++ + Y+ A+ + + AE L M +
Sbjct: 264 QQLATKYGMEVPKSDF----LTADKQLNLRTMLKGYFKALCKHVLAEQAELMNMTKNIRR 319
Query: 226 ILNAKGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDAS 285
+ KGE+S E E ++ +D L + SL+E L P + ++ E +
Sbjct: 320 TMECKGEISTEKREKCELMQAGFDKLLASAQSLSELLGEPLPELAKE--------SEGCN 371
Query: 286 PASGKDS-------SVPEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPL 338
P D+ V +P W DEETRAFY LPDLR F+P A + ++ L
Sbjct: 372 PGIVIDNMLDSASFGVLDP-WGDEETRAFYTDLPDLRQFLP-------NFSAPKVDLETL 423
Query: 339 EQPTDPASEPDQGQLAAQDTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKG 398
E+P++ E L A+ DL P S ++ E++
Sbjct: 424 EEPSELTEEAIDANLDAE------MDLDDPPSTTSDTTPENPIEEQPTPVSS-------- 469
Query: 399 KDKEEKDKEKAKDPDKEKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLID 458
E+ +K + E G+++ + ++ +++ D L L CV+++LID
Sbjct: 470 --AEDLKPQKMGNALMELGRQQQQQSQLNQNPTQIQNQMRQQFDGFLVNLFNCVNKELID 527
Query: 459 QLTVEFCY-LNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLE 517
+EF N+K RK+L R +F+V RT L++LPY SR VA + C DV++ L ++L
Sbjct: 528 SAAIEFLLNFNTKHQRKKLTRTIFSVQRTRLDILPYLSRFVAIVHMCNTDVAADLAELLR 587
Query: 518 EEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACN 577
+EF + I+KK+Q+NIETK++ +RFIGEL KF + CLK L DF HH I++AC
Sbjct: 588 KEFKWHIHKKNQLNIETKLKIVRFIGELVKFGLFKKFDALGCLKMLLRDFQHHQIEMACA 647
Query: 578 LLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVS 637
+E G +LY + + M L+ ++RLK +D RH +E+ YYL KPPE S R +
Sbjct: 648 FVEVSGVYLYNCRDARLLMNVFLDQMLRLKTATAMDSRHAAQIESVYYLVKPPESSKREA 707
Query: 638 KVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCES--YLLKCFMKVHKGKYGQIH 695
VRP +H+YIR L+F +L K +++ ++ LR++ W D E+ Y +KC K + ++ I
Sbjct: 708 MVRPAMHEYIRYLIFEELCKQNVDRCIKMLRRIDWQDPETNCYAIKCLSKAYLLRFQLIR 767
Query: 696 LIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVD 755
+A L +GLS Y V+D V E+IR GLE++ M QRR+A ++LGE+YNY+ V+
Sbjct: 768 CLADLVSGLSSYQPRAVTIVIDNVFEDIRAGLEIHSPRMAQRRIAMAKYLGEMYNYKLVE 827
Query: 756 SSVIFDTLYLILVFG 770
S+ I +TLY I+ G
Sbjct: 828 STNILNTLYSIISLG 842
>gi|195565681|ref|XP_002106427.1| GD16133 [Drosophila simulans]
gi|194203803|gb|EDX17379.1| GD16133 [Drosophila simulans]
Length = 1237
Score = 332 bits (851), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 229/731 (31%), Positives = 363/731 (49%), Gaps = 68/731 (9%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKK-------RSTLKLL 113
+ + S LH Y DF ++ K N+KA +K R L+L
Sbjct: 159 VTLASRLHCTYADFDVHFLEAWQKAL-------------NIKATEKIGNPSKLRVDLRLF 205
Query: 114 LELYFIGIIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGL---PL 169
EL G+I+ + L + + D +N +++ SF R G + GL +
Sbjct: 206 AELISSGVIQMKPGLAQLGVVLVHLIAMDKDD--HSNFSIILSFCRHCGEEYAGLVPQKM 263
Query: 170 SGPGQEIYEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNA 229
+ E K +TAD++ + Y+ A+ + + AE L M + +
Sbjct: 264 QQLATKYGVEVPKSDFLTADKQLNLRTMLKGYFKALCKHVLAEQAELMNMTKNIRRTMEC 323
Query: 230 KGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASG 289
KGE+S E E ++ +D L + SL+E L +P +PE E +P +
Sbjct: 324 KGEISTEKREKCELMQAGFDKLLASAQSLSELL-CEP--LPE-----LAKESEGCNPGTV 375
Query: 290 KDS-------SVPEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPT 342
D+ V +P W DEETRAFY LPDLR F+P A + ++ LE+P+
Sbjct: 376 IDNMLDSASFGVLDP-WGDEETRAFYTDLPDLRQFLP-------NFSAPKVDLETLEEPS 427
Query: 343 DPASEPDQGQLAAQDTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKE 402
+ E L A+ DL P S ++ E++ E
Sbjct: 428 ELTEEAIDANLDAE------MDLDDPPSTTSDTTPENPIEEQPTPVSS----------AE 471
Query: 403 EKDKEKAKDPDKEKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTV 462
+ +K + E G+++ + ++ +++ D L L CV+++LID +
Sbjct: 472 DLKPQKMGNALMELGRQQQQQSQLNQNPTQIQNQMRQQFDGFLVNLFNCVNKELIDSAAI 531
Query: 463 EFCY-LNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFN 521
EF N+K RK+L R +F+V RT L++LPY SR VA + C DV++ L ++L +EF
Sbjct: 532 EFLLNFNTKHQRKKLTRTIFSVQRTRLDILPYLSRFVAIVHMCNTDVAADLAELLRKEFK 591
Query: 522 FLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLET 581
+ I+KK+Q+NIETK++ +RFIGEL KF + CLK L DF HH I++AC +E
Sbjct: 592 WHIHKKNQLNIETKLKIVRFIGELVKFGLFKKFDALGCLKMLLRDFQHHQIEMACAFVEV 651
Query: 582 CGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRP 641
G +LY + + M L+ ++RLK +D RH +E+ YYL KPPE + R + VRP
Sbjct: 652 SGVYLYNCRDARLLMNVFLDQMLRLKTATAMDSRHAAQIESVYYLVKPPESAKREAMVRP 711
Query: 642 PLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCES--YLLKCFMKVHKGKYGQIHLIAS 699
+H+YIR L+F +L K +++ ++ LR++ W D E+ Y +KC K + ++ I +A
Sbjct: 712 AMHEYIRYLIFEELCKQNVDRCIKMLRRIDWQDPETNCYAIKCLSKAYLLRFQLIRCLAD 771
Query: 700 LTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVI 759
L +GLS Y V+D V E+IR GLE++ M QRR+A ++LGE+YNY+ V+S+ I
Sbjct: 772 LVSGLSSYQPRAVTIVIDNVFEDIRAGLEIHSPRMAQRRIAMAKYLGEMYNYKLVESTHI 831
Query: 760 FDTLYLILVFG 770
+TLY I+ G
Sbjct: 832 LNTLYSIISLG 842
>gi|328778114|ref|XP_003249451.1| PREDICTED: regulator of nonsense transcripts 2 [Apis mellifera]
Length = 1149
Score = 332 bits (851), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 171/357 (47%), Positives = 235/357 (65%), Gaps = 5/357 (1%)
Query: 419 EKDTERKVETEKEKLKGVEGTNL-DALLQRLPGCVSRDLIDQLTVEFCY-LNSKSNRKRL 476
EK E + E E+ ++ + L DA + LP CV+R+LID V F LN+K N+K+L
Sbjct: 409 EKVDEPEAEVEEPQVSNISNKILLDAFITHLPNCVNRELIDNAAVHFLMNLNTKHNKKKL 468
Query: 477 VRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKI 536
V+ALF V R L+LLP+YSR+ A L M DV + L ML+ +F + + KKDQ+NIE+K+
Sbjct: 469 VKALFGVSRIRLDLLPFYSRLAAILYPVMSDVGNDLCSMLKHDFKYHVRKKDQINIESKV 528
Query: 537 RNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRM 596
+ +R+IGEL KFK+ CLK L DFTHH+I++ACNLLETCGR+L+ SP++ R
Sbjct: 529 KVVRYIGELVKFKLYSKIEALYCLKVLLHDFTHHHIEMACNLLETCGRYLFCSPDSHQRT 588
Query: 597 ANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKV-RPPLHQYIRKLLFSDL 655
LE +MR K V LD R+VT++ENAYY PPE + VSK RPP+H++IRKLL+ DL
Sbjct: 589 KVYLEQMMRKKAVTALDSRYVTIIENAYYYVNPPESTGGVSKKDRPPIHEFIRKLLYQDL 648
Query: 656 DKSSIEHVLRQLRKLPWSD--CESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAV 713
K++ + VL+ +RKL W D SY +KC + KY I + SL AGL +++
Sbjct: 649 SKTNTDKVLKWMRKLDWEDESVSSYAIKCLTAAYNVKYLNIRCVGSLLAGLVAHYETIGP 708
Query: 714 AVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
VVD VLE+IRL +E+N QRR+A +++LGELYNY V+S IF TLYL++ FG
Sbjct: 709 HVVDGVLEDIRLCMEINLPKFNQRRIAMVKYLGELYNYRMVESGDIFRTLYLLITFG 765
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 125/271 (46%), Gaps = 14/271 (5%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
+K+CS LHQ Y +FS + ++ D+ K R L+ EL G
Sbjct: 123 IKVCSFLHQTYAEFSTHFFENWQRILSLKV------VDKITNPSKLRVDLRFYAELVNAG 176
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGLPLSGPGQEIYEE 179
I + LT + ++ + N +++ SF + G + GL + +EI E+
Sbjct: 177 IFTHKQGLPLLGSALTVLINMDKEE--HNNASIILSFCKHCGEDYAGL-VPKKVREISEK 233
Query: 180 FF----KGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSE 235
K ++ D+++ + YYN++ + L EH L+ E +N KIL +GELS
Sbjct: 234 LNTTIPKSKLLSPDKQQNVRLLLRDYYNSLCKHLLKEHKDLQAFEKQNRKILQTRGELSS 293
Query: 236 ENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASGKDSSVP 295
E E L+ SYD L NV S ++ LD P +P D + G+++S+
Sbjct: 294 ERKEKLESLQVSYDRLLNNVQSFSDTLDEPMPELPIDSEMKAEAEESLKMISEGEENSIL 353
Query: 296 EPVWDDEETRAFYECLPDLRAFVPAVLLGEA 326
E +W DEETR FYE LPDL F+P L E
Sbjct: 354 EDMWGDEETRRFYEVLPDLTVFLPGSYLKEV 384
>gi|380027979|ref|XP_003697689.1| PREDICTED: regulator of nonsense transcripts 2-like [Apis florea]
Length = 1149
Score = 332 bits (851), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 171/357 (47%), Positives = 235/357 (65%), Gaps = 5/357 (1%)
Query: 419 EKDTERKVETEKEKLKGVEGTNL-DALLQRLPGCVSRDLIDQLTVEFCY-LNSKSNRKRL 476
EK E + E E+ ++ + L DA + LP CV+R+LID V F LN+K N+K+L
Sbjct: 409 EKVDEPEAEVEEPQVSNISNKILLDAFITHLPNCVNRELIDNAAVHFLMNLNTKHNKKKL 468
Query: 477 VRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKI 536
V+ALF V R L+LLP+YSR+ A L M DV + L ML+ +F + + KKDQ+NIE+K+
Sbjct: 469 VKALFGVSRIRLDLLPFYSRLAAILYPVMSDVGNDLCSMLKHDFKYHVRKKDQINIESKV 528
Query: 537 RNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRM 596
+ +R+IGEL KFK+ CLK L DFTHH+I++ACNLLETCGR+L+ SP++ R
Sbjct: 529 KVVRYIGELVKFKLYSKIEALYCLKVLLHDFTHHHIEMACNLLETCGRYLFCSPDSHQRT 588
Query: 597 ANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKV-RPPLHQYIRKLLFSDL 655
LE +MR K V LD R+VT++ENAYY PPE + VSK RPP+H++IRKLL+ DL
Sbjct: 589 KVYLEQMMRKKAVTALDSRYVTIIENAYYYVNPPESTGGVSKKDRPPIHEFIRKLLYQDL 648
Query: 656 DKSSIEHVLRQLRKLPWSD--CESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAV 713
K++ + VL+ +RKL W D SY +KC + KY I + SL AGL +++
Sbjct: 649 SKTNTDKVLKWMRKLDWEDESVSSYAIKCLTAAYNVKYLNIRCVGSLLAGLVAHYETIGP 708
Query: 714 AVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
VVD VLE+IRL +E+N QRR+A +++LGELYNY V+S IF TLYL++ FG
Sbjct: 709 HVVDGVLEDIRLCMEINLPKFNQRRIAMVKYLGELYNYRMVESGDIFRTLYLLITFG 765
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 125/271 (46%), Gaps = 14/271 (5%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
+K+CS LHQ Y +FS + ++ D+ K R L+ EL G
Sbjct: 123 IKVCSFLHQTYAEFSTHFFENWQRILSLKV------VDKITNPSKLRVDLRFYAELVNAG 176
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGLPLSGPGQEIYEE 179
I + LT + ++ + N +++ SF + G + GL + +EI E+
Sbjct: 177 IFTHKQGLPLLGSALTVLINMDKEE--HNNASIILSFCKHCGEDYAGL-VPKKVREISEK 233
Query: 180 FF----KGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSE 235
K ++ D+++ + YYN++ + L EH L+ E +N KIL +GELS
Sbjct: 234 LSTTIPKSKLLSPDKQQNVRLLLRDYYNSLCKHLLKEHKDLQAFEKQNRKILQTRGELSS 293
Query: 236 ENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASGKDSSVP 295
E E L+ SYD L NV S ++ LD P +P D + G+++S+
Sbjct: 294 ERKEKLESLQVSYDRLLNNVQSFSDTLDEPMPELPIDSEMKAEAEESLKMISEGEENSIL 353
Query: 296 EPVWDDEETRAFYECLPDLRAFVPAVLLGEA 326
E +W DEETR FYE LPDL F+P L E
Sbjct: 354 EDMWGDEETRRFYEVLPDLTVFLPGSYLKEV 384
>gi|440637608|gb|ELR07527.1| hypothetical protein GMDG_02618 [Geomyces destructans 20631-21]
Length = 1149
Score = 332 bits (850), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 157/338 (46%), Positives = 225/338 (66%), Gaps = 3/338 (0%)
Query: 438 GTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRM 497
G +DAL+ RLP ++DL+DQ ++FC+LNSK++R RL++A+ VP+ +LLPY+SR+
Sbjct: 478 GAQVDALIARLPDLTNKDLVDQAAIDFCFLNSKASRNRLIKAVQEVPKGRSDLLPYWSRL 537
Query: 498 VATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNI-ETKIRNIRFIGELCKFKIAPAGLV 556
++ L M D + L+ L+ EF L +K++ + + ++ NIR++ EL KF + P ++
Sbjct: 538 ISILGKYMPDTTKGLVDHLDMEFRSLQRRKEKDFLGQVRLSNIRYLAELTKFGVVPEHVI 597
Query: 557 FSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRH 616
F CLK LDDF+ NI++ CNLLE CGR+L+R+PETS RM + LE L R K+ +++ +
Sbjct: 598 FHCLKVSLDDFSRMNIEIICNLLENCGRYLFRNPETSPRMTSFLETLQRKKSAQHIGQQE 657
Query: 617 VTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE 676
L+ENA Y PP R+A + R P+ +IRKL++ D++K S VLRQ+RKL W + E
Sbjct: 658 RMLIENAVYYVDPPVRAAILQNERTPIDLFIRKLIYLDMNKKSYTKVLRQVRKLHWEEPE 717
Query: 677 --SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGM 734
L K F K K KYG IHL+A L + L RYH +F V+D+VLE I LGLE ND+
Sbjct: 718 VTKILEKVFSKPGKVKYGNIHLLAILVSALHRYHQDFVTTVIDDVLEYIMLGLEQNDFKY 777
Query: 735 QQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHG 772
QRRLA +++L ELYNY VD IFDT+Y I+ FGHG
Sbjct: 778 NQRRLAEVKYLAELYNYRMVDHPAIFDTMYKIMTFGHG 815
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 60/133 (45%), Gaps = 3/133 (2%)
Query: 194 FKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYR 253
F+ Y+ ++ + + +L +A+ G++ E+ ++YEK K D L
Sbjct: 296 FRNILRRYFEDLKAHIVRDQKTLASQARRDAEAYVKSGQVFEDRQANYEKQVKVQDRLVD 355
Query: 254 NVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASG---KDSSVPEPVWDDEETRAFYEC 310
N LA+A+ + P + + + G +G + +W+DEE R FYE
Sbjct: 356 NAQVLADAIGAEMPDLKDTEDSVAAFDGGIGLVKTGEYLRGQGDGAGIWEDEEERRFYEN 415
Query: 311 LPDLRAFVPAVLL 323
L DL+ VP +LL
Sbjct: 416 LVDLKGKVPGMLL 428
>gi|391330434|ref|XP_003739665.1| PREDICTED: regulator of nonsense transcripts 2-like [Metaseiulus
occidentalis]
Length = 1008
Score = 332 bits (850), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 244/754 (32%), Positives = 365/754 (48%), Gaps = 121/754 (16%)
Query: 35 ICKYIANIY--IYTYTLLLGLWLTLVYFLKICSLLHQRYKDFSPCLIDGLLKVFFPGKSG 92
+ KYI+ I I L L +LV ++CS LH Y DF+ CL+D K G G
Sbjct: 44 LSKYISEICQGIVEAKLKLSDVTSLV---QVCSKLHNEYGDFAQCLLDNFQKSI--GTQG 98
Query: 93 EDLDADRNLKAMKKRSTLKLLLELYFIGII---EDSSIFINIIKDLTSIEHLKDRDTTQT 149
+ K R L+L EL G+ E + ++++ +
Sbjct: 99 --------VNPAKARVDLRLTAELLLCGVFPLKEGFQVMKQFVQEMCNQSQQSLSSIISL 150
Query: 150 NLTLLASFARQGRIFLGLPLSGPGQEIYEEFFKGLNITADQKKIFKKAFHTYYNAVQELL 209
T L L PG EIY I D++K + Y+ ++
Sbjct: 151 CKTCGDEL---------LALGSPGIEIY--------IPIDKQKSLRTMIREYFKSIGRFA 193
Query: 210 QAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVM 269
EH G+L L+K Y + +N + PP +
Sbjct: 194 TREH-----------------GDLC--------TLQKQYRNAVQNKGA-------APPEL 221
Query: 270 PEDVHTTRVTSGEDASPASGKDSSVPEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHK 329
E + E A + K +S E + A +LGE +
Sbjct: 222 SEKL--------ESAQASFAKLTSSLEQL---------------------AAMLGETPPQ 252
Query: 330 ANEPSVKPLEQPTDPASEPDQGQLAAQDTAEVSADLGASPEGKSVEKGKDKEEKEKEKAK 389
EP +P Q +QDT +L P + + E KA
Sbjct: 253 FAEPE--------EPQETEGIVQGVSQDT-----ELSEEPLWEDADTQAFYENLPDLKAI 299
Query: 390 DPDKEKGKGKDKEEKDKE--KAKDPDKEKGKEKDTERKVETEKEKLKGVEGTNLDALLQR 447
P K KD+++ D E K+ P E E D + +V+ EKE LK LD+ L+
Sbjct: 300 MPAILKDNVKDEKDGDTEHEKSTSPAPEGDTENDEDVEVKAEKEMLKVETKPQLDSFLKE 359
Query: 448 LPGCVSRDLIDQLTVEFCY-LNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMK 506
L CV+RD IDQ+ +FC+ LN+++NR +L RALF VPRT L+LLP++ R+VA L M
Sbjct: 360 LLNCVNRDTIDQMAEKFCFNLNTRTNRYKLTRALFLVPRTRLDLLPFFGRLVAILKPVMP 419
Query: 507 DVSSMLIQMLEEEFNFLINKKDQMNIETKI-RNIRFIGELCKFKIAPAGLVFSCLKACLD 565
DV L +L ++F++ + KKDQMNIETK+ N RF+ EL KF++ PA CLK +
Sbjct: 420 DVGEELCTLLLKDFSYQLRKKDQMNIETKVSENCRFLAELTKFRVLPASEALHCLKRLIQ 479
Query: 566 DFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYY 625
DF+HH ID++C+L+E CGRFL+ P + + +++ ++R + V+NLDPRH +V+NA
Sbjct: 480 DFSHHTIDMSCHLVECCGRFLFLLPVSHGQTRALVDQMLRKRTVQNLDPRHQQMVDNACA 539
Query: 626 LC---KPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCESYL--- 679
+ P +V K +PPL +Y+RKLL+ DL K+S++ ++RQLRK+ W+D ES +
Sbjct: 540 VVTSITAPRAPIKVVK-KPPLERYLRKLLYQDLTKNSVDRIVRQLRKIDWTD-ESQMNLA 597
Query: 680 LKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRL 739
L K H+ +Y I +A+L A L+ Y D V+D V+E+IRLG+E+ND QRR+
Sbjct: 598 LSLLTKPHELRYYNIRALANLVAELATYQDAIGPRVLDAVVEDIRLGMEINDPKFNQRRV 657
Query: 740 AHMRFLGELYNYEHVDSSVIFDTLYLILVFGHGT 773
A + +LGELY+Y +S++IF LY ++ FG GT
Sbjct: 658 AAVHYLGELYDYRLSESALIFSVLYSLITFGAGT 691
>gi|429849263|gb|ELA24666.1| nonsense-mediated mrna decay factor [Colletotrichum gloeosporioides
Nara gc5]
Length = 1160
Score = 332 bits (850), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 171/390 (43%), Positives = 240/390 (61%), Gaps = 14/390 (3%)
Query: 387 KAKDPDKEKGKGKDKEEKDKEKA-KDPDKEKGKEKDTERKVETEKEKLKGVEGTNLDALL 445
K K PD E+ GK + + +A K PD + K G +DA+L
Sbjct: 423 KKKKPDSEEQVGKKIDPAEASEAPKVPDPSDDQSTAIANKTI----------GAQVDAVL 472
Query: 446 QRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCM 505
RLP ++D+IDQ ++FCYLNSK++R RL++AL VP+ +LLP ++R+ ATL M
Sbjct: 473 ARLPDLTNKDIIDQAAIDFCYLNSKASRNRLIKALTEVPKGRGDLLPSWARLAATLGRYM 532
Query: 506 KDVSSMLIQMLEEEFNFLINKKDQMNI-ETKIRNIRFIGELCKFKIAPAGLVFSCLKACL 564
D+ L+ L+ EF L +KD+ + + ++ NIR++ EL KF I P +VF CLK L
Sbjct: 533 PDIPKGLVDYLDAEFRSLQRRKDKDFLGQVRLSNIRYLAELTKFGIVPEHVVFHCLKVSL 592
Query: 565 DDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAY 624
DDF+ NI++ CNLLE CGR+L R+PETS RMA LE L R K+V+++ L+ENA
Sbjct: 593 DDFSRMNIEIICNLLENCGRYLLRNPETSPRMATFLETLQRKKSVQHIGQAERMLIENAV 652
Query: 625 YLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE--SYLLKC 682
Y PP+R A K R P+ +IRKL++ D+ K + +L+Q+R+L W + E S L K
Sbjct: 653 YYVDPPDRPAIQQKERNPMELFIRKLVYMDMTKRNYSKILKQIRRLHWEEAEVVSILEKV 712
Query: 683 FMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHM 742
F K K KYG IHL+A L + L RYH F V V+D V+E I GLE ND+ QRR++ +
Sbjct: 713 FSKPGKVKYGNIHLLAILLSALYRYHPAFVVRVIDNVMESISFGLEQNDFKFYQRRISEV 772
Query: 743 RFLGELYNYEHVDSSVIFDTLYLILVFGHG 772
+++GELYNY V+ VIFDT+Y I+ FGHG
Sbjct: 773 KYIGELYNYRMVEHPVIFDTMYKIMTFGHG 802
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 87/196 (44%), Gaps = 14/196 (7%)
Query: 189 DQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSY 248
D ++ FK Y+ V+ + + S+ NA+ GE+ E+ +++EK K+
Sbjct: 282 DLQEKFKTILKKYFEDVKNHVVRDQKSIHSQARRNAEAYVKSGEVFEDRQANFEKQVKAQ 341
Query: 249 DHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASG---KDSSVPEPVWDDEETR 305
+ L N ++A+A+ P + ++ + ++G +G + +W+DE+ R
Sbjct: 342 ERLVANAQAIADAIGADMPDLKDNDDSLGASNGSIGLVKAGEYLRGLGDGAGIWEDEDER 401
Query: 306 AFYECLPDLRAFVPAVLLGEAEHKANEP------SVKPL---EQPTDPASEPDQGQLAAQ 356
FYE L DL+ VP +LL + + K + + P E P P DQ A
Sbjct: 402 RFYENLVDLKGKVPGILLDDGKKKKPDSEEQVGKKIDPAEASEAPKVPDPSDDQSTAIAN 461
Query: 357 DT--AEVSADLGASPE 370
T A+V A L P+
Sbjct: 462 KTIGAQVDAVLARLPD 477
>gi|340710042|ref|XP_003393607.1| PREDICTED: regulator of nonsense transcripts 2-like [Bombus
terrestris]
Length = 1149
Score = 331 bits (849), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 172/363 (47%), Positives = 238/363 (65%), Gaps = 5/363 (1%)
Query: 413 DKEKGKEKDTERKVETEKEKLKGVEGTNL-DALLQRLPGCVSRDLIDQLTVEFCY-LNSK 470
D+ + EK E + E E+ ++ + L DA + LP CV+R+LID V F LN+K
Sbjct: 403 DELEETEKVDEPEAEVEEPQVSNISNKILLDAFITHLPNCVNRELIDNAAVHFLMNLNTK 462
Query: 471 SNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQM 530
N+K+LV+ALF V R L+LLP+YSR+ A L M DV + L ML+ +F + + KKDQ+
Sbjct: 463 HNKKKLVKALFGVSRIRLDLLPFYSRLAAILYPVMPDVGNDLCSMLKHDFKYHVRKKDQI 522
Query: 531 NIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSP 590
NIE+K++ +R+IGEL KFK+ CLK L DFTHH+I++ACNLLETCGR+L+ SP
Sbjct: 523 NIESKVKVVRYIGELVKFKLYSKIEALYCLKVLLHDFTHHHIEMACNLLETCGRYLFCSP 582
Query: 591 ETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKV-RPPLHQYIRK 649
++ R LE +MR K V LD R+VT++ENAYY PPE + VSK RPP+H++IRK
Sbjct: 583 DSHQRTKVYLEQMMRKKAVTALDSRYVTIIENAYYYVNPPESTGGVSKKDRPPIHEFIRK 642
Query: 650 LLFSDLDKSSIEHVLRQLRKLPWSD--CESYLLKCFMKVHKGKYGQIHLIASLTAGLSRY 707
LL+ DL K++ + VL+ +RKL W D SY +KC + KY I + SL AGL +
Sbjct: 643 LLYQDLSKTNTDKVLKWMRKLDWEDESVSSYAIKCLTAAYNVKYLNIRCVGSLLAGLVAH 702
Query: 708 HDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLIL 767
++ VVD VLE+IRL +E+N QRR+A +++LGELYNY V+S IF TLYL++
Sbjct: 703 YETIGPHVVDGVLEDIRLCMEINLPKFNQRRIAMVKYLGELYNYRMVESGDIFRTLYLLI 762
Query: 768 VFG 770
FG
Sbjct: 763 TFG 765
Score = 109 bits (272), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 132/275 (48%), Gaps = 22/275 (8%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
+K+CS LHQ Y +FS + ++ D+ K R L+ EL G
Sbjct: 123 IKVCSFLHQTYAEFSTHFFENWQRILSLKV------VDKIANPSKLRVDLRFYAELVNAG 176
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGLPLSGPGQEIYEE 179
I + LT + ++ + N +++ SF + G + GL +S +EI E+
Sbjct: 177 IFTHKQGLPLLGSALTVLINMDKEE--HNNASIILSFCKHCGEDYAGL-VSKRVREISEK 233
Query: 180 FFKGLNI------TADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGEL 233
G+ I + D+++ + YYN++ + L EH L+ E +N KIL +GEL
Sbjct: 234 L--GITIPKSKLLSPDKQQNVRLLLRDYYNSLCKHLLKEHKDLQAFEKQNRKILQTRGEL 291
Query: 234 SEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASP--ASGKD 291
S E E L+ SYD L NV S ++ LD P +P V++ E++ + G++
Sbjct: 292 SSERKEKLESLQVSYDRLLNNVQSFSDTLDEPMPELP--VNSEMKAEAEESLKMISEGEE 349
Query: 292 SSVPEPVWDDEETRAFYECLPDLRAFVPAVLLGEA 326
+S+ E +W DEETR FYE LPDL F+P L E
Sbjct: 350 NSILEDMWGDEETRRFYEVLPDLTVFLPGSYLKEV 384
>gi|350413622|ref|XP_003490056.1| PREDICTED: regulator of nonsense transcripts 2-like [Bombus
impatiens]
Length = 1149
Score = 331 bits (849), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 172/363 (47%), Positives = 238/363 (65%), Gaps = 5/363 (1%)
Query: 413 DKEKGKEKDTERKVETEKEKLKGVEGTNL-DALLQRLPGCVSRDLIDQLTVEFCY-LNSK 470
D+ + EK E + E E+ ++ + L DA + LP CV+R+LID V F LN+K
Sbjct: 403 DELEETEKVDEPEAEVEEPQVSNISNKILLDAFITHLPNCVNRELIDNAAVHFLMNLNTK 462
Query: 471 SNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQM 530
N+K+LV+ALF V R L+LLP+YSR+ A L M DV + L ML+ +F + + KKDQ+
Sbjct: 463 HNKKKLVKALFGVSRIRLDLLPFYSRLAAILYPVMPDVGNDLCSMLKHDFKYHVRKKDQI 522
Query: 531 NIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSP 590
NIE+K++ +R+IGEL KFK+ CLK L DFTHH+I++ACNLLETCGR+L+ SP
Sbjct: 523 NIESKVKVVRYIGELVKFKLYSKIEALYCLKVLLHDFTHHHIEMACNLLETCGRYLFCSP 582
Query: 591 ETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKV-RPPLHQYIRK 649
++ R LE +MR K V LD R+VT++ENAYY PPE + VSK RPP+H++IRK
Sbjct: 583 DSHQRTKVYLEQMMRKKAVTALDSRYVTIIENAYYYVNPPESTGGVSKKDRPPIHEFIRK 642
Query: 650 LLFSDLDKSSIEHVLRQLRKLPWSD--CESYLLKCFMKVHKGKYGQIHLIASLTAGLSRY 707
LL+ DL K++ + VL+ +RKL W D SY +KC + KY I + SL AGL +
Sbjct: 643 LLYQDLSKTNTDKVLKWMRKLDWEDESVSSYAIKCLTAAYNVKYLNIRCVGSLLAGLVAH 702
Query: 708 HDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLIL 767
++ VVD VLE+IRL +E+N QRR+A +++LGELYNY V+S IF TLYL++
Sbjct: 703 YETIGPHVVDGVLEDIRLCMEINLPKFNQRRIAMVKYLGELYNYRMVESGDIFRTLYLLI 762
Query: 768 VFG 770
FG
Sbjct: 763 TFG 765
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 131/273 (47%), Gaps = 18/273 (6%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
+K+CS LHQ Y +FS + ++ D+ K R L+ EL G
Sbjct: 123 IKVCSFLHQTYAEFSTHFFENWQRILSLKV------VDKIANPSKLRVDLRFYAELVNAG 176
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGLPLSGPGQEIYEE 179
I + LT + ++ + N +++ SF + G + GL +S +EI E+
Sbjct: 177 IFTHKQGLPLLGSALTVLINMDKEE--HNNASIILSFCKHCGEDYAGL-VSKRVREISEK 233
Query: 180 FF----KGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSE 235
K ++ D+++ + YYN++ + L EH L+ E +N KIL +GELS
Sbjct: 234 LSITIPKSKLLSPDKQQNVRLLLRDYYNSLCKHLLKEHKDLQAFEKQNRKILQTRGELSS 293
Query: 236 ENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASP--ASGKDSS 293
E E L+ SYD L NV S ++ LD P +P V++ E++ + G+++S
Sbjct: 294 ERKEKLESLQVSYDRLLNNVQSFSDTLDEPMPELP--VNSEMKAEAEESLKMISEGEENS 351
Query: 294 VPEPVWDDEETRAFYECLPDLRAFVPAVLLGEA 326
+ E +W DEETR FYE LPDL F+P L E
Sbjct: 352 ILEDMWGDEETRRFYEVLPDLTVFLPGSYLKEV 384
>gi|321260208|ref|XP_003194824.1| hypothetical protein CGB_F4560W [Cryptococcus gattii WM276]
gi|317461296|gb|ADV23037.1| conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 1129
Score = 331 bits (848), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 232/706 (32%), Positives = 366/706 (51%), Gaps = 58/706 (8%)
Query: 105 KKRSTLKLLLELYFIG-----IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFAR 159
K+R L+++ EL +G +++ ++ ++K L + D TNL L+ +F +
Sbjct: 150 KQRPVLRIVAELAMVGAWAEGVVKGAAEIGKVLKGLMT------GDPQYTNLPLITTFLK 203
Query: 160 Q-GRIFLG-LPLS---GP-------GQEIYEEFFKGLNITADQKKIFKKAFHTYYNAVQE 207
GR +LG P+S GP G E + L QK++++ F Y+N +
Sbjct: 204 YFGRAYLGDNPISSSQGPKDGAVKDGAETLPDGVTELVPPEVQKQMWQ-LFVNYFNTASK 262
Query: 208 LLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPP 267
L L + + N + GE+ E+ +YEK+ ++ + L V +LA+ L++ PP
Sbjct: 263 TLVKGQLKLLEQDKRNHEAYIKSGEIFEDRQQAYEKMTRAVERLTTGVQTLADLLNLTPP 322
Query: 268 VMPEDVHTTRVTSG----EDASPASGKDSS-VPEPVWDDEETRAFYECLPDLRAFVPAVL 322
+P ++ SG E +S + +D V +WDDEE + FY+ L DL+ VPA L
Sbjct: 323 TLPTAASLSK--SGLQIVESSSSFTVRDDGPVAGGIWDDEEEQKFYQDLVDLKEVVPASL 380
Query: 323 L--------------GEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTAEVSADLGAS 368
L GE++ K+ E E E + QL + A+ A +
Sbjct: 381 LGIKEKSKEDDQEGGGESQDKSEEEE----ENQQKAEEEALRKQLEQMELADSQAQPESE 436
Query: 369 PEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEKDTERKVET 428
PE + + + + + D EE+ + +D
Sbjct: 437 PEPEPQSQLQTLDRPASSSSLD-----SVAVAHEEEAQVHVEDEQAATVPMTTAATTAAI 491
Query: 429 EKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSL 488
E++ L+ L AL LP +R+++D+L VEF +LNSK+ RKRL++ L VP+
Sbjct: 492 EEDGLQSGPAARLSALFAALPESNNREVVDKLAVEFAFLNSKAARKRLIKFLGEVPKQRT 551
Query: 489 ELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIE-TKIRNIRFIGELCK 547
+LLP+Y+R++ATL+ M DV + ++++L+EE +L KK ++ T+++N+RF GEL K
Sbjct: 552 DLLPHYARLIATLNPYMPDVGAGILEILDEELRYLQRKKLVRELDSTRLKNVRFYGELAK 611
Query: 548 FKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLK 607
FK+A + LK LDDF NI+ NLLETCGRFL R T+ M+E++ + +
Sbjct: 612 FKVAKPFNILHVLKVFLDDF-KFNIENISNLLETCGRFLLRYEGTAEVAKRMVELMRKKQ 670
Query: 608 NVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQL 667
+LD RH ++ENA+Y+C PPER R P+ +IR LL L K + + VL+ L
Sbjct: 671 ANMHLDQRHQLMLENAFYMCNPPERVVREVVQLTPMQSFIRHLLDEVLMKRTRDKVLKLL 730
Query: 668 RKLPWSDCESY--LLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRL 725
RKL W E Y +L F V + K+G I +A L L R+H EF +AVVD+VLE IR+
Sbjct: 731 RKLHWEHPEVYDFILSAFTNVWEVKFGNIPQLADLVFDLQRWHPEFGIAVVDQVLENIRI 790
Query: 726 GLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
LE N + QRR+A M+++GELY Y +++SVIF+ L+ +L FGH
Sbjct: 791 DLEENIFKFNQRRIATMKYVGELYMYRVINASVIFEILWSLLSFGH 836
>gi|198426446|ref|XP_002121212.1| PREDICTED: similar to UPF2 regulator of nonsense transcripts
homolog (yeast), partial [Ciona intestinalis]
Length = 766
Score = 331 bits (848), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 231/700 (33%), Positives = 359/700 (51%), Gaps = 99/700 (14%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKK-RSTLKLLLELYFI 119
+ CSL+H RY++F+P L ++F +S D D + + M K R+ L+ + EL
Sbjct: 134 VHFCSLMHMRYQEFTPQLFQSTKRLF---QSRID-DKNSFINNMGKVRTDLRFVSELTVA 189
Query: 120 GIIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQGRIFLGLPLSGPGQEIYEE 179
GI D + L I ++ DR+ +++ G GL + + + ++
Sbjct: 190 GIFTDKEGLTLVHSQLREILNV-DRERHDLLSVVISLCKHNGEDVAGL-VPRKNRSLGDK 247
Query: 180 FFKGLNI------TADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGEL 233
F G+ + +++KIF Y+N+V + L H L+ ++ N IL +KGEL
Sbjct: 248 F--GIQLPRSEIFAPEKQKIFYTVLSDYWNSVHDHLLQMHKELQSIDRRNRHILQSKGEL 305
Query: 234 SEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASP------- 286
EE S Y + +Y L + + LA+ LD+ P +PE V V GE SP
Sbjct: 306 HEEKSKEYTDKQAAYTKLLISCNQLADLLDVDVPDLPETVEL--VQDGE--SPINIFEPG 361
Query: 287 ASGKDSSVPEPVWDDEETRAFYECLPDLRAFVPAVL---LGEAEHKANEPSVKPLEQPTD 343
+SG + + VW+DE+ R+FY L DL+A VPA+L +G+ +K+ + +
Sbjct: 362 SSGAELLGEQSVWEDEDQRSFYSNLLDLKAIVPAILFKDVGKGSNKSERGGGRRPGKGKH 421
Query: 344 PASEP--------DQGQLAAQDTAE--VSADLGASPEGK--SVEKGKDKEEKEKEKAKDP 391
PA+EP +G+LAA++ + D+G+ E + +V++ + + A
Sbjct: 422 PANEPKPLGPKLGGKGELAAEELERDLTNLDIGSLEESELAAVQEAMEAGARVTSGAGAE 481
Query: 392 DKEKGKGKDKEEKDKEKAKDPDKEKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGC 451
+ G+ E+ DK+ E DTE +K + L+ + L C
Sbjct: 482 VEVVETGESDEDVDKDAM-------SMEDDTEDDDVNIGASMKII----LENFISSLKNC 530
Query: 452 VSRDLIDQLTVEFCY-LNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSS 510
V+RDL+D+ +FC +N+++NRKRL RALFNV R+ L+LLP+Y+R+ ATL++C+ DVS
Sbjct: 531 VNRDLVDKAAQDFCMNMNTRANRKRLARALFNVHRSRLDLLPFYARLAATLNSCIPDVSE 590
Query: 511 MLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHH 570
L ML +F F + K+DQ++IE+K++ +RFIGE+ KF + P +CLK
Sbjct: 591 HLSLMLLRDFRFHVRKRDQIHIESKVKTVRFIGEMTKFGMIPTTDALACLKXXXXXXXXQ 650
Query: 571 NIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPP 630
R+ T+++NA Y C PP
Sbjct: 651 --------------------------------------------RYSTMIDNARYACDPP 666
Query: 631 ERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHK 688
+ A V KVRPPLHQYIRKLLF +L KS++E +LRQ+RKLPW+D E SYL+KC +
Sbjct: 667 KTEAVVMKVRPPLHQYIRKLLFRELSKSTVEKILRQIRKLPWNDKEIRSYLVKCLSQSWN 726
Query: 689 GKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLE 728
K+ +H +ASL AGL YHDE VVD+VLE+IR+G+E
Sbjct: 727 IKFNNVHCLASLLAGLIAYHDEVGHHVVDDVLEDIRVGME 766
>gi|383859917|ref|XP_003705438.1| PREDICTED: regulator of nonsense transcripts 2-like [Megachile
rotundata]
Length = 1148
Score = 331 bits (848), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 171/362 (47%), Positives = 237/362 (65%), Gaps = 4/362 (1%)
Query: 413 DKEKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCY-LNSKS 471
D+ + EK E + E E+ ++ LDA L LP CV+R++ID V F LN+K
Sbjct: 403 DELEETEKVDEPEAEVEEPQVSKSNKILLDAFLAHLPNCVNREMIDNAAVHFLMNLNTKH 462
Query: 472 NRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMN 531
++K+LV+ALF V R L+LLP+YSR+ A L M DV + L ML+ +F + + KKDQ+N
Sbjct: 463 HKKKLVKALFGVSRIRLDLLPFYSRLAAILYPVMPDVGNDLCSMLKHDFKYHVRKKDQIN 522
Query: 532 IETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPE 591
IE+K++ +R+IGEL KFK+ CLK L DFTHH+I++ACNLLETCGR+L+ SP+
Sbjct: 523 IESKVKVVRYIGELVKFKLYSKIEALYCLKVLLHDFTHHHIEMACNLLETCGRYLFCSPD 582
Query: 592 TSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVS-KVRPPLHQYIRKL 650
+ R LE +MR K V LD R+VT++ENAYY PPE + VS K RPP+H++IRKL
Sbjct: 583 SHQRTKVYLEQMMRKKAVTALDSRYVTIIENAYYFVNPPESTGGVSRKDRPPIHEFIRKL 642
Query: 651 LFSDLDKSSIEHVLRQLRKLPWSD--CESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYH 708
L+ DL K++ + VL+ +RKL W D SY +KC + KY I + SL AGL ++
Sbjct: 643 LYQDLSKTNTDKVLKWMRKLDWEDESVSSYAIKCLTAAYNVKYLNIRCVGSLLAGLVAHY 702
Query: 709 DEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILV 768
+ VVD VLE+IRL +E+N QRR+A +++LGELYNY V+S IF TLYL++
Sbjct: 703 ETIGPHVVDGVLEDIRLCMEINLPKYNQRRIAMVKYLGELYNYRMVESGDIFRTLYLLIT 762
Query: 769 FG 770
FG
Sbjct: 763 FG 764
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 125/271 (46%), Gaps = 14/271 (5%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
+K+CS LHQ Y +FS + ++ D+ K R L+ EL G
Sbjct: 123 IKVCSFLHQTYVEFSTHFFENWQRILSLKV------VDKIANPSKLRVDLRFYAELVNAG 176
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGLPLSGPGQEIYE- 178
I + LT + ++ + N +++ SF + G + GL + +EI E
Sbjct: 177 IFTHKQGLPLLGSALTVLINMDKEE--HNNASIILSFCKHCGEDYAGL-VPKKVREISEK 233
Query: 179 ---EFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSE 235
+ K ++ D+++ + YYN++ + L EH L+ E +N KIL +GELS
Sbjct: 234 LNIQIPKSKLLSPDKQQNVRLLLRDYYNSLCKHLLKEHKDLQAFEKQNRKILQTRGELSS 293
Query: 236 ENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASGKDSSVP 295
E E L+ SY+ L NV S +E LD P +P D + G+++S+
Sbjct: 294 ERKEKLESLQVSYERLLNNVQSFSETLDEPMPELPVDSEMKAEAEETMKMISEGEENSIL 353
Query: 296 EPVWDDEETRAFYECLPDLRAFVPAVLLGEA 326
E +W DEETR FYE LPDL F+P L E
Sbjct: 354 EDMWGDEETRRFYEVLPDLTVFLPGSYLKEV 384
>gi|378727106|gb|EHY53565.1| hypothetical protein HMPREF1120_01754 [Exophiala dermatitidis
NIH/UT8656]
Length = 1130
Score = 330 bits (847), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 167/377 (44%), Positives = 245/377 (64%), Gaps = 7/377 (1%)
Query: 401 KEEKDKEKAKDPDK---EKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLI 457
K++ + ++ DP E G K +E +T K V G +DALL RLP ++D++
Sbjct: 425 KKKSESDERTDPSAAATENGAGKPSENDDQTTAIANKTV-GAQVDALLLRLPELQTKDMV 483
Query: 458 DQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLE 517
DQ+ ++FC+LNSK++R RL +AL ++PR +LLP+Y+R+ ATL M D+ L+ L+
Sbjct: 484 DQVALDFCFLNSKASRNRLSKALQDIPRGRTDLLPFYARLAATLGQYMPDIVQGLVAHLD 543
Query: 518 EEFNFLINKKDQMNI-ETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVAC 576
EEF L +K + + + ++ NIR++ EL KF + P ++F CLK LDDF+ NI++
Sbjct: 544 EEFRSLQRRKTKDFLGQARLMNIRYLAELTKFGVVPEHVIFHCLKVSLDDFSRMNIEIIA 603
Query: 577 NLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARV 636
+LLE CGR+L RSPET+ RMA+ LE L R K+ +++ + L+ENA Y PP+R+A
Sbjct: 604 HLLENCGRYLLRSPETAPRMASFLETLSRKKSAQHMGAQERMLIENALYYVDPPQRAAIQ 663
Query: 637 SKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQI 694
K R P+ ++R+L++ DL K + VL+ LRKL W + E L K F K K KY I
Sbjct: 664 QKERTPVELFVRQLIYVDLTKRNYMKVLKTLRKLHWEEKEVVDLLEKIFSKPGKVKYSNI 723
Query: 695 HLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHV 754
HL+A L GL RYH +FA+ +D +LE+I LGLE ND+ QRR+A +++LGELYNY+ +
Sbjct: 724 HLLAVLLQGLFRYHQDFAIGAIDNILEQITLGLEQNDFKFNQRRIAEVKYLGELYNYKMI 783
Query: 755 DSSVIFDTLYLILVFGH 771
DS+VIFDTLY I+ FGH
Sbjct: 784 DSTVIFDTLYRIVTFGH 800
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 80/185 (43%), Gaps = 13/185 (7%)
Query: 191 KKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDH 250
++ F Y +V+ + L NA+ GE+ E+ ++YEK K+ +
Sbjct: 286 RQRFINVLDRYLGSVKSHVIRNQKLLTSQGRRNAEAYVKSGEIFEDRQANYEKQLKAQEK 345
Query: 251 LYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASG---KDSSVPEPVWDDEETRAF 307
L L + L + P + E + T+ +G K S+ +W+DE+ R F
Sbjct: 346 LVAGAQVLCDVLGQEMPELAEQENADNATASGVGMIKTGDYLKGSAEGAGIWEDEDERRF 405
Query: 308 YECLPDLRAFVPAVLLGEAEHKA-----NEPSVKPLEQPTDPASEPDQGQLAAQDTAEVS 362
YE L DL+ VP++LL +A+ K+ +PS E SE D Q TA +
Sbjct: 406 YENLMDLKGRVPSILLEDAKKKSESDERTDPSAAATENGAGKPSENDD-----QTTAIAN 460
Query: 363 ADLGA 367
+GA
Sbjct: 461 KTVGA 465
>gi|408391280|gb|EKJ70660.1| hypothetical protein FPSE_09170 [Fusarium pseudograminearum CS3096]
Length = 1118
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 166/383 (43%), Positives = 241/383 (62%), Gaps = 13/383 (3%)
Query: 403 EKDKEKAKDPDKEKGKEKDTERKVETEKEKLKGVE----------GTNLDALLQRLPGCV 452
E K+K D D++ GK+ D +ET K + G +DALL RLP
Sbjct: 416 EDGKKKKTDTDEQVGKKLDPAEVIETTKTAETADDQSTSIANRTIGAQVDALLARLPELT 475
Query: 453 SRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSML 512
++D++DQ ++FC+LNSK++R RLV+AL VP+ +LLP +SR+VATL M DV L
Sbjct: 476 NKDIVDQTAIDFCFLNSKASRNRLVKALTEVPKGRSDLLPSWSRLVATLGRYMPDVPKGL 535
Query: 513 IQMLEEEFNFLINKKDQMNI-ETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHN 571
+ L+ EF L +K++ + + ++ NIR++ EL KF I P +VF CLK LDDF+ N
Sbjct: 536 VDYLDAEFRSLQRRKEKDFLGQVRLSNIRYLAELTKFGIVPEHVVFHCLKVSLDDFSRMN 595
Query: 572 IDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPE 631
I++ CNL+E CGR+L R+PET+ RM + LE L R K+V+++ L++NA Y PPE
Sbjct: 596 IEILCNLIENCGRYLLRNPETAPRMMSFLETLQRKKSVQHIGQPERMLIDNAVYYVDPPE 655
Query: 632 RSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKG 689
RSA K R P+ ++RKL++ D+ K + +L+Q+R+L W + E + L K F K K
Sbjct: 656 RSAIEQKERTPMELFVRKLIYVDMTKRNYSKILKQIRRLHWEEAEVVAILEKVFSKPGKV 715
Query: 690 KYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELY 749
KYG +HL+ L + L RYH F V V+D V+E + GLE NDY QRR+A +++LGELY
Sbjct: 716 KYGSVHLLGILLSALYRYHPAFVVRVIDNVIESMTFGLEQNDYRFYQRRIAEVKYLGELY 775
Query: 750 NYEHVDSSVIFDTLYLILVFGHG 772
NY ++ VIFDT+Y I+ FG+G
Sbjct: 776 NYRMLEHPVIFDTMYKIMTFGYG 798
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 88/184 (47%), Gaps = 9/184 (4%)
Query: 194 FKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYR 253
F+ Y++ V+ + + S++ NA+ GE+ E+ ++YEK K+ + L
Sbjct: 283 FRSILKKYFDDVKGHIIRDQKSIQSQARRNAEAYVKSGEVFEDRQANYEKQVKAQERLVS 342
Query: 254 NVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASG---KDSSVPEPVWDDEETRAFYEC 310
N +A+A+ ++ P + + + ++G +G + +W+D++ R FYE
Sbjct: 343 NAQVVADAIGVEMPDLKDSDDSLAASNGSIGLVKTGDYLRSMGDGAGIWEDDDERRFYEN 402
Query: 311 LPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTAEVSADLGASPE 370
L DL+ VPA+LL + + K + + + + + DPA + TAE + D S
Sbjct: 403 LVDLKGKVPAILLEDGKKKKTD-TDEQVGKKLDPAE-----VIETTKTAETADDQSTSIA 456
Query: 371 GKSV 374
+++
Sbjct: 457 NRTI 460
>gi|46110132|ref|XP_382124.1| hypothetical protein FG01948.1 [Gibberella zeae PH-1]
Length = 1142
Score = 329 bits (843), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 166/383 (43%), Positives = 243/383 (63%), Gaps = 13/383 (3%)
Query: 403 EKDKEKAKDPDKEKGKEKD------TERKVETEKEKLKGVE----GTNLDALLQRLPGCV 452
E K+K D D++ GK+ D T + ET ++ + G +DALL RLP
Sbjct: 440 EDGKKKKTDTDEQVGKKLDPAEVPETTKIAETADDQSTSIANRTIGAQVDALLARLPELT 499
Query: 453 SRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSML 512
++D++DQ ++FC+LNSK++R RLV+AL VP+ +LLP +SR+VATL M DV L
Sbjct: 500 NKDIVDQTAIDFCFLNSKASRNRLVKALTEVPKGRSDLLPSWSRLVATLGRYMPDVPKGL 559
Query: 513 IQMLEEEFNFLINKKDQMNI-ETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHN 571
+ L+ EF L +K++ + + ++ NIR++ EL KF I P +VF CLK LDDF+ N
Sbjct: 560 VDYLDAEFRSLQRRKEKDFLGQVRLSNIRYLAELTKFGIVPEHVVFHCLKVSLDDFSRMN 619
Query: 572 IDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPE 631
I++ CNL+E CGR+L R+PET+ RM + LE L R K+V+++ L++NA Y PPE
Sbjct: 620 IEILCNLIENCGRYLLRNPETAPRMMSFLETLQRKKSVQHIGQPERMLIDNAVYYVDPPE 679
Query: 632 RSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKG 689
RSA K R P+ ++RKL++ D+ K + +L+Q+R+L W + E + L K F K K
Sbjct: 680 RSAIEQKERTPMELFVRKLIYVDMTKRNYSKILKQIRRLHWEEAEVVAILEKVFSKPGKV 739
Query: 690 KYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELY 749
KYG +HL+ L + L RYH F V V+D V+E + GLE NDY QRR+A +++LGELY
Sbjct: 740 KYGSVHLLGILLSALYRYHPAFVVKVIDNVIESMTFGLEQNDYRFYQRRIAEVKYLGELY 799
Query: 750 NYEHVDSSVIFDTLYLILVFGHG 772
NY ++ VIFDT+Y I+ FG+G
Sbjct: 800 NYRMLEHPVIFDTMYKIMTFGYG 822
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 162/375 (43%), Gaps = 73/375 (19%)
Query: 61 LKICSLLHQRY--KDFSPCLI-----------DGLLKVFFPGKSGEDLDADRNLKAMKKR 107
++I S LHQR+ +F+ L G+LK P + + + +++R
Sbjct: 117 VEIVSALHQRFGPSEFTEYLAWLLGKGMATPDKGILKSLAPEVR----EKEEKERIIRQR 172
Query: 108 STLKLLLELYFIGII-------------EDSSIFINIIKDLTS---------IEHLKD-- 143
+ L+++ EL+ +G+I + ++ +K TS +E LKD
Sbjct: 173 ALLRVVTELWLVGVIRTLDDVSKPDDATKGAAGKTTELKTRTSKASGAEPFPLEVLKDLL 232
Query: 144 -RDTTQTNLTLLASFARQ-GRIFLGL-PLSGPGQEIYEEFFK-----------GLNITA- 188
D NL LL F + LG+ P G++ EE G N T+
Sbjct: 233 GHDREHANLPLLVIFVKSFSWDILGVKPTGADGRKTVEEDGSTEGHEAEQGDDGENGTSS 292
Query: 189 --DQ-------KKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSS 239
DQ + F+ Y++ V+ + + S++ NA+ GE+ E+ +
Sbjct: 293 DEDQPFAEPEMRDRFRNILKKYFDDVKGHIIRDQKSIQSQARRNAEAYVKSGEVFEDRQA 352
Query: 240 SYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASG---KDSSVPE 296
+YEK K+ + L N +A+A+ ++ P + + + ++G +G +
Sbjct: 353 NYEKQVKAQERLVSNAQVVADAIGVEMPDLKDSDDSLAASNGSIGLVKTGDYLRSMGDGA 412
Query: 297 PVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAA- 355
+W+D++ R FYE L DL+ VPA+LL + + K + + + + + DPA P+ ++A
Sbjct: 413 GIWEDDDERRFYENLVDLKGKVPAILLEDGKKKKTD-TDEQVGKKLDPAEVPETTKIAET 471
Query: 356 ---QDTAEVSADLGA 367
Q T+ + +GA
Sbjct: 472 ADDQSTSIANRTIGA 486
>gi|317029329|ref|XP_001391359.2| hypothetical protein ANI_1_332064 [Aspergillus niger CBS 513.88]
Length = 1650
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 168/394 (42%), Positives = 250/394 (63%), Gaps = 6/394 (1%)
Query: 381 EEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEKDTERKVETEKEKLKGVEGTN 440
E+ +K+KA+D E GK K+++ D EK + + +EK + G
Sbjct: 930 EDGKKKKAED---ETGKKKEEDGTDTEKTEAGQVQSAEEKAAAEADDQSTAIASKTVGAQ 986
Query: 441 LDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVAT 500
+DALL +LP ++D +DQL ++FC+LNSK++R RL++A+ +VP+ ++LLP YSR+VAT
Sbjct: 987 VDALLAKLPDLQTKDHVDQLALDFCFLNSKASRNRLIKAVSDVPKGRIDLLPLYSRLVAT 1046
Query: 501 LSTCMKDVSSMLIQMLEEEFNFLINKKDQMNI-ETKIRNIRFIGELCKFKIAPAGLVFSC 559
L M D+ L L+EEF L +K + + + ++ N+R++ EL KF + P ++F C
Sbjct: 1047 LGQYMPDIPQGLTTYLDEEFRSLQRRKSKEFLGQVRMSNVRYLAELTKFGVVPEHIIFHC 1106
Query: 560 LKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTL 619
K LDDF+ NI++ +LLE CGR+L R+P+TS RMA+ LE L R K V++L + +
Sbjct: 1107 FKVSLDDFSRMNIEIIGHLLENCGRYLLRNPDTSPRMASFLETLGRKKTVQHLGQQERMI 1166
Query: 620 VENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPW--SDCES 677
+ENA Y PP R A K R P+ YIR+L++ D++K + +L+ +RKL W D
Sbjct: 1167 IENAVYYVDPPPRPAIQQKERTPMESYIRRLVYLDMNKRNYTKILKSIRKLHWEEQDVVD 1226
Query: 678 YLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQR 737
L + F K K KYG IHL+A L + L RYH +F + VVD +LE+I LGLE ND+ Q+
Sbjct: 1227 ILERVFSKPVKVKYGNIHLLAILVSALYRYHQDFVIGVVDNILEQITLGLEQNDFKFNQK 1286
Query: 738 RLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
R+A +++LGELYNY+ +DS VIFDTLY I+ FGH
Sbjct: 1287 RIAEVKYLGELYNYKMIDSPVIFDTLYRIITFGH 1320
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 65/146 (44%), Gaps = 11/146 (7%)
Query: 194 FKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYR 253
FK + Y V+ + + +L NA+ GE+ E+ +++EK KS + L
Sbjct: 797 FKHILNRYLEDVKAHVVRDQRALAAQSRRNAEAYVKSGEIFEDRQANFEKQTKSLERLVT 856
Query: 254 NVSSLAEALDMQPPVMPED-------VHTTRVTSGEDASPASGKDSSVPEPVWDDEETRA 306
N L E L ++ P + E + + G+ + + W+DEE R
Sbjct: 857 NTQVLCEVLGVEMPALAEKESADAGAGGGIGLVKASEYLRGQGEGAGI----WEDEEERR 912
Query: 307 FYECLPDLRAFVPAVLLGEAEHKANE 332
FYE L DL+ VPAVLL + + K E
Sbjct: 913 FYENLVDLKGKVPAVLLEDGKKKKAE 938
>gi|156063538|ref|XP_001597691.1| hypothetical protein SS1G_01887 [Sclerotinia sclerotiorum 1980]
gi|154697221|gb|EDN96959.1| hypothetical protein SS1G_01887 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1245
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 164/385 (42%), Positives = 241/385 (62%), Gaps = 15/385 (3%)
Query: 403 EKDKEKAKDPDKEKGKEKDTERKVETEKEKLKGVE------------GTNLDALLQRLPG 450
E K+K D D++ GK+ DT E + + G +DALL RLP
Sbjct: 425 EDGKKKKPDTDEQVGKKIDTSEIASAESTATRPTDDDQSTAIANKTIGAQVDALLARLPD 484
Query: 451 CVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSS 510
+++D+ID+ ++FC+LNSK++R RL++A+ VP+ +LLP YSR+VATL M D++
Sbjct: 485 LINKDMIDEAAIDFCFLNSKASRNRLIKAVQEVPKGRSDLLPSYSRLVATLGKYMPDITK 544
Query: 511 MLIQMLEEEFNFLINKKDQMNI-ETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTH 569
L+ L++EF L +K++ + + ++ NIR++ EL KF + P ++F CLK LDDF+
Sbjct: 545 GLVDYLDQEFRSLQRRKEKEFLGQARLGNIRYLAELTKFGVVPEHVIFHCLKVSLDDFSR 604
Query: 570 HNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKP 629
NI++ CNLLE CGR+L R+PE S RM + LE L R K+V+++ + L+ENA Y P
Sbjct: 605 MNIEIICNLLENCGRYLLRNPEMSPRMTSFLETLKRKKSVQHIGQQERMLIENAVYYVDP 664
Query: 630 PERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVH 687
P R+A K R P +IRKL++SD+ + +++ +R+L W + E + L K K
Sbjct: 665 PLRAAIQQKERTPTDLFIRKLVYSDMTTRNYARIIKSIRRLHWEESEVVTILEKVLSKPG 724
Query: 688 KGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGE 747
K KYG I+L+A +T L RYH F V V+D VLE I +GLE ND+ QRR+A +++LGE
Sbjct: 725 KVKYGNIYLLAIVTGALFRYHQSFVVTVIDNVLEYIIVGLEQNDFKFNQRRIAEVKYLGE 784
Query: 748 LYNYEHVDSSVIFDTLYLILVFGHG 772
LYN+ VD VIFDT+Y IL FGHG
Sbjct: 785 LYNFRMVDHPVIFDTMYRILTFGHG 809
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 69/139 (49%), Gaps = 3/139 (2%)
Query: 194 FKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYR 253
F+ + Y+ V+ L + ++ + ++++ G++ E+ ++YEK K+ + L
Sbjct: 292 FRNILNRYFEDVKAHLIRDQKAIGKQARKDSEAYVKSGQVFEDRQANYEKAVKAQERLIS 351
Query: 254 NVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASG---KDSSVPEPVWDDEETRAFYEC 310
N LAE++ + P + + + + +G +G + +W+DE+ R FYE
Sbjct: 352 NAQVLAESIGAEMPDLKDADDPSALGNGGVGLVKTGDYLRGEGEGAGIWEDEDERRFYEN 411
Query: 311 LPDLRAFVPAVLLGEAEHK 329
L DL+ VP +LL + + K
Sbjct: 412 LVDLKGKVPGMLLEDGKKK 430
>gi|350635483|gb|EHA23844.1| hypothetical protein ASPNIDRAFT_180771 [Aspergillus niger ATCC
1015]
Length = 1134
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 168/394 (42%), Positives = 250/394 (63%), Gaps = 6/394 (1%)
Query: 381 EEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEKDTERKVETEKEKLKGVEGTN 440
E+ +K+KA+D E GK K+++ D EK + + +EK + G
Sbjct: 414 EDGKKKKAED---ETGKKKEEDGTDTEKTEAGQVQSAEEKAAAEADDQSTAIASKTVGAQ 470
Query: 441 LDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVAT 500
+DALL +LP ++D +DQL ++FC+LNSK++R RL++A+ +VP+ ++LLP YSR+VAT
Sbjct: 471 VDALLAKLPDLQTKDHVDQLALDFCFLNSKASRNRLIKAVSDVPKGRIDLLPLYSRLVAT 530
Query: 501 LSTCMKDVSSMLIQMLEEEFNFLINKKDQMNI-ETKIRNIRFIGELCKFKIAPAGLVFSC 559
L M D+ L L+EEF L +K + + + ++ N+R++ EL KF + P ++F C
Sbjct: 531 LGQYMPDIPQGLTTYLDEEFRSLQRRKSKEFLGQVRMSNVRYLAELTKFGVVPEHIIFHC 590
Query: 560 LKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTL 619
K LDDF+ NI++ +LLE CGR+L R+P+TS RMA+ LE L R K V++L + +
Sbjct: 591 FKVSLDDFSRMNIEIIGHLLENCGRYLLRNPDTSPRMASFLETLGRKKTVQHLGQQERMI 650
Query: 620 VENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPW--SDCES 677
+ENA Y PP R A K R P+ YIR+L++ D++K + +L+ +RKL W D
Sbjct: 651 IENAVYYVDPPPRPAIQQKERTPMESYIRRLVYLDMNKRNYTKILKSIRKLHWEEQDVVD 710
Query: 678 YLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQR 737
L + F K K KYG IHL+A L + L RYH +F + VVD +LE+I LGLE ND+ Q+
Sbjct: 711 ILERVFSKPVKVKYGNIHLLAILVSALYRYHQDFVIGVVDNILEQITLGLEQNDFKFNQK 770
Query: 738 RLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
R+A +++LGELYNY+ +DS VIFDTLY I+ FGH
Sbjct: 771 RIAEVKYLGELYNYKMIDSPVIFDTLYRIITFGH 804
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 83/193 (43%), Gaps = 23/193 (11%)
Query: 194 FKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYR 253
FK + Y V+ + + +L NA+ GE+ E+ +++EK KS + L
Sbjct: 281 FKHILNRYLEDVKAHVVRDQRALAAQSRRNAEAYVKSGEIFEDRQANFEKQTKSLERLVT 340
Query: 254 NVSSLAEALDMQPPVMPED-------VHTTRVTSGEDASPASGKDSSVPEPVWDDEETRA 306
N L E L ++ P + E + + G+ + + W+DEE R
Sbjct: 341 NTQVLCEVLGVEMPALAEKESAEAGAGGGIGLVKASEYLRGQGEGAGI----WEDEEERR 396
Query: 307 FYECLPDLRAFVPAVLLGEA-EHKANEPSVKPLEQPTDPASEPDQGQLAA---------- 355
FYE L DL+ VPAVLL + + KA + + K E+ + + GQ+ +
Sbjct: 397 FYENLVDLKGKVPAVLLEDGKKKKAEDETGKKKEEDGTDTEKTEAGQVQSAEEKAAAEAD 456
Query: 356 -QDTAEVSADLGA 367
Q TA S +GA
Sbjct: 457 DQSTAIASKTVGA 469
>gi|134075830|emb|CAK39364.1| unnamed protein product [Aspergillus niger]
Length = 1126
Score = 328 bits (841), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 168/394 (42%), Positives = 250/394 (63%), Gaps = 6/394 (1%)
Query: 381 EEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEKDTERKVETEKEKLKGVEGTN 440
E+ +K+KA+D E GK K+++ D EK + + +EK + G
Sbjct: 429 EDGKKKKAED---ETGKKKEEDGTDTEKTEAGQVQSAEEKAAAEADDQSTAIASKTVGAQ 485
Query: 441 LDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVAT 500
+DALL +LP ++D +DQL ++FC+LNSK++R RL++A+ +VP+ ++LLP YSR+VAT
Sbjct: 486 VDALLAKLPDLQTKDHVDQLALDFCFLNSKASRNRLIKAVSDVPKGRIDLLPLYSRLVAT 545
Query: 501 LSTCMKDVSSMLIQMLEEEFNFLINKKDQMNI-ETKIRNIRFIGELCKFKIAPAGLVFSC 559
L M D+ L L+EEF L +K + + + ++ N+R++ EL KF + P ++F C
Sbjct: 546 LGQYMPDIPQGLTTYLDEEFRSLQRRKSKEFLGQVRMSNVRYLAELTKFGVVPEHIIFHC 605
Query: 560 LKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTL 619
K LDDF+ NI++ +LLE CGR+L R+P+TS RMA+ LE L R K V++L + +
Sbjct: 606 FKVSLDDFSRMNIEIIGHLLENCGRYLLRNPDTSPRMASFLETLGRKKTVQHLGQQERMI 665
Query: 620 VENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPW--SDCES 677
+ENA Y PP R A K R P+ YIR+L++ D++K + +L+ +RKL W D
Sbjct: 666 IENAVYYVDPPPRPAIQQKERTPMESYIRRLVYLDMNKRNYTKILKSIRKLHWEEQDVVD 725
Query: 678 YLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQR 737
L + F K K KYG IHL+A L + L RYH +F + VVD +LE+I LGLE ND+ Q+
Sbjct: 726 ILERVFSKPVKVKYGNIHLLAILVSALYRYHQDFVIGVVDNILEQITLGLEQNDFKFNQK 785
Query: 738 RLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
R+A +++LGELYNY+ +DS VIFDTLY I+ FGH
Sbjct: 786 RIAEVKYLGELYNYKMIDSPVIFDTLYRIITFGH 819
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 83/193 (43%), Gaps = 23/193 (11%)
Query: 194 FKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYR 253
FK + Y V+ + + +L NA+ GE+ E+ +++EK KS + L
Sbjct: 296 FKHILNRYLEDVKAHVVRDQRALAAQSRRNAEAYVKSGEIFEDRQANFEKQTKSLERLVT 355
Query: 254 NVSSLAEALDMQPPVMPED-------VHTTRVTSGEDASPASGKDSSVPEPVWDDEETRA 306
N L E L ++ P + E + + G+ + + W+DEE R
Sbjct: 356 NTQVLCEVLGVEMPALAEKESADAGAGGGIGLVKASEYLRGQGEGAGI----WEDEEERR 411
Query: 307 FYECLPDLRAFVPAVLLGEA-EHKANEPSVKPLEQPTDPASEPDQGQLAA---------- 355
FYE L DL+ VPAVLL + + KA + + K E+ + + GQ+ +
Sbjct: 412 FYENLVDLKGKVPAVLLEDGKKKKAEDETGKKKEEDGTDTEKTEAGQVQSAEEKAAAEAD 471
Query: 356 -QDTAEVSADLGA 367
Q TA S +GA
Sbjct: 472 DQSTAIASKTVGA 484
>gi|388854977|emb|CCF51480.1| related to NMD2-Nonsense-mediated mRNA decay protein 2 [Ustilago
hordei]
Length = 1253
Score = 328 bits (840), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 214/754 (28%), Positives = 351/754 (46%), Gaps = 96/754 (12%)
Query: 62 KICSLLHQRY--KDFSPCLIDGLLKVFFPGK-------SGEDLDADRNLKAMKKRSTLKL 112
+I S H R+ + FS L L + P + E + D + +++ L++
Sbjct: 126 EIVSAFHVRFGGEAFSLPLTIALEQALAPASKTVYQNATAEQKERDEAARVARQKPLLRV 185
Query: 113 LLELYFIGIIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGLPLSG 171
EL + I S+ T +++L D +N+ LL S + G+ L P +
Sbjct: 186 TAELALVEAIGTSNDNKGAAWLYTLLKNLLATDKEHSNVPLLISILKGLGQSILAPPAAS 245
Query: 172 PGQEIYEEFFKGLN--------------------ITADQKKIFKKAFHTYYNAVQELLQA 211
+ L +++D + F+K +Y+ + +
Sbjct: 246 DADTQLSKQANSLTLGEVVDMSAVEAADPATAPLVSSDMQAKFRKLIESYFQTLARRIVK 305
Query: 212 EHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPE 271
EH L+ + +N + GE+ E+ +YE++ KS++ + L++ L + P +
Sbjct: 306 EHQRLQDQDRKNHEAYIRSGEIFEDRQQNYERMTKSFERVRDWGRILSDLLHVPMPELES 365
Query: 272 DVHTTRVTS------GEDASPASGKDSSVPEPVWDDEETRAFYECLPDLRAFVPAVLLGE 325
+ + A + ++ + + W+D++++ FYE + DL +P +L
Sbjct: 366 SASASNAVGLGVNLDSKSAFERADEEFATDQSPWEDQDSQKFYEEILDLGDIIPPAIL-- 423
Query: 326 AEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTAEVSADLGASPEGKSVEKGKDKEEKEK 385
AQ T G S S+
Sbjct: 424 -----------------------------AQTT-------GISTNASSI----------- 436
Query: 386 EKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEKDTERKVETEKEKLKGVEGTNLDALL 445
G+ E+ DP + + E + L L+
Sbjct: 437 ---------GGRADWAEDGASRSETDPVSTSSGLNTPQLNADQTDEVMNAGPAAQLATLM 487
Query: 446 QRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCM 505
+L +R +ID V+F ++ +K R++L++ L ++PR ++L PYY+R+ ATL+ M
Sbjct: 488 AKLLDMTNRSMIDSAAVDFAFIATKPARRKLIKHLASLPRNRIDLAPYYARLAATLNRYM 547
Query: 506 KDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLD 565
DV S L +LE+EF +L KK+ ET+ +N RFI EL KFK+ P +F CLK CL+
Sbjct: 548 PDVGSGLTSLLEDEFRYLQRKKNVDLTETRAKNARFISELTKFKVTPTHAIFHCLKTCLE 607
Query: 566 DFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYY 625
DFT NIDV +LLE CGR+L R+ TS M +MLE+L R + NLD R + L+ NAYY
Sbjct: 608 DFTGPNIDVLASLLEGCGRYLLRTEATSANMRSMLEMLRRKRAAANLDSRQLLLLNNAYY 667
Query: 626 LCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCESY--LLKCF 683
C PP+R A KVR P+ YIR L++ L K ++HV+ QLRKL W + E Y L F
Sbjct: 668 QCNPPKRKAAEQKVRSPMELYIRHLIYHVLTKKMVDHVVMQLRKLNWDNPEVYGWLKDAF 727
Query: 684 MKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMR 743
+ + +Y IHL+A L L R+H FAV V+D++LE +R+G+E N + QRR+A +
Sbjct: 728 TRAWRIRYSNIHLLAILLYELDRFHPSFAVEVIDQILENVRIGMEENIFKHNQRRVATIC 787
Query: 744 FLGELYNYEHVDSSVIFDTLYLILVFGHGTAETY 777
+LGELYNY ++S ++F+ L+ ++ FGH +
Sbjct: 788 YLGELYNYRLINSGMLFEQLWSLVTFGHPNGRPW 821
>gi|322792405|gb|EFZ16389.1| hypothetical protein SINV_11858 [Solenopsis invicta]
Length = 1131
Score = 328 bits (840), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 163/334 (48%), Positives = 225/334 (67%), Gaps = 4/334 (1%)
Query: 441 LDALLQRLPGCVSRDLIDQLTVEFCY-LNSKSNRKRLVRALFNVPRTSLELLPYYSRMVA 499
LDA L LP CV+R++ID V F LN+K N+K+LV+ALF V R +LLP+YSR+ A
Sbjct: 434 LDAFLTHLPNCVNREMIDNAAVNFLMNLNTKHNKKKLVKALFGVSRIRQDLLPFYSRLAA 493
Query: 500 TLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSC 559
L M ++ + L QML+++F + + KKDQ+NIE+KI+ +R+IGEL KFK+ C
Sbjct: 494 ILYPVMPEIGNDLCQMLKQDFKYHVRKKDQINIESKIKVVRYIGELVKFKLYSKIEALYC 553
Query: 560 LKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTL 619
LK L DFTHH+I++ACNLLE CGR+L+ SP++ R LE +MR K V LD R+VT+
Sbjct: 554 LKVLLHDFTHHHIEMACNLLEICGRYLFCSPDSHQRTKVYLEQMMRKKAVTALDSRYVTI 613
Query: 620 VENAYYLCKPPERSARVSKV-RPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSD--CE 676
+ENAYY PPE + V+K RPP+H++IRKLL+ DL K++ + VL+ +RKL W D
Sbjct: 614 IENAYYFVNPPESTGGVTKKDRPPVHEFIRKLLYQDLSKTNTDKVLKWMRKLDWEDESVS 673
Query: 677 SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQ 736
SY +KC + KY I + SL AGL +++ VVD VLE+IRL +E+N Q
Sbjct: 674 SYAIKCLTAAYNVKYPNIRCVGSLLAGLVAHYETIGPQVVDGVLEDIRLCMEINLPKFNQ 733
Query: 737 RRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
RR+A +++LGELYNY V+S IF TLYL++ FG
Sbjct: 734 RRIAMVKYLGELYNYRMVESGDIFRTLYLLITFG 767
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 127/271 (46%), Gaps = 14/271 (5%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
+++CS LHQ Y +FS + ++ K G D+ K R L+ EL G
Sbjct: 120 IRVCSFLHQTYAEFSTHFFENWQRIL-SFKIG-----DKIANPSKLRVDLRFYAELVNAG 173
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGLPLSGPGQEIYEE 179
I + LT + ++ + N +++ SF R G + GL + +E+ E+
Sbjct: 174 IFTHKQGLPLLGSVLTVLINMDKEE--HNNASIILSFCRHCGEDYAGL-VPKKVRELSEK 230
Query: 180 FF----KGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSE 235
K +T D+++ K YYN++ + + EH L+ E +N KIL +GELS
Sbjct: 231 LNVTIPKSKLLTPDKQQNVKLLLRDYYNSLCKHMLKEHKELQAFEKQNRKILQTRGELSS 290
Query: 236 ENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASGKDSSVP 295
E E L+ SY+ L +V S ++ LD P +P D T G+D+++
Sbjct: 291 ERKEKLEALQVSYERLLTSVQSFSDTLDEPMPELPVDNEIKTETEETLKMINEGEDNAML 350
Query: 296 EPVWDDEETRAFYECLPDLRAFVPAVLLGEA 326
E +W DEETR FYE LPDL F+P L E
Sbjct: 351 EDMWGDEETRRFYEVLPDLTVFLPGSYLKET 381
>gi|332018267|gb|EGI58872.1| Regulator of nonsense transcripts 2 [Acromyrmex echinatior]
Length = 1157
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 163/334 (48%), Positives = 225/334 (67%), Gaps = 4/334 (1%)
Query: 441 LDALLQRLPGCVSRDLIDQLTVEFCY-LNSKSNRKRLVRALFNVPRTSLELLPYYSRMVA 499
LDA L LP CV+R++ID V F LN+K N+K+LV+ALF V R +LLP+YSR+ A
Sbjct: 439 LDAFLTHLPNCVNREMIDNAAVNFLMNLNTKHNKKKLVKALFGVSRIRQDLLPFYSRLAA 498
Query: 500 TLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSC 559
L M ++ + L QML+++F + + KKDQ+NIE+KI+ +R+IGEL KFK+ C
Sbjct: 499 ILYPVMPEIGNDLCQMLKQDFKYHVRKKDQINIESKIKVVRYIGELVKFKLYSKIEALYC 558
Query: 560 LKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTL 619
LK L DFTHH+I++ACNLLE CGR+L+ SP++ R LE +MR K V LD R+VT+
Sbjct: 559 LKVLLHDFTHHHIEMACNLLEICGRYLFCSPDSHQRTKVYLEQMMRKKAVTALDSRYVTI 618
Query: 620 VENAYYLCKPPERSARVSKV-RPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSD--CE 676
+ENAYY PPE + V+K RPP+H++IRKLL+ DL K++ + VL+ +RKL W D
Sbjct: 619 IENAYYFVNPPESTGGVTKKDRPPVHEFIRKLLYQDLSKTNTDKVLKWMRKLDWEDESVS 678
Query: 677 SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQ 736
SY +KC + KY I + SL AGL +++ VVD VLE+IRL +E+N Q
Sbjct: 679 SYAIKCLTAAYNVKYPNIRCVGSLLAGLVAHYETIGPQVVDGVLEDIRLCMEINLPKFNQ 738
Query: 737 RRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
RR+A +++LGELYNY V+S IF TLYL++ FG
Sbjct: 739 RRIAMVKYLGELYNYRMVESGDIFRTLYLLITFG 772
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 124/271 (45%), Gaps = 14/271 (5%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
+++CS LHQ Y +FS + ++ K G D+ K R L+ EL G
Sbjct: 125 IRVCSFLHQTYAEFSTHFFENWQRIL-SLKVG-----DKITNPSKLRVDLRFYAELVNAG 178
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGLPLSGPGQEIYEE 179
I + LT + ++ + N +++ SF R G + GL + +E+ E+
Sbjct: 179 IFTHKQGLPLLGSVLTVLINMDKEE--HNNASIILSFCRHCGEDYAGL-VPKKVRELSEK 235
Query: 180 FF----KGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSE 235
K ++ D+++ K YYN++ + + EH L+ E +N KIL +GELS
Sbjct: 236 LNISIPKSKMLSPDKQQNVKLLLREYYNSLCKHMLKEHKELQAFEKQNRKILQTRGELSS 295
Query: 236 ENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASGKDSSVP 295
E E L+ Y+ L NV S ++ LD P +P D G+D+++
Sbjct: 296 ERKEKLEALQVCYERLLTNVQSFSDTLDEPMPELPVDNEIKAEVEETLKMINEGEDNAML 355
Query: 296 EPVWDDEETRAFYECLPDLRAFVPAVLLGEA 326
E +W DEETR FYE PDL F+P L +
Sbjct: 356 EDMWGDEETRRFYEVFPDLTVFLPGSYLKDT 386
>gi|115399962|ref|XP_001215570.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114191236|gb|EAU32936.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 1169
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 166/389 (42%), Positives = 246/389 (63%), Gaps = 9/389 (2%)
Query: 392 DKEKGKGKDKE---EKDKEKAKDPDKEKGKEKDTERKVETEKEKLKGVE---GTNLDALL 445
D +K KG+ E +KD E A +P EK + D + + + + G +DALL
Sbjct: 451 DGKKKKGEADEGAKKKDGETAAEPAAEKTEPSDEKAAADADDQSTAIASRTVGAQVDALL 510
Query: 446 QRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCM 505
+LP ++D +DQL ++FC++NSK++R RL++A+ +VP+ ++LLP YSR+VATL +
Sbjct: 511 AKLPDLQTKDQVDQLALDFCFVNSKASRNRLIKAVSDVPKGRIDLLPLYSRLVATLGQYL 570
Query: 506 KDVSSMLIQMLEEEFNFLINKKDQMNI-ETKIRNIRFIGELCKFKIAPAGLVFSCLKACL 564
D+ L L+EEF L +K + + + ++ N+R++ EL KF + P ++F C K L
Sbjct: 571 PDIPQGLTTYLDEEFRSLQRRKSKEFLGQVRMSNVRYLAELTKFGVVPEHIIFHCFKVSL 630
Query: 565 DDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAY 624
DDF+ NI++ +LLE CGR+L R+PETS RMA+ LE L R K V++L + ++ENA
Sbjct: 631 DDFSRVNIEIIGHLLENCGRYLLRNPETSPRMASFLETLGRKKTVQHLSQQERMIIENAV 690
Query: 625 YLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPW--SDCESYLLKC 682
Y PP R A K R P+ +IRKL++ D++K + +L+ +RKL W D L +
Sbjct: 691 YYVDPPPRPAIQQKERTPMESFIRKLIYLDMNKRNYTKILKSIRKLHWEEQDVVCILERV 750
Query: 683 FMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHM 742
F K K KYG IHL+A L + L RYH F + VVD VLE+I LGLE ND+ Q+R+A +
Sbjct: 751 FSKPVKVKYGNIHLLAILVSALYRYHQNFVIGVVDNVLEQITLGLEQNDFKFNQKRIAEV 810
Query: 743 RFLGELYNYEHVDSSVIFDTLYLILVFGH 771
++LGELYNY+ +DS V+FDTLY I+ FGH
Sbjct: 811 KYLGELYNYKMIDSPVVFDTLYRIVTFGH 839
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 85/190 (44%), Gaps = 18/190 (9%)
Query: 194 FKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYR 253
FK + Y V+ + + +L NA+ GE+ E+ +++EK KS + L
Sbjct: 317 FKSILNRYLEDVKAHVVRDQRALAAQSRRNAEAYVKSGEIFEDRQANFEKQTKSLEKLIA 376
Query: 254 NVSSLAEALDMQPPVMPEDVHTTRVTSG-----EDASPASGKDSSVPEPVWDDEETRAFY 308
N L EAL + P + E +SG + + G+ +W+DEE R FY
Sbjct: 377 NTQVLCEALGAEMPALAEQESADATSSGGIGLVKTSEYLRGQGEGAG--IWEDEEERRFY 434
Query: 309 ECLPDLRAFVPAVLL-------GEAEHKA----NEPSVKPLEQPTDPASEPDQGQLAAQD 357
E L DL+ VPAVLL GEA+ A E + +P + T+P+ E Q
Sbjct: 435 ENLVDLKGKVPAVLLEDGKKKKGEADEGAKKKDGETAAEPAAEKTEPSDEKAAADADDQS 494
Query: 358 TAEVSADLGA 367
TA S +GA
Sbjct: 495 TAIASRTVGA 504
>gi|345487678|ref|XP_003425737.1| PREDICTED: regulator of nonsense transcripts 2-like [Nasonia
vitripennis]
Length = 1169
Score = 327 bits (838), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 164/337 (48%), Positives = 228/337 (67%), Gaps = 4/337 (1%)
Query: 441 LDALLQRLPGCVSRDLIDQLTVEFCY-LNSKSNRKRLVRALFNVPRTSLELLPYYSRMVA 499
LDA L LP CV+R++ID V+F LN+K N+++L++ALF V R L+LLP+YSR+ A
Sbjct: 434 LDAFLSHLPNCVNREMIDNAAVDFLMNLNTKHNKRKLIKALFGVSRIRLDLLPFYSRLAA 493
Query: 500 TLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSC 559
L M +V + L ML+ +F + ++KKDQ+NIE+KI+ +R+IGEL KFK+ C
Sbjct: 494 ILQPVMPEVGNELCLMLKHDFKYHVHKKDQINIESKIKVVRYIGELVKFKLYSKIEALYC 553
Query: 560 LKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTL 619
LK L DFTHH+I++ACNLLETCGRFL+ S ++ R LE +MR K V LD R+VT+
Sbjct: 554 LKVLLHDFTHHHIEMACNLLETCGRFLFCSADSHQRTKVYLEQMMRKKAVTALDSRYVTI 613
Query: 620 VENAYYLCKPPERSARVS-KVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSD--CE 676
+ENAYY PPE + V+ K RPP+H++IRKLL+ +L K++ + VL+ +RKL W D
Sbjct: 614 IENAYYFVNPPESTGNVARKDRPPVHEFIRKLLYQELSKTNTDKVLKWMRKLDWEDEALA 673
Query: 677 SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQ 736
SY +KC H KY I + SL AGL +++ VVD VLE+IRL +E+N Q
Sbjct: 674 SYAIKCLTAAHNVKYLNIRCVGSLLAGLVAHYEAVGPLVVDGVLEDIRLCMEINLPKYNQ 733
Query: 737 RRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHGT 773
RR+A +++LGELYNY V+S+ IF TLYL++ FG T
Sbjct: 734 RRIAMVKYLGELYNYRMVESADIFRTLYLLITFGVST 770
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 125/265 (47%), Gaps = 14/265 (5%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
+K CS+LHQ Y +FS + K+ K G D+ K R L+ EL G
Sbjct: 121 IKACSVLHQTYAEFSTHFFENWQKIL-SFKVG-----DKITNPSKLRIDLRFYAELINAG 174
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGLPLSGPGQEIYEE 179
I + LT + ++ + N +++ SF R G + GL + +E+ E+
Sbjct: 175 IFTHKQGLPLLGSVLTVLINMDKEE--HNNASIILSFCRHCGEDYAGL-VPKRIRELSEK 231
Query: 180 FFKGLN----ITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSE 235
L +T D+++ K YYN++ + L EH L+ E +N KIL +GELS
Sbjct: 232 LNIALPKSKLLTPDKQQNVKSLLRDYYNSLCKHLFKEHKELQAFEKQNRKILQTRGELSS 291
Query: 236 ENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASGKDSSVP 295
E E L+ SY+ L +V S ++ LD P +P D T + G+++S+
Sbjct: 292 ERKEKLEALQLSYERLLSSVQSFSDTLDEPMPELPVDNEVKTETEESLKMISEGEENSIM 351
Query: 296 EPVWDDEETRAFYECLPDLRAFVPA 320
E +W DEETR FYE L DL F+P
Sbjct: 352 EDMWGDEETRRFYEVLTDLSVFLPG 376
>gi|346970243|gb|EGY13695.1| nonsense-mediated mRNA decay protein [Verticillium dahliae VdLs.17]
Length = 1070
Score = 327 bits (838), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 170/392 (43%), Positives = 237/392 (60%), Gaps = 13/392 (3%)
Query: 384 EKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEKDTERKVETEKEKLKGVEGTNLDA 443
E K K P+ ++ GK + D E K D + K G +DA
Sbjct: 410 EDGKKKKPENDEQVGKKIDAADVEAPKPTDAADDQSMAIANKTI----------GAQVDA 459
Query: 444 LLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLST 503
+L RLP ++D ID+ ++FC+LNSK++R RL++AL VP+ +LLP ++R+ ATL
Sbjct: 460 VLARLPELTTKDAIDETAIDFCFLNSKASRNRLIKALTEVPKGRGDLLPCWARLAATLGQ 519
Query: 504 CMKDVSSMLIQMLEEEFNFLINKKDQMNI-ETKIRNIRFIGELCKFKIAPAGLVFSCLKA 562
M DV L+ L+ EF L +K++ + + ++ NIR++ EL KF I P +VF CLK
Sbjct: 520 YMPDVPKGLVDYLDAEFRSLQRRKEKDFLGQVRLGNIRYLAELTKFGIVPEHVVFHCLKV 579
Query: 563 CLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVEN 622
+DDF+ NI++ CNLLE CGR+L R+PETS RMA LE L R K+V+++ L+EN
Sbjct: 580 SMDDFSKMNIEIICNLLENCGRYLLRNPETSPRMATFLETLQRKKSVQHIGQAERMLIEN 639
Query: 623 AYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE--SYLL 680
A Y PPER A K R P+ +IRKL++ D+ K + +L+Q+R+L W + E + L
Sbjct: 640 AVYYVDPPERPAIEQKERDPMELFIRKLIYMDMTKRNFSKILKQIRRLHWEETEVVTILE 699
Query: 681 KCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLA 740
K F K K KYG IHL+A L L RYH FAV V+D ++E I GLELNDY QRR+A
Sbjct: 700 KVFSKPGKVKYGNIHLLAILMGALYRYHPAFAVKVIDNLIESICFGLELNDYKYYQRRIA 759
Query: 741 HMRFLGELYNYEHVDSSVIFDTLYLILVFGHG 772
++LGELYNY V+ VIFD +Y I+ FGHG
Sbjct: 760 EAKYLGELYNYRMVEHPVIFDAMYKIVTFGHG 791
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 88/200 (44%), Gaps = 34/200 (17%)
Query: 194 FKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYR 253
FK Y++ V+ + + ++ NA+ GE+ E+ S+YEK KS + L
Sbjct: 278 FKSILKRYFDDVKNHVLRDQKAIHSQARRNAEAYVKSGEVFEDRQSNYEKQVKSQERLVA 337
Query: 254 NVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASGKDSSVP-----------EPVWDDE 302
N ++A+ + + P + + EDA A+G V +W+DE
Sbjct: 338 NAQAIADVIGAEMPDLKDH---------EDAGAANGSIGLVKAGEYLRGLGDGAGIWEDE 388
Query: 303 ETRAFYECLPDLRAFVPAVLLGEAEHKA---NEPSVKPLE-------QPTDPASEPDQGQ 352
E R FYE L DL+ VP +LL + + K +E K ++ +PTD A DQ
Sbjct: 389 EERRFYENLVDLKGKVPGMLLEDGKKKKPENDEQVGKKIDAADVEAPKPTDAAD--DQSM 446
Query: 353 LAAQDT--AEVSADLGASPE 370
A T A+V A L PE
Sbjct: 447 AIANKTIGAQVDAVLARLPE 466
>gi|322693466|gb|EFY85325.1| nonsense-mediated mRNA decay factor (Upf2) [Metarhizium acridum
CQMa 102]
Length = 1130
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 167/385 (43%), Positives = 243/385 (63%), Gaps = 15/385 (3%)
Query: 403 EKDKEKAKDPDKEKGKEKDTERKV-ETEKEKLKGVE-----------GTNLDALLQRLPG 450
E + K D +++ GK D + ++ K + VE G +DALL RLP
Sbjct: 437 EDGRRKKADGEEQVGKRTDAVSEYSDSAKAAAEAVEDQSMAIANKTIGAQVDALLARLPE 496
Query: 451 CVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSS 510
++D+IDQ ++FC+LNSK++R RLV+AL VP+ +LLP +SR+VATL M DV
Sbjct: 497 LTNKDVIDQTAIDFCFLNSKASRNRLVKALTEVPKGRSDLLPSWSRLVATLGRYMPDVPK 556
Query: 511 MLIQMLEEEFNFLINKKDQMNI-ETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTH 569
L+ L+ EF L +K++ + + ++ NIR++ EL KF + P +VF CLK LDDF+
Sbjct: 557 GLVDYLDAEFRSLQRRKEKDFLGQVRLSNIRYLAELTKFGVVPEHVVFHCLKVSLDDFSR 616
Query: 570 HNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKP 629
NI++ CNL+E CGR+L ++PET+ RMA+ LE L R K+V+++ L++NA Y P
Sbjct: 617 MNIEILCNLIENCGRYLLKNPETAPRMASFLETLQRKKSVQHIGQPERMLIDNAVYYVDP 676
Query: 630 PERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVH 687
PER A K R P+ +I KL++SD+ K + +L+Q+R+L W + E S L K F K
Sbjct: 677 PERPAIEQKERTPMELFIAKLVYSDMTKRNYSKILKQIRRLHWEETEVVSILEKVFSKPG 736
Query: 688 KGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGE 747
K KYG IHL+ L + + RYH EF V V+D V+E + LGLE ND+ QRR+A +++LGE
Sbjct: 737 KVKYGNIHLLGILLSAVYRYHPEFVVKVIDNVIESVNLGLEQNDFRFFQRRIAEVKYLGE 796
Query: 748 LYNYEHVDSSVIFDTLYLILVFGHG 772
LYNY ++ VIFDT+Y IL FG+G
Sbjct: 797 LYNYRMLEHPVIFDTMYKILTFGYG 821
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 87/385 (22%), Positives = 153/385 (39%), Gaps = 74/385 (19%)
Query: 61 LKICSLLHQRYKDFSPC-LIDGLLKVFFPGKSGEDLDADRNL-----------KAMKKRS 108
++I S LHQR F P + L + G + D + ++L + ++R+
Sbjct: 108 VEIVSALHQR---FGPTEFTEYLAWLLGKGMATPDKTSLKSLAIDVREKEEKERITRQRA 164
Query: 109 TLKLLLELYFIGII---EDSSIFINIIKDLTS-----------------------IEHLK 142
L+++ EL+ +G++ +D++ + K + +E LK
Sbjct: 165 LLRVITELWLVGVVRTLDDATKPDDATKGAATGKAVELKNRASSTKAGGAAEPFPLEVLK 224
Query: 143 D---RDTTQTNLTLLASFARQ-GRIFLGL-PLSGPGQEIYEEFFKG-------------- 183
D D NL LL F + LG+ P G++ EE
Sbjct: 225 DLLGYDREHANLPLLVIFVKSFSWDILGIKPTGSDGRKTVEEDGATSSQNDILQVVDEAT 284
Query: 184 -LNITADQKKI--------FKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELS 234
LN T DQ+ F+K Y++ V + + S++ NA+ GE+
Sbjct: 285 ELNQTLDQQPFTPPDMAERFRKVLKKYFDDVAAHIVRDQKSIQSQARRNAEAYVKSGEVF 344
Query: 235 EENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASG---KD 291
E+ ++YEK K+ + L N +A+A+ + P + E +SG + +
Sbjct: 345 EDRQANYEKQVKAQERLVSNAQVIADAIGAEMPDLKESDDALASSSGSIGLVKTSEYLRT 404
Query: 292 SSVPEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASE-PDQ 350
+W DE+ R FYE L DL+ VP +LL + K + + + + TD SE D
Sbjct: 405 MGEGAGIWTDEDERRFYENLVDLKGKVPPILLEDGRRKKAD-GEEQVGKRTDAVSEYSDS 463
Query: 351 GQLAAQDTAEVSADLGASPEGKSVE 375
+ AA+ + S + G V+
Sbjct: 464 AKAAAEAVEDQSMAIANKTIGAQVD 488
>gi|195447352|ref|XP_002071176.1| GK25276 [Drosophila willistoni]
gi|194167261|gb|EDW82162.1| GK25276 [Drosophila willistoni]
Length = 1249
Score = 326 bits (836), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 218/717 (30%), Positives = 361/717 (50%), Gaps = 46/717 (6%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
+ + S LH Y DF ++ K S ++ + A K R L+L +L G
Sbjct: 161 VTLASKLHSTYADFDSQFLEAWQKTLSLKAS------EKIVNASKLRVDLRLFADLVSSG 214
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGL---PLSGPGQEI 176
+I + + ++ + +NL+++ SF R G + GL + Q+
Sbjct: 215 VIHMKPGLAQL--GIVLVQLIGQDKDDHSNLSIILSFCRHCGEEYAGLVPQKMLNLAQKY 272
Query: 177 YEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEE 236
E K + +D++ + Y+ A+ + + AE + L M + + KGE+S E
Sbjct: 273 GVEIPKSEFLPSDKQSNLRSMLKNYFKALCKYVLAEQSELMNMTKNIRRTMECKGEISTE 332
Query: 237 NSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASGKDSSVPE 296
+ ++ S+D L + SL+E L P + ++ + D S ++ +
Sbjct: 333 KREKCQMMQSSFDKLLTSAQSLSELLGEPLPELTQETECCNPGTVIDNMLDSATFGTL-D 391
Query: 297 PVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQ 356
P W D ET AFY LPDLR F+P A + ++ +E+P++ E + A
Sbjct: 392 P-WGDSETCAFYTDLPDLRQFLP-------NFSAPKVDLEQMEEPSELTEEAIDANIDAD 443
Query: 357 DTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEK 416
D ++ P + + +KE +E++ P K G E +++ ++
Sbjct: 444 DLNDLDD-----PPSTASDSIIEKEIEEQQL--QPQKPIKMGNALMELGRQQLQN----- 491
Query: 417 GKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCY-LNSKSNRKR 475
+T + + D L L CV+++LID +EF N+K RK+
Sbjct: 492 ----------QTNPSQSQSQLRQQFDIFLVNLFNCVNKELIDSAAIEFLLNFNTKPQRKK 541
Query: 476 LVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETK 535
L R +F+V RT L++LPY SR VA + C DV++ L ++L +EF + I KK+Q+NIE+K
Sbjct: 542 LTRTIFSVQRTRLDILPYLSRFVAIIHMCNTDVANDLAELLRKEFKWHIRKKNQLNIESK 601
Query: 536 IRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIR 595
++ +RFIGE+ KF + CLK L DF HH I++AC L+E G +LY ++ +
Sbjct: 602 VKIVRFIGEMVKFGLFKKFDALGCLKMLLRDFQHHQIEMACALVEVSGVYLYNCRDSRLL 661
Query: 596 MANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDL 655
M L+ ++RLK +D RH +E+ YYL KPPE S R + RP +H+YIR L+F +L
Sbjct: 662 MNVFLDQMLRLKTATAMDSRHSAQIESVYYLVKPPESSKRELQPRPIMHEYIRHLIFEEL 721
Query: 656 DKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAV 713
K ++E ++ LR++ W D E SY +KC K + ++ + +A L +GLS Y
Sbjct: 722 CKQNVERCIKMLRRINWQDPEICSYAIKCLSKAYLLRFPLVRCLADLVSGLSSYQPRAVT 781
Query: 714 AVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
++D V E+IR GLE++ M QRR+A ++LGE+YNY+ V+S+ I +TLYLI+ G
Sbjct: 782 IIIDNVFEDIRAGLEIHSPRMSQRRIAMAKYLGEMYNYKLVESTHILNTLYLIISLG 838
>gi|389628526|ref|XP_003711916.1| nonsense-mediated mRNA decay factor [Magnaporthe oryzae 70-15]
gi|351644248|gb|EHA52109.1| nonsense-mediated mRNA decay factor [Magnaporthe oryzae 70-15]
Length = 1125
Score = 326 bits (835), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 164/383 (42%), Positives = 239/383 (62%), Gaps = 13/383 (3%)
Query: 403 EKDKEKAKDPDKEKGKEKDTERKVETEKEKLKG----------VEGTNLDALLQRLPGCV 452
E K+K + D++ GK DT + K G +DA+L RLP +
Sbjct: 420 EDAKKKKAETDEQVGKRVDTPETTDIAKAAESADDQSTAIANKTTGAQVDAILLRLPDMI 479
Query: 453 SRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSML 512
++D +DQ ++FC+LNSK++R RLV+AL +VP+ +LLP+++R+VATL M D+ +
Sbjct: 480 TKDNVDQTAIDFCFLNSKASRNRLVKALTDVPKGRSDLLPFWARLVATLGQHMPDIPKGV 539
Query: 513 IQMLEEEFNFLINKKDQMNI-ETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHN 571
++ L+ EF L +KD+ + + ++ NIR++ EL KF I P +VF CLK L+DF+ N
Sbjct: 540 VEYLDAEFRSLQRRKDKDFLSQVRLSNIRYLAELTKFNIVPEHVVFHCLKVSLEDFSKMN 599
Query: 572 IDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPE 631
I+V CNLLE CGR+L R+PETS RM + L+ L R K+V+++ L+ENA Y PPE
Sbjct: 600 IEVICNLLENCGRYLLRNPETSPRMMSFLDTLQRKKSVQHIGQAEKMLIENAVYYVNPPE 659
Query: 632 RSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKG 689
R A K R P+ ++RKL++ DL K + VL+Q+R+L W + E + L K F K +
Sbjct: 660 RPAIEQKERTPMELFVRKLVYVDLSKRNYSKVLKQIRRLHWEEKEVVAILTKVFTKPGRV 719
Query: 690 KYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELY 749
KYG I+L+A L + +YH F V V+D ++E I GLE N++ QRR+A ++LGELY
Sbjct: 720 KYGNIYLLAILLGAICKYHVVFTVTVIDTLVESITFGLEQNEFKFNQRRIAEAKYLGELY 779
Query: 750 NYEHVDSSVIFDTLYLILVFGHG 772
NY D SVIFDT+Y IL FGHG
Sbjct: 780 NYRMFDHSVIFDTMYKILTFGHG 802
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 72/148 (48%), Gaps = 3/148 (2%)
Query: 188 ADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKS 247
A+ ++ F+ Y++ V+ L+ + ++ NA+ GE+ E+ ++++K K+
Sbjct: 281 AELQERFRNVLKRYFDDVKAHLERDQKAISNQSRRNAEAYVKSGEVFEDRQANFDKQVKA 340
Query: 248 YDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASG---KDSSVPEPVWDDEET 304
+ L N LA+ L + P + +D + +G + +W+DEE
Sbjct: 341 QERLVSNAQVLADMLGAEMPDLKDDTDPMANANASIGLVRTGEYLRGQGEGAGIWEDEEE 400
Query: 305 RAFYECLPDLRAFVPAVLLGEAEHKANE 332
R FYE L DL+ VPA+LL +A+ K E
Sbjct: 401 RRFYENLVDLKGKVPAILLEDAKKKKAE 428
>gi|440470954|gb|ELQ39993.1| hypothetical protein OOU_Y34scaffold00464g75 [Magnaporthe oryzae
Y34]
Length = 1138
Score = 326 bits (835), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 164/383 (42%), Positives = 239/383 (62%), Gaps = 13/383 (3%)
Query: 403 EKDKEKAKDPDKEKGKEKDTERKVETEKEKLKG----------VEGTNLDALLQRLPGCV 452
E K+K + D++ GK DT + K G +DA+L RLP +
Sbjct: 420 EDAKKKKAETDEQVGKRVDTPETTDIAKAAESADDQSTAIANKTTGAQVDAILLRLPDMI 479
Query: 453 SRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSML 512
++D +DQ ++FC+LNSK++R RLV+AL +VP+ +LLP+++R+VATL M D+ +
Sbjct: 480 TKDNVDQTAIDFCFLNSKASRNRLVKALTDVPKGRSDLLPFWARLVATLGQHMPDIPKGV 539
Query: 513 IQMLEEEFNFLINKKDQMNI-ETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHN 571
++ L+ EF L +KD+ + + ++ NIR++ EL KF I P +VF CLK L+DF+ N
Sbjct: 540 VEYLDAEFRSLQRRKDKDFLSQVRLSNIRYLAELTKFNIVPEHVVFHCLKVSLEDFSKMN 599
Query: 572 IDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPE 631
I+V CNLLE CGR+L R+PETS RM + L+ L R K+V+++ L+ENA Y PPE
Sbjct: 600 IEVICNLLENCGRYLLRNPETSPRMMSFLDTLQRKKSVQHIGQAEKMLIENAVYYVNPPE 659
Query: 632 RSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKG 689
R A K R P+ ++RKL++ DL K + VL+Q+R+L W + E + L K F K +
Sbjct: 660 RPAIEQKERTPMELFVRKLVYVDLSKRNYSKVLKQIRRLHWEEKEVVAILTKVFTKPGRV 719
Query: 690 KYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELY 749
KYG I+L+A L + +YH F V V+D ++E I GLE N++ QRR+A ++LGELY
Sbjct: 720 KYGNIYLLAILLGAICKYHVVFTVTVIDTLVESITFGLEQNEFKFNQRRIAEAKYLGELY 779
Query: 750 NYEHVDSSVIFDTLYLILVFGHG 772
NY D SVIFDT+Y IL FGHG
Sbjct: 780 NYRMFDHSVIFDTMYKILTFGHG 802
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 72/148 (48%), Gaps = 3/148 (2%)
Query: 188 ADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKS 247
A+ ++ F+ Y++ V+ L+ + ++ NA+ GE+ E+ ++++K K+
Sbjct: 281 AELQERFRNVLKRYFDDVKAHLERDQKAISNQSRRNAEAYVKSGEVFEDRQANFDKQVKA 340
Query: 248 YDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASG---KDSSVPEPVWDDEET 304
+ L N LA+ L + P + +D + +G + +W+DEE
Sbjct: 341 QERLVSNAQVLADMLGAEMPDLKDDTDPMANANASIGLVRTGEYLRGQGEGAGIWEDEEE 400
Query: 305 RAFYECLPDLRAFVPAVLLGEAEHKANE 332
R FYE L DL+ VPA+LL +A+ K E
Sbjct: 401 RRFYENLVDLKGKVPAILLEDAKKKKAE 428
>gi|125983564|ref|XP_001355547.1| GA15324 [Drosophila pseudoobscura pseudoobscura]
gi|54643863|gb|EAL32606.1| GA15324 [Drosophila pseudoobscura pseudoobscura]
Length = 1227
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 225/735 (30%), Positives = 363/735 (49%), Gaps = 62/735 (8%)
Query: 63 ICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIGII 122
+ S LH Y DF ++ KV ++ A++ K R L+L EL G+I
Sbjct: 152 LSSRLHATYVDFDTHFLEAWQKVL-------NIKAEKISNPSKLRVDLRLFAELISSGVI 204
Query: 123 EDSS-------IFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGLPLSGPGQ 174
+ + + +I +D+D N +++ SF R G + GL Q
Sbjct: 205 QMKPGLALLGMVLVQLIG--------QDKDG-HNNFSIILSFCRHCGEEYAGLVPQKMQQ 255
Query: 175 EIYE---EFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKG 231
+ E K + AD++ + Y+ A+ + + AE T L M + + KG
Sbjct: 256 LALKYGVEVPKSDFLAADKQANLRTMLKGYFKALCKHVLAEQTELMNMTKNIRRTMECKG 315
Query: 232 ELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASGKD 291
E+S E E ++ S+D L + +L+E L P + ++ E SP + D
Sbjct: 316 EISSEKREKCEMMQASFDKLLASAQTLSELLAEPLPELAKE--------SECCSPGTVID 367
Query: 292 S-------SVPEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDP 344
+ V +P W DEETRAFY LPDLR F+P + A + ++ +E+P++
Sbjct: 368 NMLDSAACGVLDP-WGDEETRAFYTDLPDLRQFLP-------DFSAPKVDLETMEEPSEL 419
Query: 345 ASEPDQGQLAAQDTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEK 404
E L A+ + + P +++ + ++ P G +
Sbjct: 420 TEEAIDANLDAEMDIDDPPSTNSDPPSENIAE-------DQPPPSTPPLLATTGSSANDL 472
Query: 405 DKEKAKDPDKEKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEF 464
+K E G+++ + T + + + D L L CV+++LID +EF
Sbjct: 473 KPQKMCSALMELGRQQLQSQPQTTAQTQQQIR--QQFDIFLVNLFNCVNKELIDSAAIEF 530
Query: 465 CY-LNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFL 523
N+K RK+L R +F+V RT L++LPY SR +A + C DV++ L ++L +EF +
Sbjct: 531 LLNFNTKHQRKKLTRTIFSVQRTRLDILPYLSRFMAIVHMCNTDVAADLSELLRKEFKWH 590
Query: 524 INKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCG 583
I KK+Q+NIE+K++ +RFIGE KF + CLK L DF HH I++AC +E G
Sbjct: 591 IRKKNQLNIESKLKIVRFIGEQVKFGLFKKFDALGCLKMLLRDFQHHQIEMACAFVEVTG 650
Query: 584 RFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPL 643
+LY ++ + M L+ ++RLK +D RH +E+ YYL KPPE S R S RP +
Sbjct: 651 VYLYNCRDSRLLMNVFLDQMLRLKMATAMDSRHAAQIESVYYLVKPPESSKRESAPRPVI 710
Query: 644 HQYIRKLLFSDLDKSSIEHVLRQLRKLPW--SDCESYLLKCFMKVHKGKYGQIHLIASLT 701
H+YIR L+F +L K ++E ++ LR++ W D Y +KC K ++ I +A L
Sbjct: 711 HEYIRHLIFEELCKQNVERCIKMLRRINWLDPDTSGYAIKCLSKAFLLRFPLIRCLADLV 770
Query: 702 AGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFD 761
+GLS Y V+D V E+IR GLE++ M QRR+A ++LGE+YNY+ V+S+ I +
Sbjct: 771 SGLSSYQPRAVTIVIDNVFEDIRAGLEIHSPRMAQRRIAMAKYLGEMYNYKLVESTHILN 830
Query: 762 TLYLILVFGHGTAET 776
TLY I+ G T ++
Sbjct: 831 TLYSIISLGVSTDQS 845
>gi|440488277|gb|ELQ68008.1| hypothetical protein OOW_P131scaffold00270g13 [Magnaporthe oryzae
P131]
Length = 1124
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 164/383 (42%), Positives = 239/383 (62%), Gaps = 13/383 (3%)
Query: 403 EKDKEKAKDPDKEKGKEKDTERKVETEKEKLKG----------VEGTNLDALLQRLPGCV 452
E K+K + D++ GK DT + K G +DA+L RLP +
Sbjct: 406 EDAKKKKAETDEQVGKRVDTPETTDIAKAAESADDQSTAIANKTTGAQVDAILLRLPDMI 465
Query: 453 SRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSML 512
++D +DQ ++FC+LNSK++R RLV+AL +VP+ +LLP+++R+VATL M D+ +
Sbjct: 466 TKDNVDQTAIDFCFLNSKASRNRLVKALTDVPKGRSDLLPFWARLVATLGQHMPDIPKGV 525
Query: 513 IQMLEEEFNFLINKKDQMNI-ETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHN 571
++ L+ EF L +KD+ + + ++ NIR++ EL KF I P +VF CLK L+DF+ N
Sbjct: 526 VEYLDAEFRSLQRRKDKDFLSQVRLSNIRYLAELTKFNIVPEHVVFHCLKVSLEDFSKMN 585
Query: 572 IDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPE 631
I+V CNLLE CGR+L R+PETS RM + L+ L R K+V+++ L+ENA Y PPE
Sbjct: 586 IEVICNLLENCGRYLLRNPETSPRMMSFLDTLQRKKSVQHIGQAEKMLIENAVYYVNPPE 645
Query: 632 RSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKG 689
R A K R P+ ++RKL++ DL K + VL+Q+R+L W + E + L K F K +
Sbjct: 646 RPAIEQKERTPMELFVRKLVYVDLSKRNYSKVLKQIRRLHWEEKEVVAILTKVFTKPGRV 705
Query: 690 KYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELY 749
KYG I+L+A L + +YH F V V+D ++E I GLE N++ QRR+A ++LGELY
Sbjct: 706 KYGNIYLLAILLGAICKYHVVFTVTVIDTLVESITFGLEQNEFKFNQRRIAEAKYLGELY 765
Query: 750 NYEHVDSSVIFDTLYLILVFGHG 772
NY D SVIFDT+Y IL FGHG
Sbjct: 766 NYRMFDHSVIFDTMYKILTFGHG 788
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 71/145 (48%), Gaps = 11/145 (7%)
Query: 188 ADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKS 247
A+ ++ F+ Y++ V+ L+ + ++ NA+ GE+ E+ ++++K K+
Sbjct: 281 AELQERFRNVLKRYFDDVKAHLERDQKAISNQSRRNAEAYVKSGEVFEDRQANFDKQVKA 340
Query: 248 YDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASGKDSSVPEPVWDDEETRAF 307
+ L N A D P+ + V +GE G+ + + W+DEE R F
Sbjct: 341 QERLVSN------AQDDTDPMANANASIGLVRTGEYLR-GQGEGAGI----WEDEEERRF 389
Query: 308 YECLPDLRAFVPAVLLGEAEHKANE 332
YE L DL+ VPA+LL +A+ K E
Sbjct: 390 YENLVDLKGKVPAILLEDAKKKKAE 414
>gi|407921020|gb|EKG14189.1| MIF4G-like type 3 [Macrophomina phaseolina MS6]
Length = 1220
Score = 325 bits (834), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 160/338 (47%), Positives = 225/338 (66%), Gaps = 5/338 (1%)
Query: 438 GTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRM 497
G +DALL RLP VS+D +D +EFC+LNSK++R RL++A+ +P+ +LLP Y+R+
Sbjct: 443 GAQVDALLARLPEFVSKDQVDDTAIEFCFLNSKASRNRLIKAVSEIPKGRTDLLPLYARL 502
Query: 498 VATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIR--NIRFIGELCKFKIAPAGL 555
VATL M DV ++ L++EF L +K Q + ++R N+R++ EL KF P +
Sbjct: 503 VATLGKYMPDVIQGIVAYLDDEFRSLQRRK-QKDFLGQVRMINVRYLAELTKFGAVPEHV 561
Query: 556 VFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPR 615
+F CLK LDDF+ NI++ CNLLE CGR+L R+PETS RMA+ LE L R K +L +
Sbjct: 562 IFHCLKVSLDDFSRMNIEIICNLLENCGRYLLRNPETSPRMASFLETLQRKKAASHLGQQ 621
Query: 616 HVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDC 675
L+ENA Y PPER+A K R PL ++RKL++ DL K +++ V++Q+RKL W +
Sbjct: 622 ERMLIENAMYYVNPPERAAIEQKERTPLELFLRKLIYLDLTKRNLDKVVKQIRKLHWEEE 681
Query: 676 E--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYG 733
E L K F K K KY IHL+A + L+R+H +F ++V+D++LE I GLELND+
Sbjct: 682 EVVDMLHKIFTKPGKIKYSNIHLLAVILGSLNRHHQDFCISVIDDLLENITFGLELNDFK 741
Query: 734 MQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
QRR+A +++LGELY Y VDS VIFDTLY I+ FGH
Sbjct: 742 FNQRRVAEVKYLGELYIYRMVDSPVIFDTLYKIVTFGH 779
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 63/136 (46%), Gaps = 3/136 (2%)
Query: 191 KKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDH 250
++ FK + Y+ V+ L + L NA+ GE+ E+ ++YEK K+ +
Sbjct: 256 RQRFKNILNRYFEDVKAHLTRDQEKLVNQGRRNAEAYVKSGEVFEDRQANYEKQVKAQEK 315
Query: 251 LYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASG---KDSSVPEPVWDDEETRAF 307
L N LA+A+ + P + E + G +G + +W+DEE R F
Sbjct: 316 LLANAQVLADAIGAEMPDLKEKDTSNNAGDGSIGLVKAGEYLRGQGEGPGIWEDEEERRF 375
Query: 308 YECLPDLRAFVPAVLL 323
YE L DL+ VP +LL
Sbjct: 376 YENLIDLKDRVPGILL 391
>gi|189198007|ref|XP_001935341.1| nonsense-mediated mRNA decay factor (Upf2) [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187981289|gb|EDU47915.1| nonsense-mediated mRNA decay factor (Upf2) [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 1173
Score = 325 bits (833), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 164/394 (41%), Positives = 249/394 (63%), Gaps = 10/394 (2%)
Query: 382 EKEKEKAKDPDKEKGKGKDKEEK--DKEKAKDPDKEKGKEKDTERKVETEKEKLKGVEGT 439
E+ K+K D D++ GK + + DKE A+ K E + + K G
Sbjct: 420 EEVKKKKTDSDEQVGKKMEAKPDTVDKEVAETTADNKAAEGEDQSTAIANKSV-----GA 474
Query: 440 NLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVA 499
+DALL RLP ++D +DQ ++FC+LNSK++R RL++A+ +P+ +LLP YSR++A
Sbjct: 475 QVDALLARLPELATKDAVDQTAMDFCFLNSKASRNRLIKAIQEIPKGRSDLLPLYSRLIA 534
Query: 500 TLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNI-ETKIRNIRFIGELCKFKIAPAGLVFS 558
TL M DVS L+ L+EEF L +K + + + + +N+R++ EL KF + P ++F
Sbjct: 535 TLGKYMSDVSQGLVSYLDEEFRSLQRRKSKDFLGQVRTQNVRYLAELTKFGVVPEHVIFH 594
Query: 559 CLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVT 618
CLK LDDF+ NI++ CNLLE CGR+L R+PETS RMA+ LE L R K+ + + +
Sbjct: 595 CLKVSLDDFSRMNIEIICNLLENCGRYLLRNPETSPRMASFLETLQRKKSAQVIGQQERM 654
Query: 619 LVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPW--SDCE 676
L+ENA Y PPER+A K R P Q++RK+++ DL + S++ ++Q+RK+ W D
Sbjct: 655 LIENAVYYVNPPERAAIEQKERTPTEQFLRKIMYQDLTRRSLDKTIKQVRKMHWEEEDVV 714
Query: 677 SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQ 736
+ L K F K K KY IHL+A + + R+H +FA++V+D++LE I GLELND+ Q
Sbjct: 715 NLLHKVFAKPGKIKYSNIHLLAVMLGTIHRFHQDFAISVIDDLLESITFGLELNDFKFNQ 774
Query: 737 RRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
RR++ +++LGELY Y VDS +IFDT+Y +L +G
Sbjct: 775 RRISEVKYLGELYIYRLVDSPLIFDTMYKLLNYG 808
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 90/189 (47%), Gaps = 15/189 (7%)
Query: 186 ITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLR 245
I+ D ++ FK + Y+ V+ L + + +NA+ GE+ E+ S+YEK
Sbjct: 279 ISPDLQQRFKNILNRYFEDVKTHLLRDQKHILSQGRKNAEAYVKSGEVFEDRQSNYEKQM 338
Query: 246 KSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASG---KDSSVPEPVWDDE 302
KS + L N LA+AL + P + E + G +G + S +W+DE
Sbjct: 339 KSQERLVSNAQVLADALGAEMPDLKEKDSSANTGDGSIGLIKTGEYLRGQSDGAGIWEDE 398
Query: 303 ETRAFYECLPDLRAFVPAVLLGEAEHK---ANEPSVKPLEQPTDPASEPDQGQLAAQDTA 359
E R FYE L DL+ VP +LL E + K ++E K +E ++PD ++ A
Sbjct: 399 EERRFYENLIDLKDRVPGILLEEVKKKKTDSDEQVGKKME------AKPD---TVDKEVA 449
Query: 360 EVSADLGAS 368
E +AD A+
Sbjct: 450 ETTADNKAA 458
Score = 43.1 bits (100), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 65/154 (42%), Gaps = 24/154 (15%)
Query: 497 MVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLV 556
M+ T+ +D + +I L E F + D + +I ++++GEL +++ + L+
Sbjct: 738 MLGTIHRFHQDFAISVIDDLLESITFGLELNDFKFNQRRISEVKYLGELYIYRLVDSPLI 797
Query: 557 FSCLKACL--------------------DDFTHHNIDVACNLLETCGRFLYRSPETSIRM 596
F + L DD+ I + CNLLETCG + Y T ++
Sbjct: 798 FDTMYKLLNYGWEGGYAKPGSYNPLDLPDDY--FRIRLVCNLLETCGMY-YDKGATKKKL 854
Query: 597 ANMLEILMRLKNVKNLDPRHVT-LVENAYYLCKP 629
L L K P V LV++AY L +P
Sbjct: 855 DFFLTYLQYYVCTKEALPMDVEFLVQDAYSLVRP 888
>gi|330907031|ref|XP_003295685.1| hypothetical protein PTT_02291 [Pyrenophora teres f. teres 0-1]
gi|311332836|gb|EFQ96224.1| hypothetical protein PTT_02291 [Pyrenophora teres f. teres 0-1]
Length = 1180
Score = 325 bits (832), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 165/396 (41%), Positives = 251/396 (63%), Gaps = 14/396 (3%)
Query: 382 EKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEKDTERKVETEKEKL----KGVE 437
E+ K+K D D++ GK K + K DKE + + + E + K V
Sbjct: 420 EEVKKKKADSDEQVGK------KIEAKPDAVDKEAAETSADTKAADGEDQSTAIANKSV- 472
Query: 438 GTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRM 497
G +DALL RLP ++D +DQ ++FC+LNSK++R RL++A+ +P+ +LLP YSR+
Sbjct: 473 GAQVDALLARLPELATKDAVDQTAMDFCFLNSKASRNRLIKAVQEIPKGRSDLLPLYSRL 532
Query: 498 VATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNI-ETKIRNIRFIGELCKFKIAPAGLV 556
+ATL M DVS L+ L+EEF L +K + + + + +N+R++ EL KF + P ++
Sbjct: 533 IATLGKYMSDVSQGLVSYLDEEFRSLQRRKSKDFLGQIRTQNVRYLAELTKFGVVPEHVI 592
Query: 557 FSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRH 616
F CLK LDDF+ NI++ CNLLE CGR+L R+PETS RMA+ LE L R K+ + + +
Sbjct: 593 FHCLKVSLDDFSRMNIEIICNLLENCGRYLLRNPETSPRMASFLETLQRKKSAQVIGQQE 652
Query: 617 VTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPW--SD 674
L+ENA Y PPER+A K R P+ Q++RK+++ DL + S++ ++Q+RK+ W D
Sbjct: 653 RMLIENAVYYVNPPERAAIEQKERTPIEQFLRKIMYQDLTRRSLDKTIKQVRKMHWEEED 712
Query: 675 CESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGM 734
+ L K F K K KY IHL+A + + R+H +FA++V+D++LE I GLELND+
Sbjct: 713 VVNLLHKVFAKPGKIKYSNIHLLAVMLGTIHRFHQDFAISVIDDLLESITFGLELNDFKF 772
Query: 735 QQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
QRR++ +++LGELY Y VDS +IFDT+Y +L +G
Sbjct: 773 NQRRISEVKYLGELYIYRLVDSPLIFDTMYKLLNYG 808
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 89/189 (47%), Gaps = 15/189 (7%)
Query: 186 ITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLR 245
I+ D ++ FK Y+ V+ L + + +NA+ GE+ E+ S+YEK
Sbjct: 279 ISPDLQQRFKNILTRYFEDVKTHLLRDQKHILNQGRKNAEAYVKSGEVFEDRQSNYEKQM 338
Query: 246 KSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASG---KDSSVPEPVWDDE 302
KS + L N LA+AL + P + E + G +G + S +W+DE
Sbjct: 339 KSQERLVSNAQVLADALGAEMPDLKEKDSSANTGDGSIGLIKTGEYLRGQSDGAGIWEDE 398
Query: 303 ETRAFYECLPDLRAFVPAVLLGEAEHK---ANEPSVKPLEQPTDPASEPDQGQLAAQDTA 359
E R FYE L DL+ VP +LL E + K ++E K +E ++PD ++ A
Sbjct: 399 EERRFYENLIDLKDRVPGILLEEVKKKKADSDEQVGKKIE------AKPD---AVDKEAA 449
Query: 360 EVSADLGAS 368
E SAD A+
Sbjct: 450 ETSADTKAA 458
Score = 40.8 bits (94), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 64/154 (41%), Gaps = 24/154 (15%)
Query: 497 MVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLV 556
M+ T+ +D + +I L E F + D + +I ++++GEL +++ + L+
Sbjct: 738 MLGTIHRFHQDFAISVIDDLLESITFGLELNDFKFNQRRISEVKYLGELYIYRLVDSPLI 797
Query: 557 FSCLKACL--------------------DDFTHHNIDVACNLLETCGRFLYRSPETSIRM 596
F + L DD+ I + CNLLETCG + Y ++
Sbjct: 798 FDTMYKLLNYGWEGGYARPGSYNPLDLPDDY--FRIRLVCNLLETCGMY-YDKGAAKKKL 854
Query: 597 ANMLEILMRLKNVKNLDPRHVT-LVENAYYLCKP 629
L L K P V +V++AY L +P
Sbjct: 855 DFFLTYLQYYVCTKEALPMDVEFIVQDAYSLVRP 888
>gi|171688540|ref|XP_001909210.1| hypothetical protein [Podospora anserina S mat+]
gi|170944232|emb|CAP70342.1| unnamed protein product [Podospora anserina S mat+]
Length = 1240
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 161/378 (42%), Positives = 241/378 (63%), Gaps = 4/378 (1%)
Query: 399 KDKEEKDKEKAKDPDKEKGKEKDTERKVETEKEKLKG-VEGTNLDALLQRLPGCVSRDLI 457
K K+ +D++ K D + + K E V+ + + G +DALL RLP S+D I
Sbjct: 436 KKKKAEDEQVGKKIDPAEVEAKQAEAAVDEQSMAIANKTIGAQVDALLARLPDLTSKDAI 495
Query: 458 DQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLE 517
DQ ++FC+LNSK++R RL++AL +VP+ +LLP +SR+VATL M D+ L+ L+
Sbjct: 496 DQTAIDFCFLNSKASRNRLIKALTDVPKGRGDLLPSWSRLVATLGQYMPDIPKGLVDYLD 555
Query: 518 EEFNFLINKKDQMNI-ETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVAC 576
EF L +K++ + + ++ NIR++ EL KF I P +VF CLK LDDF+ NI++ C
Sbjct: 556 AEFRSLQRRKEKEFLGQVRLGNIRYLAELTKFGIVPEHVVFHCLKVSLDDFSRMNIEIIC 615
Query: 577 NLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARV 636
NLLE CGR+L R+PETS RMA+ LE L R K+V+++ LVENA Y PP+R A
Sbjct: 616 NLLENCGRYLLRNPETSPRMASFLETLQRKKSVQHIGQAERMLVENAVYYVDPPQRPAIQ 675
Query: 637 SKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQI 694
K R P+ ++RKL+++DL K + V+RQ+R+L W + E + L K K K KY I
Sbjct: 676 QKERTPIELFVRKLVYTDLTKRNYSKVVRQIRRLHWEEKEVVTILHKVLSKPGKVKYSNI 735
Query: 695 HLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHV 754
HL+ + + + RYH+EF ++V+D V+E + GLE N++ QRR+A +++L E+YNY +
Sbjct: 736 HLLVVILSAIHRYHNEFVISVIDTVIESVVFGLEQNNFEFNQRRIAEVKYLAEMYNYRML 795
Query: 755 DSSVIFDTLYLILVFGHG 772
D VIF+ +Y I+ FGHG
Sbjct: 796 DHPVIFEIMYKIMTFGHG 813
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 81/180 (45%), Gaps = 8/180 (4%)
Query: 194 FKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYR 253
F+ Y+ V+ L + ++ +NA+ GE+ E+ +++EK K+ + L
Sbjct: 300 FRNVLRRYFEDVKGHLVRDQKAIFSQSRKNAEAYVKSGEVFEDRQANFEKQVKAQERLVA 359
Query: 254 NVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASG---KDSSVPEPVWDDEETRAFYEC 310
N +AE + + P + + +G +G + +W+DEE R FYE
Sbjct: 360 NAHVIAEIIGAEMPELKDSDDANANANGSIGIVKAGEYLRGQGDGSGIWEDEEERRFYEN 419
Query: 311 LPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPAS-EPDQGQLAA--QDTAEVSADLGA 367
L DL+ VP +LL E + K E + + + DPA E Q + A Q A + +GA
Sbjct: 420 LVDLKGKVPGMLLEEVKKKKAED--EQVGKKIDPAEVEAKQAEAAVDEQSMAIANKTIGA 477
>gi|358398990|gb|EHK48341.1| hypothetical protein TRIATDRAFT_238108 [Trichoderma atroviride IMI
206040]
Length = 1114
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 166/383 (43%), Positives = 243/383 (63%), Gaps = 6/383 (1%)
Query: 394 EKGKGKDKEEKDKEKAKDPDKEKGKE--KDTERKVETEKEKLKGVEGTNLDALLQRLPGC 451
E GK K K E +++ AK PD + E K E + G +DA+L RLP
Sbjct: 406 EDGK-KKKTETEEQPAKKPDSAESSEPIKAAEPIDDQSMAIANKTIGAQVDAILARLPDL 464
Query: 452 VSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSM 511
++++IDQ ++FC+LNSK++R RLV+AL VP+ +LLP ++R+VATL M DV
Sbjct: 465 TNKEIIDQTAIDFCFLNSKASRNRLVKALTEVPKGRSDLLPSWARLVATLGRYMPDVPKG 524
Query: 512 LIQMLEEEFNFLINKKDQMNI-ETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHH 570
L+ L+ EF L +K++ + + ++ NIR++ EL KF + P +VF CLK LDDF+
Sbjct: 525 LVDYLDAEFRSLQRRKEKDFLGQVRLSNIRYLAELTKFGVVPEHVVFHCLKVSLDDFSRM 584
Query: 571 NIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPP 630
NI++ CNL+E CGR+L R+PET+ RMA+ LE L R K+V+++ L++NA Y PP
Sbjct: 585 NIEILCNLIENCGRYLLRNPETAPRMASFLETLQRKKSVQHIGQPERMLIDNAVYHVDPP 644
Query: 631 ERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHK 688
ER A K R P+ +IRKL++ D+ K + +L+Q+R+L W + E + L K F K K
Sbjct: 645 ERPAIEQKERTPMELFIRKLIYGDMTKRNYSKILKQIRRLHWEEAEVVAILEKVFSKPGK 704
Query: 689 GKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGEL 748
KYG IHL+A L + L R+H F V ++D VLE I GLE ND+ QRR+A +++LGEL
Sbjct: 705 VKYGNIHLLAILLSALYRHHPHFVVKIIDNVLESISFGLEQNDFRFSQRRVAEVKYLGEL 764
Query: 749 YNYEHVDSSVIFDTLYLILVFGH 771
YNY ++ VIFDT+Y I++FG+
Sbjct: 765 YNYRMLEHPVIFDTMYKIVLFGY 787
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 157/379 (41%), Gaps = 73/379 (19%)
Query: 61 LKICSLLHQRYKDFSPC-LIDGLLKVFFPGKSGEDLDADRNLKA-----------MKKRS 108
++I S LHQR F P + L + G + D ++L A ++R+
Sbjct: 89 VEIVSALHQR---FGPTEFTEYLTWLLGKGMATPDKGILKSLPAEVREKEEKERITRQRA 145
Query: 109 TLKLLLELYFIGII---EDSSIFINIIKDLTS---------------------IEHLKD- 143
L+++ EL+ +G++ +D+S + K T +E LKD
Sbjct: 146 LLRVITELWLVGVLRTLDDASKPDDATKGATGKAPELKTRNSSKVGGSADPFPLEVLKDL 205
Query: 144 --RDTTQTNLTLLASFARQ-GRIFLGLPLSGPGQEIYEEFFKGLNITADQKKI------- 193
D NL LL F + LG+ + P + L +T D K +
Sbjct: 206 LGYDREHANLPLLVIFVKAFSWDILGIRTTTPESRKPGDD-DSLPVTDDTKDLSAEDQPF 264
Query: 194 --------FKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLR 245
FK+ Y++ V + + S+ NA+ GE+ E+ ++YEK
Sbjct: 265 TSPELADKFKEILKKYFDDVANHIVRDQKSIHLQARRNAEAYVKSGEVFEDRQANYEKQV 324
Query: 246 KSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASG---KDSSVPEPVWDDE 302
K+ D L N +A+A+ + P + + ++ +G + + +W+DE
Sbjct: 325 KAQDRLVANAQVIADAIGAEMPNLKDSNDPLAASNNSIGLVKTGDYLRSMADGAGIWEDE 384
Query: 303 ETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQP-----TDP--ASEP--DQGQL 353
+ R FYE L DL+ +PA+LL + + K E +P ++P ++P A+EP DQ
Sbjct: 385 DERRFYENLVDLKGKIPAILLEDGKKKKTETEEQPAKKPDSAESSEPIKAAEPIDDQSMA 444
Query: 354 AAQDT--AEVSADLGASPE 370
A T A+V A L P+
Sbjct: 445 IANKTIGAQVDAILARLPD 463
>gi|342877971|gb|EGU79385.1| hypothetical protein FOXB_10109 [Fusarium oxysporum Fo5176]
Length = 1136
Score = 324 bits (830), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 164/383 (42%), Positives = 240/383 (62%), Gaps = 13/383 (3%)
Query: 403 EKDKEKAKDPDKEKGKEKD------TERKVETEKEKLKGVE----GTNLDALLQRLPGCV 452
E K+K D D++ GK+ D + ET ++ + G +DALL RLP
Sbjct: 415 EDGKKKKTDTDEQVGKKVDPSEASEAPKTAETADDQSTSIANRTIGAQVDALLARLPELT 474
Query: 453 SRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSML 512
++D+ DQ ++FC+LNSK++R RLV+AL VP+ +LLP +SR+VATL M DV L
Sbjct: 475 NKDIADQTAIDFCFLNSKASRNRLVKALTEVPKGRSDLLPSWSRLVATLGRYMPDVPKGL 534
Query: 513 IQMLEEEFNFLINKKDQMNI-ETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHN 571
+ L+ EF L +K++ + + ++ NIR++ EL KF I P +VF CLK LDDF+ N
Sbjct: 535 VDYLDAEFRSLQRRKEKDFLGQVRLSNIRYLAELTKFGIVPEHVVFHCLKVSLDDFSRMN 594
Query: 572 IDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPE 631
I++ CNL+E CGR+L R+PET+ RM + LE L R K+V+++ L++NA Y PPE
Sbjct: 595 IEILCNLIENCGRYLLRNPETAPRMMSFLETLQRKKSVQHIGQPERMLIDNAVYYVDPPE 654
Query: 632 RSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKG 689
R A K R P+ ++RKL++ D+ K + +L+Q+R+L W + E + L K F K K
Sbjct: 655 RLAIEQKERTPMELFVRKLIYVDMTKRNYSKILKQIRRLHWEETEVVAILEKVFSKPGKV 714
Query: 690 KYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELY 749
KYG +HL+ L + L RYH F V V+D V+E + GLE NDY QRR+A +++LGELY
Sbjct: 715 KYGSVHLLGILLSALYRYHPAFVVKVIDNVIESMTFGLEQNDYRFYQRRIAEVKYLGELY 774
Query: 750 NYEHVDSSVIFDTLYLILVFGHG 772
NY ++ VIFDT+Y I+ FG+G
Sbjct: 775 NYRMLEHPVIFDTMYKIMTFGYG 797
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 84/377 (22%), Positives = 156/377 (41%), Gaps = 73/377 (19%)
Query: 61 LKICSLLHQRY--KDFSPCLI-----------DGLLKVFFPGKSGEDLDADRNLKAMKKR 107
++I S LHQR+ +F+ L G+LK P + + + +++R
Sbjct: 93 VEIVSALHQRFGPNEFTEYLAWLLGKGMATPDKGILKTLAPEVR----EKEEKERIIRQR 148
Query: 108 STLKLLLELYFIGII---EDSSIFINIIKDLTS-------------------IEHLKD-- 143
+ L+++ EL+ +G+I +D S + K +E LKD
Sbjct: 149 ALLRVVTELWLVGVIRTLDDVSRPDDATKGAAGKTPELKTRTNKGTGAEPFPLEVLKDLL 208
Query: 144 -RDTTQTNLTLLASFARQ-GRIFLGL-PLSGPGQEIYEE-------------FFKGLNIT 187
D NL LL F + LG+ P G++ EE +
Sbjct: 209 GHDREHANLPLLVIFVKSFSWDILGVKPTGADGRKTVEEDGTTEGNEAEDGNSGNEASPD 268
Query: 188 ADQ-------KKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSS 240
ADQ + F+ Y++ V+ + + S++ NA+ GE+ E+ ++
Sbjct: 269 ADQPFTEPEMRDRFRSILKKYFDDVKGHITRDQKSIQSQARRNAEAYVKSGEVFEDRQAN 328
Query: 241 YEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASG---KDSSVPEP 297
YEK K+ + L N +A+A+ + P + + + ++G +G +
Sbjct: 329 YEKQVKAQERLVSNAQVIADAIGAEMPDLKDSDDSFAASNGSIGLVKTGDYLRSMGDGAG 388
Query: 298 VWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQD 357
+W+DE+ R FYE L DL+ VPA+LL + + K + + + + + DP+ + A
Sbjct: 389 IWEDEDERRFYENLVDLKGKVPAILLEDGKKKKTD-TDEQVGKKVDPSEASE-----APK 442
Query: 358 TAEVSADLGASPEGKSV 374
TAE + D S +++
Sbjct: 443 TAETADDQSTSIANRTI 459
>gi|195397325|ref|XP_002057279.1| GJ16435 [Drosophila virilis]
gi|194147046|gb|EDW62765.1| GJ16435 [Drosophila virilis]
Length = 1268
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 226/739 (30%), Positives = 367/739 (49%), Gaps = 65/739 (8%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKK-------RSTLKLL 113
+ + S LH Y DF+ ++ K N+KA +K R L+L
Sbjct: 160 VTLASKLHCTYADFNTQFLEAWQKAL-------------NIKATEKISNPSKLRVDLRLF 206
Query: 114 LELYFIGIIEDS---SIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGL-- 167
EL G+I+ ++ ++ L + +D+D +N +++ SF R G + GL
Sbjct: 207 AELVSSGVIQMKPGLALLGMVLVQLIA----QDKDD-HSNFSIILSFCRHCGEEYAGLVP 261
Query: 168 -PLSGPGQEIYEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKI 226
+ + E K ++AD++ + Y+ A+ + + AE +L M +
Sbjct: 262 QKMQQLANKYQVEVPKSDFLSADKQLNLRTMLKGYFKALCKHVLAEQAALMNMTKNIRRT 321
Query: 227 LNAKGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASP 286
+ KGE+S+E E ++ S+D L + SL+E L P + ++ + D
Sbjct: 322 MECKGEISQEKREKCELMQASFDKLLASAQSLSELLGEPLPELTKESECCNPGTVIDNML 381
Query: 287 ASGKDSSVPEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPAS 346
S ++ +P W DEETRAFY LPDLR F+P A + ++ LE+P++
Sbjct: 382 DSAAFGTL-DP-WGDEETRAFYTDLPDLRQFLP-------NFSAPKVDLETLEEPSELTE 432
Query: 347 EPDQGQLAAQDTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDK 406
E + A AE+ D P + + DKE ++E+
Sbjct: 433 EA----IDANIDAELDMD---DPPSTASDTALDKE--QEEQPTAATPTAEAAATAGAAAT 483
Query: 407 EKAKDPDKEKGK------------EKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSR 454
DK+ G ++ + + + + + D L L CV++
Sbjct: 484 APVVPIDKKMGSALMELGRQQQQQQQQQQTQQQQQAQSQSQQLRQQFDVFLLNLFNCVNK 543
Query: 455 DLIDQLTVEFCY-LNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLI 513
+LID +EF N+K RK+L + +F+V RT L++LPY SR VA + C DV++ L
Sbjct: 544 ELIDSAAIEFLLNYNTKHQRKKLTKTIFSVQRTRLDILPYLSRFVAIVHMCNTDVAADLS 603
Query: 514 QMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNID 573
+L +EF + I KK+Q+NIE+K++ +RFIGEL KF + CLK L DF HH+I+
Sbjct: 604 DLLRKEFKWHIRKKNQLNIESKLKIVRFIGELVKFGLFKKFDALGCLKMLLRDFIHHHIE 663
Query: 574 VACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERS 633
+AC +E G +LY ++ + M L+ ++R+K +D RH +E+ YYL KPPE +
Sbjct: 664 MACAFVEVSGVYLYNCRDSRLLMNVFLDQMLRMKTATAMDSRHAAQIESVYYLVKPPESA 723
Query: 634 ARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKY 691
R RPP+H+YIR L+F +L K ++E ++ LR++ W D E SY +KC K + ++
Sbjct: 724 KREITPRPPMHEYIRHLIFEELCKQNVERCIKMLRRINWQDPEISSYAIKCLSKAYLLRF 783
Query: 692 GQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNY 751
I +A L +GLS Y V+D V E+IR GLE++ M QRR+A ++LGE+YNY
Sbjct: 784 PLIRCLADLVSGLSSYQPRAVTIVIDNVFEDIRAGLEIHSPKMSQRRIAMAKYLGEMYNY 843
Query: 752 EHVDSSVIFDTLYLILVFG 770
+ V+S+ I +TLY I+ G
Sbjct: 844 KLVESTHILNTLYSIISLG 862
>gi|296812331|ref|XP_002846503.1| nonsense-mediated mRNA decay protein 2 [Arthroderma otae CBS
113480]
gi|238841759|gb|EEQ31421.1| nonsense-mediated mRNA decay protein 2 [Arthroderma otae CBS
113480]
Length = 988
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 204/551 (37%), Positives = 296/551 (53%), Gaps = 30/551 (5%)
Query: 244 LRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASGKDSSVPEPVWDDEE 303
L +S D + R S + D P + G D S + S +P D +E
Sbjct: 162 LLRSLDDVERPDDSTGKGKDAVPSIS---------GKGPDGSAKPRQPQSSAKPNQDKDE 212
Query: 304 TRAFYECLPDLRAF------VPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQ-LAAQ 356
E L DL + +P LL + + VK LE+ T P +G A+
Sbjct: 213 EPFPLEVLKDLLGYDKEHVNLPLALLFARTYSWDILGVKALEEDT-----PKEGHGTASG 267
Query: 357 DTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKG--KGKDKEEKDKEKAKDPDK 414
D A + P S EK + +K+K D K K +G++ E A D
Sbjct: 268 DEAPANTSQVDDPPLVS-EKLQTHGKKKKTDGDDQSKSKADNEGQNGIASGPEGASKTDS 326
Query: 415 EKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRK 474
+ E + K V G +DALL +LP ++D +DQL ++FC+LNSK++R
Sbjct: 327 QPADSNSREPEEPATTIANKSV-GAQVDALLSKLPELANKDAVDQLALDFCFLNSKASRN 385
Query: 475 RLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNI-E 533
RLV+A+ VP+ +LLP Y+R+VATL + DV LI L++EF L +K + + +
Sbjct: 386 RLVKAVQEVPKGRSDLLPLYARLVATLGQYLPDVPQGLIAYLDDEFRSLQRRKQKEFLGQ 445
Query: 534 TKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETS 593
+ NIR++ EL KF + P ++F C K LD+F+ NI++ NLLE CGR+L R+PET+
Sbjct: 446 VRTSNIRYLAELTKFGVVPEHVIFHCFKVSLDEFSRMNIEIIGNLLENCGRYLLRNPETA 505
Query: 594 IRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFS 653
RMA+ LE L R K+ ++L + ++ENA Y PP R A K R P+ YIRKL++
Sbjct: 506 PRMASFLETLGRKKSAQHLGQQERMIIENAMYYVDPPPRPAIQQKERTPMELYIRKLVYL 565
Query: 654 DLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEF 711
D++K + VL+ +RKL W + E L F K K KYG IHL+A + + L RYH F
Sbjct: 566 DMNKRNYTKVLKSIRKLHWEEPEVVRILEGIFSKPGKIKYGNIHLLAIIISALYRYHQPF 625
Query: 712 AVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
++V+D VLE I +GLE ND+ Q R++ +++LGELYNY+ VDS VIFDTLY I+ +GH
Sbjct: 626 VISVIDNVLERITIGLENNDFKFNQSRISEVKYLGELYNYKMVDSPVIFDTLYRIVTYGH 685
Query: 772 GTAETYWTHQK 782
G Y+ H K
Sbjct: 686 GF--KYYLHTK 694
>gi|302882367|ref|XP_003040094.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256720961|gb|EEU34381.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 1125
Score = 323 bits (828), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 154/338 (45%), Positives = 223/338 (65%), Gaps = 3/338 (0%)
Query: 438 GTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRM 497
G +DALL RLP ++D++DQ ++FC+LNSK++R RLV+AL VP+ +LLP +SR+
Sbjct: 461 GAQVDALLARLPELTNKDVVDQTAIDFCFLNSKASRNRLVKALTEVPKGRSDLLPSWSRL 520
Query: 498 VATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNI-ETKIRNIRFIGELCKFKIAPAGLV 556
VATL M DV L+ L+ EF L +K++ + + ++ NIR++ EL KF I P +V
Sbjct: 521 VATLGRYMPDVPKGLVDYLDAEFRSLQRRKEKDFLGQVRLSNIRYLAELTKFGIVPEHVV 580
Query: 557 FSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRH 616
F CLK LDDF+ NI++ CNL+E CGR+L R+PET+ RM + LE L R K+V+++
Sbjct: 581 FHCLKVSLDDFSRMNIEILCNLIENCGRYLLRNPETAPRMVSFLETLQRKKSVQHIGQPE 640
Query: 617 VTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE 676
L++NA Y PPER A K R P+ ++RKL++ D+ K + +L+Q+R+L W + E
Sbjct: 641 RMLIDNAVYYVDPPERPAIEQKERTPMELFVRKLIYVDMTKRNYSKILKQIRRLHWEETE 700
Query: 677 --SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGM 734
+ L K F K K KYG +HL+ L + L RYH F V V+D V+E + GLE NDY
Sbjct: 701 VVAILEKVFSKPGKVKYGSVHLLGILLSALYRYHPAFVVKVIDNVIESVTFGLEQNDYRF 760
Query: 735 QQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHG 772
QRR+A +++LGELYNY ++ VIFDT+Y I+ FG+G
Sbjct: 761 YQRRIAEVKYLGELYNYRMLEHPVIFDTMYKIMTFGYG 798
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 119/279 (42%), Gaps = 51/279 (18%)
Query: 105 KKRSTLKLLLELYFIGII---EDSSIFINIIK-------------------DLTSIEHLK 142
++R+ L+++ EL+ +G++ +D S + K D +E LK
Sbjct: 146 RQRALLRVVTELWLVGVVRTLDDVSRPDDATKGAAGKVAELKTRTNKGAGADPFPLEVLK 205
Query: 143 D---RDTTQTNLTLLASFARQ-GRIFLGLPLSGP-GQEIYEEFFK--------------G 183
D D NL LL F + G LG+ SG G++ EE G
Sbjct: 206 DLLGYDREHANLPLLVIFVKSFGWDILGVKPSGADGRKTVEEDGTTEGNEDTNDEKDEGG 265
Query: 184 LNITADQ-------KKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEE 236
++ +DQ ++ F+ Y++ V+ + + S++ NA+ GE+ E+
Sbjct: 266 MSSDSDQPFTEPEMRERFRSVLKKYFDDVKGHITRDQKSIQSQARRNAEAYVKSGEVFED 325
Query: 237 NSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASG---KDSS 293
++YEK K+ + L N +A+A+ P + + + +G +G +
Sbjct: 326 RQANYEKQVKAQERLVSNAQVIADAIGADMPDLKDSDDSLGAFNGSIGLVKTGDYLRSMG 385
Query: 294 VPEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANE 332
+W+DE+ R FYE L DL+ VP +LL + + K +
Sbjct: 386 DGAGIWEDEDERRFYENLVDLKGKVPPILLEDGKKKKTD 424
>gi|194763661|ref|XP_001963951.1| GF20988 [Drosophila ananassae]
gi|190618876|gb|EDV34400.1| GF20988 [Drosophila ananassae]
Length = 1258
Score = 323 bits (827), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 237/733 (32%), Positives = 363/733 (49%), Gaps = 57/733 (7%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKK-------RSTLKLL 113
+ + S LH Y DF ++ K N+KA +K R L+L
Sbjct: 180 VTLASRLHCTYADFDVQFLEAWQKAL-------------NIKATEKINNPSKLRVDLRLF 226
Query: 114 LELYFIGIIEDSSIFINIIKDLTSIEHLKDRDTT-QTNLTLLASFARQ-GRIFLGLPLSG 171
EL G+I+ + L HL +D +N +++ SF R G + GL +
Sbjct: 227 AELVSSGVIQMKPGLAQLGVVLV---HLIAQDKEDHSNFSIILSFCRHCGEEYAGL-VPQ 282
Query: 172 PGQEIYE----EFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKIL 227
Q++ E K +TAD++ + Y+ A+ + + AE L M + +
Sbjct: 283 KVQQLANKYGVEVPKSEFLTADKQLNLRNMLKGYFKALCKHVLAEQAELMNMTKNIRRTM 342
Query: 228 NAKGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDA--- 284
KGE+S E E ++ S+D L + SL+E L P + ++ + D
Sbjct: 343 ECKGEISTEKREKCEVMQASFDKLLASAQSLSELLGEPLPELAKESECCNPGTVIDNMLD 402
Query: 285 SPASGKDSSVPEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDP 344
S A G V +P W DEETR+FY LPDLR F+P + P V LEQ +P
Sbjct: 403 SAAFG----VLDP-WGDEETRSFYTDLPDLRQFLPNF---------SAPKVD-LEQMEEP 447
Query: 345 ASEPDQGQLAAQDTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEK 404
SE + + A AE+ D S S + +E A G
Sbjct: 448 -SELTEEAIEANLDAEMDIDDPPSTASDSADNPPSEESPAAGAAGAAGAGTAAGATPTTP 506
Query: 405 DKEKAKDPDKEKGKEKDTERKVETEKEKLKGVEGTNL----DALLQRLPGCVSRDLIDQL 460
E+ K P K + R+ + + + + T L D L L CV+++LID
Sbjct: 507 VSEEVK-PQKMGTALMELGRQQQNQNGQTQNQNQTQLRQQFDTFLVNLFNCVNKELIDSA 565
Query: 461 TVEFCY-LNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEE 519
+EF N+K RK+L R +F+V RT L++LPY SR VA + C DV++ L ++L +E
Sbjct: 566 AIEFLLNFNTKHQRKKLTRTIFSVQRTRLDILPYLSRFVAIVHMCNTDVAADLSELLRKE 625
Query: 520 FNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLL 579
F + I KK+Q+NIE+K++ +RFIGEL KF + CLK L DF HH I++AC +
Sbjct: 626 FKWHIRKKNQLNIESKLKIVRFIGELVKFGLFKKFDALGCLKMLLRDFQHHQIEMACAFV 685
Query: 580 ETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKV 639
E G +LY + + M L+ ++RLK +D RH +E+ YYL KPPE S + +
Sbjct: 686 EVSGVYLYNCRDARLLMNVFLDQMLRLKTATAMDSRHAAQIESVYYLVKPPESSKKEAAP 745
Query: 640 RPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCES--YLLKCFMKVHKGKYGQIHLI 697
RPP+H+YIR L+F +L K ++E ++ LR++ W D ++ Y +KC K + ++ + +
Sbjct: 746 RPPMHEYIRHLIFEELCKQNVERCIKMLRRINWQDPDTSGYAIKCLSKAYLLRFPLVRCL 805
Query: 698 ASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSS 757
A L +GLS Y V+D V E+IR GLE++ M QRR+A ++LGE+YNY+ V+S+
Sbjct: 806 ADLVSGLSSYQPRAVTIVIDNVFEDIRAGLEIHSPRMAQRRIAMAKYLGEMYNYKLVEST 865
Query: 758 VIFDTLYLILVFG 770
I +TLY I+ G
Sbjct: 866 HILNTLYSIISLG 878
>gi|71018931|ref|XP_759696.1| hypothetical protein UM03549.1 [Ustilago maydis 521]
gi|46099248|gb|EAK84481.1| hypothetical protein UM03549.1 [Ustilago maydis 521]
Length = 1235
Score = 323 bits (827), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 228/756 (30%), Positives = 348/756 (46%), Gaps = 101/756 (13%)
Query: 62 KICSLLHQRY--KDFSPCLIDGL-------LKVFFPGKSGEDLDADRNLKAMKKRSTLKL 112
+I S H R+ K FS L + L K + + E + D + ++R L+
Sbjct: 134 EILSAFHVRFGGKAFSSPLTNALELSLAPPSKTLYQDATAEQKERDEAARVARQRHLLRA 193
Query: 113 LLELYFIGIIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGLPL-- 169
+ EL + + SS ++HL D +N LL + + G+ FL PL
Sbjct: 194 VGELALVKAVGHSSESTGAPWLFDVLKHLLATDREHSNAPLLIAILKGLGQSFLA-PLDT 252
Query: 170 ----SGPGQEIYEEFFKGLNITADQ----------------KKIFKKAFHTYYNAVQELL 209
SG + G + DQ + F++ TY+ + +
Sbjct: 253 QDAASGLSDTLNSTLTLGDAVNVDQIQAIDPSSAPLVSPAWQTKFRELIETYFRTLVNRI 312
Query: 210 QAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDM-QPPV 268
EH L+ + N + G++ E+ YE++ KS++ + L+E L + P +
Sbjct: 313 VKEHRRLQDHDRRNHEAYIRSGQIFEDRQQRYERMTKSFERIREWGCILSELLGVPMPKL 372
Query: 269 MPEDVHTTRVTSGEDASPASGKDSSVPEPV-----WDDEETRAFYECLPDLRAFVPAVLL 323
+ + V G + S D + E V W+D++++ FY+ + DL +P
Sbjct: 373 DSSEASSNSVGLGVNLDSKSAFDRADEEFVTDQSPWEDQDSQKFYQDIMDLGDVIP---- 428
Query: 324 GEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTAEVSADLGASPEGKSVEKGKDKEEK 383
PS+ L Q T ++ + + A D E + D A+ +
Sbjct: 429 ---------PSI--LAQTTGIGTQAENNGVKADDAKEAAVDTDAA--------------E 463
Query: 384 EKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEKDTERKVETEKEKLKGVEGTNLDA 443
+ P + G EKG LK L
Sbjct: 464 SITASSSPQIDAGPS----------------EKG---------------LKAGPAAQLAT 492
Query: 444 LLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLST 503
L+ RL +R +ID V+F ++ +K R +LVR L ++P ++L PYY+R+ A LS
Sbjct: 493 LMARLSKMTNRSMIDSAAVDFSFIATKPARHKLVRHLASLPHNRIDLAPYYARLAAVLSR 552
Query: 504 CMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKAC 563
M DV L +E EF L KK+ E +IRN RFI EL KFK+ +F C+K C
Sbjct: 553 YMPDVGEDLTAAVEHEFRNLQRKKNADLTENRIRNARFISELTKFKLTSVHAIFHCIKTC 612
Query: 564 LDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENA 623
LDDF+ NI+V +LLE CGR+L R+ ETS M MLE+L R + NLD R + L+ NA
Sbjct: 613 LDDFSGSNIEVLASLLEGCGRYLLRTEETSADMRRMLELLRRKRAAANLDQRQLLLLNNA 672
Query: 624 YYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDC--ESYLLK 681
YY C PPER A K+R P+ YIR L++ L K +I+ VL QLRKLPW D +L
Sbjct: 673 YYQCNPPERKAIEPKLRQPIELYIRHLVYHVLQKKTIDAVLVQLRKLPWDDAAVHGWLKD 732
Query: 682 CFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAH 741
F + + ++ IHL+A L L +H F+V V+D+VLE IR G+E N + QRR+A
Sbjct: 733 AFTRAWRIRFSNIHLLAILVYELDCFHPAFSVEVIDQVLENIRTGMEENIFKHNQRRVAT 792
Query: 742 MRFLGELYNYEHVDSSVIFDTLYLILVFGHGTAETY 777
+LGELYNY ++ +V+F+ L+ + FGH +
Sbjct: 793 TCYLGELYNYRLINGAVVFEQLWSLATFGHPNGRPW 828
>gi|402084002|gb|EJT79020.1| nonsense-mediated mRNA decay factor [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 1122
Score = 322 bits (826), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 165/392 (42%), Positives = 242/392 (61%), Gaps = 11/392 (2%)
Query: 384 EKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEKDTERKVETEKEKLKGVEGTNLDA 443
E K K PD E+ GK D + +P K D + K G +DA
Sbjct: 414 EDVKKKKPDAEEQVGK---RADAGEPAEPPKPTADPVDDQSAAIANK-----TTGAQVDA 465
Query: 444 LLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLST 503
+L RLP +++ +DQ ++FC+LNSK++R RLV+AL +VP+ +LLP ++R+VATL
Sbjct: 466 ILLRLPDLTTKEGVDQTAIDFCFLNSKASRNRLVKALTDVPKGRSDLLPCWARLVATLGQ 525
Query: 504 CMKDVSSMLIQMLEEEFNFLINKKDQMNI-ETKIRNIRFIGELCKFKIAPAGLVFSCLKA 562
M D+ +++ L+ EF L +KD+ + + ++ NIR++ EL +F I P +VF CLK
Sbjct: 526 HMPDIPKGVVEYLDTEFRSLQRRKDKDFLSQVRLSNIRYLAELTRFNIVPEHVVFHCLKV 585
Query: 563 CLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVEN 622
LDDF+ NI+V C+LLE CGR+L R+PETS RM++ LE L R K+V+++ L+EN
Sbjct: 586 GLDDFSKMNIEVICSLLENCGRYLLRNPETSPRMSSFLETLQRKKSVQHIGQAERMLIEN 645
Query: 623 AYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE--SYLL 680
A Y PPER + K R P+ ++RKL++ DL K + VL+Q+R+L W + E S L+
Sbjct: 646 AIYYVNPPERPSIEQKERTPMELFVRKLVYVDLSKRNYSKVLKQIRRLHWEEAEVVSILM 705
Query: 681 KCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLA 740
K F K + KYG I+L+A L + +YH +FAV +D ++E I GLE N++ QRR+A
Sbjct: 706 KVFSKPGRVKYGNIYLLAILLGAICKYHVDFAVTAIDNIIESIIFGLEQNEFRYNQRRIA 765
Query: 741 HMRFLGELYNYEHVDSSVIFDTLYLILVFGHG 772
++LGELYNY D V+FDT+Y IL FGHG
Sbjct: 766 EAKYLGELYNYRLFDHPVVFDTMYKILTFGHG 797
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 154/378 (40%), Gaps = 76/378 (20%)
Query: 61 LKICSLLHQRY--KDFSPCLIDGLLKVFFPGK-------SGEDLDADRNLKAMKKRSTLK 111
++I S LHQR+ +F+ L L + P + E+ + D + +++R ++
Sbjct: 93 VEIVSALHQRFGPDEFTQPLASHLAQAMAPPDKTKLKTMTAENREKDERERLVRQRVLIR 152
Query: 112 LLLELYFIGII---EDSSIFINIIKDLTS-------------------------IEHLKD 143
++ EL+ +G++ ED++ + + T +E LKD
Sbjct: 153 VVTELWLVGVLRTLEDAAHPHDGLPKPTPAGKPQDSKSRGAPGGAKPATPEPFPLEVLKD 212
Query: 144 ---RDTTQTNLTLLASFARQ-GRIFLGL-PLSGPGQEIYEE--FFKGLNITADQ------ 190
D NL LL +F + LG+ S G++ EE K +DQ
Sbjct: 213 LLGHDREHVNLPLLVAFVKAFSWDILGIKAASADGRKAVEEDGATKLSGGGSDQDDDPPL 272
Query: 191 -----KKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLR 245
++ FK Y+ V+ L+ + ++ NA+ GE+ E+ ++++K
Sbjct: 273 TPPELQERFKNVLKRYFEDVKSHLERDQRAIFSQSRRNAEAYVKSGEVFEDRQANFDKQV 332
Query: 246 KSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASG---KDSSVPEPVWDDE 302
K+ + L N LA+ + + P + E + +G +G + +W+DE
Sbjct: 333 KAQERLAANAQVLADVIGAEMPDLKETGDSLASANGSIGLVKTGEYLRGQGEGAGIWEDE 392
Query: 303 ETRAFYECLPDLRAFVPAVLLGEAEHK-------------ANEPSVKPLEQPTDPASEPD 349
E R FYE L DL+ VPA+LL + + K A EP+ +P P ++P
Sbjct: 393 EERRFYENLVDLKGKVPAILLEDVKKKKPDAEEQVGKRADAGEPA-----EPPKPTADPV 447
Query: 350 QGQLAAQDTAEVSADLGA 367
Q AA A + A
Sbjct: 448 DDQSAAIANKTTGAQVDA 465
>gi|307168300|gb|EFN61506.1| Regulator of nonsense transcripts 2 [Camponotus floridanus]
Length = 1156
Score = 322 bits (826), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 159/334 (47%), Positives = 224/334 (67%), Gaps = 4/334 (1%)
Query: 441 LDALLQRLPGCVSRDLIDQLTVEFCY-LNSKSNRKRLVRALFNVPRTSLELLPYYSRMVA 499
LDA L LP CV+R++ID V F LN+K N+K+LV+ALF V R +LLP+YSR+ A
Sbjct: 438 LDAFLTHLPNCVNREMIDNAAVNFLMNLNTKHNKKKLVKALFGVSRIRQDLLPFYSRLAA 497
Query: 500 TLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSC 559
L M ++ + L QML+++F + ++KKDQ+NIE+KI+ +R+IGEL KFK+ C
Sbjct: 498 ILHPVMPEIGNDLCQMLKQDFKYHVHKKDQINIESKIKVVRYIGELVKFKLYSKIEALYC 557
Query: 560 LKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTL 619
LK L DFTHH+I++ CNLLE CGR+L+ SP++ R LE +MR K V LD R+VT+
Sbjct: 558 LKVLLHDFTHHHIEMVCNLLEICGRYLFCSPDSHQRTKVYLEQMMRKKAVTALDSRYVTI 617
Query: 620 VENAYYLCKPPERSARVSKV-RPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSD--CE 676
+ENAYY PPE + V+K RPP+H++IRKLL+ DL K++ + VL+ +RK+ W D
Sbjct: 618 IENAYYFVNPPESTGGVTKKDRPPVHEFIRKLLYQDLSKTNTDKVLKWMRKIDWEDETVS 677
Query: 677 SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQ 736
+Y +KC + KY I + SL AGL +++ VVD VLE+IRL +E+N Q
Sbjct: 678 TYAIKCLTAAYNVKYPNIRCVGSLLAGLVAHYETIGPQVVDGVLEDIRLCMEINLPKYNQ 737
Query: 737 RRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
RR+A +++LGELYNY V+S IF TLYL++ G
Sbjct: 738 RRIAMVKYLGELYNYRMVESGDIFRTLYLLITLG 771
Score = 102 bits (255), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 139/294 (47%), Gaps = 26/294 (8%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRST-LKLLLELYFI 119
+++CS LHQ Y +FS + ++ +LK K S KL ++L F
Sbjct: 124 IRVCSFLHQTYAEFSTHFFENWQRIL-------------SLKINDKISNPSKLRVDLRFY 170
Query: 120 GIIEDSSIF-----INIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGLPLSGPG 173
+ ++ IF ++++ + ++ D++ N +++ SF R G + GL +
Sbjct: 171 AELVNAGIFTHKQGLSLLGSVLTVLINMDKEE-HNNASIILSFCRHCGEDYAGL-VPKKV 228
Query: 174 QEIYEEFF----KGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNA 229
+E+ E+ K ++ D+++ K YYN++ + L EH L+ E +N KIL
Sbjct: 229 RELSEKLNVPIPKSKLLSPDKQQNVKLLLRDYYNSLCKHLLKEHKELQAFEKQNRKILQT 288
Query: 230 KGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASG 289
+GELS E E L+ SY+ L +V S ++ LD +P D T G
Sbjct: 289 RGELSLERKEKLEALQVSYERLLTSVQSFSDTLDEPMLELPVDNEMKAETEETLKMINEG 348
Query: 290 KDSSVPEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTD 343
+DS++ E +W DEETR FYE PDL F+P L E +A++ V E D
Sbjct: 349 EDSTILEDMWGDEETRRFYEVFPDLTVFLPGSYLKETPKEASKTDVSITEDALD 402
>gi|400596367|gb|EJP64141.1| MIF4G domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 1160
Score = 322 bits (824), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 164/382 (42%), Positives = 239/382 (62%), Gaps = 9/382 (2%)
Query: 402 EEKDKEKAKDPDKEKGKEKDTERKVETEKEKLKGVE------GTNLDALLQRLPGCVSRD 455
E+ K+K D+ K D E V + + + + G +DALL RLP ++
Sbjct: 437 EDGKKKKTDGEDQVGRKTDDAEATVAADPAEDQSMAIANKTIGAQVDALLARLPDLTGKE 496
Query: 456 LIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQM 515
IDQ+ ++FCYLNSK++R RLV+AL VP+ +LLP +SR+VATL M DV L++
Sbjct: 497 TIDQMAIDFCYLNSKASRNRLVKALTEVPKGRGDLLPSWSRLVATLGRYMPDVPKGLVEY 556
Query: 516 LEEEFNFLINKKDQMNI-ETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDV 574
L+ EF L +K++ + + ++ NIR++ EL KF + P +VF CLK LDDF+ NI++
Sbjct: 557 LDAEFRSLQRRKEKDFLGQVRLGNIRYLAELTKFGVVPEHVVFHCLKVSLDDFSRMNIEI 616
Query: 575 ACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSA 634
CNLLE CGR+L ++P+T+ RM + LE L R K+V+++ L++NA Y PPER A
Sbjct: 617 LCNLLENCGRYLLKTPDTAPRMVSFLETLQRKKSVQHIGQPERMLIDNAVYYVDPPERPA 676
Query: 635 RVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPW--SDCESYLLKCFMKVHKGKYG 692
K R P+ +IRKL+++D+ K + +L+Q+R+L W SD + L K F K K KYG
Sbjct: 677 IEQKERTPMELFIRKLVYNDMTKRNYSKILKQIRRLHWEESDVVAMLEKVFSKPGKVKYG 736
Query: 693 QIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYE 752
+HL+A L + L RYH F V V+D V+E I GLE ND+ QRR+A +++L ELYNY
Sbjct: 737 NVHLLAILLSALYRYHPAFVVKVIDNVIESITFGLEQNDFRTFQRRVAEVKYLSELYNYR 796
Query: 753 HVDSSVIFDTLYLILVFGHGTA 774
++ VIFD +Y IL FG+G A
Sbjct: 797 MLEHPVIFDAMYKILTFGYGGA 818
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 69/145 (47%), Gaps = 15/145 (10%)
Query: 194 FKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYR 253
FKK Y++ V+ + + S+ NA+ GE+ E+ ++YEK K+ D L
Sbjct: 304 FKKILIKYFDDVKNHIVRDQKSIHSQARRNAEAYVKSGEVFEDRQANYEKQVKTQDRLVS 363
Query: 254 NVSSLAEAL--------DMQPPVMPEDVHTTRVTSGED-ASPASGKDSSVPEPVWDDEET 304
N +A+A+ D P+ V +GE SPA G +WDD+E
Sbjct: 364 NAQVIADAIGAEMPDLKDSYDPLNASGAGIGLVKTGEYLRSPADGLG------IWDDDEE 417
Query: 305 RAFYECLPDLRAFVPAVLLGEAEHK 329
R FYE L DL+ VP++LL + + K
Sbjct: 418 RRFYENLVDLKGKVPSMLLEDGKKK 442
>gi|410963207|ref|XP_003988157.1| PREDICTED: regulator of nonsense transcripts 2 [Felis catus]
Length = 1198
Score = 322 bits (824), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 238/716 (33%), Positives = 357/716 (49%), Gaps = 117/716 (16%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
+ +CSL HQRY DF+P L+ K F E ++ K R+ L+ + EL +G
Sbjct: 222 VHLCSLFHQRYADFAPSLLQVWKKHF------EARKEEKTPNITKLRTDLRFIAELTIVG 275
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGL---PLSGPGQEI 176
I D I + L +I + DR++ T+++++ SF R G GL + ++
Sbjct: 276 IFTDKEGLSLIYEQLKNIIN-ADRES-HTHVSVVISFCRHCGDDIAGLVPRKVKSAAEKF 333
Query: 177 YEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEE 236
F I+ ++++ F+ Y+ ++ + L+ +H L+ E +N +IL++KGELSE+
Sbjct: 334 NLSFPPSEIISPEKQQPFQNLLKEYFTSLTKHLKRDHRELQNTERQNRRILHSKGELSED 393
Query: 237 NSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTS-GEDA-SPASGKDSSV 294
YE+ SY L N SLA+ LD P +P+D T G D +P + +
Sbjct: 394 RHKQYEEFAMSYQKLLANSQSLADLLDENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDL 453
Query: 295 PEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLA 354
+W+DE+ R FYE L DL+AFVPA+L K NE S + + D + E +
Sbjct: 454 EGGIWEDEDARNFYENLIDLKAFVPAILF-----KDNEKSCQNKDSNKDDSKEAKE---- 504
Query: 355 AQDTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDK 414
+D EVS E +++E D E E G D +A+D K
Sbjct: 505 PKDNKEVSNPEDLELELENLEINDDTLELE-------------GGD-------EAEDLTK 544
Query: 415 EKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRK 474
+ E++ E + + LK + +DA LQ+LP CV+RDLID+ +L +
Sbjct: 545 KLLDEQEQEDEEASTGSHLKLI----VDAFLQQLPNCVNRDLIDKPH----FLPVPNETL 596
Query: 475 RLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIET 534
R L+ L+LLP+Y+R+VATL CM DV+ L ML +F F + KKDQ+NIET
Sbjct: 597 RDPGPLW------LDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINIET 650
Query: 535 KIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSI 594
K + +RFIGEL KFK+ CLK L DF+HH+I++AC LLETCGRFL+RSPE+ +
Sbjct: 651 KNKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESHL 710
Query: 595 RMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSD 654
R + +L+ L+ +RKL + D
Sbjct: 711 RTS----VLLVLRQ--------------------------------------MRKLPWQD 728
Query: 655 LDKSSIEHVLRQLRKLPWSDCESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVA 714
+ + Y++ C + + KY IH +A+L AGL Y ++ +
Sbjct: 729 ------------------QEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDVGIH 770
Query: 715 VVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
VVD VLE+IRLG+E+N QRR++ +FLGELYNY V+S+VIF TLY FG
Sbjct: 771 VVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFG 826
>gi|392572889|gb|EIW66032.1| hypothetical protein TREMEDRAFT_35522 [Tremella mesenterica DSM
1558]
Length = 1155
Score = 321 bits (823), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 224/729 (30%), Positives = 366/729 (50%), Gaps = 89/729 (12%)
Query: 105 KKRSTLKLLLELYFIG-----IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFAR 159
++R L+++ EL +G + + +S I+K + D +N+ LL+ F +
Sbjct: 147 RQRLVLRIVAELAMVGGWVDGVSKGASEVTKILKAFMT------GDPQFSNMPLLSYFLK 200
Query: 160 Q-GRIFLGLPLSGPGQEIYEEFFKGLN---ITADQKKIFKKAFHTYYNAVQELLQAEHTS 215
+LG S + ++ G + A+ +K + F TY+N + L
Sbjct: 201 HLAGAYLGPDPSTEKTGLIDDDLPGNVEDLVPAESQKNIRDLFQTYFNNASKTLVKGQLK 260
Query: 216 LRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHT 275
L + + N + GE+ E+ +YE++ K+ + L V ++A+ L + PP +P T
Sbjct: 261 LLEQDKRNHEAYIRSGEIFEDRQHAYERMAKAVERLTTGVQAMADLLGLAPPTLPT---T 317
Query: 276 TRVTSG-----EDASPASGKDSSVPEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKA 330
+ G E S +D +WDD+E + FYE L DL+ VP+ LLG E
Sbjct: 318 ASLNKGGLQIVEGQSSFVVRDDGEGGGIWDDDEEQRFYEDLLDLKQTVPSALLGIKERMK 377
Query: 331 NEPSVKPLEQPTDPASEPDQGQLAAQDTAEVSADLGASPEGKSVEKGKDKEEKE------ 384
+ L QDT V + A E K +EE+E
Sbjct: 378 GTKA----------------DALKGQDTVMVEKEDDAV----RAEAQKKREEEEIQRLLE 417
Query: 385 --KEKAKDPDKEKGKGKDKEE------KDKEKAKDP------DKEKGKEKDTERKVETEK 430
++ D E+ +GKD E + A DP + + E T ++ K
Sbjct: 418 QVEQSESTMDNEEPQGKDSSEINGLPSAQSQLAIDPLDDPLEETYESAEPLTASSLKESK 477
Query: 431 EKLKGVEG---TNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTS 487
+ G++ L+A+ LP +R+++D+L V+F +LNSK+ RKRLV + VP+T
Sbjct: 478 DMDDGLQPGPHARLNAIFAALPQASNREMVDKLAVDFAFLNSKAARKRLVAFIGAVPKTR 537
Query: 488 LELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIET-KIRNIRFIGELC 546
+LLP+YSR++ATL+ M D+ + ++++LEEE +L K+ +++ +++N+RF GEL
Sbjct: 538 TDLLPHYSRLIATLNPYMPDIGTGVLEILEEETRYLQRKRLIRELDSVRLKNVRFWGELA 597
Query: 547 KFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANML------ 600
KFK+A + LK LDDF NI+ NLLETCGRFL R T+ +M+
Sbjct: 598 KFKVAKPYAILHVLKVFLDDF-RANIENISNLLETCGRFLLRYEGTAATAKSMVGPFYHR 656
Query: 601 -------------EILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYI 647
E++ R + +LD RH+ ++ENA+Y+C PPER R P+ +I
Sbjct: 657 ISTCCKVTDVSQVELMRRKQANSHLDQRHLIMLENAFYMCNPPERVVRQIIELTPMQSFI 716
Query: 648 RKLLFSDLDKSSIEHVLRQLRKLPWSDCESY--LLKCFMKVHKGKYGQIHLIASLTAGLS 705
+ LL L K +++ V++ RKL W + E+Y +L F + + KY I AS+ L
Sbjct: 717 QYLLHDVLMKRTVDKVVKLFRKLHWEEQETYDYILMTFTHIWEIKYENIEYAASVVCDLQ 776
Query: 706 RYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYL 765
+YH EF++AVVD+VLE+IR+G+E N + QRR+A +++LGELY Y + + +I DTL+
Sbjct: 777 KYHPEFSIAVVDQVLEDIRVGMEENIFKYNQRRIASVKYLGELYMYRVIGAQIILDTLWT 836
Query: 766 ILVFGHGTA 774
++ FGH A
Sbjct: 837 LISFGHQEA 845
>gi|345560876|gb|EGX43993.1| hypothetical protein AOL_s00210g154 [Arthrobotrys oligospora ATCC
24927]
Length = 1404
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 158/343 (46%), Positives = 224/343 (65%), Gaps = 5/343 (1%)
Query: 438 GTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRM 497
G +DALL RLP +R+LID +FC+LNSK++R RL++ L ++PR +LLPYYSR+
Sbjct: 477 GAQVDALLIRLPELTNRELIDNFAYDFCFLNSKASRNRLIKVLEDIPRGRSDLLPYYSRL 536
Query: 498 VATLSTC-MKDVSSMLIQMLEEEFNFLINKKDQMNIET-KIRNIRFIGELCKFKIAPAGL 555
+A+LS + DVSS ++ L++EF L +K++ + + +N ++ E+ KF + P +
Sbjct: 537 IASLSKAGLTDVSSAMVVYLDKEFRSLQKRKEKEQLTAIRTQNAKYFSEMTKFGLVPEHV 596
Query: 556 VFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPR 615
+F C K L+DF+ NID+ C LLE CGR+L R+P T RM LE L R K+ +L P+
Sbjct: 597 IFHCFKVALEDFSKMNIDIICILLEGCGRYLLRNPATQPRMITFLETLQRKKDAHHLSPQ 656
Query: 616 HVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDC 675
+ENA+Y PPER + V+K R P Y+RKL++ DL+K + ++ LRKL W D
Sbjct: 657 DRIAIENAFYYVNPPERPSIVAKERSPYELYVRKLIYLDLNKKNFNRTIKSLRKLHWEDP 716
Query: 676 E--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYG 733
+ L K K+ K +Y + LIA + GL RYH +F + VVD VLE IR+GLE NDY
Sbjct: 717 SIVNMLAKVCTKIWKVRYSNVSLIAIVVFGLFRYHQDFGIRVVDGVLENIRIGLEENDYR 776
Query: 734 MQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH-GTAE 775
M QRR+A +R+LG+LYNY +DS VIFDTLYLIL FG+ GT +
Sbjct: 777 MNQRRIASIRYLGDLYNYSMIDSPVIFDTLYLILSFGYAGTPQ 819
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 68/136 (50%), Gaps = 3/136 (2%)
Query: 194 FKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYR 253
F+ TY++ V + + EH L+Q N++ GE+ E+ ++EK K+++ L
Sbjct: 291 FRNVLSTYFSGVSKYIHGEHRRLQQQAKRNSEAYVRSGEVFEDRQQAFEKATKAHEKLVA 350
Query: 254 NVSSLAEALDMQPPVMPEDVHTTRVTSG---EDASPASGKDSSVPEPVWDDEETRAFYEC 310
+ ++E L ++ P + +D G E S + + +W+D++ R YE
Sbjct: 351 SAQVVSEILGLEMPDLSDDDEAKESGEGMIRESGSMFKKGEEASGNGMWEDDDQRRLYED 410
Query: 311 LPDLRAFVPAVLLGEA 326
L DLRA VP++LL E
Sbjct: 411 LIDLRARVPSILLDEG 426
>gi|255931823|ref|XP_002557468.1| Pc12g06250 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582087|emb|CAP80252.1| Pc12g06250 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1186
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 149/337 (44%), Positives = 226/337 (67%), Gaps = 3/337 (0%)
Query: 438 GTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRM 497
G +D+LL +LP ++D +DQ ++FC++NSK++R RLV+A+ ++P+ ++LLP YSR+
Sbjct: 477 GAQVDSLLAKLPELQTKDQVDQFALDFCWVNSKASRNRLVKAVSDIPKGRIDLLPLYSRL 536
Query: 498 VATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNI-ETKIRNIRFIGELCKFKIAPAGLV 556
VATL + D+ L L+EEF L +K + + + ++ N+R++ EL KF + P ++
Sbjct: 537 VATLGQYLPDIPQGLTTYLDEEFRSLQRRKSKEFLGQVRMSNVRYLAELTKFGVVPEHII 596
Query: 557 FSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRH 616
F C K LD+F+ NI++ +LLE CGR+L R+PE+S RMA+ LE L R K V++L +
Sbjct: 597 FHCFKVSLDEFSRMNIEIIGHLLENCGRYLLRNPESSPRMASFLETLSRKKTVQHLAQQE 656
Query: 617 VTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE 676
++ENA Y PP R A K R P+ QYIR+L++ D++K + +L+ +RKL W + E
Sbjct: 657 RMVIENAIYYVDPPPRPAIQQKERTPMEQYIRRLIYLDMNKRNYTKILKSIRKLHWEEPE 716
Query: 677 --SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGM 734
L + F K K KYG IHL+A L + L RYH +F + +VD VLE++ LGLE ND+
Sbjct: 717 VVEILERVFSKPVKVKYGSIHLLAILVSALYRYHQDFVIGIVDNVLEQVTLGLEQNDFKF 776
Query: 735 QQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
Q+R+A +++LGELYNY+ +DS VIFDTLY I+ FGH
Sbjct: 777 NQKRIAEIKYLGELYNYKMIDSPVIFDTLYRIITFGH 813
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 79/191 (41%), Gaps = 24/191 (12%)
Query: 194 FKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYR 253
F+ + Y V+ + + +L Q NA+ GE+ E+ +++EK K + L
Sbjct: 295 FRNILNRYLEDVKAHVVRDQRALAQQNRRNAEAYVKSGEIFEDRQANFEKQSKVLEKLVA 354
Query: 254 NVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASG----------KDSSVPEPVWDDEE 303
N L EAL P + E T DAS G + +W+DEE
Sbjct: 355 NTQVLCEALGTDMPDLAEKEPT-------DASAGGGIGLVKTTDYLRGQGEGAGIWEDEE 407
Query: 304 TRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQP-------TDPASEPDQGQLAAQ 356
R FYE L DL+ VPAVLL + + K E +P +P+ E + Q
Sbjct: 408 ERRFYENLVDLKGKVPAVLLEDGKKKKGEGEESGKRKPDGESADSAEPSDEKAAAEADDQ 467
Query: 357 DTAEVSADLGA 367
TA S +GA
Sbjct: 468 STAIASKTVGA 478
>gi|358382578|gb|EHK20249.1| hypothetical protein TRIVIDRAFT_77520 [Trichoderma virens Gv29-8]
Length = 1119
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 162/380 (42%), Positives = 242/380 (63%), Gaps = 9/380 (2%)
Query: 399 KDKEEKDKEKAKDPDKEKGKEKDTERKVETEKEKLKGVE----GTNLDALLQRLPGCVSR 454
K K E +++ AK P E + +T + E ++ + G +DA+L RLP ++
Sbjct: 414 KKKSETEEQTAKKP--ESAESTETTKAPEPIDDQSMAIANKTIGAQVDAILARLPDLTNK 471
Query: 455 DLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQ 514
D+IDQ ++FC+LNSK++R RLV+AL VP+ +LLP ++R+VATL M DV L+
Sbjct: 472 DIIDQTAIDFCFLNSKASRNRLVKALTEVPKGRSDLLPSWARLVATLGRYMPDVPKGLVD 531
Query: 515 MLEEEFNFLINKKDQMNI-ETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNID 573
L+ EF L +K++ + + ++ NIR++ EL KF + P +VF CLK LDDF+ NI+
Sbjct: 532 YLDAEFRSLQRRKEKDFLGQVRLSNIRYLAELTKFGVVPEHVVFHCLKVSLDDFSRMNIE 591
Query: 574 VACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERS 633
+ CNL+E CGR+L R+PET+ RMA+ LE L R K+V+++ L++NA Y PPER
Sbjct: 592 ILCNLIENCGRYLLRNPETAPRMASFLETLQRKKSVQHIGQPERMLIDNAVYHVDPPERP 651
Query: 634 ARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKY 691
A K R P+ +IRKL++ D+ K + +L+Q+R+L W + E + L K F K K KY
Sbjct: 652 AIEQKERTPMELFIRKLIYGDMTKRNYSKILKQIRRLHWEETEVVAILEKVFSKPGKVKY 711
Query: 692 GQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNY 751
G IHL+ L + L R+H F V ++D VLE I GLE ND+ QRR+A +++LGELYNY
Sbjct: 712 GNIHLLGILLSALYRHHPHFVVKIIDNVLESICFGLEQNDFRFSQRRVAEVKYLGELYNY 771
Query: 752 EHVDSSVIFDTLYLILVFGH 771
++ VIFDT+Y I++FG+
Sbjct: 772 RMLEHPVIFDTMYKIVLFGY 791
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 156/378 (41%), Gaps = 71/378 (18%)
Query: 61 LKICSLLHQRYKDFSPC-LIDGLLKVFFPGKSGEDLDADRNLKA-----------MKKRS 108
++I S LHQR F P + L + G + D + ++L A ++R+
Sbjct: 93 VEIVSALHQR---FGPTEFTEYLTWLLGKGMATPDKNILKSLPAEVREKEEKERITRQRA 149
Query: 109 TLKLLLELYFIGII---EDSSIFINIIKDLTS---------------------IEHLKD- 143
L+++ EL+ +G++ +D+S + K T +E LKD
Sbjct: 150 LLRVITELWLVGVLRTLDDASKPDDATKGATGKSVELKTRGNSKPGGSSDPFPLEVLKDL 209
Query: 144 --RDTTQTNLTLLASFARQ-GRIFLGLPLSGP-------------GQEIYEEFFKGLNIT 187
D NL LL F + LG+ + P G++ E + T
Sbjct: 210 LGYDREHANLPLLVIFVKAFSWDILGIRTTTPESRKPGEDDSLPTGEDATEPSTEDQPFT 269
Query: 188 ADQ-KKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRK 246
+ + FK+ Y++ V + + S+ NA+ GE+ E+ ++YEK K
Sbjct: 270 PPELAEKFKEILKKYFDDVANHIVRDQKSIHSQARRNAEAYVKSGEVFEDRQANYEKQVK 329
Query: 247 SYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASG---KDSSVPEPVWDDEE 303
+ D L N +A+A+ + P + + ++ +G + + +W+DE+
Sbjct: 330 AQDRLVANAQVIADAIGAEMPSLKDSNDPLAASNSSIGLVKTGDYLRSMADGAGIWEDED 389
Query: 304 TRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQP-------TDPASEP--DQGQLA 354
R FYE L DL+ VPA+LL + + K +E + ++P T A EP DQ
Sbjct: 390 ERRFYENLVDLKGKVPAILLDDGKKKKSETEEQTAKKPESAESTETTKAPEPIDDQSMAI 449
Query: 355 AQDT--AEVSADLGASPE 370
A T A+V A L P+
Sbjct: 450 ANKTIGAQVDAILARLPD 467
>gi|256082795|ref|XP_002577638.1| hypothetical protein [Schistosoma mansoni]
Length = 1104
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 155/337 (45%), Positives = 227/337 (67%), Gaps = 9/337 (2%)
Query: 441 LDALLQRLPGCVSRDLIDQLTVEFCY-LNSKSNRKRLVRALFNVPRTSLELLPYYSRMVA 499
++ L +LP C++RDLID+ ++FC LN ++NR+RL +ALFNVPRT +LLP+Y+R VA
Sbjct: 468 METFLTQLPNCINRDLIDRAAIDFCLNLNKRANRRRLAKALFNVPRTRYDLLPFYARFVA 527
Query: 500 TLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSC 559
+L+ M D+ + ML EF + ++K+DQ+NIE+K++ +RFIGEL KFKI PA +C
Sbjct: 528 SLAPVMPDLVQDINSMLTAEFRWRLSKRDQLNIESKLKVVRFIGELVKFKIYPAHQALTC 587
Query: 560 LKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTL 619
LK L F HHNID+AC LL++CGRFLYR P + R LEI++R K ++D R+ +
Sbjct: 588 LKQLLPQFVHHNIDMACALLDSCGRFLYRLPISHKRTKVYLEIMLRKKVALHMDQRYSIM 647
Query: 620 VENAYYLCKPPERSARVSKVRP----PLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDC 675
+EN YY C PP + ++ V P P +IR +L + LD++++ LR +RK+ W+D
Sbjct: 648 IENTYYYCNPPPSNRQI--VEPVKLTPQMMFIRHILLTKLDRTTVNTTLRLIRKMDWNDQ 705
Query: 676 ESYLLKC--FMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYG 733
E C F + +Y I+ +AS+ +GL+ YH +FA+AVVD V+E+IR+G+ELN
Sbjct: 706 ELVEFTCTLFTRAWDVRYTNINCLASVLSGLATYHSDFAMAVVDNVIEDIRVGMELNLPS 765
Query: 734 MQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
+ QRR+ +++LG LYNY VDS VIF TLY +L FG
Sbjct: 766 LNQRRIVMVKYLGLLYNYCLVDSPVIFKTLYSLLTFG 802
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 154/336 (45%), Gaps = 44/336 (13%)
Query: 59 YFLKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYF 118
+ LK+CS ++QRY DF D K F S +DL +N K R L L +L
Sbjct: 100 FMLKLCSAMYQRYSDFGVLFFDAWKKSF---SSHKDL---KNTNLSKLRVDLALFADLNT 153
Query: 119 IGIIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ------GRIFLGLPLSGP 172
IGI D+ I ++ ++ D D +N+ +L+SF R G I + L
Sbjct: 154 IGIFRDAD-GIRLLAGQLTLLAANDHDNF-SNIGILSSFCRHCSDDWVGVIPRRIRLLSE 211
Query: 173 GQEIYEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGE 232
E+ + + ++++++ + F+ Y A LQ +++ + N L ++GE
Sbjct: 212 KYEM--PVPRSIFMSSERQAKCRTLFNDYLAAAMHRLQNMVKETQRIISGNRDQLESRGE 269
Query: 233 LSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASGK-D 291
+SEE E L + + ++S+LA+ LD PP+ + +S GK D
Sbjct: 270 VSEERQERAEHLMSACRKFHESLSTLADLLDADPPL-------------DFSSMIKGKFD 316
Query: 292 SSVPEPV------WDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPA 345
+V + V ++DE+TR FYE LPD++A VPA+L E+E E S + + DPA
Sbjct: 317 FTVYKVVHEEVNLFEDEDTRLFYESLPDIKAMVPAILYKESEQAGIE-SNQSKNEYGDPA 375
Query: 346 SEPD------QGQLAAQDT-AEVSADLGASPEGKSV 374
D + +LA ++ VS D S SV
Sbjct: 376 GSEDIDIDTVESELAKEEALIRVSEDGNESTNCTSV 411
>gi|347830414|emb|CCD46111.1| similar to nonsense-mediated mRNA decay factor (Upf2) [Botryotinia
fuckeliana]
Length = 1241
Score = 320 bits (821), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 162/387 (41%), Positives = 241/387 (62%), Gaps = 17/387 (4%)
Query: 403 EKDKEKAKDPDKEKGKEKDTERKV----------ETEKEKLKGVE----GTNLDALLQRL 448
E K+K D D++ GK+ DT + T+ ++ + G +DALL RL
Sbjct: 439 EDGKKKKTDTDEQVGKKVDTSEIIPAESTAPTAKTTDDDQSTAIANKTIGAQVDALLARL 498
Query: 449 PGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDV 508
P ++DLID+ ++FC+LNSK++R RL++A+ +P+ +LLP YSR+VATL M D+
Sbjct: 499 PDLTNKDLIDEAAIDFCFLNSKASRNRLIKAVQEIPKGRSDLLPSYSRLVATLGKYMPDI 558
Query: 509 SSMLIQMLEEEFNFLINKKDQMNI-ETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDF 567
L+ L++EF L +K++ + + ++ NIR++ EL KF + P ++F CLK LDDF
Sbjct: 559 IKGLVDHLDQEFRSLQRRKEKEFLGQARLGNIRYLAELTKFGVVPEHVIFHCLKVSLDDF 618
Query: 568 THHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLC 627
+ NI++ CNLLE CGR+L R+P+ S RM + LE L R K+V+++ + L+ENA Y
Sbjct: 619 SRMNIEIICNLLENCGRYLLRNPDMSPRMTSFLETLKRKKSVQHIGQQERMLIENAVYYV 678
Query: 628 KPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMK 685
PP R K R P+ +IRKL++SD+ + ++R +R+L W + E + L K K
Sbjct: 679 DPPLRPTIQQKERTPIDLFIRKLVYSDMTTRNYARIIRSIRRLHWEESEVVTILEKVLSK 738
Query: 686 VHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFL 745
K KYG I+L+A +T+ L RYH F + V+D VLE I +GLE ND+ QRR+A ++L
Sbjct: 739 PGKVKYGNIYLLAIVTSALFRYHQGFVITVIDNVLEYIIVGLEQNDFKFNQRRIAEAKYL 798
Query: 746 GELYNYEHVDSSVIFDTLYLILVFGHG 772
GELYN+ VD VIFDT+Y IL FGHG
Sbjct: 799 GELYNFRMVDHPVIFDTMYRILTFGHG 825
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 89/195 (45%), Gaps = 18/195 (9%)
Query: 194 FKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYR 253
F+ + Y+ V+ + + ++ + ++++ G+L E+ ++YEK K+ + L
Sbjct: 306 FRNILNRYFEDVKAHIIRDQKAIAKQARKDSEAYVKSGQLFEDRQANYEKALKAQERLVS 365
Query: 254 NVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASG---KDSSVPEPVWDDEETRAFYEC 310
N LAE++ + P + + ++ + +G +G + +W+DE+ R FYE
Sbjct: 366 NAQVLAESIGAEMPDLKDSDDSSALGNGGVGLVKAGDYLRGEGEGAGIWEDEDERRFYEN 425
Query: 311 LPDLRAFVPAVLLGEAEHKANE-----------PSVKPLEQ--PTDPASEPDQGQLAAQD 357
L DL+ VP +LL + + K + + P E PT ++ DQ A
Sbjct: 426 LVDLKGKVPGMLLEDGKKKKTDTDEQVGKKVDTSEIIPAESTAPTAKTTDDDQSTAIANK 485
Query: 358 T--AEVSADLGASPE 370
T A+V A L P+
Sbjct: 486 TIGAQVDALLARLPD 500
>gi|353230222|emb|CCD76393.1| hypothetical protein Smp_156450.1 [Schistosoma mansoni]
Length = 1103
Score = 320 bits (821), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 155/337 (45%), Positives = 227/337 (67%), Gaps = 9/337 (2%)
Query: 441 LDALLQRLPGCVSRDLIDQLTVEFCY-LNSKSNRKRLVRALFNVPRTSLELLPYYSRMVA 499
++ L +LP C++RDLID+ ++FC LN ++NR+RL +ALFNVPRT +LLP+Y+R VA
Sbjct: 468 METFLTQLPNCINRDLIDRAAIDFCLNLNKRANRRRLAKALFNVPRTRYDLLPFYARFVA 527
Query: 500 TLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSC 559
+L+ M D+ + ML EF + ++K+DQ+NIE+K++ +RFIGEL KFKI PA +C
Sbjct: 528 SLAPVMPDLVQDINSMLTAEFRWRLSKRDQLNIESKLKVVRFIGELVKFKIYPAHQALTC 587
Query: 560 LKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTL 619
LK L F HHNID+AC LL++CGRFLYR P + R LEI++R K ++D R+ +
Sbjct: 588 LKQLLPQFVHHNIDMACALLDSCGRFLYRLPISHKRTKVYLEIMLRKKVALHMDQRYSIM 647
Query: 620 VENAYYLCKPPERSARVSKVRP----PLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDC 675
+EN YY C PP + ++ V P P +IR +L + LD++++ LR +RK+ W+D
Sbjct: 648 IENTYYYCNPPPSNRQI--VEPVKLTPQMMFIRHILLTKLDRTTVNTTLRLIRKMDWNDQ 705
Query: 676 ESYLLKC--FMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYG 733
E C F + +Y I+ +AS+ +GL+ YH +FA+AVVD V+E+IR+G+ELN
Sbjct: 706 ELVEFTCTLFTRAWDVRYTNINCLASVLSGLATYHSDFAMAVVDNVIEDIRVGMELNLPS 765
Query: 734 MQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
+ QRR+ +++LG LYNY VDS VIF TLY +L FG
Sbjct: 766 LNQRRIVMVKYLGLLYNYCLVDSPVIFKTLYSLLTFG 802
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 154/336 (45%), Gaps = 44/336 (13%)
Query: 59 YFLKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYF 118
+ LK+CS ++QRY DF D K F S +DL +N K R L L +L
Sbjct: 100 FMLKLCSAMYQRYSDFGVLFFDAWKKSF---SSHKDL---KNTNLSKLRVDLALFADLNT 153
Query: 119 IGIIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ------GRIFLGLPLSGP 172
IGI D+ I ++ ++ D D +N+ +L+SF R G I + L
Sbjct: 154 IGIFRDAD-GIRLLAGQLTLLAANDHDNF-SNIGILSSFCRHCSDDWVGVIPRRIRLLSE 211
Query: 173 GQEIYEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGE 232
E+ + + ++++++ + F+ Y A LQ +++ + N L ++GE
Sbjct: 212 KYEM--PVPRSIFMSSERQAKCRTLFNDYLAAAMHRLQNMVKETQRIISGNRDQLESRGE 269
Query: 233 LSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASGK-D 291
+SEE E L + + ++S+LA+ LD PP+ + +S GK D
Sbjct: 270 VSEERQERAEHLMSACRKFHESLSTLADLLDADPPL-------------DFSSMIKGKFD 316
Query: 292 SSVPEPV------WDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPA 345
+V + V ++DE+TR FYE LPD++A VPA+L E+E E S + + DPA
Sbjct: 317 FTVYKVVHEEVNLFEDEDTRLFYESLPDIKAMVPAILYKESEQAGIE-SNQSKNEYGDPA 375
Query: 346 SEPD------QGQLAAQDT-AEVSADLGASPEGKSV 374
D + +LA ++ VS D S SV
Sbjct: 376 GSEDIDIDTVESELAKEEALIRVSEDGNESTNCTSV 411
>gi|302661445|ref|XP_003022390.1| hypothetical protein TRV_03454 [Trichophyton verrucosum HKI 0517]
gi|291186333|gb|EFE41772.1| hypothetical protein TRV_03454 [Trichophyton verrucosum HKI 0517]
Length = 1170
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 194/582 (33%), Positives = 293/582 (50%), Gaps = 76/582 (13%)
Query: 194 FKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYR 253
FK + Y V++ + + +L NA+ GE+ E+ S++EK K+++ L
Sbjct: 299 FKNVLNRYLEDVKKHVSRDQKALANQSRRNAEAYVKSGEILEDRQSNFEKQTKAHEKLVS 358
Query: 254 NVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASG---KDSSVPEPVWDDEETRAFYEC 310
N SL E L ++ P + E + SG +G + +W+DEE R FYE
Sbjct: 359 NTQSLCEILGVEMPDLAEKDASDGAMSGSIGLVKTGEYLRGQGEGAGIWEDEEERRFYEN 418
Query: 311 LPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTAEVSADLGASPE 370
L D + VPAVLL + + K A DQ ++ + A+PE
Sbjct: 419 LADFKGKVPAVLLEDGKKKK--------------ADGDDQSKVKPDSEGQNGT---AAPE 461
Query: 371 GKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEKDTERKVETEK 430
G S K + A++P++ +K
Sbjct: 462 GTS----KPDSQAADSSAREPEESGTTIANKSV--------------------------- 490
Query: 431 EKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLEL 490
G +DALL +LP +++ +DQL ++FC+LNSK++R RLV+A+ VP+ +L
Sbjct: 491 -------GAQVDALLSKLPELANKEAVDQLALDFCFLNSKASRNRLVKAVQEVPKGRSDL 543
Query: 491 LPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNI-ETKIRNIRFIGELCKFK 549
LP Y+R+VATL + DV LI L++EF L +K + + + + NIR++ EL KF
Sbjct: 544 LPLYARLVATLGQYLPDVPQGLITYLDDEFRSLQRRKQKEFLGQVRTSNIRYLAELTKFG 603
Query: 550 IAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNV 609
+ P ++F C K LD+F+ NI++ NLLE CGR+L R+PET+ RMA+ LE L R K+
Sbjct: 604 VVPEHVIFHCFKVSLDEFSRMNIEIIGNLLENCGRYLLRNPETAPRMASFLETLGRKKSA 663
Query: 610 KNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRK 669
++L + ++ENA Y PP R A K + ++ H R
Sbjct: 664 QHLGQQERMIIENAMYYVDPPPRPAIQQK-----------------EPATFIHHFTSSRI 706
Query: 670 LPWSDCESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLEL 729
L W + L + F K K KYG IHL+A + + L RYH F + V+D VLE I +GLE
Sbjct: 707 LTWFQVVNILERIFSKPGKIKYGNIHLLAIIISALYRYHQSFVIGVIDNVLERITIGLEN 766
Query: 730 NDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
ND+ Q R++ +++LGELYNY+ VDS VIFDTLY I+ +GH
Sbjct: 767 NDFKFNQSRISEVKYLGELYNYKMVDSPVIFDTLYRIVTYGH 808
>gi|195168701|ref|XP_002025169.1| GL26901 [Drosophila persimilis]
gi|194108614|gb|EDW30657.1| GL26901 [Drosophila persimilis]
Length = 1133
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 216/704 (30%), Positives = 350/704 (49%), Gaps = 55/704 (7%)
Query: 94 DLDADRNLKAMKKRSTLKLLLELYFIGIIEDSS-------IFINIIKDLTSIEHLKDRDT 146
++ A++ K R L+L EL G+I+ + + +I +D+D
Sbjct: 82 NIKAEKISNPSKLRVDLRLFAELISSGVIQMKPGLALLGMVLVQLIG--------QDKDG 133
Query: 147 TQTNLTLLASFARQ-GRIFLGLPLSGPGQEIYE---EFFKGLNITADQKKIFKKAFHTYY 202
N +++ SF R G + GL Q + E K + AD++ + Y+
Sbjct: 134 -HNNFSIILSFCRHCGEEYAGLVPQKMQQLALKYGVEVPKSDFLAADKQANLRTMLKGYF 192
Query: 203 NAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYRNVSSLAEAL 262
A+ + + AE T L M + + KGE+S E E ++ S+D L + +L+E L
Sbjct: 193 KALCKHVLAEQTELMNMTKNIRRTMECKGEISSEKREKCEMMQASFDKLLASAQTLSELL 252
Query: 263 DMQPPVMPEDVHTTRVTSGEDASPASGKDS-------SVPEPVWDDEETRAFYECLPDLR 315
P + ++ E SP + D+ V +P W DEETRAFY LPDLR
Sbjct: 253 AEPLPELAKE--------SECCSPGTVIDNMLDSAAFGVLDP-WGDEETRAFYTDLPDLR 303
Query: 316 AFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTAEVSADLGASPEGKSVE 375
F+P + A + ++ +E+P++ E L A+ + + P +++
Sbjct: 304 QFLP-------DFSAPKVDLETMEEPSELTEEAIDANLDAEMDIDDPPSTNSDPPSENIA 356
Query: 376 KGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEKDTERKVETEKEKLKG 435
+ ++ P G + +K E G+++ + + +
Sbjct: 357 E-------DQPPPSTPPLLATTGSSANDLKPQKMCSALMELGRQQ--LQSQPQPTAQTQQ 407
Query: 436 VEGTNLDALLQRLPGCVSRDLIDQLTVEFCY-LNSKSNRKRLVRALFNVPRTSLELLPYY 494
D L L CV+++LID +EF N+K RK+L R +F+V RT L++LPY
Sbjct: 408 QIRQQFDIFLVNLFNCVNKELIDSAAIEFLLNFNTKHQRKKLTRTIFSVQRTRLDILPYL 467
Query: 495 SRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAG 554
SR +A + C DV++ L ++L +EF + I KK+Q+NIE+K++ +RFIGE KF +
Sbjct: 468 SRFMAIVHMCNTDVAADLSELLRKEFKWHIRKKNQLNIESKLKIVRFIGEQVKFGLFKKF 527
Query: 555 LVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDP 614
CLK L DF HH I++AC +E G +LY ++ + M L+ ++RLK +D
Sbjct: 528 DALGCLKMLLRDFQHHQIEMACAFVEVTGVYLYNCRDSRLLMNVFLDQMLRLKMATAMDS 587
Query: 615 RHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPW-- 672
RH +E+ YYL KPPE S R S RP +H+YIR L+F +L K ++E ++ LR++ W
Sbjct: 588 RHAAQIESVYYLVKPPESSKRESAPRPVIHEYIRHLIFEELCKQNVERCIKMLRRIDWLD 647
Query: 673 SDCESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDY 732
D Y +KC K ++ I +A L +GLS Y V+D V E+IR GLE++
Sbjct: 648 PDTSGYAIKCLSKAFLLRFPLIRCLADLVSGLSSYQPRAVTIVIDNVFEDIRAGLEIHSP 707
Query: 733 GMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHGTAET 776
M QRR+A ++LGE+YNY+ V+S+ I +TLY I+ G T ++
Sbjct: 708 RMAQRRIAMAKYLGEMYNYKLVESTHILNTLYSIISLGVSTDQS 751
>gi|346325084|gb|EGX94681.1| nonsense-mediated mRNA decay factor (Upf2) [Cordyceps militaris
CM01]
Length = 1150
Score = 319 bits (818), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 164/382 (42%), Positives = 237/382 (62%), Gaps = 10/382 (2%)
Query: 403 EKDKEKAKDPDKEKGKEKDTERKVET----EKEKL---KGVEGTNLDALLQRLPGCVSRD 455
E K+K D + + GK+ D V E + + G +DALL RLP S++
Sbjct: 414 EDGKKKKADSEDQVGKKVDESESVAAADLAEDQSMAIANKTTGAQVDALLARLPDLTSKE 473
Query: 456 LIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQM 515
IDQ+ ++FCYLNSK++R RLV+AL VP+ +LLP +SR+VATL M D+ L+
Sbjct: 474 TIDQMAIDFCYLNSKASRNRLVKALTEVPKGRGDLLPSWSRLVATLGRYMTDIPKGLVDY 533
Query: 516 LEEEFNFLINKKDQMNI-ETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDV 574
L+ EF L +K++ + + ++ NIR++ EL KF + P +VF CLK LDDF+ NI++
Sbjct: 534 LDAEFRSLQRRKEKDFLGQVRLGNIRYLAELTKFGVVPEHVVFHCLKVSLDDFSRMNIEI 593
Query: 575 ACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSA 634
CNLLE CGR+L ++P T+ RM + LE L R K+V+++ L++NA Y PPER A
Sbjct: 594 LCNLLENCGRYLLKTPGTAPRMVSFLETLQRKKSVQHIGQPERMLIDNAVYYVDPPERPA 653
Query: 635 RVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWS--DCESYLLKCFMKVHKGKYG 692
K R P+ +IRKL+++D+ K + +L+Q+R+L W D + L K F K K KYG
Sbjct: 654 IEQKERTPMDLFIRKLVYNDMTKRNYSKILKQIRRLHWEEIDVVAMLEKVFSKPGKVKYG 713
Query: 693 QIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYE 752
+HL+A L + L RYH F V V+D V+E I GLE ND+ QRR+A +++L ELYNY
Sbjct: 714 NVHLLAILLSALYRYHPAFVVKVIDNVVESISFGLEQNDFRTFQRRVAEVKYLSELYNYR 773
Query: 753 HVDSSVIFDTLYLILVFGHGTA 774
++ VIFD +Y IL FG+G A
Sbjct: 774 MLEHPVIFDAMYKILTFGYGGA 795
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 134/326 (41%), Gaps = 58/326 (17%)
Query: 62 KICSLLHQRY------KDFSPCLIDGLL---KVFFPGKSGEDLDADRNLKAMKKRSTLKL 112
+I S LHQR+ + S L G+ K S E + + + ++R+ L++
Sbjct: 94 EIASALHQRFGPAEFTEHLSWLLGRGMATPEKSALKALSQELREKEEKDRLTRQRALLRV 153
Query: 113 LLELYFIGII-------------EDSSIFINIIKDLTS-----------IEHLKD---RD 145
+ EL+ +G++ + S+ + IK TS +E LKD D
Sbjct: 154 VTELWLLGVLRTLDDAVKPDETTKASASKVAEIKPRTSTKNGTSADPFPLEVLKDLLGYD 213
Query: 146 TTQTNLTLLASFARQ-GRIFLGL-PLSGPGQEIYEEFFKGLN-----------------I 186
TNL LL F + LG+ P G++ EE
Sbjct: 214 REHTNLPLLVIFVKAFSWDVLGVKPSHADGRKTIEEDGAAAEPAQPATDAEDNRPDQPFT 273
Query: 187 TADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRK 246
+ + + FK Y+ V+ + + S+ NA+ GE+ E+ ++YEK K
Sbjct: 274 SPELSEKFKNILKKYFEDVKTHIIRDQKSIHSQARRNAEAYVKSGEVFEDRQANYEKQVK 333
Query: 247 SYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASG---KDSSVPEPVWDDEE 303
+ D L N +A+A+ + P + + + + +G + S+ +WDD+E
Sbjct: 334 AQDRLVSNAQVIADAIGAEIPDLKDSDDSLNASGAGIGLVKTGEYLRSSADGSGIWDDDE 393
Query: 304 TRAFYECLPDLRAFVPAVLLGEAEHK 329
R FYE L DL+ VP++LL + + K
Sbjct: 394 ERRFYENLVDLKGKVPSMLLEDGKKK 419
>gi|451993644|gb|EMD86117.1| hypothetical protein COCHEDRAFT_1116841 [Cochliobolus
heterostrophus C5]
Length = 1204
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 162/394 (41%), Positives = 246/394 (62%), Gaps = 10/394 (2%)
Query: 382 EKEKEKAKDPDKEKGKGKD--KEEKDKEKAKDPDKEKGKEKDTERKVETEKEKLKGVEGT 439
E+ K+K D D++ GK + E +KE A K + D + K G
Sbjct: 420 EEVKKKKADGDEQVGKKIEPKTESSEKEAADAVADSKAADGDDQSTAIANKSV-----GA 474
Query: 440 NLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVA 499
+DALL RLP ++D +DQ ++FC+LNSK++R RL++A+ +P+ +LLP YSR++A
Sbjct: 475 QVDALLARLPELATKDAVDQTAMDFCFLNSKASRNRLIKAVQEIPKGRSDLLPLYSRLIA 534
Query: 500 TLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNI-ETKIRNIRFIGELCKFKIAPAGLVFS 558
TL M DV L+ L+EEF L +K + + + + +N+R++ EL KF + P ++F
Sbjct: 535 TLGKYMSDVPQGLVSYLDEEFRSLQRRKSKDFLGQVRTQNVRYLAELTKFGVVPEHVIFH 594
Query: 559 CLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVT 618
CLK LDDF+ NI++ CNLLE CGR+L R+PETS RMA+ LE L R K + + +
Sbjct: 595 CLKVSLDDFSRMNIEIICNLLENCGRYLLRNPETSPRMASFLETLQRKKAAQVIGQQERM 654
Query: 619 LVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPW--SDCE 676
L+ENA Y PP+R+A K R P+ ++RK+++ DL + S++ ++Q+RK+ W D
Sbjct: 655 LIENAVYYVNPPQRAAIEQKERTPIELFLRKIMYQDLTRRSLDKTIKQIRKMHWEEEDVV 714
Query: 677 SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQ 736
+ L K F K K KY IHL+A + + R+H +FA++VVD++LE I GLELND+ Q
Sbjct: 715 NLLHKVFAKPGKIKYSNIHLLAVMLGTIHRFHQDFAISVVDDLLESITFGLELNDFKFNQ 774
Query: 737 RRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
RR++ +++LGELY Y VDS ++FDTLY +L +G
Sbjct: 775 RRISEVKYLGELYIYRLVDSPLVFDTLYKLLNYG 808
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 87/195 (44%), Gaps = 7/195 (3%)
Query: 186 ITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLR 245
I+ + ++ FK Y+ V+ + + + +NA+ GE+ E+ S+YEK
Sbjct: 279 ISPELQQRFKNILTRYFEDVKAHVLRDQKHILSQGRKNAEAYVKSGEVFEDRQSNYEKQM 338
Query: 246 KSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASG---KDSSVPEPVWDDE 302
KS + L N LA+AL+ P + E + G +G + S +W+DE
Sbjct: 339 KSQEKLIANAQILADALNTDMPDLKEKDGSANTGDGSIGLIKAGEYLRGQSDGAGIWEDE 398
Query: 303 ETRAFYECLPDLRAFVPAVLLGEAEHK---ANEPSVKPLEQPTDPASEPDQGQLAAQDTA 359
E R FYE L DL+ VP +LL E + K +E K +E P +SE + A A
Sbjct: 399 EERRFYENLIDLKDRVPGILLEEVKKKKADGDEQVGKKIE-PKTESSEKEAADAVADSKA 457
Query: 360 EVSADLGASPEGKSV 374
D + KSV
Sbjct: 458 ADGDDQSTAIANKSV 472
Score = 42.7 bits (99), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 70/168 (41%), Gaps = 31/168 (18%)
Query: 497 MVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLV 556
M+ T+ +D + ++ L E F + D + +I ++++GEL +++ + LV
Sbjct: 738 MLGTIHRFHQDFAISVVDDLLESITFGLELNDFKFNQRRISEVKYLGELYIYRLVDSPLV 797
Query: 557 FSCLKACL--------------------DDFTHHNIDVACNLLETCGRFLYRSPETSIRM 596
F L L DD+ I + CNLLETCG + Y ++
Sbjct: 798 FDTLYKLLNYGWEGGYIRPGVYNPLDLPDDY--FRIRLVCNLLETCGMY-YDKGAAKKKL 854
Query: 597 ANMLEILMRLKNVKNLDPRHVT-LVENAYYLCKP-------PERSARV 636
L L +K P V +V++AY L +P PE ++R
Sbjct: 855 DFFLTFLQYYVCMKEALPMDVEFIVQDAYNLVRPQWKMITDPEEASRA 902
>gi|358336172|dbj|GAA33523.2| regulator of nonsense transcripts 2 [Clonorchis sinensis]
Length = 1020
Score = 318 bits (816), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 152/335 (45%), Positives = 225/335 (67%), Gaps = 5/335 (1%)
Query: 441 LDALLQRLPGCVSRDLIDQLTVEFCY-LNSKSNRKRLVRALFNVPRTSLELLPYYSRMVA 499
++ L +LP C++RDLID+ ++FC LN +SNR+RL RAL VPRT +LLP+Y+R+VA
Sbjct: 138 METFLTQLPNCINRDLIDRAAIDFCLNLNKRSNRRRLARALLMVPRTRYDLLPFYARLVA 197
Query: 500 TLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSC 559
L+ M D+ + + ML EF + ++K+DQMN+E+K++ +RFIGEL KF+I P
Sbjct: 198 ALAPVMPDLVADVNTMLTGEFRWRVSKRDQMNLESKLKIVRFIGELVKFRIFPTHQALGL 257
Query: 560 LKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTL 619
LK L F HHNI++AC LL+TCGRFLYR P + R LE+++R K ++D R+ +
Sbjct: 258 LKQLLPQFVHHNIEMACALLDTCGRFLYRLPTSHKRTKVYLEVMLRKKTALHMDQRYTIM 317
Query: 620 VENAYYLCKPPERSARVSKVR--PPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE- 676
+EN YY C PP + V++ P QY+R+LL+ DLD+S++ VLR +RK+ W D E
Sbjct: 318 IENTYYYCNPPPSTRHVAESVNLTPTMQYLRRLLWRDLDRSTVNSVLRSIRKIDWDDTEL 377
Query: 677 -SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQ 735
++ F + + +Y I+ +AS+ +GL+ +H FA AVVD V+E+IR+G+ELN +
Sbjct: 378 VNFAEVLFTRAWELRYTNINCLASVLSGLAVFHTNFATAVVDNVIEDIRVGMELNLSQLN 437
Query: 736 QRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
QRR++ +++LG LYNY VDS VIF LY +L FG
Sbjct: 438 QRRISMVKYLGLLYNYCLVDSPVIFKMLYSLLTFG 472
>gi|169605799|ref|XP_001796320.1| hypothetical protein SNOG_05928 [Phaeosphaeria nodorum SN15]
gi|160706844|gb|EAT86992.2| hypothetical protein SNOG_05928 [Phaeosphaeria nodorum SN15]
Length = 1195
Score = 318 bits (815), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 159/379 (41%), Positives = 242/379 (63%), Gaps = 4/379 (1%)
Query: 395 KGKGKDKEEKDKEKAKDPDKEKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSR 454
K K D ++ EK KD + + K E ++ K V G +DA+L RLP ++
Sbjct: 423 KKKKPDGDDSTNEKEKDVAEPSAEVKSAEADDQSTTIANKSV-GAQVDAILARLPELNTK 481
Query: 455 DLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQ 514
D +DQ ++F +LNSK++R RL++A+ +P+ +LLP YSR++ATLS M DVS L+
Sbjct: 482 DAVDQAAMDFGFLNSKASRNRLIKAVQEIPKGRSDLLPIYSRLIATLSKYMPDVSQGLVS 541
Query: 515 MLEEEFNFLINKKDQMNI-ETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNID 573
L++EF L +K + + + + +N+R++ EL KF + P ++F CLK LDDF+ NI+
Sbjct: 542 YLDDEFRSLQRRKSKDFLGQVRTQNVRYLAELTKFGVVPEHVIFHCLKVSLDDFSRMNIE 601
Query: 574 VACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERS 633
+ CNLLE CGR+L R+PETS RMA+ LE L R K+ + L + L+ENA Y PPER+
Sbjct: 602 IICNLLENCGRYLLRNPETSPRMASFLETLQRKKSAQVLGQQERMLIENAVYYVNPPERA 661
Query: 634 ARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPW--SDCESYLLKCFMKVHKGKY 691
A K R P+ ++RK+++ DL + +++ ++Q+RK+ W D + L K F K K KY
Sbjct: 662 AIEQKERTPIELFLRKIMYQDLTRRTLDKTVKQIRKMHWEEDDIVNLLHKVFAKPGKIKY 721
Query: 692 GQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNY 751
IHL+A + + RYH +F ++V+D++LE I GLELND+ QRR+A +++LGELY Y
Sbjct: 722 SNIHLLAVILGTIHRYHQDFGISVIDDLLESITFGLELNDFKFNQRRIAEVKYLGELYIY 781
Query: 752 EHVDSSVIFDTLYLILVFG 770
VDS ++FDTLY +L +G
Sbjct: 782 RLVDSPLVFDTLYKLLNYG 800
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 97/421 (23%), Positives = 160/421 (38%), Gaps = 79/421 (18%)
Query: 21 CTKFPFCIKNKSNCICKYIANIYIYTYTLLLGLWLT--LVYFLKICSLLHQRYKDFSPCL 78
++ F + +S + KY++ I Y L L + ++I S LHQR F P
Sbjct: 51 ASQAQFIQEIRSLSLHKYLSEIISACYEGLCKLKTPGEIGAGVEIVSALHQR---FGPTE 107
Query: 79 IDGLLKVFF------PGKS------GEDLDADRNLKAMKKRSTLKLLLELYFIGII---- 122
G + + P KS E D + + ++R L++ EL+ +G++
Sbjct: 108 FTGYIGWYIGRGLATPDKSHLKTLSPEVRDREEKERLARQRVLLRVATELWLVGVLRSLD 167
Query: 123 -----------EDSSIFI-----------NIIKDLTSIEHLKD---RDTTQTNLTLLASF 157
+D+ + N + +E LKD D NL L+ F
Sbjct: 168 DVARPEEAGKGKDTGKLVEGPAKTRARAENADAEPFPLEVLKDMLGHDREHVNLPLVVIF 227
Query: 158 ARQ--GRIFLGLPLSGPGQEIYEEFFKGLNITADQ-----------------------KK 192
+ I P S G++ E G TA ++
Sbjct: 228 VKAFAWDILGSKPASAEGRKTVHE--DGTTTTAKNEENSASESDEQVSKDPPIISSELQQ 285
Query: 193 IFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLY 252
FK Y+ V+ L + + +NA+ GE+ E+ S+YEK K+ + L
Sbjct: 286 RFKNVLLRYFEDVKAHLLRDQKHILSQGRKNAEAYVKSGEVFEDRQSNYEKQMKAQERLI 345
Query: 253 RNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASG---KDSSVPEPVWDDEETRAFYE 309
N LA+AL ++ P + E G +G + S +W+DE+ R FYE
Sbjct: 346 GNGQVLADALGVEMPDLKEKDTAANTGDGAIGLVKTGEYLRGLSDGPGIWEDEDERRFYE 405
Query: 310 CLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTD---PASEPDQGQLAAQDTAEVSADLG 366
L DL+ VP VLL +A+ K + E+ D P++E + Q T + +G
Sbjct: 406 NLIDLKDRVPIVLLEDAKKKKPDGDDSTNEKEKDVAEPSAEVKSAEADDQSTTIANKSVG 465
Query: 367 A 367
A
Sbjct: 466 A 466
>gi|398391410|ref|XP_003849165.1| hypothetical protein MYCGRDRAFT_63016 [Zymoseptoria tritici IPO323]
gi|339469041|gb|EGP84141.1| hypothetical protein MYCGRDRAFT_63016 [Zymoseptoria tritici IPO323]
Length = 1147
Score = 318 bits (815), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 160/381 (41%), Positives = 245/381 (64%), Gaps = 4/381 (1%)
Query: 394 EKGKGKDKEEKDKEKAKDPDKEKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVS 453
E GK K + +++ +K + KEK E + K V G +DALL RL +
Sbjct: 427 EDGKKKKTDSEEQVGSKIDGSVESKEKAVENDDGSTAIANKTV-GAQVDALLARLHELTT 485
Query: 454 RDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLI 513
+D +DQ ++FC+LNSK++R RL++++ +P+ +LLP Y+R+VATL ++D+ +I
Sbjct: 486 KDQVDQFAIDFCFLNSKASRNRLIKSIEEIPKGRSDLLPLYARLVATLGRHLQDIPQAMI 545
Query: 514 QMLEEEFNFLINKKDQMNI-ETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNI 572
L++EF L +K + + + ++ N+R+I EL KF + P ++F CLK CLDDF+ NI
Sbjct: 546 SYLDDEFRSLQRRKSKEFLGQVRMVNMRYIAELTKFGVVPEHVIFHCLKVCLDDFSRMNI 605
Query: 573 DVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPER 632
++ NLLE CGR+L R+PETS RM + LE L R K ++L + L+ENA Y PPER
Sbjct: 606 EIIANLLENCGRYLLRNPETSPRMVSFLETLQRKKGAQHLGQQERMLIENAMYYVNPPER 665
Query: 633 SARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGK 690
+A K R L ++RKL++ DL K S++ +++Q+RKL W + E L K F+K K +
Sbjct: 666 AAIQQKERTTLDLFVRKLVYVDLSKKSLDKIIKQVRKLHWEEAEVVDMLRKIFVKPGKIR 725
Query: 691 YGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYN 750
+G I+L+A + A L R+H +FA+ V+DE+ E + +GLE+ND+ QRR+A ++LGELY
Sbjct: 726 FGNIYLLAMMLAALYRFHTDFAITVLDELQERVTVGLEINDFKYNQRRIAEAKYLGELYM 785
Query: 751 YEHVDSSVIFDTLYLILVFGH 771
Y VDSS+IFDTL+ IL +GH
Sbjct: 786 YRVVDSSLIFDTLWKILNYGH 806
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 67/139 (48%), Gaps = 3/139 (2%)
Query: 194 FKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYR 253
FK Y+ V+ + + L NA+ GE+ E+ +++EK KS + L
Sbjct: 294 FKNILLRYFEDVKAHIVRDQDRLSAQGRRNAEAYVKSGEVFEDRQNNHEKALKSQEKLVT 353
Query: 254 NVSSLAEALDMQPPVMPE-DVHTTRVTS--GEDASPASGKDSSVPEPVWDDEETRAFYEC 310
+ +LAE L + P + E D ++ + S G + + + +W+DE+ R FYE
Sbjct: 354 SAQTLAEVLGAEMPDLSEKDANSAGLESSIGLVRTGDYLRGQAEGAGIWEDEDERRFYEN 413
Query: 311 LPDLRAFVPAVLLGEAEHK 329
+ DL+ VP +LL + + K
Sbjct: 414 IVDLKDRVPGILLEDGKKK 432
Score = 39.7 bits (91), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 64/152 (42%), Gaps = 20/152 (13%)
Query: 497 MVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLV 556
M+A L D + ++ L+E + D + +I +++GEL +++ + L+
Sbjct: 735 MLAALYRFHTDFAITVLDELQERVTVGLEINDFKYNQRRIAEAKYLGELYMYRVVDSSLI 794
Query: 557 FSCL----------------KACLDDF--THHNIDVACNLLETCGRFLYRSPETSIRMAN 598
F L + C D + I +AC LLETCG + ++
Sbjct: 795 FDTLWKILNYGHKGGYAQPGEVCAMDLPDDYFRIRLACALLETCGH-CFEKGAAKKKLDF 853
Query: 599 MLEILMRLKNVKNLDPRHVT-LVENAYYLCKP 629
L L NVK+ P + +V++AY L +P
Sbjct: 854 YLSFLQLYINVKDPLPMDMEFVVQDAYSLLRP 885
>gi|409080682|gb|EKM81042.1| hypothetical protein AGABI1DRAFT_119574 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1076
Score = 318 bits (814), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 162/335 (48%), Positives = 222/335 (66%), Gaps = 4/335 (1%)
Query: 441 LDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVAT 500
L ALL RL +R LIDQ ++F +LNSK+ RKRLV+AL VP+ ++LLP+YSR+VAT
Sbjct: 428 LTALLVRLQDATNRALIDQAAIDFAFLNSKAARKRLVKALSQVPKNRVDLLPHYSRLVAT 487
Query: 501 LSTCMKDVSSMLIQMLEEEFNFLINKKDQMN--IETKIRNIRFIGELCKFKIAPAGLVFS 558
L+ M DV S L+ +LE+EF +L KK+ + E ++RNI F L KF++ P ++
Sbjct: 488 LNKYMPDVGSDLLSLLEDEFRYLQRKKNVVKELGELRMRNITFFSHLTKFRVVPPHVILH 547
Query: 559 CLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVT 618
K CLDDFT NID LLE CGRFL RS ET+ R MLE++ R +++++ D R +
Sbjct: 548 VFKVCLDDFTGTNIDNIAMLLEGCGRFLLRSEETTERFGTMLELMRRKQSLQHFDQRQIL 607
Query: 619 LVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCESY 678
L+ENAYY C PPER+ + K R + +IR L++ L K +I+ VL+ +RKL W + E
Sbjct: 608 LLENAYYQCNPPERAPKQEKHRSSIELFIRHLVYDVLAKRTIDKVLKLIRKLDWDNEEVK 667
Query: 679 LL--KCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQ 736
L+ K F K K KY I L+A LT L RY F+++VVD++LE+IR GLE N Y Q
Sbjct: 668 LVLHKVFTKPWKIKYSSISLLAMLTYDLQRYRPAFSISVVDQILEDIRRGLEQNVYSANQ 727
Query: 737 RRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
+R+A ++FLGELYNY SS+IFDTL+LI+ FGH
Sbjct: 728 KRIATIKFLGELYNYRMFSSSIIFDTLWLIVTFGH 762
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 143/300 (47%), Gaps = 36/300 (12%)
Query: 61 LKICSLLHQRY-KDFSPCLIDGLL-------KVFFPGKSGEDLDADRNLKAMKKRSTLKL 112
++I SLLH+R+ K+F+ LI L + G + E + + + +++R L++
Sbjct: 71 VEIISLLHRRFSKEFTSVLISLLSTAIGAPSRASLSGLTAEQKEKEDGARVLRQRPVLRI 130
Query: 113 LLELYFIGIIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGL---- 167
EL +G+I D + +I+ L D + ++L LL +F + R FLG+
Sbjct: 131 CSELALVGVIRDGPEKSGGEWIMKAIKELLSNDPSLSSLPLLITFLKSYSRPFLGIVPPA 190
Query: 168 -----PLSG-PG-----QEIYEE---FFKGLN------ITADQKKIFKKAFHTYYNAVQE 207
P++ PG Q + F + + D + FK+ YY+ V +
Sbjct: 191 TLKQNPVAAEPGSLSAAQSTASDDALHFPPIRNEEEELVELDIRDRFKRMCEGYYDNVCK 250
Query: 208 LLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPP 267
L EH L++ + N + GE+ E+ +YEK+ K Y+ L N SL+E L + P
Sbjct: 251 KLVMEHKRLQEQDKRNHEAYIRSGEIFEDRQQAYEKMTKGYEKLLANCQSLSELLYLPLP 310
Query: 268 VMPEDVH---TTRVTSGEDASPASGKDSSVPEPVWDDEETRAFYECLPDLRAFVPAVLLG 324
+P H + ++ S + +D++V W+DEE R FYE +PDL+ +VP+ +LG
Sbjct: 311 NLPRASHKSESIQIGSTHGSMFNDSEDTTVVGGKWEDEEERRFYEDVPDLKDYVPSSVLG 370
>gi|430813201|emb|CCJ29426.1| unnamed protein product [Pneumocystis jirovecii]
Length = 1082
Score = 318 bits (814), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 226/777 (29%), Positives = 372/777 (47%), Gaps = 145/777 (18%)
Query: 61 LKICSLLHQRYKD-FSPCLI----DGL---LKVFFPGKSGEDLDADRNLKAMKKRSTLKL 112
+++ S LHQR+ F+P L GL LK + + E + + + + +K+R L++
Sbjct: 87 IEVVSALHQRFSTLFTPFLTFQIARGLTQPLKSYMASLTPEQREKEDSQRLLKQRVLLRV 146
Query: 113 LLELYFIGIIE--DSSIFINIIKDLTS-----------------------IEHLKDRDTT 147
+EL+ +G++ + +I + ++ + S I+ + +D
Sbjct: 147 SVELWLVGVLRTLNDAIPLGVVTNTNSQLKSSKYQKRSENHTNEPFVYSIIKDIIQQDRD 206
Query: 148 QTNLTLLASFARQ-------------GRIFLGLPLSGPGQEIYEEFFKGLNITA---DQK 191
NL L+ +F R +IF G S E +++ NI+ D +
Sbjct: 207 YVNLPLIVTFVRNFATDIFCISQKRLRKIFDG-NTSENSVEFSQQYTIDENISICPFDIR 265
Query: 192 KIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHL 251
+ K Y++ ++E + EH +L+ E + ++GE++E+ ++ ++L K + L
Sbjct: 266 ENIKLLLQKYFDNLKEYIVKEHRNLKIQEKSVSDASVSRGEINEDRQNNLDRLEKHLEKL 325
Query: 252 YRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDA------------SPASGKDSSVPEPVW 299
N LA+ L + P + + EDA S K+ +W
Sbjct: 326 INNAKILADILGLLMPDLKD--------QDEDALNNMDSCIRISNSFLQEKEEITINSLW 377
Query: 300 DDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTA 359
+D++ + FYE + DL+ VP+ L + K N+ S E P + D+ L D
Sbjct: 378 EDDDQKKFYEDIIDLKDTVPSSFLTN-DKKQNKESEMSNENKPPPIDKLDEMDLDITD-- 434
Query: 360 EVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKE 419
++E +++ + +D + KG G
Sbjct: 435 ------------DNIEAIENEINENDFSQEDLNMSKGVG--------------------- 461
Query: 420 KDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRA 479
+DA + RLP +RD+IDQ ++FC+LNSK++R RL++
Sbjct: 462 -------------------IQIDAYITRLPELNNRDMIDQAAIDFCFLNSKASRNRLIKV 502
Query: 480 LFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLI--NKKDQMNIETKIR 537
L PR ++ PYYSR++ TLS M + +++ L ++F +I KD +E + R
Sbjct: 503 LCEPPRNRQDIFPYYSRLIVTLSKYMPTIRDSVVEYLIKQFKKIIALGTKD---LELRTR 559
Query: 538 NIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMA 597
N R++ EL KF P LVF C K +D F+ I+ C LLE CGRFL+R PET+ RM
Sbjct: 560 NSRYLSELIKFNAVPHHLVFHCFKLTIDKFSKQTIETLCILLEECGRFLFRHPETNPRMV 619
Query: 598 NMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDK 657
+LE +MR KN +NL + ++ENA+Y PPE+ K++ YIRKL++ DL+K
Sbjct: 620 ALLETIMRKKNAQNLGQQERLMIENAFYYVNPPEQPVIHHKIQSVEELYIRKLIYYDLNK 679
Query: 658 SSIEHVLRQLRKLPWSD--CESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAV 715
+ +L+QLRKL W + E+ LL F + L GLS YH EF + +
Sbjct: 680 KNYPRILKQLRKLHWENPEMENLLLNFFKTI-------------LIKGLSFYHHEFTIKL 726
Query: 716 VDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHG 772
VD +LE IR+GLE N+Y QR++A +R+LGELYNY+ +D+ VIFDTLY +++FGH
Sbjct: 727 VDSILELIRVGLEENNYKYNQRQIALIRYLGELYNYKIIDTPVIFDTLYTLVIFGHA 783
>gi|396488162|ref|XP_003842811.1| similar to nonsense-mediated mRNA decay factor (Upf2)
[Leptosphaeria maculans JN3]
gi|312219388|emb|CBX99332.1| similar to nonsense-mediated mRNA decay factor (Upf2)
[Leptosphaeria maculans JN3]
Length = 1201
Score = 316 bits (809), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 149/336 (44%), Positives = 226/336 (67%), Gaps = 3/336 (0%)
Query: 438 GTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRM 497
G +DALL RLP +++ +DQ ++FC+LNSK++R RL++A+ +P+ +LLP YSR+
Sbjct: 444 GAQVDALLARLPELSTKEAVDQTAMDFCFLNSKASRNRLIKAVQEIPKGRSDLLPLYSRL 503
Query: 498 VATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNI-ETKIRNIRFIGELCKFKIAPAGLV 556
+ATL+ M DVS L+ L++EF L +K + + + + +N+R++ EL KF + P ++
Sbjct: 504 IATLAKYMPDVSQGLVAHLDDEFRSLQRRKSKDFLGQVRTQNVRYLAELTKFGVVPEHVI 563
Query: 557 FSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRH 616
F CLK LDDF+ NI++ CNLLE CGR L R+PETS RMA+ LE L R K+ + + +
Sbjct: 564 FHCLKVSLDDFSRMNIEIICNLLENCGRHLLRNPETSPRMASFLETLQRKKSAQVIGQQE 623
Query: 617 VTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPW--SD 674
L+ENA Y PPER+A K R P+ ++RK+++ DL + +++ +RQ+RK+ W D
Sbjct: 624 RMLIENAVYYVNPPERAAIEQKDRTPIELFLRKIMYQDLTRRTLDKTVRQIRKMHWEEED 683
Query: 675 CESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGM 734
+ L K F K K KY IHL+A + + R+H EFA++V+D++LE I GLELND+
Sbjct: 684 IVNLLHKVFSKPGKIKYSNIHLLAVILGTILRHHQEFAISVIDDLLESITFGLELNDFKF 743
Query: 735 QQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
QRR+A +++LGELY Y VDS ++FDTLY +L +G
Sbjct: 744 NQRRIAEVKYLGELYIYRLVDSPLVFDTLYKLLNYG 779
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 68/142 (47%), Gaps = 3/142 (2%)
Query: 194 FKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYR 253
F+ Y+ V+ L + L +NA+ GE+ E+ S++EK K+ + L
Sbjct: 257 FRNILLRYFEDVKAHLLRDQKYLALQSRKNAEAYVKSGEVFEDRQSNFEKQMKAQERLVA 316
Query: 254 NVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASG---KDSSVPEPVWDDEETRAFYEC 310
N LA+A+ ++ P + E +G +G + S +W+DEE R FYE
Sbjct: 317 NAQVLADAMGVEMPDLKEKDGAANAGNGAIGLIKAGEYLRGQSDGAGIWEDEEERRFYEN 376
Query: 311 LPDLRAFVPAVLLGEAEHKANE 332
L DL+ VP +LL E + K ++
Sbjct: 377 LIDLKDRVPGILLEEVKKKKSD 398
>gi|449546767|gb|EMD37736.1| hypothetical protein CERSUDRAFT_114363 [Ceriporiopsis subvermispora
B]
Length = 1176
Score = 315 bits (807), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 159/335 (47%), Positives = 220/335 (65%), Gaps = 4/335 (1%)
Query: 441 LDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVAT 500
L ALL RLP +R +IDQ V+F +LNSK+ RKRLV+ + VP++ +LLP+YSR +A
Sbjct: 507 LTALLVRLPDATNRSMIDQAAVDFAFLNSKAARKRLVKFMSQVPKSRTDLLPHYSRFIAI 566
Query: 501 LSTCMKDVSSMLIQMLEEEFNFLINKKDQMN--IETKIRNIRFIGELCKFKIAPAGLVFS 558
L+ M DV S ++ ML+EEF +L KK+ + E + +N FI L KF + P ++
Sbjct: 567 LNRYMLDVGSEIVAMLDEEFRYLQRKKNVVKELAEVRTKNTAFISNLTKFGVVPPHVILH 626
Query: 559 CLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVT 618
K CLDDF+ N++ LLE CGRFL RS ET + ML+++ R +++++ D R +
Sbjct: 627 MYKVCLDDFSGTNVENLAQLLEGCGRFLLRSEETHEPFSKMLDLMRRKQSMQHFDQRQLL 686
Query: 619 LVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSD--CE 676
L+ENAYY C PPER+AR K R P+ +IR L++ L K +I+ VL+ LRKL W+D
Sbjct: 687 LLENAYYQCNPPERTARQEKERTPMELFIRHLIYDVLTKKTIDKVLKLLRKLDWNDPIVI 746
Query: 677 SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQ 736
L K F K K KYG I L+A LT L RYH FA+AVVD+VLE+IR GLE N Y + Q
Sbjct: 747 KNLHKVFTKPWKVKYGNIALLAMLTYDLQRYHPAFAIAVVDQVLEDIRRGLEQNVYSINQ 806
Query: 737 RRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
+R+A MR+LGELY Y + SS++FDTL+ ++ FGH
Sbjct: 807 QRVATMRYLGELYIYRLISSSIVFDTLWTLVTFGH 841
>gi|392569354|gb|EIW62527.1| ARM repeat-containing protein [Trametes versicolor FP-101664 SS1]
Length = 1148
Score = 315 bits (806), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 155/335 (46%), Positives = 218/335 (65%), Gaps = 4/335 (1%)
Query: 441 LDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVAT 500
L ALL RLP +R LIDQ V+F +LNSK+ RKRLV+ L +P++ +LLP+YSR++A
Sbjct: 499 LTALLARLPDATNRSLIDQAAVDFAFLNSKAARKRLVKFLGQIPKSRTDLLPHYSRLIAI 558
Query: 501 LSTCMKDVSSMLIQMLEEEFNFLINKKDQMN--IETKIRNIRFIGELCKFKIAPAGLVFS 558
L+ + DV ++ ML+EEF +L KK+ + E ++RN F+ L KF + P ++
Sbjct: 559 LARYLPDVGQDVVAMLDEEFRYLQRKKNVVKELAEVRLRNTTFLSNLTKFGVVPPHVILH 618
Query: 559 CLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVT 618
K CLDDF+ N++ LLE CGRFL RS +T + M+E++ R +++ +LD R +
Sbjct: 619 MFKVCLDDFSGTNVENLALLLEGCGRFLLRSEDTRVPFGKMIELMRRKQSMAHLDQRQLL 678
Query: 619 LVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSD--CE 676
L+ENAYY C PPER+AR K R P+ +IR L++ L K ++E VLR +R+L W+D
Sbjct: 679 LLENAYYQCNPPERTARQVKERTPMELFIRHLIYDVLTKKTVEKVLRLIRRLDWNDPVVL 738
Query: 677 SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQ 736
L K F K K KYGQI L+A L L RYH F++ VVD+V+E+IR GLE N Y M Q
Sbjct: 739 RTLHKVFTKPWKIKYGQIPLLAILAYDLQRYHPAFSIGVVDQVMEDIRRGLETNMYSMNQ 798
Query: 737 RRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
RR+A +FLGELY Y + S +IFDTL+ ++ FGH
Sbjct: 799 RRIASAKFLGELYIYRLISSGIIFDTLWTLVTFGH 833
>gi|154302179|ref|XP_001551500.1| hypothetical protein BC1G_09770 [Botryotinia fuckeliana B05.10]
Length = 1233
Score = 315 bits (806), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 162/404 (40%), Positives = 241/404 (59%), Gaps = 34/404 (8%)
Query: 403 EKDKEKAKDPDKEKGKEKDTERKV----------ETEKEKLKGVE----GTNLDALLQRL 448
E K+K D D++ GK+ DT + T+ ++ + G +DALL RL
Sbjct: 424 EDGKKKKTDTDEQVGKKVDTSEIIPAESTAPTAKTTDDDQSTAIANKTIGAQVDALLARL 483
Query: 449 PGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDV 508
P ++DLID+ ++FC+LNSK++R RL++A+ +P+ +LLP YSR+VATL M D+
Sbjct: 484 PDLTNKDLIDEAAIDFCFLNSKASRNRLIKAVQEIPKGRSDLLPSYSRLVATLGKYMPDI 543
Query: 509 SSMLIQMLEEEFNFLINKKDQMNI-ETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDF 567
L+ L++EF L +K++ + + ++ NIR++ EL KF + P ++F CLK LDDF
Sbjct: 544 IKGLVDHLDQEFRSLQRRKEKEFLGQARLGNIRYLAELTKFGVVPEHVIFHCLKVSLDDF 603
Query: 568 THHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLC 627
+ NI++ CNLLE CGR+L R+P+ S RM + LE L R K+V+++ + L+ENA Y
Sbjct: 604 SRMNIEIICNLLENCGRYLLRNPDMSPRMTSFLETLKRKKSVQHIGQQERMLIENAVYYV 663
Query: 628 KPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCESY--------- 678
PP R K R P+ +IRKL++SD+ + ++R +R+L W + E +
Sbjct: 664 DPPLRPTIQQKERTPIDLFIRKLVYSDMTTRNYARIIRSIRRLHWEESEVWAIFKLWTTF 723
Query: 679 ----------LLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLE 728
L K K K KYG I+L+A +T+ L RYH F + V+D VLE I +GLE
Sbjct: 724 TNNLSKVVTILEKVLSKPGKVKYGNIYLLAIVTSALFRYHQGFVITVIDNVLEYIIVGLE 783
Query: 729 LNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHG 772
ND+ QRR+A ++LGELYN+ VD VIFDT+Y IL FGHG
Sbjct: 784 QNDFKFNQRRIAEAKYLGELYNFRMVDHPVIFDTMYRILTFGHG 827
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 89/195 (45%), Gaps = 18/195 (9%)
Query: 194 FKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYR 253
F+ + Y+ V+ + + ++ + ++++ G+L E+ ++YEK K+ + L
Sbjct: 291 FRNILNRYFEDVKAHIIRDQKAIAKQARKDSEAYVKSGQLFEDRQANYEKALKAQERLVS 350
Query: 254 NVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASG---KDSSVPEPVWDDEETRAFYEC 310
N LAE++ + P + + ++ + +G +G + +W+DE+ R FYE
Sbjct: 351 NAQVLAESIGAEMPDLKDSDDSSALGNGGIGLVKAGDYLRGEGEGAGIWEDEDERRFYEN 410
Query: 311 LPDLRAFVPAVLLGEAEHKANE-----------PSVKPLEQ--PTDPASEPDQGQLAAQD 357
L DL+ VP +LL + + K + + P E PT ++ DQ A
Sbjct: 411 LVDLKGKVPGMLLEDGKKKKTDTDEQVGKKVDTSEIIPAESTAPTAKTTDDDQSTAIANK 470
Query: 358 T--AEVSADLGASPE 370
T A+V A L P+
Sbjct: 471 TIGAQVDALLARLPD 485
>gi|170097844|ref|XP_001880141.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644579|gb|EDR08828.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1031
Score = 310 bits (795), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 162/361 (44%), Positives = 232/361 (64%), Gaps = 7/361 (1%)
Query: 418 KEKDTERKVETEKEKLK-GVEGTN--LDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRK 474
+EKD RK T + +G + L ALL RLP +R LIDQ ++F +LNSK+ R+
Sbjct: 379 REKDEVRKATTPPLSPQLAPQGPSQLLTALLVRLPDATNRALIDQAAIDFAFLNSKAARR 438
Query: 475 RLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMN--I 532
RLV+ + VP+ +LLP+YSR++ATL+ M D+ + ++ L+EEF +L KK+ +
Sbjct: 439 RLVKFMSQVPKNRTDLLPHYSRLIATLNKYMPDIGTEVVATLDEEFRYLQRKKNVLKELA 498
Query: 533 ETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPET 592
E +++NI F+ L KF+I P ++ K CLDDF+ N++ LLE CGRFL RS +T
Sbjct: 499 EVRLKNIIFLSNLTKFRIVPPHVILHMFKVCLDDFSGTNVENIALLLEGCGRFLLRSEDT 558
Query: 593 SIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLF 652
S R MLE++ R +++++ D R + L+ENAYY C PPER+ R K+R P+ +IR L++
Sbjct: 559 SERFGTMLELMRRKQSMQHFDQRQLLLLENAYYQCNPPERAPRQEKLRTPMELFIRHLIY 618
Query: 653 SDLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDE 710
L K +I+ VL+ +RKL W + E L K F K K KYG I L+A LT L RY
Sbjct: 619 DVLAKRTIDKVLKLVRKLDWENDEVRRILHKVFTKSWKIKYGNISLLAMLTYDLQRYRPT 678
Query: 711 FAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
FA+AVVD+VLE++R GLE N Y QRR+A +++LGELY Y + S +IFDTL+ I+ FG
Sbjct: 679 FAIAVVDQVLEDVRRGLEQNIYSTNQRRVATVKYLGELYIYRLLSSGIIFDTLWSIVTFG 738
Query: 771 H 771
H
Sbjct: 739 H 739
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 134/294 (45%), Gaps = 30/294 (10%)
Query: 61 LKICSLLHQRY-KDFSPCLIDGLLKVFFPGKSG-------EDLDADRNLKAMKKRSTLKL 112
++I S LH+R+ K F+P + L P E + + N + +++R L++
Sbjct: 64 VEIISPLHRRFPKTFTPEFVSALSVAISPPSRASLTSIAPEQREKEDNARIIRQRPILRV 123
Query: 113 LLELYFIGIIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGLPLSG 171
EL +GII+DSS + +++ L D T ++L LL +F + R +LG+
Sbjct: 124 CSELALVGIIKDSSERSGAEWVMKAVKDLLSNDPTLSSLPLLTTFLKSYSRPYLGVVAPA 183
Query: 172 PGQEI----------------YEEFFKGLN--ITADQKKIFKKAFHTYYNAVQELLQAEH 213
++I + FK + + D + FK+ Y++ V + L EH
Sbjct: 184 THKQIPNNSNSPTDDEDAGGQFPPIFKEEDELVERDIRDRFKRMCEGYFDNVCKKLVIEH 243
Query: 214 TSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYRNVSSLAE---ALDMQPPVMP 270
L++ + N + GE+ E+ +YEK+ K Y+ L + SL+E P M
Sbjct: 244 KRLQEQDKRNHEAYIRSGEIFEDRQQAYEKMTKGYEKLLASCQSLSELLYLPLPSLPTMS 303
Query: 271 EDVHTTRVTSGEDASPASGKDSSVPEPVWDDEETRAFYECLPDLRAFVPAVLLG 324
+ + ++ + + + + W+DEE R F+E + DL+ FVP+ +LG
Sbjct: 304 QKSDSIQIGANSSSLLGDTDEVIITGGKWEDEEERRFFEDVQDLKDFVPSSVLG 357
>gi|299115409|emb|CBN74240.1| putative hUPF2 [Ectocarpus siliculosus]
Length = 1674
Score = 310 bits (795), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 150/332 (45%), Positives = 214/332 (64%), Gaps = 8/332 (2%)
Query: 448 LPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKD 507
LP C +++ +D+ +FCY+NSKS RK+LV ALFNVPR + +LLP Y+R+VA L MK
Sbjct: 878 LPNCHNQERVDEFAKKFCYVNSKSARKKLVAALFNVPRQARDLLPMYARLVAILDQAMKT 937
Query: 508 VSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDF 567
++ +LI+ L F + + KK I+ +I+N RFIGEL KF++AP + F CL++CLDDF
Sbjct: 938 IAPLLIEELRSHFRYFLRKKAPGQIDHRIKNARFIGELVKFRVAPPVVAFQCLRSCLDDF 997
Query: 568 THHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLC 627
+ + LLETCGRFL+R T R + L ++M++K+ KNLD R +V+NA+Y C
Sbjct: 998 SSLAVQTMAALLETCGRFLFRQKLTHQRTRSFLTVMMKVKSAKNLDKRLEAVVDNAFYTC 1057
Query: 628 KPPERSARVSKVRPPLHQYIRKLLFSDL--DKSSIEHVLRQLRKLPW----SDCESYLLK 681
PPER R +KVR PL Y+R L+ L D +E V++QLRKLPW +D ES +L+
Sbjct: 1058 CPPERQQRTAKVRTPLQLYVRHLMMDKLRDDPDVVEEVIKQLRKLPWQDPEADVESEVLR 1117
Query: 682 CFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLEL--NDYGMQQRRL 739
+++ + +Y IHL A + +GL+R+ D AV VD VLE + +EL G QR +
Sbjct: 1118 ASLRLCRSRYPCIHLAADVLSGLARHQDRVAVKAVDAVLEAMHRAIELPGGGGGESQRLV 1177
Query: 740 AHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
+ R LGELYNY V S IF+TL+L++ GH
Sbjct: 1178 GYARLLGELYNYAVVGSPTIFETLHLLVDSGH 1209
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 108/242 (44%), Gaps = 38/242 (15%)
Query: 63 ICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIGII 122
+C L+HQRY +F+ LI L F GE+ ++ L K+ S L+LL EL+ G+
Sbjct: 515 LCCLMHQRYAEFAEDLIPKLAAPFLSAPGGEEEREEKELLRRKR-SNLRLLTELHASGVF 573
Query: 123 EDSSIFINIIKDLTSIE---------------HLKDRDTT--------QTNLTLLASFAR 159
+ S + + I++ L +E D T + ++TLLA F R
Sbjct: 574 DGSRLIVRIVRSLCGLEGKDGKRQRPGPGDAARRPDHQTVTAAPPPLREADVTLLAGFVR 633
Query: 160 Q-GRIFLG---------LPLSGPGQEIYEEFFKGLNITADQKKIFKKAFHTYYNAVQELL 209
G +G L L+G ++ E + AD K + ++A+ L
Sbjct: 634 AAGEDMVGVLQRKTAGMLKLAGEMGKLEREPV----VDADVKGRLRSLVDGVFDALCSHL 689
Query: 210 QAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVM 269
+ H L ++E + K G L+EE + E+ RK Y+ L NV+SLA +L+ P +
Sbjct: 690 ERGHEQLGRLEKKMEKDRLTNGTLTEEKERNLEESRKGYEALLGNVTSLASSLNRDMPQL 749
Query: 270 PE 271
PE
Sbjct: 750 PE 751
>gi|452845663|gb|EME47596.1| hypothetical protein DOTSEDRAFT_69517 [Dothistroma septosporum
NZE10]
Length = 1144
Score = 310 bits (795), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 148/338 (43%), Positives = 225/338 (66%), Gaps = 3/338 (0%)
Query: 438 GTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRM 497
G +DALL RL +++ +DQ ++FC+LNSK++R RL++++ +P+ +LLP Y+R+
Sbjct: 464 GAQVDALLARLHELTTKEQVDQFAIDFCFLNSKASRNRLIKSIEEIPKGRTDLLPLYARL 523
Query: 498 VATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNI-ETKIRNIRFIGELCKFKIAPAGLV 556
VATL ++DV +I L++EF L +K + + + ++ NIR+I EL KF + P ++
Sbjct: 524 VATLGRYLQDVPQAMISYLDDEFRSLQRRKSKDFLGQVRMVNIRYIAELTKFGVVPEHVI 583
Query: 557 FSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRH 616
F CLK LDDF+ NI+V NLLE CGR+L R+P+TS RM + LE L R K ++L +
Sbjct: 584 FHCLKVSLDDFSRMNIEVIANLLENCGRYLLRNPDTSPRMTSFLETLQRKKAAQHLGQQE 643
Query: 617 VTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE 676
L+ENA Y PPER+A K R L Y+RKL++ DL K +++ V++Q+RKL W + E
Sbjct: 644 RMLIENAAYYVNPPERAAIQQKERTTLDLYVRKLVYVDLSKKTLDKVIKQIRKLHWEESE 703
Query: 677 --SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGM 734
L K F+K K ++G I+L+A + A L R+H F++ V+DE+LE I +GLE+ND+
Sbjct: 704 VVDILRKIFVKPGKIRFGNIYLLAMMLAALYRFHPSFSITVLDELLERITVGLEVNDFKY 763
Query: 735 QQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHG 772
QRR+A +++LGELY Y VDS ++FD LY +L +GH
Sbjct: 764 NQRRIAEVKYLGELYMYRIVDSQLVFDMLYRLLNYGHA 801
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 74/161 (45%), Gaps = 6/161 (3%)
Query: 194 FKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYR 253
F+ Y+ V+ + + L NA+ GE+ E+ ++YEK K+ + L
Sbjct: 288 FQNILLRYFEDVKSHIVRDQERLTIQGKRNAEAYVKSGEVFEDRQTNYEKAIKAQEKLVT 347
Query: 254 NVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASG---KDSSVPEPVWDDEETRAFYEC 310
+ +L+E L + P + E + + G +G + + +W+DE+ R FYE
Sbjct: 348 SAQTLSEVLGAEMPDLSEKNNNSGGFEGSIGLVKTGEYLRGQAEGAGIWEDEDERRFYEN 407
Query: 311 LPDLRAFVPAVLLGEAEHKA---NEPSVKPLEQPTDPASEP 348
L DL+ VP +LL + + K +E K L++ D +P
Sbjct: 408 LVDLKDRVPGILLEDGKKKKIENDEQVGKKLDEAADVKEKP 448
>gi|403413169|emb|CCL99869.1| predicted protein [Fibroporia radiculosa]
Length = 2097
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 153/327 (46%), Positives = 215/327 (65%), Gaps = 4/327 (1%)
Query: 449 PGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDV 508
P +R LIDQ V+F +LNSK+ RKRLV+ + P+ +LLP+YSR+VA L+ M D+
Sbjct: 505 PDATNRALIDQAAVDFAFLNSKAARKRLVKFMSQTPKNRTDLLPHYSRLVAILNKYMPDI 564
Query: 509 SSMLIQMLEEEFNFLINKKDQMN--IETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDD 566
S ++ +L+EEF +L KK +N E +++NI F+ L KF++ P L+ LK CLDD
Sbjct: 565 GSEVVSVLDEEFRYLQRKKKVVNELAEVRLKNITFLSNLTKFRVVPPHLILHMLKVCLDD 624
Query: 567 FTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYL 626
F+ N+D LLE CGRFL RS ET+ + MLE++ R +++++ D R L+ENAYY
Sbjct: 625 FSGTNVDNVALLLEGCGRFLLRSAETNEPFSKMLELMRRKQSLQHFDQRQQLLLENAYYQ 684
Query: 627 CKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFM 684
C PPER+AR K R P+ +IR L++ L + +I+ VL+ +RKL W+D L K F
Sbjct: 685 CNPPERAARHEKERTPMELFIRHLIYDVLTRKTIDKVLKLIRKLDWNDSTVLRTLHKVFT 744
Query: 685 KVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRF 744
K K KYG + L+A LT L RYH FA+AVVD+VLE+IR GLE N Y + QRR+A +++
Sbjct: 745 KPWKVKYGNVPLLAMLTYDLQRYHPAFAIAVVDQVLEDIRRGLEQNAYRINQRRVATVKY 804
Query: 745 LGELYNYEHVDSSVIFDTLYLILVFGH 771
LGELY Y + S +IFDTL+ + FGH
Sbjct: 805 LGELYIYRLISSGIIFDTLWTFVTFGH 831
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 135/307 (43%), Gaps = 50/307 (16%)
Query: 62 KICSLLHQRY-KDFSPCLIDGLLKVFFP-------GKSGEDLDADRNLKAMKKRSTLKLL 113
+I SLLH+R+ K F+P LI L P + E + + + ++R +++
Sbjct: 106 EIISLLHRRFPKTFTPSLISSLSVAMAPPSRAVLSAMNPEQREKEETARVSRQRPVIRVC 165
Query: 114 LELYFIGIIED------SSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLG 166
EL +GII+D + +KD+ S D +L LL++F + R +LG
Sbjct: 166 AELALVGIIKDGPDRSGGEWIMKAMKDVLS------NDPNLYSLPLLSTFLKSFARPYLG 219
Query: 167 LPLSGPGQEIYEEFFKGL-----------NITAD------------QKKI---FKKAFHT 200
L ++I G ++ D +K++ FKK
Sbjct: 220 LVPPSSAKQISTSSEPGTLSATTTGEANADVNGDFPTPVTEADELVEKEVRDRFKKMCEG 279
Query: 201 YYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYRNVSSLAE 260
Y++ V + L EH L++ + N + GE+ E+ +YEK+ KSY+ L + +L+E
Sbjct: 280 YFDNVSKKLVNEHNRLQEQDRRNHEAYIRSGEIFEDRQQAYEKMTKSYEKLLASCQTLSE 339
Query: 261 ALDMQPP---VMPEDVHTTRVTSGEDASPASGKDSSVPEPVWDDEETRAFYECLPDLRAF 317
L + P M + + + + + SV W+DEE R F+E +PDL+ +
Sbjct: 340 LLYVPMPSLKTMTQKSESILIGTNTGLNTVGADAESVVGGKWEDEEERRFFEDVPDLKDY 399
Query: 318 VPAVLLG 324
VP +LG
Sbjct: 400 VPRSVLG 406
>gi|340513985|gb|EGR44257.1| predicted protein [Trichoderma reesei QM6a]
Length = 1117
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 165/384 (42%), Positives = 244/384 (63%), Gaps = 7/384 (1%)
Query: 394 EKGKGKDKEEKDKEKAKDPDK--EKGKEKDTERKVETEKEKLKG-VEGTNLDALLQRLPG 450
E GK K K+E +++ AK P+ E + ++ + + G +DALL RLP
Sbjct: 410 EDGK-KKKQETEEQNAKKPESSTEGAEAAKAPEPIDDQSMAIANKTIGAQVDALLARLPD 468
Query: 451 CVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSS 510
++++IDQ ++FC+LNSK++R RLV+AL VP+ +LLP ++R+VATL M DV
Sbjct: 469 LTNKEIIDQTAIDFCFLNSKASRNRLVKALTEVPKGRSDLLPSWARLVATLGRYMPDVPK 528
Query: 511 MLIQMLEEEFNFLINKKDQMNI-ETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTH 569
L+ L+ EF L +K++ + + ++ NIR++ EL KF + P +VF CLK LDDF+
Sbjct: 529 GLVDYLDAEFRSLQRRKEKDFLGQVRLSNIRYLAELTKFGVVPEHVVFHCLKVSLDDFSR 588
Query: 570 HNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKP 629
NI++ CNL+E CGR+L R+PET+ RMA+ LE L R K+V+++ L++NA Y P
Sbjct: 589 MNIEILCNLIENCGRYLLRNPETAPRMASFLETLQRKKSVQHIGQPERMLIDNAVYFVDP 648
Query: 630 PERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVH 687
PER A K R P+ +IRKL++ D+ K + +L+Q+R+L W + E + L K F K
Sbjct: 649 PERPAIEQKERTPMELFIRKLIYGDMTKRNYSKILKQIRRLHWEEAEVVAILEKVFSKPG 708
Query: 688 KGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGE 747
K KYG IHL+ L + L R+H F V VVD V+E I GLE ND+ QRR+A +++LGE
Sbjct: 709 KVKYGNIHLLGILLSALYRHHPHFVVRVVDNVVESICFGLEQNDFRFSQRRVAEVKYLGE 768
Query: 748 LYNYEHVDSSVIFDTLYLILVFGH 771
LYNY ++ VIFDT+Y IL+FG+
Sbjct: 769 LYNYRMLEHPVIFDTMYKILLFGY 792
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 150/379 (39%), Gaps = 72/379 (18%)
Query: 61 LKICSLLHQRYKDFSPC-LIDGLLKVFFPGKSGEDLDADRNLKA-----------MKKRS 108
++I S LHQR F P + L + G + D + L A ++R+
Sbjct: 93 VEIVSALHQR---FGPAEFTEYLTWLLGKGMATPDKSVLKTLAAEVREKEEKERITRQRA 149
Query: 109 TLKLLLELYFIGII---EDSSIFINIIKDLTS---------------------IEHLKD- 143
L+++ EL+ +G++ +D++ + K T +E LKD
Sbjct: 150 LLRVITELWLVGVLRTLDDATKPDDATKGATGKSVELKTRSNSKPGASADPFPLEVLKDL 209
Query: 144 --RDTTQTNLTLLASFARQ-GRIFLGLPLSGP-------------GQEIYEEFFKGLNIT 187
D NL LL F + LG+ + P +E E + T
Sbjct: 210 LGHDREHANLPLLVIFVKAFSWDILGVRTTTPESRKSGEDEASSTPEETAESSVEDQPFT 269
Query: 188 ADQ-KKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRK 246
+ + FK+ Y++ V + + S+ NA+ GE+ E+ ++YEK K
Sbjct: 270 PPELAEKFKEVLKKYFDDVANHIVRDQKSIHSQARRNAEAYVKSGEVFEDRQANYEKQVK 329
Query: 247 SYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASG---KDSSVPEPVWDDEE 303
+ D L N +A+ + + P + + ++ +G + + +W+DE+
Sbjct: 330 AQDRLVANAQVIADVIGAEMPNLKDSNDPLAASNSTIGLVKTGDYLRSMADGAGIWEDED 389
Query: 304 TRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDP--------ASEP--DQGQL 353
R FYE L DL+ VPA+LL + + K E + ++P A EP DQ
Sbjct: 390 ERRFYENLVDLKGKVPAILLEDGKKKKQETEEQNAKKPESSTEGAEAAKAPEPIDDQSMA 449
Query: 354 AAQDT--AEVSADLGASPE 370
A T A+V A L P+
Sbjct: 450 IANKTIGAQVDALLARLPD 468
>gi|449300424|gb|EMC96436.1| hypothetical protein BAUCODRAFT_69588 [Baudoinia compniacensis UAMH
10762]
Length = 1202
Score = 308 bits (788), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 162/393 (41%), Positives = 245/393 (62%), Gaps = 12/393 (3%)
Query: 382 EKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEKDTERKVETEKEKLKGVEGTNL 441
E ++K D++ GK D + AKD E D V K G +
Sbjct: 427 EDGRKKKTGADEQVGKKTD----ETSDAKDATVAHSAEMDDTSTVIVNK-----TVGAQV 477
Query: 442 DALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATL 501
DALL RL +D +DQ ++FC+LNSK++R RL++A+ +P+ +LLP Y R++A+L
Sbjct: 478 DALLARLHEFQGKDQVDQFAIDFCFLNSKASRNRLIKAIEEIPKGRTDLLPLYGRLIASL 537
Query: 502 STCMKDVSSMLIQMLEEEFNFLINKKDQMNI-ETKIRNIRFIGELCKFKIAPAGLVFSCL 560
+ DV +I L++EF L +K + + + ++ N+R+I EL KF + P ++F CL
Sbjct: 538 GRYLIDVPQAIITYLDDEFRSLQRRKSKDFLGQVRMVNVRYIAELTKFGVVPEHVIFHCL 597
Query: 561 KACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLV 620
K CLDDF+ NI++ LLE+CGR+L R+PETS RM++ LE L R K ++L + L+
Sbjct: 598 KVCLDDFSRMNIEIIATLLESCGRYLLRNPETSPRMSSFLETLQRKKGAQHLGQQERMLI 657
Query: 621 ENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPW--SDCESY 678
ENA Y PPER+A K R PL ++R+L++ DL+K ++E V++Q+R+L W S+ +
Sbjct: 658 ENAMYYVNPPERAAIQQKERTPLELFVRQLVYVDLNKKTLERVIKQIRRLHWEESEVQEA 717
Query: 679 LLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRR 738
L K F+K K KY I+L+A + A L ++H +FA++V+DE+LE I +GLE ND+ QRR
Sbjct: 718 LRKIFVKPGKIKYSNIYLLALMLAALWKFHTDFAISVIDELLERITVGLETNDFKYNQRR 777
Query: 739 LAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
+A +R+LGELY Y VD+ +I DTLY IL +GH
Sbjct: 778 IAEVRYLGELYTYRLVDTVIIMDTLYKILNYGH 810
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 76/164 (46%), Gaps = 6/164 (3%)
Query: 186 ITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLR 245
IT + ++ F+ Y++ V+ L + L NA+ GE+ E+ ++YEK
Sbjct: 286 ITPELQQRFRNVLLRYFDDVKTHLVRDQKQLTAQGKRNAEAYVKSGEVFEDRQANYEKAV 345
Query: 246 KSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASG---KDSSVPEPVWDDE 302
K+ + L + +LAE L P + E ++ +G + + +W+DE
Sbjct: 346 KAQEKLVGSAQTLAEVLGADMPDLAEKDTSSAAFESSIGLVKTGDYLRGQAEGAGIWEDE 405
Query: 303 ETRAFYECLPDLRAFVPAVLLGEAEHK---ANEPSVKPLEQPTD 343
E R FYE L DL+ VP +LL + K A+E K ++ +D
Sbjct: 406 EERRFYETLTDLKDRVPGILLEDGRKKKTGADEQVGKKTDETSD 449
>gi|328766629|gb|EGF76682.1| hypothetical protein BATDEDRAFT_14596 [Batrachochytrium
dendrobatidis JAM81]
Length = 1082
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 160/385 (41%), Positives = 242/385 (62%), Gaps = 14/385 (3%)
Query: 397 KGKDKEEKDKEKAKDPDKEKGKEKDTERKVETEKEKLKGVEGTNLDALL----QRLPGCV 452
+ KD + + +K D +++D T + + K VE + +A L R+ V
Sbjct: 341 RPKDDKPSEDTVSKSDDNAPTEDQDNPISPTTHEHEEKKVESASFNATLITIFSRMLNAV 400
Query: 453 SRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSML 512
+++ IDQ+ VEF + N++ +R+++V L + L+L+PYYSR++ATL+ M D+ + L
Sbjct: 401 NKETIDQIAVEFAFQNNRGSRRKMVETLLALSYQRLDLIPYYSRLIATLNPYMPDIGTGL 460
Query: 513 IQMLEEEFNFLINKKDQMNIETKIRN----IRFIGELCKFKIAPAGLVFSCLKACLDDFT 568
+M F+ +K+QM I+ KI+ IR+IGEL KF+I P +VF +K LDDF
Sbjct: 461 NRM----FHAQQKRKEQMFIDKKIKACNHVIRYIGELTKFRITPLHVVFHVIKVLLDDFM 516
Query: 569 HHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCK 628
HHN+D+ C LL+ CGRFL+R P+T+ + A+ +EI+ R K +NLD RH+ +++NA + C
Sbjct: 517 HHNVDLLCALLDNCGRFLFRHPDTNAQTADFIEIMQRKKISQNLDSRHIFMIDNAIHECN 576
Query: 629 PPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSD--CESYLLKCFMKV 686
PP+ A K R P+ QY+RKL++ DLD SS +L QLRK WSD + + K F K+
Sbjct: 577 PPDTVAFTIKQREPMVQYLRKLIYYDLDLSSARSILVQLRKANWSDPLVLATMRKLFTKI 636
Query: 687 HKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLG 746
K K+ + L+A L++ LSRY+ EF VA+VD LE+IR LE N + QRR++ +FLG
Sbjct: 637 WKIKFSNLGLMAFLSSELSRYYPEFGVAIVDSCLEDIRCSLEENIFKHNQRRISTAKFLG 696
Query: 747 ELYNYEHVDSSVIFDTLYLILVFGH 771
L+ Y VDS+VIF+TLYL+L FGH
Sbjct: 697 HLHTYRMVDSNVIFETLYLLLRFGH 721
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 151/325 (46%), Gaps = 37/325 (11%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFP-----GKSGEDLDADRNLKAMKKRSTLKLLLE 115
++I SL+HQRY FSP L+ LK F P G + E + D ++ ++RS+L+ + E
Sbjct: 62 VEISSLIHQRYAAFSPLLLANTLKHFGPPPSFVGVATEQRERDETVRVHRQRSSLRFISE 121
Query: 116 LYFIGIIED-----SSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQGRIFLGLPLS 170
LY +GI +D + NI+ ++ +D T N+++ +F + F + +
Sbjct: 122 LYLVGIAQDPPKSKDGLIGNILFEMACF-----KDKTHLNISICVAFVK----FFSICII 172
Query: 171 GPGQEIYEEFFKGLN------------ITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQ 218
EE N I + + K ++Y+++ L +H +++
Sbjct: 173 DSKHLQSEETADQDNHDQSTTMILDSLIPSHYRTSISKILNSYFDSAAFHLIRDHQHVKR 232
Query: 219 MENENAKILNAKGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRV 278
+E + A+GE+ E+ +Y+K K Y L +V +L+ L P + ED R
Sbjct: 233 LEKITSDCFIARGEIYEDKQDAYDKTVKVYQKLRTSVETLSTYLKRDMPELAEDDDAAR- 291
Query: 279 TSGEDASPASGK---DSSVPEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSV 335
SG + + GK D +W+DEE++ FY+ + DL+ VPA+LLG K ++PS
Sbjct: 292 -SGMNIIMSGGKSIRDEKFKTGIWEDEESKLFYDNILDLKNQVPAILLG-IRPKDDKPSE 349
Query: 336 KPLEQPTDPASEPDQGQLAAQDTAE 360
+ + D A DQ + T E
Sbjct: 350 DTVSKSDDNAPTEDQDNPISPTTHE 374
>gi|358055906|dbj|GAA98251.1| hypothetical protein E5Q_04934 [Mixia osmundae IAM 14324]
Length = 1049
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 154/366 (42%), Positives = 232/366 (63%), Gaps = 2/366 (0%)
Query: 408 KAKDPDKEKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYL 467
++ D +E+ ++ E + T E L L ALL RLP S + ID+ VEF L
Sbjct: 388 RSDDLTEEELQKDYVEPSLGTADEPLPAGPSAQLTALLARLPEMSSVETIDRAAVEFAGL 447
Query: 468 NSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKK 527
NSK+ R RLV+ALF+ R L+L+P+YSR+VATL+ M DV + L+ +L++EF +L +K
Sbjct: 448 NSKAARNRLVKALFSFNRKRLDLIPFYSRLVATLNVYMPDVGANLLSLLDDEFRYLAKRK 507
Query: 528 DQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLY 587
+ E +++ +R+I EL KF + P + K CLDDF HNID C LLE+CGR+L
Sbjct: 508 NIELTEMRLKTLRYISELTKFGVTPLHSILHYYKVCLDDFARHNIDNICILLESCGRYLL 567
Query: 588 RSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYI 647
RS ++ R +L++ R K+V+NLD R + ++++AYY C PPER+A K R + +I
Sbjct: 568 RSEDSRERFKPLLDVFKRKKSVQNLDQRQIAMLDSAYYQCDPPERAAIEHKQRSDMELFI 627
Query: 648 RKLLFSDLDKSSIEHVLRQLRKLPWSD--CESYLLKCFMKVHKGKYGQIHLIASLTAGLS 705
R L+++ L + ++E VL+ LRKL W+D + F K+ K K+ QI L+A L +S
Sbjct: 628 RYLMYNLLGRHTLEKVLKLLRKLDWNDELVHRKIFNTFTKIWKVKFSQISLVAVLLYDMS 687
Query: 706 RYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYL 765
++H EF ++V+D+VLE RLGL+ N + Q+R+A +++LGELY Y VDS VIFD L+
Sbjct: 688 KFHAEFTISVIDQVLENFRLGLDQNSFKQNQQRIATVKYLGELYVYRVVDSRVIFDVLWS 747
Query: 766 ILVFGH 771
++ FGH
Sbjct: 748 LVTFGH 753
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 135/301 (44%), Gaps = 41/301 (13%)
Query: 102 KAMKKRSTLKLLLELYFIGII------EDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLA 155
+ +++RS L++L EL ++G+I + + +DL + D+D ++ L
Sbjct: 149 RVIRQRSLLRVLGELEYVGVIRPDKAGQVGDVLFAAFRDLLT----ADKDALVASIPLAV 204
Query: 156 SFARQ-GRIFLGLPLSGPGQEIYEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHT 214
SFA+ ++L + P ++ G + +K F++ YY+A+ + EHT
Sbjct: 205 SFAKHLSPLYLS---TAPEED------AGSVVQPAEKAKFRQLLSAYYDALSKRSVKEHT 255
Query: 215 SLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVH 274
L Q + N GE+ E+ + YEKL ++++ L+ V SL+E L + +
Sbjct: 256 HLLQTDQRNHDAYIRSGEIFEDRAQVYEKLSRNWEKLWAGVQSLSETLALP-LPTLPPLP 314
Query: 275 TTRVTSGEDASPASGKDSSVPE---PVWDDEETRAFYECLPDLRAFVPAVLLGEAEH--K 329
+ + G S + + V E VW DEE + FY L DL VPA LLG A+ K
Sbjct: 315 SAVIPGGSLISDGTARTEGVYETSGSVWLDEEEKRFYVDLLDLSLEVPASLLGVAKEDTK 374
Query: 330 ANEPSVKPLEQPTDPAS-----------EPDQGQ----LAAQDTAEVSADLGASPEGKSV 374
+ ++ ++ P EP G L A +A+++A L PE SV
Sbjct: 375 PDTTTLPDIDAPVRSDDLTEEELQKDYVEPSLGTADEPLPAGPSAQLTALLARLPEMSSV 434
Query: 375 E 375
E
Sbjct: 435 E 435
>gi|224000699|ref|XP_002290022.1| hypothetical protein THAPSDRAFT_262352 [Thalassiosira pseudonana
CCMP1335]
gi|220975230|gb|EED93559.1| hypothetical protein THAPSDRAFT_262352 [Thalassiosira pseudonana
CCMP1335]
Length = 1155
Score = 306 bits (785), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 226/736 (30%), Positives = 353/736 (47%), Gaps = 66/736 (8%)
Query: 63 ICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIGII 122
+C +H+RY FS LI LL +G D + +R L+LL E GII
Sbjct: 68 LCVEMHRRYSGFSAVLIPSLLAGVTGNNNGGSSGGDGETTCLPRRICLRLLTEFILHGII 127
Query: 123 EDSSIFINIIKDL----TSIEHLKDRDTTQTNLTLLASFARQGRI-FLGLPLSGPGQEIY 177
D I+ + +S E D++ T+ + +FA+ G + LG+ + +
Sbjct: 128 TDVKPIAKIVAEAAGAPSSSETNSDKEYVVTDANAVVTFAKTGGMEILGV-VPRTATSVM 186
Query: 178 EEFFKGLNITADQKKIFKKAFHTY----YNAVQELLQAEHTSLRQMENENAKILNAKGEL 233
E F H + Y + A H L ++E + +G L
Sbjct: 187 ESFKATTPYARAVPPPVITTLHAHCMGAYRTLSHSYLATHRRLIKLEKRCEQDRLLQGNL 246
Query: 234 SEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPE---------DVHTTRVTSGEDA 284
SE + + D L ++V +L++ALD+ PP++P D + + +
Sbjct: 247 SEAREKGLKDAQNLLDSLKKSVETLSDALDVDPPMLPTEEENATETTDGKGIELWTKNEN 306
Query: 285 SPASGKDSSVPEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDP 344
P + + P +DDEETRAFY +PD A P LLG P
Sbjct: 307 DPTDEERDARLGP-FDDEETRAFYCDVPDFLATKPPALLG-----------------VSP 348
Query: 345 ASEPDQGQLAAQDTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEK 404
A Q + A+ G G+ E + E + A D E+ +G D E+
Sbjct: 349 ADLEKQKERNARQ-------YGGLTGGEESELAAMEVEVVESLAHDDVMEEMEGADGEDV 401
Query: 405 DKEKAKDPDKEKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEF 464
E+ D KG E + + +T KL + L Q LP R+ ID+L F
Sbjct: 402 VMEEGGD---AKGDE-NGKAMSDTPHYKL-------MVLLEQELPEASRRETIDELADRF 450
Query: 465 C--YLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNF 522
C + ++K +RKRL + LF VPRT L+LLPYYSR A + D S L+ LE++ +
Sbjct: 451 CVNHGSNKISRKRLYKTLFLVPRTRLDLLPYYSRFAAIMDHVYSD--STLVTELEQQMHG 508
Query: 523 LINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETC 582
K NIE+++R R++ EL KF++AP ++ +K CL+DF +NIDVAC +LE+C
Sbjct: 509 QARFKKNQNIESRLRTARYLSELTKFRVAPPIVILRGIKRCLEDFNGYNIDVACCMLESC 568
Query: 583 GRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPP 642
GR+L+R T +++ +++ +MR+K +NLD RHV ++ +A+++ PP +S+R +K PP
Sbjct: 569 GRYLFRMKHTHKKLSELMDTMMRIKKARNLDERHVAMITSAFFMVNPPPQSSRPTKEVPP 628
Query: 643 LHQYIRKLLFSDL--DKSSIEHVLRQLRKLPWS----DCESYLLKCFMKV-HKGKYGQIH 695
L Y+R LL S L D S+ V +Q++++PWS DC + + K +K KG+Y
Sbjct: 629 LESYLRYLLMSRLEADDKSVSFVSKQIQRMPWSDPSLDCGALVCKYMLKACRKGRYKATK 688
Query: 696 LIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVD 755
IASL A L R E +D+VLE+I+ +E + QR + R GELY +
Sbjct: 689 AIASLAANLKRTKPEVPARFIDDVLEDIQWFMEHPQFRDHQRTIVGARVFGELYCASAIP 748
Query: 756 SSVIFDTLYLILVFGH 771
+S +F+ ++ IL FGH
Sbjct: 749 ASTVFEVMHHILNFGH 764
>gi|242023392|ref|XP_002432118.1| regulator of nonsense transcripts, putative [Pediculus humanus
corporis]
gi|212517492|gb|EEB19380.1| regulator of nonsense transcripts, putative [Pediculus humanus
corporis]
Length = 1166
Score = 305 bits (782), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 159/360 (44%), Positives = 233/360 (64%), Gaps = 9/360 (2%)
Query: 419 EKDTERKVETEKEKLKGVEGTN----LDALLQRLPGCVSRDLIDQLTVEFCY-LNSKSNR 473
E D E+K ETE E ++ V T + L LP C +RD +D + +EF LN+K N+
Sbjct: 438 ETDEEKKPETEHE-VEAVTDTKTKYIFNDFLFHLPSCCNRDTVDNMAIEFVLNLNTKHNQ 496
Query: 474 KRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIE 533
K+L + LF V RT L+LLP+YSR+VAT+ DV++ L QML+++F + + KKDQ+NIE
Sbjct: 497 KKLAKHLFGVNRTRLDLLPFYSRLVATIHLVAPDVATDLCQMLKQDFLYHVQKKDQINIE 556
Query: 534 TKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHN-IDVACNLLETCGRFLYRSPET 592
+KI+ +RFIGEL KFK+ C+K L DF+HH+ I++ CNL ETCGRFL+ PE+
Sbjct: 557 SKIKVVRFIGELIKFKMYSKLEGLFCIKILLQDFSHHHHIEMVCNLFETCGRFLFNHPES 616
Query: 593 SIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLF 652
R LE +MR K+V LD R+ T+ ENA+Y P E V K RPP+H++IR++L+
Sbjct: 617 RQRTKVYLEQMMRKKSVMALDSRYATMTENAFYAVIPREGGQTVKKERPPIHEFIRQILY 676
Query: 653 SDLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDE 710
+L + ++ V++ L K+ W+D E +Y++KC + KY I +A L A +SR++++
Sbjct: 677 HELSRQNVSMVIKLLHKVDWNDPELSAYVVKCLVNAWNVKYFNIKTLAGLVADISRHYEK 736
Query: 711 FAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
+ VVD VLE+IRLGLE+ + QRR+A +++LGELY Y DSS I LYL++ G
Sbjct: 737 IQIEVVDGVLEDIRLGLEVMEPKYNQRRIAMVKYLGELYYYRMADSSDILKVLYLLISLG 796
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 130/276 (47%), Gaps = 18/276 (6%)
Query: 62 KICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIGI 121
++C LH+ Y DF L++ K KS E + + +K + LKL EL +G+
Sbjct: 151 ELCCALHRLYADFENALMECWKKSL-TIKSDEPVSNN-----LKYKIDLKLYAELVLLGL 204
Query: 122 --IEDSSIFINIIKDLT-SIEHLKDRDTTQTNLTLLASFARQ-GRIFLGLPLSGPGQEIY 177
+ S + ++ + S+ H + D + N++ + SF R G ++ GL + E
Sbjct: 205 WAVPPPSRGLQLLGSIILSLVHNQKEDFS--NISAILSFLRSFGDVYAGL-IPREMAEAS 261
Query: 178 EEFFKGLN----ITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGEL 233
++F + I +++ K ++ F YY++ + L H L++ E + IL KGEL
Sbjct: 262 KKFNISIPSMTIIPSEKHKTVRQVFQDYYDSFCKHLIKNHNELQKFETHSRSILQTKGEL 321
Query: 234 SEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASGKDSS 293
S + Y L Y L +E L+ PV+P + T T+ D S D
Sbjct: 322 STNRKAEYNDLLTEYKKLLDYARQFSEILNAPMPVLPIEEVTKSETTVIDELLLS-HDER 380
Query: 294 VPEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHK 329
P +W+DEET+ FYECLPDL F+P + + + K
Sbjct: 381 FPLGIWEDEETQRFYECLPDLHVFLPQLPIDAPKQK 416
>gi|320593073|gb|EFX05482.1| nonsense-mediated mRNA decay factor [Grosmannia clavigera kw1407]
Length = 1178
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 162/392 (41%), Positives = 232/392 (59%), Gaps = 14/392 (3%)
Query: 382 EKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEKDTERKVETEKEKLKGVEGTNL 441
E K+K D D++ GK D E +P K T E + G +
Sbjct: 439 EDVKKKKTDTDEQVGKKADPSE-----GPEPPKPADSAGTTVSTDELSTSIVNKSIGAQV 493
Query: 442 DALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATL 501
D LL RLP ++D+IDQ ++FC+LNSK++R RLV+AL VP+ +LLP ++R+VATL
Sbjct: 494 DTLLLRLPDLTNKDVIDQTAIDFCFLNSKASRNRLVKALTEVPKGRSDLLPCWARLVATL 553
Query: 502 STCMKDVSSMLIQMLEEEFNFLINKKDQMNI-ETKIRNIRFIGELCKFKIAPAGLVFSCL 560
M D+ L++ L+ EF L +K++ + + ++ NIR++ EL KF I P +VF CL
Sbjct: 554 GRYMPDIPRGLVEHLDAEFRSLQRRKEKDFLGQVRLSNIRYLAELTKFGIVPEHVVFHCL 613
Query: 561 KACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLV 620
K LDDF+ NI++ NLLE CGR+L RSPETS RM + LE L R K ++++ L+
Sbjct: 614 KISLDDFSRMNIEIISNLLENCGRYLLRSPETSPRMVSFLETLQRKKTMQHIGQTERMLI 673
Query: 621 ENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCESYLL 680
ENA Y PPER A K R P+ +IRKLL+ DL K + +LRQ+ +L L
Sbjct: 674 ENAIYYVDPPERPAIQQKERTPMELFIRKLLYVDLSKRNANKILRQVVEL--------LR 725
Query: 681 KCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLA 740
K F + K KYG +HL+A L + L R+H F + +VD ++E + GLE ND+ QRRLA
Sbjct: 726 KAFSRPWKVKYGNVHLLAGLLSALYRHHSAFVINIVDGIIESVIFGLEQNDFRQNQRRLA 785
Query: 741 HMRFLGELYNYEHVDSSVIFDTLYLILVFGHG 772
+++LGE Y Y +++ VIFD +Y IL G+G
Sbjct: 786 EVKYLGEFYTYRLLENPVIFDMMYKILTLGYG 817
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 89/194 (45%), Gaps = 23/194 (11%)
Query: 194 FKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYR 253
FK Y++ V+ L + ++ NA+ GE+ E+ S++EK K+ + L
Sbjct: 306 FKSILSRYFDDVKGHLVRDQKAISNQSRRNAEAYVKSGEVFEDRQSNFEKQVKAQERLVA 365
Query: 254 NVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASG------------KDSSVPEPVWDD 301
N +A+ + + MPE + GED A+G +D +W+D
Sbjct: 366 NAQVIADVIGAE---MPE------LKDGEDGPSATGGSIGIVKAGDYLRDQGEGAGIWED 416
Query: 302 EETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTAEV 361
EE R FYE L DL+ VPA+LL + + K + + + + + DP+ P+ + A V
Sbjct: 417 EEERRFYENLVDLKGKVPAILLEDVKKKKTD-TDEQVGKKADPSEGPEPPKPADSAGTTV 475
Query: 362 SAD-LGASPEGKSV 374
S D L S KS+
Sbjct: 476 STDELSTSIVNKSI 489
>gi|302681667|ref|XP_003030515.1| hypothetical protein SCHCODRAFT_77596 [Schizophyllum commune H4-8]
gi|300104206|gb|EFI95612.1| hypothetical protein SCHCODRAFT_77596 [Schizophyllum commune H4-8]
Length = 629
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 151/335 (45%), Positives = 220/335 (65%), Gaps = 4/335 (1%)
Query: 441 LDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVAT 500
L ALL RL +R +IDQ ++F +LN+K+ RKRLV+ L VP+ +LLP+YSR+VAT
Sbjct: 2 LTALLARLSDATNRAMIDQAAIDFAFLNTKAARKRLVKFLSQVPKNRTDLLPHYSRLVAT 61
Query: 501 LSTCMKDVSSMLIQMLEEEFNFLINKKDQMN--IETKIRNIRFIGELCKFKIAPAGLVFS 558
L+ M D+ + L+ +L+EEF +L KK+ + E +++NI F+ L KF++ PA ++
Sbjct: 62 LNKYMPDIGTELVSILDEEFRYLQRKKNVVKELSEVRLKNIMFLSNLTKFRVVPAHVILH 121
Query: 559 CLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVT 618
K CLDDF+ N+D LLE CGRFL RS +T R A MLE++ R +++++ D R
Sbjct: 122 MFKVCLDDFSGTNVDNIALLLENCGRFLLRSDDTRERFATMLELMRRKQSMQHFDQRQTL 181
Query: 619 LVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSD--CE 676
L+ENAYY C PPER+ K R P+ +IR L++ L K +I+ VL+ +RKL W+D
Sbjct: 182 LLENAYYQCNPPERAPIRVKERTPMELFIRHLIYDVLTKRTIDKVLKLIRKLDWADPAVV 241
Query: 677 SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQ 736
L K F K K KYG I +A L L RYH EF++ VVD+VLE++R GLE N Y + Q
Sbjct: 242 RALHKVFTKPWKMKYGSISFLAMLVYDLQRYHLEFSIGVVDQVLEDVRRGLEHNIYKLNQ 301
Query: 737 RRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
+R+A +++LGE+Y Y + SS++FDTL+ ++ FGH
Sbjct: 302 QRVATVKYLGEMYIYRLLSSSIVFDTLWSLVTFGH 336
>gi|388581341|gb|EIM21650.1| ARM repeat-containing protein [Wallemia sebi CBS 633.66]
Length = 1088
Score = 302 bits (774), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 150/346 (43%), Positives = 219/346 (63%), Gaps = 4/346 (1%)
Query: 430 KEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLE 489
+E + L+AL +LP +R +IDQ+ VEF NSK+ RKR +++ +VPR +
Sbjct: 416 EEGMSAGPAAQLNALFAKLPEMNNRAMIDQVAVEFAMFNSKAARKRAAKSIASVPRNRSD 475
Query: 490 LLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMN--IETKIRNIRFIGELCK 547
+LPYY+R+ A LS M D+ ++ +L++EF +L KK+ + E++ +N RFI EL K
Sbjct: 476 VLPYYARLTAILSKHMPDIGKGVVDLLDDEFRYLQRKKNLVKELAESRTKNARFISELTK 535
Query: 548 FKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLK 607
F + P + C K LDDFT N+DV LETCGR+L RS ETS +M L+++ R +
Sbjct: 536 FAVVPTHYILHCYKVLLDDFTGVNVDVLAIFLETCGRYLLRSEETSEKMKIFLDLMKRKQ 595
Query: 608 NVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQL 667
+++LD R L+ENAYY C PPER+AR K R P+ +IR L++ L + SI+ V + L
Sbjct: 596 QLQHLDQRQQLLLENAYYQCNPPERAARPEKYRSPIELFIRHLIYDVLARKSIDKVSKLL 655
Query: 668 RKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRL 725
RKL W D + LL F KV K ++ I L+A L L R+H EF V VVD+VL++I+
Sbjct: 656 RKLHWEDPDVIRVLLNVFTKVWKIRFSSISLLAILVYDLQRFHPEFCVMVVDKVLDDIKT 715
Query: 726 GLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
G+E N + QRR++ +++LGELYNY V S+ IFDTL+ ++ FGH
Sbjct: 716 GVEQNIFKYNQRRVSSIKYLGELYNYRSVHSNQIFDTLWTLVTFGH 761
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 129/298 (43%), Gaps = 40/298 (13%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFF--PGKSG------EDLDADRNLKAMKKRSTLKL 112
++I S LHQR+ + LL P K+ E + D + ++R L++
Sbjct: 95 VEIISALHQRFPQSFTTPLSTLLSTALNPPNKAQLAQSTPEQKEKDEIARVNRQRPILRV 154
Query: 113 LLELYFIGIIEDSSIFINIIKD----------LTSIEHLKDRDTTQTNLTLLASFARQGR 162
ELY +G++ D + + + ++ L D N+ +L SF +
Sbjct: 155 TGELYLVGVLLDPPVKKSTKETDSAKPPDGWLFIKLKELLATDKDHANIPILISFIK--- 211
Query: 163 IFLGLPLSGPGQEIYEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENE 222
F L G E+ F G T D+ F+ YY V L EH L++ +
Sbjct: 212 YFGNLIYGHGGPEL--RFVDGH--TQDR---FRSLSAAYYETVSRKLVKEHLKLQEQDKR 264
Query: 223 NAKILNAKGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSG- 281
N + GE+ E+ +YEKL K Y+ L + +L+E L + P +P++ ++ G
Sbjct: 265 NHEAYIKSGEIFEDRQQNYEKLTKVYEKLLNSTQTLSELLHIAMPELPKE--QSKGLGGL 322
Query: 282 --EDASPASGK-----DSSVPEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANE 332
D S A + DS++ + W+DEE++ FYE + DL VP +L K +E
Sbjct: 323 VVADGSTAFNRETEEYDSTIGK--WEDEESKNFYEDVLDLADIVPPSVLASVNAKTSE 378
>gi|357625856|gb|EHJ76147.1| putative UPF2 regulator of nonsense transcripts-like protein
[Danaus plexippus]
Length = 1115
Score = 301 bits (771), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 167/382 (43%), Positives = 237/382 (62%), Gaps = 10/382 (2%)
Query: 399 KDKEEKDKEKAKDPDKEKGKEKDTERKV----ETEKEKLKGVEGTN---LDALLQRLPGC 451
K+K E E+ D D ++ + D E + E+E+ + +N LDA L LP C
Sbjct: 394 KNKTETVTEEMLDEDLKEDELSDNEEPAPVVADVEQEEAQPANVSNKYALDAFLNELPNC 453
Query: 452 VSRDLIDQLTVEFCY-LNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSS 510
++R+LID V+F LN+K+NRK+L R LF+V RT L+LLP+YSR + L + DV
Sbjct: 454 INRELIDNAAVDFVLNLNTKNNRKKLTRVLFSVARTRLDLLPFYSRFASILYPVLPDVCV 513
Query: 511 MLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHH 570
L QML+++F + + KKDQ+NIE+KI+ +RFIGEL KF + CLK L DF HH
Sbjct: 514 DLCQMLKQDFKYHVRKKDQINIESKIKVVRFIGELVKFGLYSKMEALYCLKVLLHDFKHH 573
Query: 571 NIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPP 630
+I++ACNLLETCGR+LY +P+T R L+ +MR K V LD R+VT +ENA+Y PP
Sbjct: 574 HIEMACNLLETCGRYLYCNPDTHQRTMIYLQQMMRKKTVSALDSRYVTQIENAFYYVCPP 633
Query: 631 ERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHK 688
E A+ + PP+HQ+IRK+L DL KS+ E +LR +RKL W D E + ++ +
Sbjct: 634 EAPAQPKEEEPPMHQFIRKILHEDLQKSNEEKILRLMRKLNWDDPEVAAVAIQHLAGGWR 693
Query: 689 GKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGEL 748
+ +A LTA L+ + + A AVVD +LEEIR+ +E QRR+A +R+LGEL
Sbjct: 694 VRASARRALARLTAELAAWQENVAPAVVDTILEEIRVTMEDPHPKYNQRRIASVRYLGEL 753
Query: 749 YNYEHVDSSVIFDTLYLILVFG 770
YNY+ +DS +F LY + FG
Sbjct: 754 YNYKLLDSRDVFTVLYSFITFG 775
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 121/282 (42%), Gaps = 32/282 (11%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVF-FPGKSGEDLDADRNLKAMKKRSTLKLLLELYFI 119
+ +CS LHQ Y +FS + K+ F D+ + K R L+ EL +
Sbjct: 127 ITLCSTLHQTYSEFSSFFFENWQKILSFKA-------TDKITNSSKLRVDLRFYAELIAV 179
Query: 120 GIIEDSS------IFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGL---PL 169
GI + + I + ++ ++ EH N+ +L SF + G + GL +
Sbjct: 180 GIFTNKTGLPLLGIVLTVLINMDKEEH--------NNIPILLSFCKHCGEDYAGLVPKKI 231
Query: 170 SGPGQEIYEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNA 229
++ + I A+++ + Y+ ++ + L AE L+ + N + L+
Sbjct: 232 KDTAKKFNVTVPRNTFIPAEKQTAVRSLLKDYFLSLTKHLLAERAQLQALHAANQRTLHT 291
Query: 230 KGELSEENSSSYEKLRKSYDHLYRNVSSLAEAL--DMQPPVMPEDVHTTRVTSGEDASPA 287
+GELS+E E+ + +YD L + AE L D+ P + T V +
Sbjct: 292 RGELSQERKDQLEQHQATYDKLLVGAQNFAEVLGEDLGEAGEPLTLSMT-VIETQGTVTI 350
Query: 288 SGKDSSVPEP---VWDDEETRAFYECLPDLRAFVPAVLLGEA 326
G D + + W DE+TR FY LPDL+ F+P L EA
Sbjct: 351 GGNDEIIMQAGTDPWQDEDTRTFYTSLPDLKVFMPNYQLKEA 392
>gi|301102191|ref|XP_002900183.1| regulator of nonsense transcripts 2, putative [Phytophthora
infestans T30-4]
gi|262102335|gb|EEY60387.1| regulator of nonsense transcripts 2, putative [Phytophthora
infestans T30-4]
Length = 1155
Score = 299 bits (765), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 161/335 (48%), Positives = 219/335 (65%), Gaps = 5/335 (1%)
Query: 441 LDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVAT 500
LDA L V+RD D+ VEFCY NSK+ R RLV+ L+ VPRT LELL +Y+R+VAT
Sbjct: 458 LDAFFASLEDLVNRDRCDKAAVEFCYRNSKATRSRLVKTLYAVPRTHLELLAHYARLVAT 517
Query: 501 LSTCMK-DVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSC 559
L + +K D+ L+ +L EF+ LI +++Q +E+KI+NIRF+ EL KF++ P F C
Sbjct: 518 LQSVLKEDIGGELVSLLVGEFHGLIKRRNQFRLESKIKNIRFLAELVKFRLCPPATGFRC 577
Query: 560 LKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTL 619
L+ C DF HN+ VA LE CGRFLY S T R N L I+M+LK K+LDP+ TL
Sbjct: 578 LQRCFQDFQGHNVHVATTFLENCGRFLYCSKHTHARTVNCLSIMMKLKAAKHLDPQLETL 637
Query: 620 VENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSD---CE 676
VENAYY+CKPPER R K PL+ Y+ +LL+ DL+ S++ V++ LR+ PW + C
Sbjct: 638 VENAYYMCKPPERVERQVKQYDPLYLYLIRLLYQDLNGSNVNKVVKTLRRFPWQERGTC- 696
Query: 677 SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQ 736
+LK +KV KGK Q+ I + GL RYHD+ V +VD+VLE +R GLE+NDY Q
Sbjct: 697 GLVLKALLKVTKGKVLQMKWICDVVKGLVRYHDQVLVLLVDDVLEHVRYGLEVNDYRDHQ 756
Query: 737 RRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
R L +++ LGELYN V +V+ +TLYL++ H
Sbjct: 757 RSLGYVKLLGELYNCGLVSMNVVVETLYLLINHSH 791
>gi|145345414|ref|XP_001417207.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577434|gb|ABO95500.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 1134
Score = 298 bits (764), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 158/396 (39%), Positives = 236/396 (59%), Gaps = 20/396 (5%)
Query: 427 ETEKEKLK-----GVEG--TNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRA 479
ETE E+LK EG ++ L+ RL +S+D D + +FCY+ ++ R+RL++
Sbjct: 463 ETEAERLKREREENAEGRSAKVEGLIMRLSDSLSKDKADTICTDFCYIAARGGRRRLIQE 522
Query: 480 LFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNI 539
+V R+ ++ +P+Y R++ATL+ D++ + + L+ EF L+ K + N+ +++NI
Sbjct: 523 FLSVHRSEVDRIPFYGRIIATLANVFDDIAPAVSEPLKNEFYNLVKKGKRANLSERLKNI 582
Query: 540 RFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANM 599
+FIGEL KFK+ VF +K+ LDDF N+DV C L + G +L R+P TS RM ++
Sbjct: 583 KFIGELIKFKVFDDLAVFEIVKSLLDDFHGDNVDVLCCLFDVAGYYLTRTPSTSKRMGSI 642
Query: 600 LEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSS 659
L+I +RLK V LD R LV++AYY C+P +R V K+RPPLH+YIR+L++ L K +
Sbjct: 643 LDIFLRLKAVSKLDSRQCALVDSAYYKCRPVQRVV-VEKIRPPLHEYIRELIYLQLSKHT 701
Query: 660 IEHVLRQLRKLPWSDCESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEV 719
++ V QLRKLPW + E YLLK +KV KG+Y + L+A+L A LS+Y+ AV +D +
Sbjct: 702 LDKVATQLRKLPWDETEPYLLKRLLKVSKGRYASVPLVAALIARLSQYYPTLAVRALDTL 761
Query: 720 LEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHGTAET--Y 777
LE+IR GLE N+ M QRR+A+MR L LY + DTLYLI+ G+ E Y
Sbjct: 762 LEDIRFGLETNETWMHQRRVANMRLLALLYKERVALFRELMDTLYLIISIGYDGREAPDY 821
Query: 778 WTHQKIVSGSGWLLLFLRLVVTTLTEALPRGNLIDF 813
T + LR+V T L A I +
Sbjct: 822 LTDT----------IRLRMVCTLLETAFKGRGAISY 847
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 147/293 (50%), Gaps = 12/293 (4%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLD-ADRNLKAM----KKRSTLKLLLE 115
++I S +HQ Y DF+ LI L P K L A+ ++A+ ++R+ L+L +E
Sbjct: 192 VEIISCMHQTYADFAAPLIAALSAYVLPPKPETLLKMAEGEVEALPSPLQRRTKLRLFME 251
Query: 116 LYFIGIIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQGRIFLGLPLSGPGQE 175
L+ +G+ + ++ +K+L +E+ D Q +L+ LASFA+ + + G E
Sbjct: 252 LHLVGVCPEVKPVLDAVKELARLEYKTAPDLYQHSLSTLASFAKT----FAVEMLGAEPE 307
Query: 176 IYEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSE 235
+ E + D +K F+ + Y + + +L +++ E E +++L G +SE
Sbjct: 308 V-EMASNDFILAPDVQKAFRTTLNEYCDRLFFVLMEAFSAVTAQEREMSRLLERTGAISE 366
Query: 236 ENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASG-KDSSV 294
S + L K +D L + ++LAEAL + P M + V G G K S
Sbjct: 367 AASVEFAALTKVFDGLLKGATTLAEALSRELPEMKKQVEEKVARGGTMELHRGGVKSSGE 426
Query: 295 PEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASE 347
+W+DEE + FYE LPDLRA +PAVLL A ++ NE + L++ + +E
Sbjct: 427 RSDMWEDEEQQHFYETLPDLRASIPAVLLVNATNE-NETEAERLKREREENAE 478
>gi|193709051|ref|XP_001945089.1| PREDICTED: regulator of nonsense transcripts 2 isoform 1
[Acyrthosiphon pisum]
Length = 1131
Score = 298 bits (764), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 146/335 (43%), Positives = 223/335 (66%), Gaps = 5/335 (1%)
Query: 441 LDALLQRLPGCVSRDLIDQLTVEF-CYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVA 499
++ +++LP CV+R++ID L +EF YLN+K+NRK+LV+ LF+VPRT ++LLP+Y+R+VA
Sbjct: 468 FESFIEQLPKCVNREMIDNLAIEFLIYLNTKNNRKKLVKVLFSVPRTRVDLLPFYTRLVA 527
Query: 500 TLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSC 559
L+ M +V+ L +L+ +F + + KKDQ+NIETK++ +R+IGE+ KF + C
Sbjct: 528 ILNPLMPEVALELCSLLKSDFRYNVKKKDQINIETKLKVVRYIGEMVKFNLMIKSEALHC 587
Query: 560 LKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTL 619
K L+DF+HH+I++ C LLET GRFLYRSPE+ R LE +MR+K+V L P +VT+
Sbjct: 588 FKMLLNDFSHHHIEMGCALLETAGRFLYRSPESHHRTKIYLEQMMRVKSVSALRPVYVTM 647
Query: 620 VENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDL-DKSSIEH-VLRQLRKLPWSDC-- 675
+ENAYY P + A + K RP LH++IR LL+++L D E+ +L L+++ W +
Sbjct: 648 IENAYYFVNPTDSPAVMKKQRPILHEFIRHLLYNELKDAPEKENIILGLLKQMDWENFAE 707
Query: 676 ESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQ 735
++YL+KC + Y I +A L A Y D VVD V+E+IR+GLE N
Sbjct: 708 KTYLIKCLTEAWNVTYPMISDLACLVAAFVDYDDSIGTRVVDGVMEDIRVGLETNLVKFN 767
Query: 736 QRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
QRR+A +++ GELYNY ++S+ +F LY ++ FG
Sbjct: 768 QRRIAMIKYFGELYNYRLIESNDVFKVLYSLVSFG 802
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 127/269 (47%), Gaps = 26/269 (9%)
Query: 63 ICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKK-RSTLKLLLELYFIGI 121
+C+ L+ Y DFS + K+ ++ D + M K R L+L EL GI
Sbjct: 172 LCTQLNTTYSDFSKIFFEQWQKIL-------NIKKDDKIANMSKFRVDLRLFAELTSAGI 224
Query: 122 IEDSSIFINIIKDLTSIEHLKDRDTTQ-TNLTLLASFARQ-GRIFLGLPLSGPGQEIYEE 179
I + ++ ++ +I L + D + N+ ++ SF + G + GL + Q++ +
Sbjct: 225 IPQKEGLV-LLGNILTI--LINSDLQEHNNINIILSFCKYCGDDYAGL-VPKEMQDLADR 280
Query: 180 FF----KGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSE 235
F + I++D++K + YY ++ ++ H L E +N KIL KGEL
Sbjct: 281 FDVEIPRSNMISSDKQKNVRALLKDYYVSLNNHIKRMHNDLEYAEKQNEKILQTKGELRP 340
Query: 236 ENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASGKDSSVP 295
E + E++ +Y LY + + A+ L+ V+ E+ + +S ED + + P
Sbjct: 341 ERKAKNEQMNVTYQKLYSSALTFADILNEPVIVLKEE---KKNSSTEDLTDSELDIVGTP 397
Query: 296 EP-----VWDDEETRAFYECLPDLRAFVP 319
P +W+D+ET+ FYE P+L ++P
Sbjct: 398 TPSELTSLWEDDETQKFYEEFPNLSNYIP 426
>gi|401889160|gb|EJT53100.1| hypothetical protein A1Q1_00107 [Trichosporon asahii var. asahii
CBS 2479]
Length = 1021
Score = 298 bits (764), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 217/648 (33%), Positives = 330/648 (50%), Gaps = 71/648 (10%)
Query: 145 DTTQTNLTLLASFARQ-GRIFLGLPLSGPGQEIYEEFFKGLNITADQKKIFKKAFHTYYN 203
D +N+ LL SF + GR +LG P E E + L + + +K ++ F Y+N
Sbjct: 153 DPQFSNMPLLTSFLKTFGRAYLG-PKPDKADEQLPEGVEEL-VPPEMQKKMRELFTNYFN 210
Query: 204 AVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYRNVSSLAEALD 263
+ + L T R N A I + GE+ E+ +YE++ ++ + L V L++ L
Sbjct: 211 SASKALVKGQTDKR---NHEAYIRS--GEIFEDRQHAYERMTRAIERLTGGVQGLSDLLG 265
Query: 264 MQPPVMPEDVHTTRVTSG----EDASPASGK-DSSVPEPVWDDEETRAFYECLPDLRAFV 318
+ P +P ++ SG + AS + + D +VP +WDD+E R FYE LPDL+ V
Sbjct: 266 LPMPTLPTAASISK--SGLQIVDSASTFTVREDGAVPGGIWDDDEERRFYENLPDLQDLV 323
Query: 319 PAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTAEVSADLGASPEGKSVEKGK 378
P +LG + A+E KP + E + +V D+ E +E
Sbjct: 324 PPSILGIKQKTADEK--KPENAEGEEGGEEAAPDAEEEAQRKVQDDIRRQLEQLELESSA 381
Query: 379 DKEEKEKEKAKDPDK---EKGKGKDKEEKDKEKAKDPDKEKGKEKDTERKVETEKEKLKG 435
E E + D ++ G G +D DP + + TE++ ++
Sbjct: 382 --AESETPQPMDRNETVLSNGSGP----QDGSPDDDP------QPASLEASLTEEDGMQS 429
Query: 436 VEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYS 495
L AL LP V+R+++D+L VEF YLNSK+ R+RL L VP+T +LLP+Y+
Sbjct: 430 GPAARLTALFAALPEAVNREMVDKLAVEFAYLNSKAARRRLATFLAAVPKTRTDLLPHYA 489
Query: 496 RMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGL 555
R +A L M DV +++ + L +++N+RF GEL KFK+A
Sbjct: 490 RFIAILDPYMPDVGVAVLKSRKRAIRELDG--------VRLKNVRFYGELAKFKVARPYT 541
Query: 556 VFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPR 615
+ LK LDDF NI+ NLLETCGRFL R+P+T+ NM +V +LD R
Sbjct: 542 ILHVLKVFLDDF-KFNIENISNLLETCGRFLLRNPDTAETSKNM--------SVTHLDQR 592
Query: 616 HVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDC 675
+ +++NA+Y+ R AR + PP+ +I+ LLF L K + + VL LRKL W D
Sbjct: 593 YNIMLDNAFYI-----RVAREIEELPPMQAFIQHLLFDVLMKRTQDKVLVLLRKLHWEDA 647
Query: 676 ESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLEL------ 729
E+ F + + KY I L A L L RYH +FA+AVVD+V+E+IR+G+E+
Sbjct: 648 ET-----FTDIWEAKYENIGLTAGLVHDLQRYHPDFAIAVVDQVMEDIRIGMEVSCLIAQ 702
Query: 730 ------NDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
N + QRR+A ++FLGELY Y V+++VIFD L+ +L FGH
Sbjct: 703 PTDNQENIFKFNQRRIASIKFLGELYMYRVVNAAVIFDVLWSLLSFGH 750
>gi|328720608|ref|XP_003247078.1| PREDICTED: regulator of nonsense transcripts 2 isoform 2
[Acyrthosiphon pisum]
Length = 1094
Score = 298 bits (763), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 146/337 (43%), Positives = 224/337 (66%), Gaps = 9/337 (2%)
Query: 441 LDALLQRLPGCVSRDLIDQLTVEF-CYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVA 499
++ +++LP CV+R++ID L +EF YLN+K+NRK+LV+ LF+VPRT ++LLP+Y+R+VA
Sbjct: 468 FESFIEQLPKCVNREMIDNLAIEFLIYLNTKNNRKKLVKVLFSVPRTRVDLLPFYTRLVA 527
Query: 500 TLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSC 559
L+ M +V+ L +L+ +F + + KKDQ+NIETK++ +R+IGE+ KF + C
Sbjct: 528 ILNPLMPEVALELCSLLKSDFRYNVKKKDQINIETKLKVVRYIGEMVKFNLMIKSEALHC 587
Query: 560 LKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTL 619
K L+DF+HH+I++ C LLET GRFLYRSPE+ R LE +MR+K+V L P +VT+
Sbjct: 588 FKMLLNDFSHHHIEMGCALLETAGRFLYRSPESHHRTKIYLEQMMRVKSVSALRPVYVTM 647
Query: 620 VENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDL----DKSSIEHVLRQLRKLPWSDC 675
+ENAYY P + A + K RP LH++IR LL+++L +K +I +L L+++ W +
Sbjct: 648 IENAYYFVNPTDSPAVMKKQRPILHEFIRHLLYNELKDAPEKENI--ILGLLKQMDWENF 705
Query: 676 --ESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYG 733
++YL+KC + Y I +A L A Y D VVD V+E+IR+GLE N
Sbjct: 706 AEKTYLIKCLTEAWNVTYPMISDLACLVAAFVDYDDSIGTRVVDGVMEDIRVGLETNLVK 765
Query: 734 MQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
QRR+A +++ GELYNY ++S+ +F LY ++ FG
Sbjct: 766 FNQRRIAMIKYFGELYNYRLIESNDVFKVLYSLVSFG 802
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 127/269 (47%), Gaps = 26/269 (9%)
Query: 63 ICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKK-RSTLKLLLELYFIGI 121
+C+ L+ Y DFS + K+ ++ D + M K R L+L EL GI
Sbjct: 172 LCTQLNTTYSDFSKIFFEQWQKIL-------NIKKDDKIANMSKFRVDLRLFAELTSAGI 224
Query: 122 IEDSSIFINIIKDLTSIEHLKDRDTTQ-TNLTLLASFARQ-GRIFLGLPLSGPGQEIYEE 179
I + ++ ++ +I L + D + N+ ++ SF + G + GL + Q++ +
Sbjct: 225 IPQKEGLV-LLGNILTI--LINSDLQEHNNINIILSFCKYCGDDYAGL-VPKEMQDLADR 280
Query: 180 FF----KGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSE 235
F + I++D++K + YY ++ ++ H L E +N KIL KGEL
Sbjct: 281 FDVEIPRSNMISSDKQKNVRALLKDYYVSLNNHIKRMHNDLEYAEKQNEKILQTKGELRP 340
Query: 236 ENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASGKDSSVP 295
E + E++ +Y LY + + A+ L+ V+ E+ + +S ED + + P
Sbjct: 341 ERKAKNEQMNVTYQKLYSSALTFADILNEPVIVLKEE---KKNSSTEDLTDSELDIVGTP 397
Query: 296 EP-----VWDDEETRAFYECLPDLRAFVP 319
P +W+D+ET+ FYE P+L ++P
Sbjct: 398 TPSELTSLWEDDETQKFYEEFPNLSNYIP 426
>gi|406699114|gb|EKD02331.1| hypothetical protein A1Q2_03387 [Trichosporon asahii var. asahii
CBS 8904]
Length = 1045
Score = 298 bits (762), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 217/648 (33%), Positives = 330/648 (50%), Gaps = 71/648 (10%)
Query: 145 DTTQTNLTLLASFARQ-GRIFLGLPLSGPGQEIYEEFFKGLNITADQKKIFKKAFHTYYN 203
D +N+ LL SF + GR +LG P E E + L + + +K ++ F Y+N
Sbjct: 177 DPQFSNMPLLTSFLKTFGRAYLG-PKPDKADEQLPEGVEEL-VPPEMQKKMRELFTNYFN 234
Query: 204 AVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYRNVSSLAEALD 263
+ + L T R N A I + GE+ E+ +YE++ ++ + L V L++ L
Sbjct: 235 SASKALVKGQTDKR---NHEAYIRS--GEIFEDRQHAYERMTRAIERLTGGVQGLSDLLG 289
Query: 264 MQPPVMPEDVHTTRVTSG----EDASPASGK-DSSVPEPVWDDEETRAFYECLPDLRAFV 318
+ P +P ++ SG + AS + + D +VP +WDD+E R FYE LPDL+ V
Sbjct: 290 LPMPTLPTAASISK--SGLQIVDSASTFTVREDGAVPGGIWDDDEERRFYENLPDLQDLV 347
Query: 319 PAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTAEVSADLGASPEGKSVEKGK 378
P +LG + A+E KP + E + +V D+ E +E
Sbjct: 348 PPSILGIKQKTADEK--KPENAEGEEGGEEAAPDAEEEAQRKVQDDIRRQLEQLELESSA 405
Query: 379 DKEEKEKEKAKDPDK---EKGKGKDKEEKDKEKAKDPDKEKGKEKDTERKVETEKEKLKG 435
E E + D ++ G G +D DP + + TE++ ++
Sbjct: 406 --AESETPQPMDRNETVLSNGSGP----QDGSPDDDP------QPASLEASLTEEDGMQS 453
Query: 436 VEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYS 495
L AL LP V+R+++D+L VEF YLNSK+ R+RL L VP+T +LLP+Y+
Sbjct: 454 GPAARLTALFAALPEAVNREMVDKLAVEFAYLNSKAARRRLATFLAAVPKTRTDLLPHYA 513
Query: 496 RMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGL 555
R +A L M DV +++ + L +++N+RF GEL KFK+A
Sbjct: 514 RFIAILDPYMPDVGVAVLKSRKRAIRELDG--------VRLKNVRFYGELAKFKVARPYT 565
Query: 556 VFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPR 615
+ LK LDDF NI+ NLLETCGRFL R+P+T+ NM +V +LD R
Sbjct: 566 ILHVLKVFLDDF-KFNIENISNLLETCGRFLLRNPDTAETSKNM--------SVTHLDQR 616
Query: 616 HVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDC 675
+ +++NA+Y+ R AR + PP+ +I+ LLF L K + + VL LRKL W D
Sbjct: 617 YNIMLDNAFYI-----RVAREIEELPPMQAFIQHLLFDVLMKRTQDKVLVLLRKLHWEDA 671
Query: 676 ESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLEL------ 729
E+ F + + KY I L A L L RYH +FA+AVVD+V+E+IR+G+E+
Sbjct: 672 ET-----FTDIWEAKYENIGLTAGLVHDLQRYHPDFAIAVVDQVMEDIRIGMEVSCLIAQ 726
Query: 730 ------NDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
N + QRR+A ++FLGELY Y V+++VIFD L+ +L FGH
Sbjct: 727 PTDNQENIFKFNQRRIASIKFLGELYMYRVVNAAVIFDVLWSLLSFGH 774
>gi|393245200|gb|EJD52711.1| ARM repeat-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 1083
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 155/344 (45%), Positives = 216/344 (62%), Gaps = 5/344 (1%)
Query: 433 LKGVEGTN--LDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLEL 490
L V+G + L ALL LP +R LIDQ+ ++F LNSK+ RKRL++ L VPR +L
Sbjct: 431 LATVQGPSQMLTALLASLPDATNRTLIDQIAIDFAMLNSKAARKRLIKFLSQVPRQRTDL 490
Query: 491 LPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNI-ETKIRNIRFIGELCKFK 549
LP+Y R++ATL+ M D+ ++ LEEEF +L KK + ET+IRN + L KFK
Sbjct: 491 LPHYGRLIATLNPYMPDIGKEVVATLEEEFKYLQRKKSVAELNETRIRNTTYFSVLTKFK 550
Query: 550 IAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNV 609
I P ++ +K LDDF NI+ LLE CGRFL RS +T RM +MLE + R ++
Sbjct: 551 IVPTHVILHIVKVFLDDFAGTNIECTALLLEGCGRFLLRSDDTKERMTSMLEAMKRKQHA 610
Query: 610 KNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRK 669
++LD R+ L+ENA+Y C PPER+ R K R + ++R ++F L K +I+ LR LR+
Sbjct: 611 QHLDMRYQLLLENAFYQCNPPERAPRQEKERSLMELFVRHVMFDLLSKRTIDKCLRLLRR 670
Query: 670 LPWSDCESYLL--KCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGL 727
LPW D E+ + F K K KYG I L+A L L RY+ F V +VD+V E+IRLG+
Sbjct: 671 LPWEDPEAVRIVRAIFAKPWKIKYGNISLMAMLVYDLQRYNPGFTVELVDQVTEDIRLGM 730
Query: 728 ELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
E N Y QRR+A M++ GELY Y V S+++FDTL+ ++ FGH
Sbjct: 731 EQNLYKRNQRRVATMKYFGELYIYRVVSSTMVFDTLWSLVTFGH 774
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 127/304 (41%), Gaps = 47/304 (15%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLL---------KVFFPGKSGEDLDADRNLKAMKKRSTLK 111
L+I +H+R+ D + LL P + ED N + +++++ L+
Sbjct: 90 LQILCAIHRRFPDAMLAAVQELLTPPPRPPKEAANNPQREKED-----NERVVRQKAALR 144
Query: 112 LLLELYFIGIIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFAR-QGRIFLGL-PL 169
L EL + II+D + +++ L D T+L +L F + GR FLGL P
Sbjct: 145 LCAELALLRIIQDGPGKSGAEWIMKTVKTLLSNDPQLTSLPILVLFIKVYGRPFLGLTPA 204
Query: 170 SGPG----------------QEIYEEFFKGLN------ITADQKKIFKKAFHTYYNAVQE 207
S +E E + + + + F++ Y+ V +
Sbjct: 205 STKAAQRTTAEAGTLADSVSREAPENRLAQITDESEEMVEKEVRDRFRRMCEGYFEKVGQ 264
Query: 208 LLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPP 267
L EH LR+ + N + GE+ E+ +YEK+ ++Y+ + +L++ L + P
Sbjct: 265 KLVIEHNRLREQDRRNHEAYIRSGEIFEDRQKAYEKMTQAYEKVLTGCQTLSDLLQLPMP 324
Query: 268 VMPEDVHTTRVTSGEDASPASGKDSSVPE-PV------WDDEETRAFYECLPDLRAFVPA 320
+P D R S G V E P W+D+E R FYE + DL+ FVP
Sbjct: 325 NLPTD--EPRGNDSIGLSTNVGAPGVVEEDPTQYATSKWEDDEERRFYEDIQDLKDFVPK 382
Query: 321 VLLG 324
LLG
Sbjct: 383 TLLG 386
>gi|330806150|ref|XP_003291036.1| hypothetical protein DICPUDRAFT_98882 [Dictyostelium purpureum]
gi|325078792|gb|EGC32424.1| hypothetical protein DICPUDRAFT_98882 [Dictyostelium purpureum]
Length = 1334
Score = 295 bits (756), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 212/723 (29%), Positives = 365/723 (50%), Gaps = 46/723 (6%)
Query: 58 VYFLKICSLLHQRYKDFSPCLIDGLLKVFFPGKSG-EDLDADRNLKAMKKRSTLKLLLEL 116
+Y +++ S+++Q+Y+D + + + F P D +++RN K K+R L+L+L+L
Sbjct: 334 IYVVQVLSIMYQKYEDVDSLIQENIPPFFTPFIIPLTDSESERNSKITKRRYILRLMLDL 393
Query: 117 YFIGIIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQGRIFLGLPLSGPGQEI 176
+ I II +I L+S+ +D+D NL +F +Q + Q++
Sbjct: 394 FCIDIIHSYQPVYKLITKLSSLAVEQDKDQGYANLLTFLNFLKQFQQIFNY--KDKVQDL 451
Query: 177 YEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEE 236
F IT ++ + YY + L E +SLR E E KGE+ +E
Sbjct: 452 KSTFLTL--ITEEEFNNTRNIITNYYQTLCNFLNKEKSSLRDKEKEIKLFYRTKGEVPDE 509
Query: 237 NSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASGKDSSVPE 296
SSSY+++RK Y+ L N+S+ AE + +P +P + ++ ++ E + + V +
Sbjct: 510 ASSSYDQMRKQYEKLITNISNYAELIG-EP--VPNNDYSFQLEE-EINNEQKTEQLEVFD 565
Query: 297 PVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQ 356
+++EE + FYE + + G+ +H + P PL PT+ ++ +
Sbjct: 566 SPFENEEQKHFYE--------ITFTVPGKDQH-LHTPKASPL-SPTNQSTSSTPSLSSTP 615
Query: 357 DTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEK 416
+S SPE ++E ++KE K E P K
Sbjct: 616 TLTSIS-----SPE--TIENKENKEITSPTATK----ESPTTTTTTTTTDSAPNTPSKNS 664
Query: 417 GKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRL 476
D VE EK+K+KG+ L+ LL++L ID + EF + K + L
Sbjct: 665 KPTDD----VEKEKQKIKGI----LEDLLRQLKNTHKPSSIDSIVQEFIKVPPKYTKPFL 716
Query: 477 VRALFNVPRTSLELLPYYSRMVATL--STCMKDVSSMLIQMLEEEFNFLINKKDQMNIET 534
+ L ++ L+ +P +SR ++T+ S+ KD + I+ +E++ L KK+ +
Sbjct: 717 QQLLQ---QSRLDHIPTFSRFLSTIYQSSTYKDYVNNYIKEIEDDQKGLFEKKEPNLLTF 773
Query: 535 KIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSI 594
KIRNI +IGE KF + P FS L+ C DDFT+HNID+AC L ETCGR+LYR+ ++ I
Sbjct: 774 KIRNIVYIGEFIKFGVLPRTTAFSYLRICFDDFTNHNIDIACYLFETCGRYLYRTADSQI 833
Query: 595 RMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSD 654
R+ NML+IL++ +N L +VE+AY C+P K P+ ++++ L+F
Sbjct: 834 RLRNMLDILIKYRNATTLGSSKEPMVESAYLACRP---IVVKKKQIDPIKKFVKFLIFKH 890
Query: 655 LDKSSIEHVLRQLRKLPWSDCESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVA 714
L ++++ ++ ++ +LPW +CE YL K + V KGK+G I+LIA + L Y+ F +
Sbjct: 891 LSTATLDRIVEKILQLPWPECEGYLTKYLLDVQKGKFGNIYLIADILFHLRDYYPTFVQS 950
Query: 715 VVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHGTA 774
V+ ++ EEI +G E ND+ Q+R+ + GELYN ++++ +FD L L +G+ T
Sbjct: 951 VIWKLYEEITVGFEKNDFNQNQKRIMQITLFGELYNACLLETNHVFDLLIGALEYGYTTT 1010
Query: 775 ETY 777
+
Sbjct: 1011 HLF 1013
>gi|452986993|gb|EME86749.1| hypothetical protein MYCFIDRAFT_202634 [Pseudocercospora fijiensis
CIRAD86]
Length = 1178
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 150/361 (41%), Positives = 225/361 (62%), Gaps = 4/361 (1%)
Query: 394 EKGKGKDKEEKDKEKAKDPDKEKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVS 453
E GK K K+ D++ K D+ + ET G +DALL RL +
Sbjct: 422 EDGK-KKKDGNDEQVGKKIDESNDSKDKPAESEETSTAIANKTVGAQVDALLTRLHELTT 480
Query: 454 RDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLI 513
+D +DQ ++FC+LNSK++R RL++A+ +VP+ +LLP Y+R++ TL + D+ +I
Sbjct: 481 KDQVDQFAIDFCFLNSKASRNRLIKAVEDVPKGRTDLLPLYARLITTLGRYLNDIPEAMI 540
Query: 514 QMLEEEFNFLINKKDQMNI-ETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNI 572
+ L++EF L +K + + + ++ NIR+I EL KF + P ++F CLK LDDF+ NI
Sbjct: 541 KYLDDEFRSLQRRKSKDFLGQVRMVNIRYIAELTKFGVVPEHVIFHCLKVSLDDFSRMNI 600
Query: 573 DVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPER 632
+V NLLE CGR+L R+P+TS RM + LE L R K ++L + L+ENA Y PPER
Sbjct: 601 EVIANLLENCGRYLLRNPDTSPRMTSFLETLQRKKAAQHLGQQERMLIENAAYYVNPPER 660
Query: 633 SARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGK 690
+A K R L ++RKL++SDL K S++ V++Q+RKL W + E L K F+K K K
Sbjct: 661 AAIQQKERTTLDLFVRKLVYSDLSKKSLDKVVKQIRKLHWEESEVVDILRKIFVKPGKIK 720
Query: 691 YGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYN 750
+G I+L+ + A L R+H F V V+DE+LE + +GLE+ND+ QRR+A M++LGELY
Sbjct: 721 FGNIYLLGMMLAALWRFHTSFVVTVLDELLERMTVGLEVNDFKYNQRRIAEMKYLGELYM 780
Query: 751 Y 751
Y
Sbjct: 781 Y 781
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 83/180 (46%), Gaps = 8/180 (4%)
Query: 194 FKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYR 253
F+ Y++ V+ + + L NA+ GE+ E+ ++Y+K K+ + L
Sbjct: 289 FRNIMQRYFDDVKAHIVRDQERLANQGKRNAEAYVKSGEVFEDRQANYDKAVKAQEKLVA 348
Query: 254 NVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASG---KDSSVPEPVWDDEETRAFYEC 310
+ +LAE L + P + E G +G + S +W+DE+ R FYE
Sbjct: 349 SAQTLAEVLGAEMPDLSEKDTANAGFEGSVGLVKTGEYLRGQSEGAGIWEDEDERRFYEN 408
Query: 311 LPDLRAFVPAVLL--GEAEHKANEPSV-KPLEQPTDPASEPDQGQLAAQDTAEVSADLGA 367
L DL+ VP +LL G+ + N+ V K +++ D +P + + + TA + +GA
Sbjct: 409 LTDLKDRVPGILLEDGKKKKDGNDEQVGKKIDESNDSKDKPAESEETS--TAIANKTVGA 466
>gi|170047055|ref|XP_001851054.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167869611|gb|EDS32994.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 1139
Score = 289 bits (740), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 145/333 (43%), Positives = 212/333 (63%), Gaps = 3/333 (0%)
Query: 441 LDALLQRLPGCVSRDLIDQLTVEFCY-LNSKSNRKRLVRALFNVPRTSLELLPYYSRMVA 499
+A + + CV+ +LID ++F LN+K+NRKR+V+ LF V RT L+LLP Y+R VA
Sbjct: 444 FEAFIANMQNCVNTELIDSAAIDFLLNLNTKNNRKRIVKTLFGVQRTRLDLLPMYARFVA 503
Query: 500 TLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSC 559
++ DV+ L QML+ +F + I KKDQ+NIETKI+ +R+IGEL KF I C
Sbjct: 504 IVNLVSPDVAVDLSQMLKVDFKYQIKKKDQINIETKIKVVRYIGELVKFGIYNKIEALFC 563
Query: 560 LKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTL 619
LK L +F HH+I++ C LE CG +LY +T +R LE +MRLK +D RH
Sbjct: 564 LKCLLHNFQHHHIEMTCAFLEVCGVYLYNCRDTRLRTNVYLEQMMRLKTNTTMDSRHAQQ 623
Query: 620 VENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCES-- 677
V+ AYYL K PE K+RP +H YIR L+F +L+K++++ +++ LR+L W D ++
Sbjct: 624 VDTAYYLVKQPEGMRIQRKIRPLIHTYIRHLVFEELNKANVDKMIKLLRRLNWEDRDTHD 683
Query: 678 YLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQR 737
Y +KC K + +Y I +A L +GLS Y ++ V V+D V E+IR GLE++D + QR
Sbjct: 684 YAVKCLAKAYSIRYHLIRSLADLVSGLSSYQEKAVVKVIDAVFEDIRAGLEIHDTKLAQR 743
Query: 738 RLAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
R+A ++LGELYNY V+S + +TLY I+ G
Sbjct: 744 RIAMAKYLGELYNYRLVESGNVLNTLYSIISLG 776
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 131/284 (46%), Gaps = 24/284 (8%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
L +CS LHQ Y DFS L + KV K+GE + K R L+ EL +G
Sbjct: 123 LTLCSKLHQTYGDFSGSLFENWQKVLH-VKAGEKIG-----NPSKMRVDLRFYGELISVG 176
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGLPLSGPGQEIYEE 179
I + + LT++ + +NL+++ SF R G + GL P + + E
Sbjct: 177 IFTNKVGLPLLGLCLTAL--ISQDKEEHSNLSIILSFCRHCGDEYAGL---VPKKML--E 229
Query: 180 FFKGLNIT--------ADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKG 231
K ++T +D+++ + YY + E L+ EH L+ E ++L +KG
Sbjct: 230 LAKKHSVTVPSSNLLPSDKQQNLRNLLKDYYQTLFEHLKNEHKQLQYAEKSRRRMLESKG 289
Query: 232 ELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASGKD 291
E+S + E L+ +Y+ L + ++A+ L+ P + +V T G +
Sbjct: 290 EVSNDKKEQIEMLQNNYEKLLSSTQTMADLLNESLPELTVEVEVC-PTEGTVIDNIGDEQ 348
Query: 292 SSVPEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSV 335
+ +P W DE+TR FY LPDLR F+P + E +EP++
Sbjct: 349 FANLDP-WGDEDTRNFYVNLPDLRQFLPNYCGKKEEILPDEPAI 391
>gi|299751391|ref|XP_002911637.1| transcription factor [Coprinopsis cinerea okayama7#130]
gi|298409353|gb|EFI28143.1| transcription factor [Coprinopsis cinerea okayama7#130]
Length = 1141
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 151/347 (43%), Positives = 213/347 (61%), Gaps = 28/347 (8%)
Query: 441 LDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVAT 500
L ALL +LP VSR +IDQ VEF +LNSK+ RKRL++ + VP+ ++LLP+YSR++A
Sbjct: 490 LTALLAKLPDAVSRTMIDQAAVEFAFLNSKAARKRLIKFMSQVPKNRVDLLPHYSRLIAI 549
Query: 501 LSTCMKDVSSMLIQMLEEEFNFLINKKDQMN--IETKIRNIRFIGELCKFKIAPAGLVFS 558
L+ M D+ S ++ +L+EEF +L KK+ + E +++NI F+ L KF++ P L+
Sbjct: 550 LNKYMPDIGSEVVSILDEEFRYLQRKKNVVKELAEVRMKNIIFLSNLTKFRVVPFHLIL- 608
Query: 559 CLKACLDDFTHHNIDVACN------------LLETCGRFLYRSPETSIRMANMLEILMRL 606
H V + LLE CGRFL R+ ET R MLE++ R
Sbjct: 609 -----------HMFKVCLDDFAGTNIENIALLLEGCGRFLLRTEETRERFGTMLELMKRK 657
Query: 607 KNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQ 666
+ +++LD R + L+ENAYY C PPER+ R K+R P+ +IR L++ L K +I+ VL+
Sbjct: 658 QTMQHLDQRQLLLLENAYYQCNPPERAPRQEKIRTPMELFIRHLIYDVLSKKTIDKVLKL 717
Query: 667 LRKLPWSD--CESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIR 724
+RKL W D L K F K K +Y I L+A LT L RY FA+AVVD++LE+IR
Sbjct: 718 IRKLDWDDENVRRVLHKVFTKPWKIRYSNISLLAMLTYDLQRYRPAFAIAVVDQILEDIR 777
Query: 725 LGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
GLE N Y QRRLA +++LGELY Y + S +IFDTL+ I+ FGH
Sbjct: 778 RGLEQNVYSTNQRRLATVKYLGELYIYRLLSSGIIFDTLWTIVTFGH 824
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 141/302 (46%), Gaps = 47/302 (15%)
Query: 63 ICSLLHQRYKD-FSPCLIDGLLKVFFPGKSG-------EDLDADRNLKAMKKRSTLKLLL 114
IC+L H+R+ + F+P +I L P E + + N + ++R L++
Sbjct: 107 ICAL-HRRFPNTFTPAVISSLATALTPPTKAYLATLTPEQREKEDNARISRQRPILRVCS 165
Query: 115 ELYFIGIIEDS------SIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGL 167
EL +GII DS + +KDL S D ++L LLA+F + GR FLGL
Sbjct: 166 ELALVGIIRDSPDRSGGEWIMKTMKDLLS------NDPALSSLPLLATFLKSYGRPFLGL 219
Query: 168 --PLSG--------PG---QEIYEEFFKGLNITA---------DQKKIFKKAFHTYYNAV 205
P + PG + + E +G T D + FK+ Y+ +V
Sbjct: 220 VPPATAKQIPSDSEPGTLSENLANESQEGKPATVSEEEELIEQDIRDRFKRMCEGYFESV 279
Query: 206 QELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQ 265
+ L EH L++ + N + GE+ E+ +YEK+ KSY+ L+ + SL+E L +
Sbjct: 280 CKKLVKEHKRLQEQDKRNHEAYIRSGEIFEDRQQAYEKMTKSYEKLHSSCQSLSELLYLP 339
Query: 266 PPVMPEDVH---TTRVTSGEDASPASGKDSSVPEPVWDDEETRAFYECLPDLRAFVPAVL 322
P +P + ++ S ++ ++ W+DEE R FYE +PDLR FVP+ +
Sbjct: 340 LPELPTSTQKSDSIQIGSSGNSLLTDSDENITTGGKWEDEEERRFYEEIPDLRDFVPSSV 399
Query: 323 LG 324
LG
Sbjct: 400 LG 401
>gi|347963633|ref|XP_310780.5| AGAP000337-PA [Anopheles gambiae str. PEST]
gi|333467107|gb|EAA06251.5| AGAP000337-PA [Anopheles gambiae str. PEST]
Length = 1132
Score = 286 bits (732), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 146/333 (43%), Positives = 211/333 (63%), Gaps = 3/333 (0%)
Query: 441 LDALLQRLPGCVSRDLIDQLTVEFCY-LNSKSNRKRLVRALFNVPRTSLELLPYYSRMVA 499
+ +Q L CV+R+LID ++F LN+KS R+RLV+ LF V RT L+LLP Y+R VA
Sbjct: 458 FEQFVQNLQNCVNRELIDNAAIDFLLNLNTKSKRRRLVKVLFGVQRTRLDLLPMYARFVA 517
Query: 500 TLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSC 559
+ DV+ L QML+ +F + + KKDQ+NIETKI+ +R+IGEL KF I C
Sbjct: 518 IVDLVSPDVAHELCQMLKIDFKYHLKKKDQINIETKIKVVRYIGELVKFGIYKKLEALYC 577
Query: 560 LKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTL 619
L+ L F HHN+++ C LE CG +LY P++ +R LE +MRLK + R+V
Sbjct: 578 LRCLLHSFQHHNVEMTCAFLEVCGVYLYNCPDSRMRTNAFLEQMMRLKMNTTMLDRYVQQ 637
Query: 620 VENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSD--CES 677
VEN YYL K PE K RP +H YIR+L+ +LDKS+++ +++ LR+L W D +
Sbjct: 638 VENVYYLVKRPEGLRMARKERPLVHTYIRQLICRELDKSNVDKMIKLLRRLGWDDEGTFA 697
Query: 678 YLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQR 737
Y ++C + + +Y I +A L AGL Y + + V+D VLE+IR GLE++D + QR
Sbjct: 698 YAVRCLSRAYNIRYHLIRSLADLLAGLHSYQERAVLHVIDTVLEDIRAGLEIHDNKLAQR 757
Query: 738 RLAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
R+A +++LGELYNY+ VD+ I +TLY I+ FG
Sbjct: 758 RVAMVKYLGELYNYQLVDADNILNTLYSIISFG 790
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 122/274 (44%), Gaps = 23/274 (8%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
L +C+ LH+ Y +F P L++ ++ P K GE + K R L+ EL +G
Sbjct: 128 LTLCNYLHRHYAEFGPTLLENWQRLL-PIKPGEKVP-----NPSKMRVDLRFYAELISVG 181
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGLPLSGPGQEIYEE 179
I + + + LT + + NL+++ SF + G + GL + + ++
Sbjct: 182 IFPNKTGLPLLGACLTGL--IAQDKEEHVNLSIVLSFCKHCGDEYAGL-VPSRMTALAKK 238
Query: 180 FFKGLNITA----DQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSE 235
+ + ++ D++ + YY ++ E L+ EH L+ E K+L +KGE++
Sbjct: 239 YGVPMPVSPLLPPDRQGNLRNLLRDYYQSLAEHLRTEHKQLQLAEKSRRKMLQSKGEVTA 298
Query: 236 ENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASGKDSSVP 295
E +L+ SY+ L+ + +LA+ L E++ G + + G+
Sbjct: 299 EKREQLAQLQASYEKLHASTGTLADLLGEP-LPELEELLEPGTPGGIEGAVLDGRAGEEL 357
Query: 296 E----PVWDDEETRAFYECL----PDLRAFVPAV 321
+ W DEET++FY+ PD+ A P +
Sbjct: 358 QFGNLDPWRDEETKSFYDSEGALDPDMSAAGPPI 391
>gi|255076445|ref|XP_002501897.1| predicted protein [Micromonas sp. RCC299]
gi|226517161|gb|ACO63155.1| predicted protein [Micromonas sp. RCC299]
Length = 1236
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 147/364 (40%), Positives = 215/364 (59%), Gaps = 13/364 (3%)
Query: 424 RKVETEKEKLKGVEGTN------LDALLQRLPGCVSRDLIDQLTVEFCYLNSK-SNRKRL 476
RK+E EK + +DAL+ RLPGCV +D D V+ CY+N+ S R+R
Sbjct: 505 RKLEKEKSDAEADAAVGKDHAQKVDALMSRLPGCVMKDDADAFAVDLCYVNATPSTRRRA 564
Query: 477 VRALFNVPRTSLELLPYYSRMVATLSTC-MKDVSSMLIQMLEEEFNFLI--NKKDQMNIE 533
V+ L +VPR + +P+Y+R+ A L + D+ + + EEF L + D E
Sbjct: 565 VQELVSVPRGDVHKIPHYARIAAALGQVFVADIRGPVSHAIREEFWVLSREGRGDVPTFE 624
Query: 534 TKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETS 593
+++N RF+GEL KF++ A F ++ L+ F N+DVAC L+ETCG FL R PET+
Sbjct: 625 HRLKNARFLGELVKFRMVTAPEAFEAIRWLLERFGGQNVDVACTLIETCGSFLARLPETA 684
Query: 594 IRMANMLEILMRLK-NVKNLDPRHVTLVENAYYLCKPPERSARVSKVR--PPLHQYIRKL 650
RMA +L++ +RLK + K LD R + ++ A+ C+P AR + + PP H+Y+R L
Sbjct: 685 ARMAAILDVFVRLKGSTKGLDSRQIARIDAAHASCRPKSERARSRRTKRRPPTHEYVRHL 744
Query: 651 LFSDLDKSSIEHVLRQLRKLPWSDCESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDE 710
+F LD+ ++ V RQLRKLPW+ E Y+++ +K HK +YG IA L A L++
Sbjct: 745 VFRVLDEKTLPQVNRQLRKLPWATHERYVVRTLLKSHKNRYGASPWIAQLVAALAKGKPS 804
Query: 711 FAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
F V +D +LEEIR GLE N M QRRLA R LGE+Y + V+++ IF LYL++ FG
Sbjct: 805 FGVRTIDSLLEEIRFGLETNAPWMHQRRLAAARLLGEMYKAKVVNTTTIFSQLYLLISFG 864
Query: 771 HGTA 774
H A
Sbjct: 865 HSAA 868
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 138/297 (46%), Gaps = 36/297 (12%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRN-----------------LKA 103
+ + S LH Y+DF+P L + L + P A +
Sbjct: 190 VDVVSKLHAMYEDFAPALAESLPRFVCPNAKAFAPSAAAALAAKEAATAAGLDAAEVVTP 249
Query: 104 MKKRSTLKLLLELYFIGIIEDSSIFINIIKDLTSIEHL-KDRDTTQTNLTLLASFAR-QG 161
+++R L+LL EL+ +G++ + + +L +E L D D +LT LA FAR G
Sbjct: 250 LQRRLKLRLLAELHLVGVVPSAGSLHKCVAELAKVESLVDDPDAYAHSLTTLAQFARVYG 309
Query: 162 RIFLGLPLSGPGQEIYEEFFKGLN---ITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQ 218
+LG+ S E + G + + +Q+ F+ +Y + L H SL +
Sbjct: 310 EEYLGVEQSETSPEKAGDSEPGASSYRLKPEQQAAFRSCLAGFYARSCDALVDAHRSLCE 369
Query: 219 MENENAKILNAKGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTR- 277
+E NA+ L GEL +S +Y +++ D L++NV+SLAE L + P +PE V R
Sbjct: 370 IERSNARRLERTGELPAADSEAYADAKRTRDFLHKNVTSLAEDLRERYPTLPEYVEKERE 429
Query: 278 -------VTSGEDASPASGKDSSVPEPVWDDEETRAFYECLPDLRAFVPAVLLGEAE 327
+ G D P + +WDDEE + FYE LPDLRA VPAVLL + E
Sbjct: 430 KDRGEVELQRGVDVGPGDWR------ALWDDEEQKIFYEDLPDLRATVPAVLLPKEE 480
>gi|195049096|ref|XP_001992652.1| GH24090 [Drosophila grimshawi]
gi|193893493|gb|EDV92359.1| GH24090 [Drosophila grimshawi]
Length = 1353
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 139/333 (41%), Positives = 208/333 (62%), Gaps = 3/333 (0%)
Query: 441 LDALLQRLPGCVSRDLIDQLTVEFCY-LNSKSNRKRLVRALFNVPRTSLELLPYYSRMVA 499
D L L CV+++LID +EF N+K+ R++L R +F+V RT L++LPY SR VA
Sbjct: 592 FDVFLLNLFNCVNKELIDSAAIEFLLNYNTKNQRRKLTRTIFSVQRTRLDILPYLSRFVA 651
Query: 500 TLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSC 559
+ C DV++ L ++L +EF + I KK+Q+NIE+K++ +RFIGEL KF + C
Sbjct: 652 IVHMCNTDVAADLSELLRKEFKWHIRKKNQLNIESKLKIVRFIGELVKFGLFKKFDALGC 711
Query: 560 LKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTL 619
LK L DF HH+I++AC +E G +LY ++ + M L+ ++R+K +D RH
Sbjct: 712 LKMLLRDFIHHHIEMACAFVEVSGIYLYNCRDSRLLMNVFLDQMLRMKTATVMDSRHAAQ 771
Query: 620 VENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE--S 677
+E+ YYL KPPE + R RPPLH+YIR L+F L K ++EH ++ LR++ W D E
Sbjct: 772 IESVYYLVKPPESAKREVTPRPPLHEYIRHLIFERLCKQNVEHCIKMLRRINWHDPEISG 831
Query: 678 YLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQR 737
Y +KC K + ++ I +A L +GLS Y V+D V E+IR GLE++ M QR
Sbjct: 832 YAIKCLSKAYLLRFPLIRCLADLVSGLSSYQPRAVTIVIDNVFEDIRAGLEIHSPKMSQR 891
Query: 738 RLAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
R+A ++LGE+YNY+ V+S+ I +TLY I+ G
Sbjct: 892 RIAMAKYLGEMYNYKLVESTHILNTLYSIISLG 924
>gi|339235961|ref|XP_003379535.1| putative MIF4G domain protein [Trichinella spiralis]
gi|316977777|gb|EFV60834.1| putative MIF4G domain protein [Trichinella spiralis]
Length = 1099
Score = 281 bits (720), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 216/746 (28%), Positives = 369/746 (49%), Gaps = 52/746 (6%)
Query: 57 LVYFLKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLEL 116
++ +++CSL HQRY DFS L+D + F S D N+ K R L+ L+EL
Sbjct: 113 IIPLIELCSLAHQRYADFSGFLLDYFKRTF----SSSDSKVATNMS--KLRVDLRFLVEL 166
Query: 117 YFIGII---EDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGL---PL 169
GI+ E + + ++ + +T +E ++ T L+ L SF RQ G LGL
Sbjct: 167 LLHGILTEKEAAPVLLDAVTIITRLE----KERKFTFLSTLVSFCRQCGEDLLGLLPRNF 222
Query: 170 SGPGQEIYEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNA 229
Q+ ++ I+ + ++ YYNA+ + + L +M +N + + +
Sbjct: 223 RTVAQQKKIDYHCSDLISEELREKLMMKVKAYYNALIVHVSGLNGELLKMRQKNMRQMES 282
Query: 230 KGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASG 289
KGE+ ++E+L+ + D L +++++LA LD+ P +P++ T SGE +
Sbjct: 283 KGEVHPAAVRNFEELKSTLDKLIQSMNTLANWLDVDTPHLPDEA--TLEESGESIQKSVV 340
Query: 290 KDSSVPEPV---WDDEETRAFYECLPDLRAFVPAVLLGEAE-HKANEPSVKPLEQPTDPA 345
SS ++DEE+R FY LP L+ +P +L +A+ ++ N S K +E
Sbjct: 341 SKSSEESQSESPFEDEESRLFYTSLPQLKEMLPQILFQDAQKNQENFSSEKDMEAMRALE 400
Query: 346 SEPDQGQLAAQDTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKD----K 401
E + Q+ Q + L + V+ +E + E D D+ D
Sbjct: 401 KEMSE-QMKKQSRIIIIIHLNCKRKPLQVD-----DELKMENQNDVDQSSVSYTDVDGMS 454
Query: 402 EEKDKEKAKDP--DKEKGKEKDTERKVETEKEKLKGVEGT--NLDALLQRLPGCVSRDLI 457
EE + + +D E K + K E + E V + + + + +LP ++RD+I
Sbjct: 455 EETNTAELEDECVKSENCKSVNNGEKSEEDHEDSSNVSSSILQMKSFIAKLPLLINRDMI 514
Query: 458 DQLTVEFC-YLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQML 516
DQ +E+ +LN+KSNR+RL++ LF V R+ L+LLP+YSR++A L D+ + + +L
Sbjct: 515 DQAAIEYATHLNTKSNRRRLIKTLFEVHRSRLDLLPFYSRLIAILDPVFPDIRNEICHLL 574
Query: 517 EEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVAC 576
+F I KKDQ+ IE+K++ R+IGEL KF I P C K L DF HHNI++AC
Sbjct: 575 ISQFRHHIRKKDQVQIESKVKVCRYIGELVKFGIFPKSDALLCFKLLLMDFRHHNIEMAC 634
Query: 577 NLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARV 636
+L++ G +L+ S ++ ++M +LE + R LD R+ ++ NAYY C P V
Sbjct: 635 AILDSSGYYLFHSSDSHLKMKFLLEQMKRRAETLYLDFRYQGMIMNAYYTCYPESVQPIV 694
Query: 637 SKVR----PPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE---SYLLKCFMKVHKG 689
P + +YI L+ + +E VL++++K+ WSD + ++H+
Sbjct: 695 ESCDQVEVPIVFKYIWHLVSNRTVLKEVEFVLKEMQKIDWSDANVRTVAIASTVFQLHRK 754
Query: 690 KYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELY 749
+ + S ++ V D VLE R LE + QQ+R++ ++GELY
Sbjct: 755 RAVWYCRVLSHRRSSCKF-------VADNVLEIFRSSLESDSMLNQQQRMSLCMYMGELY 807
Query: 750 NYEHVDSSVIFDTLYLILVFGHGTAE 775
NY+ +++S F +LYL+L + E
Sbjct: 808 NYKLINTSAYFSSLYLLLTLNVESVE 833
>gi|335307948|ref|XP_003361040.1| PREDICTED: regulator of nonsense transcripts 2-like, partial [Sus
scrofa]
Length = 565
Score = 279 bits (713), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 133/249 (53%), Positives = 173/249 (69%), Gaps = 2/249 (0%)
Query: 524 INKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCG 583
+ KKDQ+NIETK + +RFIGEL KFK+ CLK L DF+HH+I++AC LLETCG
Sbjct: 1 VRKKDQINIETKNKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCG 60
Query: 584 RFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPL 643
RFL+RSPE+ +R + +LE +MR K +LD R+VT+VENAYY C PP V K RPPL
Sbjct: 61 RFLFRSPESHLRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPL 120
Query: 644 HQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLT 701
+Y+RKLL+ DL K + E VLRQ+RKLPW D E Y++ C + + KY IH +A+L
Sbjct: 121 QEYVRKLLYKDLSKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLL 180
Query: 702 AGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFD 761
AGL Y ++ + VVD VLE+IRLG+E+N QRR++ +FLGELYNY V+S+VIF
Sbjct: 181 AGLVLYQEDVGIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFR 240
Query: 762 TLYLILVFG 770
TLY FG
Sbjct: 241 TLYSFTSFG 249
>gi|353234309|emb|CCA66335.1| related to NMD2-Nonsense-mediated mRNA decay protein 2
[Piriformospora indica DSM 11827]
Length = 710
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 173/478 (36%), Positives = 244/478 (51%), Gaps = 58/478 (12%)
Query: 299 WDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDT 358
++DEE R FYE L DL+ +VP L E A + E D G+L
Sbjct: 277 FEDEEDRKFYEDLMDLKDWVPRSFLNVPEEDAASSAATDAE-----GENADIGRLT---- 327
Query: 359 AEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGK 418
DLG + SV E ++ P E D A P +
Sbjct: 328 -----DLGGEADEDSV--------YEAPTSRSPSPVT-------EVDASVAPGPSQA--- 364
Query: 419 EKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVR 478
L +L +LP SRD IDQ EF ++NSK+ RKRLV+
Sbjct: 365 ----------------------LTVILGKLPDATSRDSIDQAATEFMFVNSKAARKRLVK 402
Query: 479 ALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMN--IETKI 536
L + P+ +L+PYY R+VAT+S D+S L++ LE+EF +L KK + +
Sbjct: 403 FLMSSPKQRTDLIPYYGRLVATVSKYAPDLSKELLEALEDEFRYLQRKKKVVKELASMRT 462
Query: 537 RNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRM 596
+NI + L KF + P ++ + LDD + N+D LLE CGRFL R +T +
Sbjct: 463 KNITWFSVLTKFHLVPPHVILHIFRVFLDDLSGTNVDSLATLLEGCGRFLLRGSDTGKKT 522
Query: 597 ANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLD 656
A ML+++ R ++++ D R + L+ENAYY C PPER K R + +IR LL L
Sbjct: 523 AEMLDLMKRKQSLQKFDQRQILLLENAYYQCNPPERGPIEHKQRSTIELFIRHLLCDVLT 582
Query: 657 KSSIEHVLRQLRKLPWSDCES--YLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVA 714
+ S+++VL+ LRKL W D E+ L K F K K + I L+A L L RYH +F V
Sbjct: 583 RKSLDNVLKLLRKLNWDDTETERVLFKMFTKPWKVSFSTITLMAILAYDLQRYHSKFCVD 642
Query: 715 VVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHG 772
VVD+V+E IRLG+E N Y Q+R+A +++LGELY Y V+S VIFDTL+ ++ FGH
Sbjct: 643 VVDQVMENIRLGMEQNIYKNNQKRVATVKYLGELYIYRLVNSRVIFDTLWSLVTFGHS 700
>gi|290985373|ref|XP_002675400.1| predicted protein [Naegleria gruberi]
gi|284088996|gb|EFC42656.1| predicted protein [Naegleria gruberi]
Length = 973
Score = 276 bits (706), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 154/370 (41%), Positives = 230/370 (62%), Gaps = 33/370 (8%)
Query: 428 TEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQL--TVEFCYLNSKSNRKRLVRALFNVPR 485
+K +L+ + +++ LL +LP R ID+L T+ YLN K NR +LV+ +F+V R
Sbjct: 327 NDKNELENI--VSMEDLLDKLP---KRPPIDKLATTLAIKYLNQKGNRTKLVKKMFSVNR 381
Query: 486 TSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGEL 545
TSLELLPYYSR++A L+ KDV L+Q LEEEFN L ++DQ+ IETK++NIRF+GEL
Sbjct: 382 TSLELLPYYSRLIAILNPLFKDVGKSLVQSLEEEFNKLFEEQDQIKIETKVKNIRFLGEL 441
Query: 546 CKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMR 605
FKI P LK CL F HHNIDVAC+ LE CGR+LY + + M ++ +MR
Sbjct: 442 ILFKICPEETGIEFLKKCLSQFHHHNIDVACHFLEVCGRYLYAQSTSHLLMVELISKMMR 501
Query: 606 LKNVKNLDPRHVTLVENAYY-----LCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSI 660
+K++K LD ++ T++++AYY + + E+ V L QY+ LL S+L+K +I
Sbjct: 502 IKDIKVLDVKYNTMIDSAYYNTVVNVDQEVEKPRTVFGEDDELTQYVLHLLLSELNKYNI 561
Query: 661 EHVLRQLRKLPWSDCESY--LLKCFMK-VHKGKYGQIHLIASLTAGLSRYHDEFAVAVVD 717
VL+QLRKLP+ D + ++K + + + +G IHL+AS+ GLSRYH+E V ++D
Sbjct: 562 NTVLKQLRKLPYDDFDRIKNIIKSILSHIRECAFGTIHLMASVLGGLSRYHEEIGVVIID 621
Query: 718 EVLEEIR------------LGLELNDYGM------QQRRLAHMRFLGELYNYEHVDSSVI 759
+LEEIR LG+ N + +Q+R+ ++FLGE YNY+ +D +VI
Sbjct: 622 LLLEEIRYSLQQEYIDNIELGINQNAEYIPSRLRSEQKRIIDIKFLGEFYNYQLLDINVI 681
Query: 760 FDTLYLILVF 769
D LY ++++
Sbjct: 682 MDVLYTLILY 691
>gi|58268284|ref|XP_571298.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|57227533|gb|AAW43991.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1169
Score = 275 bits (704), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 149/368 (40%), Positives = 220/368 (59%), Gaps = 26/368 (7%)
Query: 429 EKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSL 488
E++ L+ L AL LP +R+++D+L VEF +LNSK+ RKRL++ + VP+
Sbjct: 510 EEDGLQSGPAARLSALFAALPESNNREVVDKLAVEFAFLNSKAARKRLIKFIGEVPKQRT 569
Query: 489 ELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIE-TKIRNIRFIGELCK 547
+LLP+YSR++ATL+ M DV + ++ +L+EE +L KK ++ T+++N+RF GEL K
Sbjct: 570 DLLPHYSRLIATLNPYMPDVGAGILDILDEELRYLQRKKLVRELDSTRLKNVRFYGELAK 629
Query: 548 FKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYR------------------- 588
FK+A + LK LDDF NI+ NLLETCGRFL R
Sbjct: 630 FKVAKPFNILHVLKVFLDDF-KFNIENISNLLETCGRFLLRYEGTAEVAKRMVGVFARFV 688
Query: 589 ---SPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQ 645
+PE + M + +E++ + + +LD RH ++ENA+Y+C PPER R P+
Sbjct: 689 NSSNPEVWLNMISQVELMRKKQANMHLDQRHQLMLENAFYMCNPPERIVREVVQLTPMQS 748
Query: 646 YIRKLLFSDLDKSSIEHVLRQLRKLPWSDCESY--LLKCFMKVHKGKYGQIHLIASLTAG 703
+IR LL L K + + VL+ LRKL W D E Y +L F V + K+G I +A L
Sbjct: 749 FIRHLLDEVLMKRTHDKVLKLLRKLHWEDPEVYGFILSAFTNVWEVKFGNIPQLADLVFD 808
Query: 704 LSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTL 763
L R+H EF +AVVD+VLE IR+ +E N + QRR+A M+++GELY Y + +SVIF+ L
Sbjct: 809 LQRWHPEFGIAVVDQVLENIRIDMEENIFKFNQRRIATMKYVGELYMYRVISASVIFEIL 868
Query: 764 YLILVFGH 771
+ +L FGH
Sbjct: 869 WSLLSFGH 876
>gi|134113230|ref|XP_774640.1| hypothetical protein CNBF3200 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257284|gb|EAL19993.1| hypothetical protein CNBF3200 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1169
Score = 275 bits (702), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 149/368 (40%), Positives = 220/368 (59%), Gaps = 26/368 (7%)
Query: 429 EKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSL 488
E++ L+ L AL LP +R+++D+L VEF +LNSK+ RKRL++ + VP+
Sbjct: 510 EEDGLQSGPAARLSALFAALPESNNREMVDKLAVEFAFLNSKAARKRLIKFIGEVPKQRT 569
Query: 489 ELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIE-TKIRNIRFIGELCK 547
+LLP+YSR++ATL+ M DV + ++ +L+EE +L KK ++ T+++N+RF GEL K
Sbjct: 570 DLLPHYSRLIATLNPYMPDVGAGILDILDEELRYLQRKKLVRELDSTRLKNVRFYGELAK 629
Query: 548 FKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYR------------------- 588
FK+A + LK LDDF NI+ NLLETCGRFL R
Sbjct: 630 FKVAKPFNILHVLKVFLDDF-KFNIENISNLLETCGRFLLRYEGTAEVAKRMVGVFARFV 688
Query: 589 ---SPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQ 645
+PE + M + +E++ + + +LD RH ++ENA+Y+C PPER R P+
Sbjct: 689 NSSNPEVWLIMISQVELMRKKQANMHLDQRHQLMLENAFYMCNPPERIVREVVQLTPMQS 748
Query: 646 YIRKLLFSDLDKSSIEHVLRQLRKLPWSDCESY--LLKCFMKVHKGKYGQIHLIASLTAG 703
+IR LL L K + + VL+ LRKL W D E Y +L F V + K+G I +A L
Sbjct: 749 FIRHLLDEVLMKRTHDKVLKLLRKLHWEDPEVYGFILSAFTNVWEVKFGNIPQLADLVFD 808
Query: 704 LSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTL 763
L R+H EF +AVVD+VLE IR+ +E N + QRR+A M+++GELY Y + +SVIF+ L
Sbjct: 809 LQRWHPEFGIAVVDQVLENIRIDMEENIFKFNQRRIATMKYVGELYMYRVISASVIFEIL 868
Query: 764 YLILVFGH 771
+ +L FGH
Sbjct: 869 WSLLSFGH 876
>gi|308802760|ref|XP_003078693.1| MIF4G domain-containing protein (ISS) [Ostreococcus tauri]
gi|116057146|emb|CAL51573.1| MIF4G domain-containing protein (ISS), partial [Ostreococcus tauri]
Length = 936
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 152/389 (39%), Positives = 226/389 (58%), Gaps = 12/389 (3%)
Query: 419 EKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVR 478
E +TER ++ EKE + L L+ RL C+S+D D + +FCY+ ++ RKRL++
Sbjct: 296 ESETER-LKREKEDITEGRTAKLQGLILRLSDCMSKDKADSICTDFCYIGARGGRKRLIQ 354
Query: 479 ALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRN 538
NV R+ ++ +P+Y RM+ATL D++ + + L+E+F++L+ K + N+ +++N
Sbjct: 355 EFLNVRRSEIDRIPFYGRMIATLGAVFDDIAPTVSKALKEDFDYLMKKGTRANLGERLKN 414
Query: 539 IRFIGELCKFK-IAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMA 597
I FIGEL KF I VF +K +DDF N+DV C+L + G +L R+ TS RM
Sbjct: 415 IIFIGELVKFGMITDLSTVFEVIKLLVDDFHGDNVDVLCSLFDVAGYYLTRTQTTSKRMG 474
Query: 598 NMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDK 657
++L+I +RLK V LD R LV++AYY C+P + + V K RPP+ +YIR L+FS L K
Sbjct: 475 SILDIFLRLKAVSQLDARQCALVDSAYYKCRPVQ-TIIVRKTRPPMQEYIRDLIFSQLSK 533
Query: 658 SSIEHVLRQLRKLPWSDCESYLLKCFMKVHKGKYGQIHLIASLTA-GLSRYHDEFAVAVV 716
++E V QLRKLPW + E YL+K +KV K ++ + +A+ AV +
Sbjct: 534 RTLEKVATQLRKLPWDETEEYLVKKLLKVCKLRHSSVPAVAAADCKSCPSSIPTLAVRCL 593
Query: 717 DEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHGTAET 776
D VLE++R GLE+N+ M QRR+A+MR L LY I DTLYLI+ G+ E
Sbjct: 594 DAVLEDVRFGLEVNETWMHQRRVANMRLLACLYKERVSHFREILDTLYLIISIGYDGREA 653
Query: 777 YWTHQKIVSGSGWLLLFLRLVVTTLTEAL 805
K G + LR+V T L AL
Sbjct: 654 -----KDYPGD---TIRLRMVCTLLENAL 674
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 110/220 (50%), Gaps = 12/220 (5%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLD-ADRNLKAM----KKRSTLKLLLE 115
++I S +HQ Y DF+ L + L P + L A+ ++A+ ++R L+L LE
Sbjct: 45 VEIISCMHQTYADFAAPLEEALRAYVVPPRPETLLKMAEGEIEALPSALQRRIKLRLFLE 104
Query: 116 LYFIGIIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQGRI-FLGLPLSGPGQ 174
L+ +G+ ++++K+L +E+ D Q L+ L+SFA+ + LG + P
Sbjct: 105 LHIVGVCPKVKPVLDVVKELARLEYKIAPDLYQHTLSTLSSFAKTFAVEMLG---AEPEF 161
Query: 175 EIYEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELS 234
E +E F + AD ++ FK + Y + + +L ++ + E E A++L G +S
Sbjct: 162 ETNDEDFV---LPADVQQEFKSTLNEYCDRLFLVLMEAFFAMTEQEREIARLLERTGAVS 218
Query: 235 EENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVH 274
E S + L K +D L + ++LAE L + P M + V
Sbjct: 219 ESASVEFAALTKVFDGLLKGATTLAETLGRELPEMKKKVE 258
>gi|322712451|gb|EFZ04024.1| nonsense-mediated mRNA decay factor (Upf2) [Metarhizium anisopliae
ARSEF 23]
Length = 1169
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 143/338 (42%), Positives = 204/338 (60%), Gaps = 34/338 (10%)
Query: 438 GTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRM 497
G +DALL RLP ++D+IDQ ++FC+LNSK++R RLV+AL VP+ +LLP +SR+
Sbjct: 469 GAQVDALLARLPELTNKDVIDQTAIDFCFLNSKASRNRLVKALTEVPKGRSDLLPSWSRL 528
Query: 498 VATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNI-ETKIRNIRFIGELCKFKIAPAGLV 556
VATL M DV L+ L+ EF L +K++ + + ++ NIR++ EL KF + P +V
Sbjct: 529 VATLGRYMPDVPKGLVDYLDAEFRSLQRRKEKDFLGQVRLSNIRYLAELTKFGVVPEHVV 588
Query: 557 FSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRH 616
F CLK LDDF+ NI++ CNL+E CGR+L ++PET+ RMA+ LE L R K+V+++
Sbjct: 589 FHCLKVSLDDFSRMNIEILCNLIENCGRYLLKNPETAPRMASFLETLQRKKSVQHIGQPE 648
Query: 617 VTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE 676
L++NA Y PPER A K R P+ +I KL++SD+ K + +L+Q+R+L W + E
Sbjct: 649 RMLIDNAVYYVDPPERPAIEQKERTPMELFIAKLVYSDMTKRNYSKILKQIRRLHWEETE 708
Query: 677 --SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGM 734
S L K F K K KYG IHL+ L + + RYH EF V V+D V+E +
Sbjct: 709 VVSILEKVFSKPGKVKYGNIHLLGILLSAIYRYHPEFVVKVIDNVIEML----------- 757
Query: 735 QQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHG 772
EH VIFDT+Y IL FG+G
Sbjct: 758 -----------------EH---PVIFDTMYKILTFGYG 775
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 11/157 (7%)
Query: 184 LNITADQKKI--------FKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSE 235
LN T DQ+ F+K Y++ V + + S++ NA+ GE+ E
Sbjct: 271 LNQTLDQQPFTPPDMAERFRKVLKKYFDDVAAHILRDQKSIQSQARRNAEAYVKSGEVFE 330
Query: 236 ENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASG---KDS 292
+ ++YEK K+ + L N +A+A+ + P + E +SG + +
Sbjct: 331 DRQANYEKQVKAQERLISNAQVIADAIGAEMPDLKESYDALATSSGSIGLVKTSEYLRTM 390
Query: 293 SVPEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHK 329
+W DE+ R FYE L DL+ VP +LL + K
Sbjct: 391 GEGAGIWTDEDERRFYENLVDLKGKVPPILLEDGRRK 427
>gi|219129779|ref|XP_002185058.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403553|gb|EEC43505.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 1477
Score = 270 bits (689), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 144/340 (42%), Positives = 207/340 (60%), Gaps = 12/340 (3%)
Query: 444 LLQRLPGCVSRDLIDQLTVEFC--YLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATL 501
L + LP C R+ +D+LT +FC + +SK++RKRL R LF VPR+ L+LLPYYSRM AT+
Sbjct: 628 LEEELPECHRREQLDELTEKFCTNHGSSKNSRKRLSRTLFLVPRSRLDLLPYYSRMAATV 687
Query: 502 STCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLK 561
D++S L+ LE +F+ K NIE++++ R+IGEL KF++AP + CLK
Sbjct: 688 DRVWTDIASPLVADLEHQFHGQAKFKKNQNIESRMKTARYIGELTKFRVAPPIVFLRCLK 747
Query: 562 ACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVE 621
CL+DFT +N+DV C LLE+CGRFL+R TS R+A ++E + RL KNLD RH +L++
Sbjct: 748 RCLEDFTGNNVDVTCCLLESCGRFLFRLKHTSGRIATLMETITRLSKAKNLDERHQSLIQ 807
Query: 622 NAYYLCKPPERSAR-VSKVRPPLHQYIRKLLFSDLD--KSSIEHVLRQLRKLPWSD---- 674
A+Y KPP R K PPL Y+R LL L+ +S+ ++L +LPWSD
Sbjct: 808 AAFYAVKPPPSGPRKQQKEYPPLEAYVRYLLMVRLEPTDTSVSFTAKELIRLPWSDPEQQ 867
Query: 675 CESYLLKCFMKV-HKGKYGQIHLIASLTAGL--SRYHDEFAVAVVDEVLEEIRLGLELND 731
C + + + +K KG+Y I+ IA++ L R E V +VD +LEE+R LE D
Sbjct: 868 CGALVCRIMLKACRKGRYRTIYAIAAVADRLRPQRSACEAPVRLVDALLEELRWALEHPD 927
Query: 732 YGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
+ QQR + + R LGELY V ++ + LY + GH
Sbjct: 928 FRDQQRTITYARLLGELYCSSQVTGQLVINQLYDFINIGH 967
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 120/312 (38%), Gaps = 54/312 (17%)
Query: 57 LVYFLKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKK--RSTLKLLL 114
L L + + +HQRY+DF L+ L KV + AM K R +++L
Sbjct: 259 LPSVLSLVTTMHQRYEDFLSMLVPALWKVVNA----------KPTPAMAKLRRLYVRILT 308
Query: 115 ELYFIGIIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQG----------RIF 164
EL GI+ ++ I + D + + + + + L+ +F++ +
Sbjct: 309 ELVLNGIVTETKPLIACVTDASGANASQGTNCSVQDANLMVAFSKAAGFELLDIVPTSVH 368
Query: 165 LGLPLSG-----------------PGQEIYEEFFKGLN----------ITADQKKIFKKA 197
+ L G P Q++ ++ + + + A ++
Sbjct: 369 SAIKLIGNYNETEACTPDGADAIFPSQDVIKQAYPVVEQIPSVLTERAVAAQVSEVLVTH 428
Query: 198 FHTYYNAVQELLQAEHTSLRQMEN--ENAKILNAKGELSEENSSSYEKLRKSYDHLYRNV 255
Y+A+ L H L Q+E E ++L+ G L+E RK + L + V
Sbjct: 429 CRAAYHALSTNLTQTHRKLLQLEKRCEQDRLLS--GSLTEAREKGLVDARKLQESLQKAV 486
Query: 256 SSLAEALDMQPPVMPEDVHTTRV-TSGEDASPASGKDSSVPEPVWDDEETRAFYECLPDL 314
+LA+ LD + P++ + SG G D +DDEE R FY +PDL
Sbjct: 487 DALADVLDERLPILQQQEEDGDADGSGGLEVWTKGTDGEEDLGPFDDEEMRTFYCDVPDL 546
Query: 315 RAFVPAVLLGEA 326
P LLG A
Sbjct: 547 LTTTPPALLGLA 558
>gi|405121379|gb|AFR96148.1| hypothetical protein CNAG_05829 [Cryptococcus neoformans var.
grubii H99]
Length = 1165
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 147/374 (39%), Positives = 217/374 (58%), Gaps = 32/374 (8%)
Query: 429 EKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSL 488
E++ L+ L AL LP +R+++D+L VEF +LNSK+ RKRL++ + VP+
Sbjct: 490 EEDGLQSGPAARLSALFAALPESNNREVVDKLAVEFAFLNSKAARKRLIKFIGEVPKQRT 549
Query: 489 ELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKK-----DQMNIETKI------- 536
+LLP+Y+R++ATL+ M DV + ++ +L+EE +L KK D ++ +
Sbjct: 550 DLLPHYARLIATLNPYMPDVGAGILDILDEELRYLQRKKLVRELDSTRLKVGLLFFPHTF 609
Query: 537 -----------------RNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLL 579
+N+RF GEL KFK+A + LK LDDF NI+ NLL
Sbjct: 610 NMAKLINFFFFFVLAFPQNVRFYGELAKFKVAKPFNILHVLKVFLDDF-KFNIENISNLL 668
Query: 580 ETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKV 639
ETCGRFL R T+ M+E++ + + +LD RH ++ENA+Y+C PPER R
Sbjct: 669 ETCGRFLLRYEGTAEVAKRMVELMRKKQANMHLDQRHQLMLENAFYMCNPPERVVREVVQ 728
Query: 640 RPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCESY--LLKCFMKVHKGKYGQIHLI 697
P+ +IR LL L K + + VL+ LRKL W D E Y +L F V + K+G I +
Sbjct: 729 LTPMQSFIRHLLDEVLMKRTRDKVLKLLRKLHWEDPEVYGFILSAFTNVWEVKFGNIPQL 788
Query: 698 ASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSS 757
A L L R+H EF +AVVD+VLE IR+ +E N + QRR+A M+++GELY Y +++S
Sbjct: 789 ADLVFDLQRWHPEFGIAVVDQVLENIRIDMEENIFKFNQRRIATMKYVGELYMYRVINAS 848
Query: 758 VIFDTLYLILVFGH 771
VIF+ L+ +L FGH
Sbjct: 849 VIFEILWSLLSFGH 862
>gi|320169205|gb|EFW46104.1| hUPF2 [Capsaspora owczarzaki ATCC 30864]
Length = 1285
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 142/349 (40%), Positives = 209/349 (59%), Gaps = 8/349 (2%)
Query: 435 GVEGT-NLDALLQRLPGCVS-RDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLP 492
G GT +LD L+Q L C R ID++ +FCY+NS +NR+RLV +L +L+P
Sbjct: 587 GGNGTEDLDGLMQALIACAGDRSAIDEIATQFCYMNSNANRRRLVTSLLAQAERRADLIP 646
Query: 493 YYSRMVATLSTCMKDVSSMLIQMLEEEF-NFLINKKD-QMNIETKIRNIRFIGELCKFKI 550
+ R++ATL+ M DVS+M++ +LE+ +L + +D E + I+F+GEL KF +
Sbjct: 647 AFCRLIATLNQVMPDVSAMVLLLLEDRIPKYLYHPRDGPYEAERRFGTIKFMGELVKFGV 706
Query: 551 APAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLK-NV 609
+ + DF+ H I + C LETCGRFLYRSP+++ RM ++L+I+MR + ++
Sbjct: 707 CSRKTALDVFQIFVADFSAHGIPLMCRYLETCGRFLYRSPQSAKRMESLLQIMMRKRISL 766
Query: 610 KNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRK 669
KNL ++ A+ C PPE V RPP QY++ L+ + L + E VL QLRK
Sbjct: 767 KNLAELLCGQIDEAFARCNPPEAVKVVKVPRPPEQQYVKHLIRTVLGPETTERVLAQLRK 826
Query: 670 LPWSD---CESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLG 726
LPWS Y ++ + + KY + +AS+ AGLSR +D V VVD+VLE IRLG
Sbjct: 827 LPWSTDAPLRDYTIRLLAQPDRIKYSSLDSLASVIAGLSRRYDYVWVQVVDKVLESIRLG 886
Query: 727 LELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHGTAE 775
LE+N QRR+A +RFL ELYNYE ++ ++FDTLY ++ FG E
Sbjct: 887 LEVNLPQWNQRRVAVVRFLAELYNYELFEAPIVFDTLYRLITFGRNPYE 935
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 115/256 (44%), Gaps = 43/256 (16%)
Query: 102 KAMKKRSTLKLLLELYFIGIIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQG 161
K K R+ L+LL EL +G+ D+++ +K+L L+DR + T ++ G
Sbjct: 182 KIAKIRTALRLLGELIIVGVYPDAAVLGPPLKEL----FLRDRASLSLVATAVSFLKACG 237
Query: 162 RIFLGLPLSGPGQEIYEEFF-----------------------------KG--LNITADQ 190
GL + ++E+ F KG L + A++
Sbjct: 238 EELTGL-VPHKRALLFEKHFQHRAEDFPAAAAAAAAAAPGVAGAADSTNKGSPLAVPAEK 296
Query: 191 KKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDH 250
+ F+ F Y++ V + EH+++ ++ + L KGE++ YEK K ++
Sbjct: 297 QMRFRALFSDYFDLVVARAKEEHSAIAKLAQIQRQQLLNKGEVNAGTKEHYEKTTKMHER 356
Query: 251 LYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASGKDSSVPE--PVWDDEETRAFY 308
L +++SLA+ LD P P V +A+P + D P+W+D+ETR FY
Sbjct: 357 LLASLASLADQLDKPMPDFP-----VEVIPEPEAAPEAKMDKPKGSELPLWEDDETRMFY 411
Query: 309 ECLPDLRAFVPAVLLG 324
E + +LRA VPAVL
Sbjct: 412 ENMIELRAVVPAVLFA 427
>gi|361130893|gb|EHL02630.1| putative Regulator of nonsense transcripts 2 [Glarea lozoyensis
74030]
Length = 899
Score = 266 bits (679), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 173/584 (29%), Positives = 277/584 (47%), Gaps = 111/584 (19%)
Query: 194 FKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYR 253
F+ Y+ V+ + + ++ + ++A+ G++ E+ +SYEK KS + L
Sbjct: 283 FRNILKRYFEDVKAHIIRDQKAISKQARKDAEAYVKSGQVFEDRQASYEKGLKSQERLIS 342
Query: 254 NVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASG---KDSSVPEPVWDDEETRAFYEC 310
N L +A+ + P + + + +G +G + +W+DE+ R FYE
Sbjct: 343 NAQILGDAIGGEMPELKDTEDASATGTGGIGLVKTGEYLRGEGDGAGIWEDEDERRFYEN 402
Query: 311 LPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTAEVSADLGASPE 370
L DL
Sbjct: 403 L---------------------------------------------------VDLKGKVP 411
Query: 371 GKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEKDTERKVETEK 430
G +E GK +K D D++ GK K E + + DP K + ++
Sbjct: 412 GMMLEDGK-------KKKADTDEQVGK---KIEVSESISVDPAILAAKAAEEDQSTAIAN 461
Query: 431 EKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLEL 490
+ + G +DALL RLP ++DL+DQ ++FC+LNSK++R RL++A+ +P+ +L
Sbjct: 462 KTV----GAQVDALLARLPDLTNKDLVDQAAIDFCFLNSKASRNRLIKAVQEIPKGRSDL 517
Query: 491 LPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNI-ETKIRNIRFIGELCKFK 549
L YSR+VATL M D+ L+ L++EF L +K++ + + ++ NIR++ EL KF
Sbjct: 518 LSSYSRLVATLGKYMLDIPKGLVDHLDQEFRSLQRRKEKEFLGQARLGNIRYLAELTKFG 577
Query: 550 IAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNV 609
+ P ++F CLK L R K+V
Sbjct: 578 VVPEHVIFHCLKT----------------------------------------LKRKKSV 597
Query: 610 KNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRK 669
+++ + L+ENA Y PP R+A K R P+ +IRKL++ D++ + +L+Q+R+
Sbjct: 598 QHIGQQERMLIENAVYYVDPPIRAAIQQKERTPIDLFIRKLVYLDMNNRNYTKILKQIRR 657
Query: 670 LPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGL 727
L W + E + L K F K K KYG IHL+A L + L RYH +F ++D +LE I LGL
Sbjct: 658 LHWEETEVVAILEKVFSKPGKVKYGNIHLLAILVSALYRYHQDFVTIIIDNLLEYIVLGL 717
Query: 728 ELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
E ND+ QRRLA +++LGELYNY VD VIFDT+Y I+ +GH
Sbjct: 718 EQNDFKFNQRRLAEVKYLGELYNYRMVDHPVIFDTMYRIMTYGH 761
>gi|170588897|ref|XP_001899210.1| MIF4G domain containing protein [Brugia malayi]
gi|158593423|gb|EDP32018.1| MIF4G domain containing protein [Brugia malayi]
Length = 1051
Score = 261 bits (668), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 209/722 (28%), Positives = 335/722 (46%), Gaps = 80/722 (11%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
+ +C L Y +FS L K+ P K +DR K R ++LL EL G
Sbjct: 99 VTVCVHLSCYYSEFSSLLFMEFRKLL-PSKR-----SDRIQNPSKLRVDIRLLAELCLHG 152
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQGRI-FLGLPLSGPGQEIYEE 179
+ + ++ S L DR T N+ +L F + + LGL Q
Sbjct: 153 VFGKEGV--QLLGSAVSFLTLTDR-TEHINIPILLPFCKVMNVDLLGLHPYSMKQVASAA 209
Query: 180 FFK---GLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEE 236
K I+ D KK F + Y ++ E ++ + + Q+ + +G+ S E
Sbjct: 210 NIKLPETSVISVDYKKTFAQLLLDYRVSLVEHIKQDLFEMNQLLLSIKRQTRTRGDASAE 269
Query: 237 NSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASGKDSSVPE 296
+ + E++R Y+ + + L+E L ++ M E+ + +
Sbjct: 270 DRNHLEEIRARYEKILTSGIQLSEYLGVEMETMKEEQSEDEEEEVSALALSRALHEGTI- 328
Query: 297 PVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQ 356
VW DE+TR FYE +LR VPA+L E+E + + G++
Sbjct: 329 TVWPDEDTRQFYETRMELRQLVPAILFQESERRTLDLV---------------GGRIEDV 373
Query: 357 DTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKE-KAKDPDKE 415
D + + A + E+A+D + +G D EE + DP
Sbjct: 374 DLSGLDAIV--------------------EEAEDEGDDHSEGVDDEETKVDLNEMDPSLP 413
Query: 416 KGKEKDTERKVETEKEKLKGVEGTNLD----ALLQRLPGCVSRDLIDQLTVEFCY-LNSK 470
+ET K + G +L A +++LP ++RDLID+ ++F LN++
Sbjct: 414 VNH-------IETPK-----ISGQDLKLMMLAFMEQLPWLINRDLIDKAALDFVTNLNTR 461
Query: 471 SNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQM 530
+NRK+L + + R L+LLP+Y R+VATL M D++ L L ++F + K +
Sbjct: 462 NNRKKLCQMMLEQYRNRLDLLPFYGRLVATLEPVMPDLALELSHALLQQFRAAVQNKKRQ 521
Query: 531 NIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSP 590
++ KIR RFI EL KF I P G SCL+ L DF HNID+ C +++ G+FLYRS
Sbjct: 522 RVDWKIRCARFISELVKFGIIPKGEGLSCLRMVLFDFRGHNIDMCCAIIDAMGQFLYRST 581
Query: 591 ETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKL 650
++ +M +L ++M+ K + DPR L++NA+Y C PP + P +IR L
Sbjct: 582 DSHGKMKILLGVMMK-KRDRVSDPRQQMLIDNAFYTCIPPPVEEKPKSASDPFQDFIRYL 640
Query: 651 LFSDLDKSSIEHVLRQLRKLPWSD--CESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYH 708
+ S+L + +E +R LRKL WSD +Y ++C +Y + +ASL A LS H
Sbjct: 641 I-SNLSRYRMEITIRCLRKLDWSDPVYANYAVQCLSNPSLPRYNNVPYLASLIAALSSCH 699
Query: 709 DEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILV 768
D + V+D+ LE+IR+ LE+N + QR + + FLG+LYNY TLY ++
Sbjct: 700 DWIGIRVLDQTLEDIRIALEVNSPSLHQRTVLSVIFLGQLYNYS---------TLYQLIT 750
Query: 769 FG 770
FG
Sbjct: 751 FG 752
>gi|313243215|emb|CBY39872.1| unnamed protein product [Oikopleura dioica]
Length = 739
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 131/333 (39%), Positives = 198/333 (59%), Gaps = 3/333 (0%)
Query: 441 LDALLQRLPGCVSRDLIDQLTVEFCY-LNSKSNRKRLVRALFNVPRTSLELLPYYSRMVA 499
D ++ L +R+L+D EF LN+ NRKRL R ++ V R ++LLP+++R+ A
Sbjct: 88 FDVYMKSLMTIYNRELVDAAAQEFLLTLNTPVNRKRLPREIWKVDRRRVDLLPFFTRLAA 147
Query: 500 TLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSC 559
+L C ++ L L ++F + + KKDQ++ E KI+N R+IGE KF I +C
Sbjct: 148 SLKECAPKIADDLASYLLKDFRYHVRKKDQIHFEVKIKNARYIGEATKFGILSRSEATTC 207
Query: 560 LKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTL 619
LK + DF+ I++ C LLE+ GRFL+RSP++ + +LE L R KN KNLD R +
Sbjct: 208 LKILVIDFSIVAIEMICGLLESAGRFLFRSPDSHQKTKLLLEQLKRKKNSKNLDARLLAQ 267
Query: 620 VENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE--S 677
++NA Y C PP R + RP + +YI +LL+ L K ++ VL+Q RK+ W D E
Sbjct: 268 LDNAIYCCNPPTEVHREVEKRPTVQEYIHRLLYDLLSKRTVAFVLKQFRKMNWKDVEIRD 327
Query: 678 YLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQR 737
Y++ + K+ +H AS+ AG+S YH+E A+ +VD +LE+I+ +E D QR
Sbjct: 328 YIIDALSAGYNVKFSVVHCAASVLAGISEYHEEEAIEIVDNILEDIKATMEFPDPRFNQR 387
Query: 738 RLAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
RL +++L ELYNY+ V S VIF TLY + G
Sbjct: 388 RLIQVKYLAELYNYKMVSSEVIFTTLYSFITLG 420
>gi|119190397|ref|XP_001245805.1| hypothetical protein CIMG_05246 [Coccidioides immitis RS]
Length = 734
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 158/487 (32%), Positives = 246/487 (50%), Gaps = 61/487 (12%)
Query: 194 FKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYR 253
F+ Y + V++ + +H +L + NA+ GE+ E+ S++EK K+ + L
Sbjct: 303 FRNIMIKYLDDVKKHVVRDHKALAALSRRNAEAYVKSGEILEDRQSNFEKQSKAQEKLVS 362
Query: 254 NVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASG---KDSSVPEPVWDDEETRAFYEC 310
N L + L + P + E ++SG +G + +W+DEE R FYE
Sbjct: 363 NTQILCDILGSEMPELAEKEGLDSLSSGTIGLVKTGEYLRGQGEGPGIWEDEEERRFYEN 422
Query: 311 LPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTAEVSADLGASPE 370
L DL+ VPAVLL
Sbjct: 423 LVDLKGKVPAVLL----------------------------------------------- 435
Query: 371 GKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEKDTERKVETEK 430
E GK K+ + E+AK+ D + G E+K +E+ P + +E D + K
Sbjct: 436 ----EDGKKKKGEADEQAKNKDADLPNGVTSEDK-RERPGQPVESTPRETDDQSTAIVNK 490
Query: 431 EKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLEL 490
G +D LL RLP +D +DQL +EFC+LNSK++R RL++A+ +VP+ +L
Sbjct: 491 -----TVGAQVDTLLARLPELQHKDAVDQLALEFCFLNSKASRNRLIKAMQDVPKGRTDL 545
Query: 491 LPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNI-ETKIRNIRFIGELCKFK 549
LP Y+R+VATL + D+ LI L+EEF L +K + + + + NIR++ EL KF
Sbjct: 546 LPLYARLVATLGQYLPDIPQGLISYLDEEFRSLQRRKQKEFLGQVRTSNIRYLAELTKFG 605
Query: 550 IAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNV 609
+ P ++F C K LDDF+ NI++ NLLE CGR+L R+PET+ RMA+ LE L R K
Sbjct: 606 VVPEHVIFHCFKVSLDDFSRMNIEIIGNLLENCGRYLLRNPETAPRMASFLETLGRKKAA 665
Query: 610 KNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRK 669
++L + ++ENA Y PP R A K R P+ ++RKL++ D++K + +L+ +RK
Sbjct: 666 QHLGQQERMVLENAMYYVDPPPRPAIQQKERTPMELFVRKLVYLDMNKRNYPKILKSVRK 725
Query: 670 LPWSDCE 676
L W + E
Sbjct: 726 LHWEEPE 732
>gi|326430276|gb|EGD75846.1| hypothetical protein PTSG_07964 [Salpingoeca sp. ATCC 50818]
Length = 1204
Score = 256 bits (653), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 137/339 (40%), Positives = 198/339 (58%), Gaps = 4/339 (1%)
Query: 439 TNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMV 498
+ + ++++LP + +D++ +FCY NSK+ R +L+ L+ V R +LLPYYSR+V
Sbjct: 532 STIAEIIEQLPRSSTAASVDEIAKQFCYKNSKNARSQLIERLYFVSREEQDLLPYYSRLV 591
Query: 499 ATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFS 558
ATL + D++ L L F FL K + E+K+RN R+IGEL KF++
Sbjct: 592 ATLQPVIPDIADTLANRLCATFRFLRRKFPISHYESKLRNARYIGELTKFRVIDGMKTLH 651
Query: 559 CLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVT 618
L+ L F +H +D AC LLETCGRFLYRSP T +R +LE++ + L H T
Sbjct: 652 LLQLLLRTFKNHEVDTACMLLETCGRFLYRSPGTHVRTHLLLEVMKKKAARLRLSEHHRT 711
Query: 619 LVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKS--SIEHVLRQLRKLPWSDCE 676
L++NA C PP SA K RPPLH+YIRKLL++DL + +I+ V +LRKLPW+D
Sbjct: 712 LIDNAVLYCNPPAASAMKKKERPPLHEYIRKLLYTDLKPTPAAIKTVATRLRKLPWNDKP 771
Query: 677 --SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGM 734
Y +KC +V + I ASL A L + VVD V EEIRLG+E+ND +
Sbjct: 772 FLQYGVKCLTRVWIVTFSSIPAFASLLALLKAHIPNVTAMVVDAVCEEIRLGMEINDPKL 831
Query: 735 QQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHGT 773
+QRR+A R+ E+Y + V +++ LY ++ FG T
Sbjct: 832 RQRRVATARYFAEMYMFGLVTDALVMKVLYSLITFGVNT 870
>gi|313218031|emb|CBY41373.1| unnamed protein product [Oikopleura dioica]
Length = 648
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 130/329 (39%), Positives = 197/329 (59%), Gaps = 3/329 (0%)
Query: 445 LQRLPGCVSRDLIDQLTVEFCY-LNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLST 503
++ L +R+L+D EF LN+ NRKRL R ++ V R ++LLP+++R+ A+L
Sbjct: 1 MKSLMTIYNRELVDAAAQEFLLTLNTPVNRKRLPREIWKVDRRRVDLLPFFTRLAASLKE 60
Query: 504 CMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKAC 563
C ++ L L ++F + + KKDQ++ E KI+N R+IGE KF I +CLK
Sbjct: 61 CAPKIADDLASYLLKDFRYHVRKKDQIHFEVKIKNARYIGEATKFGILSRSEATTCLKIL 120
Query: 564 LDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENA 623
+ DF+ I++ C LLE+ GRFL+RSP++ + +LE L R KN KNLD R + ++NA
Sbjct: 121 VIDFSIVAIEMICGLLESAGRFLFRSPDSHQKTKLLLEQLKRKKNSKNLDARLLAQLDNA 180
Query: 624 YYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE--SYLLK 681
Y C PP R + RP + +YI +LL+ L K ++ VL+Q RK+ W D E Y++
Sbjct: 181 IYCCNPPTEVHREVEKRPTVQEYIHRLLYDLLSKRTVAFVLKQFRKMNWKDVEIRDYIID 240
Query: 682 CFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAH 741
+ K+ +H AS+ AG+S YH+E A+ +VD +LE+I+ +E D QRRL
Sbjct: 241 ALSAGYNVKFSVVHCAASVLAGISEYHEEEAIEIVDNILEDIKATIEFPDPRFNQRRLIQ 300
Query: 742 MRFLGELYNYEHVDSSVIFDTLYLILVFG 770
+++L ELYNY+ V S VIF TLY + G
Sbjct: 301 VKYLAELYNYKMVSSEVIFTTLYSFITLG 329
>gi|328876568|gb|EGG24931.1| eukaryotic initiation factor 4 gamma [Dictyostelium fasciculatum]
Length = 1387
Score = 251 bits (640), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 134/352 (38%), Positives = 205/352 (58%), Gaps = 9/352 (2%)
Query: 426 VETEKEKLKGVEGTNLDALLQRLPGCVSR-DLIDQLTVEFCYLNSKSNRKRLVRALFNVP 484
+ EK+ +K + L+Q+L + IDQ + LN K +K+++ +
Sbjct: 680 TDAEKKAIKAKNNLMFEELIQKLKSSTLKISTIDQAINMYLKLNLKPTKKKILTNILTQS 739
Query: 485 RTSLELLPYYSRMVATL--STCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFI 542
R + +P+++R VATL S+ +D L Q ++EE LI KK+Q+++ KIRNI FI
Sbjct: 740 RQ--DQIPFFARFVATLNQSSQNRDFVQGLCQHIDEELTSLIEKKEQIHLAVKIRNISFI 797
Query: 543 GELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEI 602
GEL KFK+ P F+ LK C DDFTHHNID+AC LLE CGR+LYR E+ R+ NML+I
Sbjct: 798 GELIKFKVLPNTTAFNYLKLCFDDFTHHNIDIACTLLEVCGRYLYRLAESQFRLRNMLDI 857
Query: 603 LMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDL-DKSSIE 661
++R KN K ++ R ++++NAY C+P + ++K P+ Q+ + L+F L D ++ +
Sbjct: 858 IIRHKNAKVMEIRQESMIDNAYLTCRP---AIVITKQVDPVKQFAKFLIFRFLADDATAK 914
Query: 662 HVLRQLRKLPWSDCESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLE 721
V +L + PW C+ YL K F+ V K K+G I+L+A + L R + F VV +LE
Sbjct: 915 TVCEKLYQFPWPSCQEYLCKYFLAVQKQKFGNIYLVADILYRLKRCYPSFVRTVVWRLLE 974
Query: 722 EIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHGT 773
+I +G E ND+ Q+R+ GELYN +D+ IF L L +G+ T
Sbjct: 975 DITVGFERNDFSQNQKRIMQATLFGELYNSCLLDTYHIFSLLIGALEYGYST 1026
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 138/257 (53%), Gaps = 7/257 (2%)
Query: 60 FLKICSLLHQRYKDFSPCLIDGLLKVFFP-GKSGEDLDADRNLKAMKKRSTLKLLLELYF 118
++I SLLHQRY+ C+ + L ++F P G S + +A+RN K +K+R+ ++L+L+LY+
Sbjct: 383 IVRIFSLLHQRYEGVDACIQESLFQLFQPLGLSISEPEAERNQKIVKRRNAIRLILDLYY 442
Query: 119 IGIIEDSSIFINIIKDLTSIEHL-KDRDTTQTNLTLLASFARQGRIFLGLPLSGPGQEIY 177
+ I+ S + ++ L + + +D++ +L +L+SF R ++GL +
Sbjct: 443 VDILHSFSPVLKLVGKLANSQTFEQDKELGYPSLVVLSSFVRPITFYIGLNKNKNQNLGL 502
Query: 178 EEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEEN 237
+ + + ++ +++ K YY + + +Q E LR+ E E IL KGEL+E
Sbjct: 503 PDIYSNI-LSIEEQTAIKDIITGYYTKICDCIQKEQQLLREKEKEMRSILVTKGELTEAF 561
Query: 238 SSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASGKDSSVPEP 297
+SY+ +RK+Y+ L N ++ A D+ +P + ++T+ + ++ S + + P
Sbjct: 562 QASYDLMRKNYEKLITNATTYA---DLIGAPLPSNDYSTKSENSQNDQKQSDQLETFSSP 618
Query: 298 VWDDEETRAFYECLPDL 314
DE+ + FYE L L
Sbjct: 619 FETDEQ-KKFYEELSPL 634
>gi|403372435|gb|EJY86116.1| MIF4G domain containing protein [Oxytricha trifallax]
Length = 1053
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 141/394 (35%), Positives = 221/394 (56%), Gaps = 27/394 (6%)
Query: 421 DTERKVETEKEK--LKGVEGT----NLDALLQRLPGCVSRDLIDQLTVEFCYLNS----K 470
D R +++EKE L + T +LD + ++L ++D ID+ +F N K
Sbjct: 354 DLSRFIQSEKETTGLSQLSMTSSEADLDEMHKKLQKSQTKDQIDEKAQDFIKQNPCVQFK 413
Query: 471 SNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQM 530
S RK + + LFN+PR SL LLPYY+R A + KD+ + LI+MLE EFN L + D +
Sbjct: 414 SGRKEMAKILFNIPRNSLSLLPYYARFTAIIHYYFKDMGNDLIKMLEHEFNELYEQNDVI 473
Query: 531 NIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSP 590
IETKIRNIRF+GEL KF++ P + CLK CLDDF HN+++ NLLETCG++L +
Sbjct: 474 KIETKIRNIRFLGELTKFQVCPPQTILECLKKCLDDFHGHNVEIITNLLETCGKYLSKLE 533
Query: 591 ETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPP---ERSARVSKVRPPLHQYI 647
ET ++ N++E L RLK +N+ + + +E+A C+ P + + ++ + YI
Sbjct: 534 ETQLKFNNLIEFLQRLKEKENISSKQLANLESALLQCRGPVGIKVHPKKQELLTNIQFYI 593
Query: 648 RKLLFSDLDKSSIEHVLRQLRKLPWSDCESYLLKCFMKVHKGKYGQIHLIASLTAGLSRY 707
+ L + K +++ V + KLPW D E ++ ++ IA L A L +Y
Sbjct: 594 KHLFLERISKKTLDEVFVLILKLPWHDEEEFI------------SRMDTIAILLASLKQY 641
Query: 708 HDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLIL 767
+ F V V+D + EEI E ND+ QRR+A M+F+GE YN++ + + V+FD LY ++
Sbjct: 642 YRPFVVKVIDSIFEEILRQCERNDFKESQRRVAMMKFIGECYNFKVLHTQVLFDLLYKLM 701
Query: 768 VFGHGTAETYWTHQKIVSGSGWLLLFLRLVVTTL 801
+ + T + + + S +RL+ TTL
Sbjct: 702 NYDNLTQQEDEIMKSLDSPQESFR--IRLICTTL 733
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 137/313 (43%), Gaps = 35/313 (11%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
++IC L+H RY++F+ LID L + FF K E KKR+ L+LL ELY G
Sbjct: 109 IEICVLMHHRYEEFAQKLIDALERQFFQEKMSE---------FNKKRNILRLLSELYLKG 159
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGLPLSGPGQEIYEE 179
+ + I LT I D++ Q+ L +L + R G +F LS +E +
Sbjct: 160 LFSEFKRLFKGISYLTQI--TPDKEEFQSALMVLTDYLRNYGEMFFH-QLSKQRREAIDN 216
Query: 180 FFKGL-----NITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELS 234
++ + Q++ + F Y N Q+ L+ + + +++ + + E+
Sbjct: 217 DYEVTIERPDFLNKQQREKIHQFFKDYLN--QKCLEEINNRYKLLKDAKRRFEDNLKEVK 274
Query: 235 EEN--SSSYEKLRKSYDHLYRNVSSLAEALDMQPP--VMPED--VHTTRVTSGEDASPAS 288
++ +SY +R ++ ++ V A+ +D P ++ ED + T + + AS
Sbjct: 275 QDEKIENSYMTIRNEFEKMHNIVEEFADTIDSPIPEFIIEEDKSLQTKMILKKKQKVDAS 334
Query: 289 GKDSSVPEPVWDDEETRAFYECLPDLRAFVPA----VLLGEAEHKANEPSVKPLEQPTDP 344
D P ++DE T FY PDL F+ + L + ++E + + +
Sbjct: 335 --DEFFP---FEDELTHNFYRNFPDLSRFIQSEKETTGLSQLSMTSSEADLDEMHKKLQK 389
Query: 345 ASEPDQGQLAAQD 357
+ DQ AQD
Sbjct: 390 SQTKDQIDEKAQD 402
>gi|393909098|gb|EFO26274.2| hypothetical protein LOAG_02196 [Loa loa]
Length = 1069
Score = 246 bits (629), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 130/331 (39%), Positives = 196/331 (59%), Gaps = 5/331 (1%)
Query: 443 ALLQRLPGCVSRDLIDQLTVEFCY-LNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATL 501
A +++LP ++RDLID+ ++F LN+++NRK+L + + R L+LLP+Y R+VATL
Sbjct: 438 AFMEQLPWLINRDLIDKAALDFVTNLNTRNNRKKLCQMMLEQHRNRLDLLPFYGRLVATL 497
Query: 502 STCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLK 561
M D++ L L ++F + K + ++ KIR RFI EL KF+I P G SCL+
Sbjct: 498 EPVMPDLALELSHSLLQQFRAAVQSKKKQRVDWKIRCARFISELVKFEIIPKGEGLSCLR 557
Query: 562 ACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVE 621
L DF HNID+ C +++ G+FLYRS ++ +M +L ++M+ K + DPR L++
Sbjct: 558 MVLFDFRGHNIDMCCAMVDAMGQFLYRSTDSHGKMKILLGVMMK-KRDRVSDPRQQMLID 616
Query: 622 NAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSD--CESYL 679
NA+Y C PP + P +IR L+ S+L + +E +R LRKL WSD C +Y
Sbjct: 617 NAFYTCIPPPVQEKPKPASDPFQDFIRYLI-SNLSRYRMEITVRCLRKLDWSDPVCANYA 675
Query: 680 LKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRL 739
++C +Y + +ASL A LS HD + V+D LE+IR+ LE N + Q +
Sbjct: 676 VECLSNPSLPRYNNVPYLASLVASLSSCHDWIGIRVLDATLEDIRIALEFNSPSLNQSTV 735
Query: 740 AHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
+ FLG+LYNY DS VIF TLY ++ FG
Sbjct: 736 LSVIFLGQLYNYSVCDSPVIFKTLYQLITFG 766
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 102/231 (44%), Gaps = 10/231 (4%)
Query: 105 KKRSTLKLLLELYFIGIIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQGRI- 163
K R ++LL EL G+ + ++ + S L DR T N+ ++ F + +
Sbjct: 141 KLRVDIRLLGELCLHGVFGKEGV--QLLGSVVSFLTLTDR-TEHINIPIVLPFCKAMNVD 197
Query: 164 FLGLPLSGPGQEIYEEFFK---GLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQME 220
LGL Q K I+ D KK F + Y +++ + ++ + + Q+
Sbjct: 198 LLGLHPYSIKQVASAANIKLPETSVISVDHKKTFAQLLLDYRSSLVDHIKQDLLEMNQLL 257
Query: 221 NENAKILNAKGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTS 280
+ +G+ S E+ + +LR Y+ + + + L+E L ++ M E+
Sbjct: 258 LSIKRQTRTRGDASAEDRNHLGELRARYEKILTSGTQLSEYLGVEMEAMKEEQSEDEEEE 317
Query: 281 GEDASPASG-KDSSVPEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKA 330
+ + ++ ++ +W DE+TR FYE +LR VPA+L E+E +
Sbjct: 318 VSALALSRALQEGTIT--IWPDEDTRQFYETRMELRQLVPAILFQESEQRT 366
>gi|312069672|ref|XP_003137791.1| hypothetical protein LOAG_02196 [Loa loa]
Length = 1056
Score = 246 bits (629), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 130/331 (39%), Positives = 196/331 (59%), Gaps = 5/331 (1%)
Query: 443 ALLQRLPGCVSRDLIDQLTVEFCY-LNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATL 501
A +++LP ++RDLID+ ++F LN+++NRK+L + + R L+LLP+Y R+VATL
Sbjct: 438 AFMEQLPWLINRDLIDKAALDFVTNLNTRNNRKKLCQMMLEQHRNRLDLLPFYGRLVATL 497
Query: 502 STCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLK 561
M D++ L L ++F + K + ++ KIR RFI EL KF+I P G SCL+
Sbjct: 498 EPVMPDLALELSHSLLQQFRAAVQSKKKQRVDWKIRCARFISELVKFEIIPKGEGLSCLR 557
Query: 562 ACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVE 621
L DF HNID+ C +++ G+FLYRS ++ +M +L ++M+ K + DPR L++
Sbjct: 558 MVLFDFRGHNIDMCCAMVDAMGQFLYRSTDSHGKMKILLGVMMK-KRDRVSDPRQQMLID 616
Query: 622 NAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSD--CESYL 679
NA+Y C PP + P +IR L+ S+L + +E +R LRKL WSD C +Y
Sbjct: 617 NAFYTCIPPPVQEKPKPASDPFQDFIRYLI-SNLSRYRMEITVRCLRKLDWSDPVCANYA 675
Query: 680 LKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRL 739
++C +Y + +ASL A LS HD + V+D LE+IR+ LE N + Q +
Sbjct: 676 VECLSNPSLPRYNNVPYLASLVASLSSCHDWIGIRVLDATLEDIRIALEFNSPSLNQSTV 735
Query: 740 AHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
+ FLG+LYNY DS VIF TLY ++ FG
Sbjct: 736 LSVIFLGQLYNYSVCDSPVIFKTLYQLITFG 766
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 102/231 (44%), Gaps = 10/231 (4%)
Query: 105 KKRSTLKLLLELYFIGIIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQGRI- 163
K R ++LL EL G+ + ++ + S L DR T N+ ++ F + +
Sbjct: 141 KLRVDIRLLGELCLHGVFGKEGV--QLLGSVVSFLTLTDR-TEHINIPIVLPFCKAMNVD 197
Query: 164 FLGLPLSGPGQEIYEEFFK---GLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQME 220
LGL Q K I+ D KK F + Y +++ + ++ + + Q+
Sbjct: 198 LLGLHPYSIKQVASAANIKLPETSVISVDHKKTFAQLLLDYRSSLVDHIKQDLLEMNQLL 257
Query: 221 NENAKILNAKGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTS 280
+ +G+ S E+ + +LR Y+ + + + L+E L ++ M E+
Sbjct: 258 LSIKRQTRTRGDASAEDRNHLGELRARYEKILTSGTQLSEYLGVEMEAMKEEQSEDEEEE 317
Query: 281 GEDASPASG-KDSSVPEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKA 330
+ + ++ ++ +W DE+TR FYE +LR VPA+L E+E +
Sbjct: 318 VSALALSRALQEGTIT--IWPDEDTRQFYETRMELRQLVPAILFQESEQRT 366
>gi|402586289|gb|EJW80227.1| MIF4G domain-containing protein, partial [Wuchereria bancrofti]
Length = 521
Score = 243 bits (619), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 143/390 (36%), Positives = 217/390 (55%), Gaps = 16/390 (4%)
Query: 386 EKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEKDTERKV-ETEKEKLKGVE-GTNLDA 443
E+A+D + +G D EE K E D V E K+ G + + A
Sbjct: 27 EEAEDEGDDHSEGVDDEET---------KVDLNEMDPSLPVSHIETPKISGQDLKLMMLA 77
Query: 444 LLQRLPGCVSRDLIDQLTVEFCY-LNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLS 502
+++LP ++RDLID+ ++F LN+++NRK+L + + R L+LLP+Y R+VATL
Sbjct: 78 FMEQLPWLINRDLIDKAALDFVTNLNTRNNRKKLCQMMLEQYRNRLDLLPFYGRLVATLE 137
Query: 503 TCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKA 562
M D++ L L ++F + K + ++ KIR RFI EL KF I P G SCL+
Sbjct: 138 PVMPDLALELSHALLQQFRAAVQNKKKQRVDWKIRCARFISELVKFGIIPKGEGLSCLRM 197
Query: 563 CLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVEN 622
L DF HNID+ C +++ G+FLYRS ++ +M +L ++M+ K + DPR L++N
Sbjct: 198 VLFDFRGHNIDMCCAIVDAMGQFLYRSTDSHGKMKILLGVMMK-KRDRVSDPRQQMLIDN 256
Query: 623 AYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSD--CESYLL 680
A+Y C PP + P +IR L+ S+L + +E +R LRKL WSD +Y +
Sbjct: 257 AFYTCIPPPVEEKPKSASDPFQDFIRYLI-SNLSRYRMEITIRCLRKLDWSDPVYANYAV 315
Query: 681 KCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLA 740
+C +Y + +ASL A LS HD + V+D+ LE+IR+ LE+N + Q +
Sbjct: 316 QCLSNPSLPRYNNVPYLASLIAALSSCHDWIGIRVLDQTLEDIRIALEVNSPSLHQSTVL 375
Query: 741 HMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
+ FLG+LYNY DS VIF TLY ++ FG
Sbjct: 376 SVIFLGQLYNYSVCDSPVIFKTLYQLITFG 405
>gi|401412918|ref|XP_003885906.1| putative MIF4G domain-containing protein [Neospora caninum Liverpool]
gi|325120326|emb|CBZ55880.1| putative MIF4G domain-containing protein [Neospora caninum Liverpool]
Length = 1511
Score = 238 bits (608), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 173/594 (29%), Positives = 278/594 (46%), Gaps = 49/594 (8%)
Query: 213 HTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPED 272
H L E N + + +G++ E +S + +L + ++ +AEA+ P D
Sbjct: 464 HQQLVMQEQHNMQQVVNRGQVDAEANSQFLQLSEKLKTFLQHAQIIAEAIKENP----VD 519
Query: 273 VHTTRVTSGE----DASPAS-------------GKDSSVPEPVWDDEETRAFYECLPDLR 315
+ + E DA AS G D + +W DE + FY + +L+
Sbjct: 520 IQAIHARTAELLNLDADAASATRVGMPGGEESKGDDENDENLMWKDEAEKEFYTDILNLK 579
Query: 316 AFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTAEVSADLGASPEGKSVE 375
+PAVLLG E K S + E T P Q +++TA E S
Sbjct: 580 EVIPAVLLGVREAKDTSESKRTSEIKTQRV--PPLAQSNSEETA----------ENASAA 627
Query: 376 KGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEKDTERKVETEKEKLKG 435
G D + + + + + +
Sbjct: 628 SGTDGGKLKSSPSPSSSSSSSSSSLSSSSSSSTSSSSSSSSSSSSASSSSSSSSSSASAA 687
Query: 436 VEGTN-----LDALLQRLPGCVSRDLIDQLTVEFCY--LNSKSNRKRLVRALFNVPRTSL 488
V GT+ +D +L RL ++DQ+ ++ Y LN+K+NR L +A+ +V R L
Sbjct: 688 VPGTSAATQGVDLMLLRLGQASEAHVVDQIAMDIFYERLNTKANRVALAKAIASVSRMQL 747
Query: 489 ELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKF 548
LLP+Y+R++A L CMKDV + ++ L+ E ++ +K ++E+KI+++RFI E KF
Sbjct: 748 HLLPFYARLLAILKPCMKDVCASVLDSLQGEMKKILEEKHPTDLESKIKSVRFICECTKF 807
Query: 549 KIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKN 608
+ PAGL+ + ++D T H++++ + + CG +L P T R + +LE ++R+K
Sbjct: 808 SLLPAGLILGAFNSLMEDMTPHHVELLYHTADACGHYLLHMPLTRQRFSALLEKMLRIKT 867
Query: 609 VKNLDPRHVTLVENAYYLCKPPERS---ARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLR 665
KNL R L+E+AY+ +P + + K PP Q++RKLLF +L + + V R
Sbjct: 868 AKNLPARLDILIEDAYHQLRPAANAKAPGKGKKPEPPEKQFLRKLLFEELQRRDEDQVAR 927
Query: 666 QLRKLPWSDCESYLLKCFMK-----VHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVL 720
+RK PWS E + K F + + IH IASL L++Y +A +D +L
Sbjct: 928 LIRKFPWS-TEPKIEKWFRDDVLDLDMQTNFDHIHRIASLMCALAKYLPSAIIACIDGLL 986
Query: 721 EEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHGTA 774
E I++GLE D R+ M+FL ELYNY VDSSVIFD LY + G T+
Sbjct: 987 EAIQVGLEREDPRDAPIRVRQMKFLAELYNYRLVDSSVIFDMLYHLCGCGSATS 1040
>gi|296206146|ref|XP_002750085.1| PREDICTED: regulator of nonsense transcripts 2 [Callithrix jacchus]
Length = 583
Score = 238 bits (608), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 112/209 (53%), Positives = 147/209 (70%), Gaps = 2/209 (0%)
Query: 564 LDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENA 623
L DF+HH+I++AC LLETCGRFL+RSPE+ +R + +LE +MR K +LD R+VT+VENA
Sbjct: 3 LSDFSHHHIEMACTLLETCGRFLFRSPESHLRTSVLLEQMMRKKQAMHLDARYVTMVENA 62
Query: 624 YYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE--SYLLK 681
YY C PP V K RPPL +Y+RKLL+ DL K + E VLRQ+RKLPW D E Y++
Sbjct: 63 YYYCNPPPAEKTVKKKRPPLQEYVRKLLYKDLSKVTTEKVLRQMRKLPWQDQEVKDYVIC 122
Query: 682 CFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAH 741
C + + KY IH +A+L AGL Y ++ + VVD VLE+IRLG+E+N QRR++
Sbjct: 123 CMINIWNVKYNSIHCVANLLAGLVLYQEDVGIHVVDGVLEDIRLGMEVNQPKFNQRRISS 182
Query: 742 MRFLGELYNYEHVDSSVIFDTLYLILVFG 770
+FLGELYNY V+S+VIF TLY FG
Sbjct: 183 AKFLGELYNYRMVESAVIFRTLYSFTSFG 211
>gi|66812722|ref|XP_640540.1| eukaryotic initiation factor 4 gamma, middle domain-containing
protein [Dictyostelium discoideum AX4]
gi|60468570|gb|EAL66573.1| eukaryotic initiation factor 4 gamma, middle domain-containing
protein [Dictyostelium discoideum AX4]
Length = 1395
Score = 237 bits (605), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 127/354 (35%), Positives = 205/354 (57%), Gaps = 12/354 (3%)
Query: 426 VETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPR 485
+E EK+++K L+ ++++L +ID L EF L SK + L + L +
Sbjct: 735 IEKEKQRVKHC----LEDIVKQLKNSNKPSVIDSLVTEFIKLPSKFTKLFLQQLLLH--- 787
Query: 486 TSLELLPYYSRMVATL--STCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIG 543
+ ++ +P R +AT+ S ++ + I+ +EE+ L KK+ + K+RNI FI
Sbjct: 788 SRIDHIPSICRFLATIYQSNSYREYVNTFIKEIEEDMKGLFEKKEPNLLNVKLRNITFIS 847
Query: 544 ELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEIL 603
E KF I P FS L+ C DDF HNIDVAC + ETCGRFLYR+P+T IR+ NML+IL
Sbjct: 848 EFIKFSILPKSTAFSYLRICFDDFIQHNIDVACLIFETCGRFLYRTPDTQIRLRNMLDIL 907
Query: 604 MRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHV 663
++ +N +L +VENAY C+P + ++ P+ ++++ L+F L ++++ +
Sbjct: 908 IKYRNSTSLGATKEPMVENAYLACRP--LVVKRKQIN-PIKKFVKFLIFKYLSSTTLDRI 964
Query: 664 LRQLRKLPWSDCESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEI 723
+ ++ +LPW DC YL K + V KGK+G I+LIA + L Y+ EF V+ ++ EEI
Sbjct: 965 VEKILQLPWPDCSDYLCKYLLDVQKGKFGNIYLIADVLYHLKEYYPEFVRHVIWKLYEEI 1024
Query: 724 RLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHGTAETY 777
+G E ND+ Q+R+ + GELYN ++++ IFD L L FG+ T+ +
Sbjct: 1025 TIGFEKNDFNYNQKRIMQVTLFGELYNACLLETNHIFDLLIGALEFGYTTSHLF 1078
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 122/255 (47%), Gaps = 14/255 (5%)
Query: 59 YFLKICSLLHQRYKDFSPCLIDGLLKVFFP-GKSGEDLDADRNLKAMKKRSTLKLLLELY 117
Y +++ S+++Q+Y D + + + F P + D + +RN K K+R ++++++L+
Sbjct: 387 YVIQVLSMMYQKYDDVDTIIAEQIPPFFTPLIIASTDSENERNSKITKRRFIIRIMIDLF 446
Query: 118 FIGIIEDSSIFINIIKDLTSIEHL-KDRDTTQTNLTLLASFARQGRIFLGLPLSGPGQEI 176
+ II ++ L++ + +D+++ NL F +Q + +S +I
Sbjct: 447 CVDIIHSYQPIYKLVSKLSTSSTIEQDKESGYGNLLTFLVFLKQFQ-----QVSNYKDKI 501
Query: 177 YE--EFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELS 234
+ F L +T ++ K YY + L E + LR E E + KGE+
Sbjct: 502 PDLINLFHSL-LTTEEITNTKNLISNYYQTLCNFLTKEKSLLRDREKEIKLFMRTKGEVP 560
Query: 235 EENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASGKDSSV 294
EE+S Y+ +RK Y+ L N+SS AE + +P +P + ++ ++ + S +
Sbjct: 561 EESSKDYDSMRKQYEKLITNISSFAELIG-EP--IPNNDYSFQLEEEINNEQKSEQLEVF 617
Query: 295 PEPVWDDEETRAFYE 309
P +DE+ + FYE
Sbjct: 618 DSPFENDEQ-KQFYE 631
>gi|213410627|ref|XP_002176083.1| nonsense-mediated mRNA decay protein [Schizosaccharomyces japonicus
yFS275]
gi|212004130|gb|EEB09790.1| nonsense-mediated mRNA decay protein [Schizosaccharomyces japonicus
yFS275]
Length = 1074
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 117/343 (34%), Positives = 193/343 (56%)
Query: 425 KVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVP 484
K TE K ++A L LP + + ID+ VEFC++NSK++R RL++ L +V
Sbjct: 450 KTSTEDVKSTTSVAAQVNAYLLNLPTLNNPEAIDKAAVEFCFINSKASRNRLIKTLTSVN 509
Query: 485 RTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGE 544
RT +LLPYY R+VA L D+++ L+ F ++ KK + +++ IR+I E
Sbjct: 510 RTRSDLLPYYCRLVAILKQISPDIANALVDYARRSFKRMLKKKAKHEYHSRVLTIRYISE 569
Query: 545 LCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILM 604
L KF++ P + F C + L +FT NI+V +LE CGRFL+R PE+S +M +LE +
Sbjct: 570 LTKFRVMPLHITFHCFRLALTEFTSFNIEVLSLMLENCGRFLFRLPESSAQMLTLLETIQ 629
Query: 605 RLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVL 664
R K+ L P+ L++NA Y PP+R+ + RP L QY+ +++ L+ + V
Sbjct: 630 RKKDASVLAPQDQLLLDNALYHVNPPKRALIEVRTRPILEQYLCNVIYKQLNTKTYRAVA 689
Query: 665 RQLRKLPWSDCESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIR 724
++RK+ W + E+ L + +V ++ + +A L L RYH E +D++ E+I
Sbjct: 690 ERIRKIKWGEQENTLFRVLAEVWHIQFDNLKALALLIQELIRYHPEDCYEYIDDLFEDIL 749
Query: 725 LGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLIL 767
LG+E Q+ ++ R LGELY + +D++ IF+ L+ +L
Sbjct: 750 LGVETRQASESQKIMSRARLLGELYASKVLDATAIFNLLFSLL 792
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 63/313 (20%), Positives = 121/313 (38%), Gaps = 46/313 (14%)
Query: 62 KICSLLHQRY--KDFSPCLIDGLLKVFFPGKSG---------EDLDADRNLKAMKKRSTL 110
KI LHQR+ K +P L +FF G E + +R ++R+ +
Sbjct: 101 KIAYCLHQRFFTKFSTPMLAQLYFNIFFLGNFNAAAQTCTFVEPKEKERQAFYTRQRNIV 160
Query: 111 KLLLELYFIGIIEDSSIFINIIKDLTSIEHLKDRDTTQTN-------LTLLASFARQGRI 163
++L+EL+ G++ + F++++ L+++ + Q+ R
Sbjct: 161 RVLIELWLRGVVHTAKDFVDLLPSLSALSRRSRKVWFQSYDMDKPIVFVAFTEIVRNDAK 220
Query: 164 FLGLPLSGPGQEIYEEFF---KGLNITADQKKI------------FKKAFHTYYNAVQEL 208
F LP+ + Y + NI D + + F+ YY +
Sbjct: 221 FASLPVVHGIVKHYSDILFSDPSSNIETDNRALLDAICPPEWRSSFRSTLQHYYEKLLNY 280
Query: 209 LQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPV 268
LQ H + + + + +GE++EE ++ K + +Y + +A L ++ P
Sbjct: 281 LQTYHAEYMKRKKQTHDLAVNRGEVNEERMHDLSEMLKVQERIYSSCELIANVLQLEKPD 340
Query: 269 MPEDVHTTRVTSGEDASPASGKDSSVP----EPVWDDEETRAFYECLPDLRAFVPAVLL- 323
+P + + + A +S P + +W+ ++ R FYE L +L VP LL
Sbjct: 341 IPSEDSSANANASVVAGLSSSYSKLTPLERSDSIWEHDDERKFYEDLLNLSTMVPESLLP 400
Query: 324 --------GEAEH 328
G EH
Sbjct: 401 SIPSNIDTGSVEH 413
>gi|302422506|ref|XP_003009083.1| nonsense-mediated mRNA decay protein [Verticillium albo-atrum
VaMs.102]
gi|261352229|gb|EEY14657.1| nonsense-mediated mRNA decay protein [Verticillium albo-atrum
VaMs.102]
Length = 739
Score = 225 bits (574), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 122/308 (39%), Positives = 179/308 (58%), Gaps = 13/308 (4%)
Query: 384 EKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEKDTERKVETEKEKLKGVEGTNLDA 443
E K K P+ ++ GK + D E K D + K G +DA
Sbjct: 410 EDGKKKKPENDEQVGKKIDAADVEAPKPTDAADDQSMAIANKTI----------GAQVDA 459
Query: 444 LLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLST 503
+L RLP ++D ID+ ++FC+LNSK++R RL++AL VP+ +LLP ++R+ ATL
Sbjct: 460 VLARLPELTTKDAIDETAIDFCFLNSKASRNRLIKALTEVPKGRGDLLPCWARLAATLGQ 519
Query: 504 CMKDVSSMLIQMLEEEFNFLINKKDQMNI-ETKIRNIRFIGELCKFKIAPAGLVFSCLKA 562
M DV L+ L+ EF L +K++ + + ++ NIR++ EL KF I P +VF CLK
Sbjct: 520 YMPDVPKGLVDYLDAEFRSLQRRKEKDFLGQVRLGNIRYLAELTKFGIVPEHVVFHCLKV 579
Query: 563 CLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVEN 622
+DDF+ NI++ CNLLE CGR+L R+PETS RMA LE L R K+V+++ L+EN
Sbjct: 580 SMDDFSKMNIEIICNLLENCGRYLLRNPETSPRMATFLETLQRKKSVQHIGQAERMLIEN 639
Query: 623 AYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE--SYLL 680
A Y PPER A K R P+ +IRKL++ D+ K + +L+Q+R+L W + E + L
Sbjct: 640 AVYYVDPPERPAIEQKERDPMELFIRKLIYMDMTKRNFSKILKQIRRLHWEETEVVTILE 699
Query: 681 KCFMKVHK 688
K F K K
Sbjct: 700 KVFSKPGK 707
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 84/190 (44%), Gaps = 23/190 (12%)
Query: 194 FKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYR 253
FK Y++ V+ + + ++ NA+ GE+ E+ S+YEK KS + L
Sbjct: 287 FKSILKRYFDDVKNHVLRDQKAIHSQSRRNAEAYVKSGEVFEDRQSNYEKQVKSQERLVA 346
Query: 254 NVSSLAEALDMQ-PPVMPEDVHTTRVTSGEDASPASGKDSSVPEPVWDDEETRAFYECLP 312
N ++A+ + + + R+ S +G +W+DEE R FYE L
Sbjct: 347 NAQAIADVIGGRNAGAANGSLGWLRLESTSRLGDGAG--------IWEDEEERRFYENLV 398
Query: 313 DLRAFVPAVLLGEAEHKA---NEPSVKPLE-------QPTDPASEPDQGQLAAQDT--AE 360
DL+ VP +LL + + K +E K ++ +PTD A DQ A T A+
Sbjct: 399 DLKGKVPGMLLEDGKKKKPENDEQVGKKIDAADVEAPKPTDAAD--DQSMAIANKTIGAQ 456
Query: 361 VSADLGASPE 370
V A L PE
Sbjct: 457 VDAVLARLPE 466
>gi|452822995|gb|EME30009.1| RNA-binding protein [Galdieria sulphuraria]
Length = 1157
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 129/400 (32%), Positives = 221/400 (55%), Gaps = 18/400 (4%)
Query: 413 DKEKGKEKDTERKVETEKEKLKGVEGTNLDA------LLQRLPGCVSRDLIDQLTVEFCY 466
D ++ K+KD VE+ + D L L C D ID+ +E
Sbjct: 424 DIQEEKKKDQNENVESSLNGNNSISREQSDKSRLSEDALSSLLSCSDMDEIDKWCLENWS 483
Query: 467 LNSKSN-RKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLIN 525
+ KS RK+LV+ LFN + E++P SR+VA L+ D+++ + Q+L+++F
Sbjct: 484 IFKKSQIRKKLVKVLFNFSFANPEMVPLASRLVAALNPIYPDIAANVTQVLKDDFMSYFE 543
Query: 526 KKD--QMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCG 583
KK+ + +++ +I N R+I E+ KF++ PA +V + +K CL+DF+H+N+D+ C +LE+CG
Sbjct: 544 KKETGEHHLKCRIWNARWISEMTKFRLFPAHVVLNYVKLCLEDFSHYNVDIVCAILESCG 603
Query: 584 RFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPL 643
+FLY ET R +++L+IL RL++VKNL+PRH +VENAYY +P + R PL
Sbjct: 604 QFLYNKSETEYRTSSLLDILWRLRSVKNLEPRHEVMVENAYYTVRPLNAKQEKNAEREPL 663
Query: 644 HQYIRKLLF-SDLDKSSIEHVLRQLRKLPWS-DCESYLLKCFMKVHKGKYGQIHLIASLT 701
++I +LF + + ++++LRKLP + + E++L+ F++ K Y + ++ +
Sbjct: 664 KEFIHHILFETRYHYRELPWLVKKLRKLPCTMEMETFLVDEFLQTEKFPYDCLGDMSKVI 723
Query: 702 AGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFD 761
S+Y D + +VD ++E I LE D Q+RLA ++ LGEL+ V+ I +
Sbjct: 724 TEYSKYRDSIGIGIVDGIVEAIFCLLENQDNRFLQQRLAQLKLLGELFKTRFVNGRFIMN 783
Query: 762 TLYLILVFGHGTAETYWTHQKIVSGSGWLLLFLRLVVTTL 801
Y I+ +G W +V L + +R+V + L
Sbjct: 784 LAYCIISYG-------WNESLLVEQENGLFVRVRMVCSLL 816
Score = 40.8 bits (94), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 48/265 (18%), Positives = 111/265 (41%), Gaps = 21/265 (7%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
+++ S +++RY +F+ ++ L ++ L KRS L L++EL +
Sbjct: 159 VEVISEIYRRYPEFTDHFVEHL---------SRNISQSSGLDWNTKRSFLHLVVELCCVN 209
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTN--LTLLASFARQGRIFLGLPLSGPGQEI-Y 177
I+ S + +K+ ++ + N +L ++ + IF P EI Y
Sbjct: 210 IL-PSFKLVAFLKETNKSTNIGSDLASAVNAFTSLAKNYLAELLIFPPTDCDNPLSEIEY 268
Query: 178 EEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEEN 237
++ ++ ++ ++KK + + + +L + +E E + +GE+ ++
Sbjct: 269 KKGWEYWILSQEEKKQIFGIYESLFEKSCSVLNELQREITDLEKETSVSRQMQGEVQQDT 328
Query: 238 SSSYEKLRKSYDHLYRNVSSLAEALDMQPPVM-------PEDVHTTRVTSGEDASPASGK 290
+ ++ RK + L N+ +L L Q P++ ++H+ +
Sbjct: 329 QNIFQSKRKQFIKLSSNIKTLCSLLGFQMPIIIIQDEEKQSNIHSPNSLDSYSNTFTQET 388
Query: 291 DSSVPE-PVWDDEETRAFYECLPDL 314
++ P+ ++ E R FYE LP +
Sbjct: 389 ETEKPQKSCFETEAERKFYEDLPSI 413
>gi|297823837|ref|XP_002879801.1| hypothetical protein ARALYDRAFT_903199 [Arabidopsis lyrata subsp.
lyrata]
gi|297325640|gb|EFH56060.1| hypothetical protein ARALYDRAFT_903199 [Arabidopsis lyrata subsp.
lyrata]
Length = 154
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 101/115 (87%), Positives = 108/115 (93%)
Query: 558 SCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHV 617
S KACLD+FTHHNIDVACNLLETCGRFLYRSPET++RM NML+ILMRLKNVKNLDPR
Sbjct: 4 SATKACLDEFTHHNIDVACNLLETCGRFLYRSPETTLRMTNMLDILMRLKNVKNLDPRQS 63
Query: 618 TLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPW 672
TLVENAYYLCKPPERSAR+SKVRPPLHQYIRKLLFSDLDK SI +VL+QLRKLPW
Sbjct: 64 TLVENAYYLCKPPERSARISKVRPPLHQYIRKLLFSDLDKDSIANVLKQLRKLPW 118
>gi|237835429|ref|XP_002367012.1| MIF4G domain-containing protein [Toxoplasma gondii ME49]
gi|211964676|gb|EEA99871.1| MIF4G domain-containing protein [Toxoplasma gondii ME49]
gi|221506314|gb|EEE31949.1| MIF4G domain-containing protein, putative [Toxoplasma gondii VEG]
Length = 1439
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 122/346 (35%), Positives = 197/346 (56%), Gaps = 12/346 (3%)
Query: 440 NLDALLQRLPGCVSRDLIDQLTVEFCY--LNSKSNRKRLVRALFNVPRTSLELLPYYSRM 497
+D +L RL +DQ+ ++ Y LN+K NR L +A+ +V RT L+LLP+Y+R+
Sbjct: 657 GMDLMLLRLSQASEAHAVDQIAMDIFYERLNTKVNRAALTKAITSVSRTQLQLLPFYARL 716
Query: 498 VATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVF 557
+A L MKDV ++ L+ E ++ +K +E+KI+N+RFI E KF + P G V
Sbjct: 717 LAILKPFMKDVCGGVLDYLQGEMKRILEEKHPTELESKIKNVRFIAECTKFGLLPVGFVL 776
Query: 558 SCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHV 617
+ ++D T H++++ ++ + CG +L P T R + +L+ ++++K KNL P H+
Sbjct: 777 GAFNSLMEDMTPHHVELLYHIADACGNYLLHMPLTRQRFSALLQKMLKIKTAKNL-PAHL 835
Query: 618 -TLVENAYYLCKPPERS---ARVSKV-RPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPW 672
L+E+AY+ + + R +K PP Q++RKL+F +L + + V R +RK PW
Sbjct: 836 DILLEDAYHQLRSSTNARAQGRGAKTPEPPEKQFLRKLIFEELLRRDEDQVARVIRKFPW 895
Query: 673 S---DCESYLLKCFMKVH-KGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLE 728
S E + + + + + + IH IASL L++Y +A +D +LE I++GLE
Sbjct: 896 STEPKVEKWFRENVLDLDMQTNFDHIHRIASLMCALAKYLPSAIIACIDGLLEAIQVGLE 955
Query: 729 LNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHGTA 774
D R+ M+FL ELYNY VDSSVIFD LY + FG T+
Sbjct: 956 REDPRDAPIRVRQMKFLAELYNYRLVDSSVIFDMLYHLCGFGSATS 1001
Score = 43.1 bits (100), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 54/130 (41%), Gaps = 13/130 (10%)
Query: 213 HTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPED 272
H L E N +++ +G++ E +S + +LR + + ++A+A+ P M
Sbjct: 457 HQQLIMQEQHNMQMVVNRGQVDAEANSQFLQLRGRLNTFLLHAQAIADAIQESPVDMQAI 516
Query: 273 VHTTRVTSGEDASPASGKDSSVPEP-------------VWDDEETRAFYECLPDLRAFVP 319
T DA + VP +W DE + FY + +L+ +P
Sbjct: 517 QARTAARLNLDADAVAATRVGVPGSEETKAEEEVDDNLMWRDEAEKEFYTDILNLKEVIP 576
Query: 320 AVLLGEAEHK 329
AVLLG E K
Sbjct: 577 AVLLGVREAK 586
>gi|221485458|gb|EEE23739.1| MIF4G domain-containing protein, putative [Toxoplasma gondii GT1]
Length = 1468
Score = 215 bits (548), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 120/345 (34%), Positives = 194/345 (56%), Gaps = 10/345 (2%)
Query: 440 NLDALLQRLPGCVSRDLIDQLTVEFCY--LNSKSNRKRLVRALFNVPRTSLELLPYYSRM 497
+D +L RL +DQ+ ++ Y LN+K NR L +A+ +V RT L+LLP+Y+R+
Sbjct: 657 GMDLMLLRLSQASEAHAVDQIAMDIFYERLNTKVNRAALTKAITSVSRTQLQLLPFYARL 716
Query: 498 VATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVF 557
+A L MKDV ++ L+ E ++ +K +E+KI+N+RFI E KF + P G V
Sbjct: 717 LAILKPFMKDVCGGVLDYLQGEMKRILEEKHPTELESKIKNVRFIAECTKFGLLPVGFVL 776
Query: 558 SCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHV 617
+ ++D T H++++ ++ + CG +L P T R + +L+ ++++K KNL
Sbjct: 777 GAFNSLMEDMTPHHVELLYHIADACGNYLLHMPLTRQRFSALLQKMLKIKTAKNLPADLD 836
Query: 618 TLVENAYYLCKPPERS---ARVSKV-RPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWS 673
L+E+AY+ + + R +K PP Q++RKL+F +L + + V R +RK PWS
Sbjct: 837 ILLEDAYHQLRSSTNARAQGRGAKTPEPPEKQFLRKLIFEELLRRDEDQVARMIRKFPWS 896
Query: 674 ---DCESYLLKCFMKVH-KGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLEL 729
E + + + + + + IH IASL L++Y +A +D +LE I++GLE
Sbjct: 897 TEPKVEKWFRENVLDLDMQTNFDHIHRIASLMCALAKYLPSAIIACIDGLLEAIQVGLER 956
Query: 730 NDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHGTA 774
D R+ M+FL ELYNY VDSSVIFD LY + FG T+
Sbjct: 957 EDPRDAPIRVRQMKFLAELYNYRLVDSSVIFDMLYHLCGFGSATS 1001
Score = 43.1 bits (100), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 54/130 (41%), Gaps = 13/130 (10%)
Query: 213 HTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPED 272
H L E N +++ +G++ E +S + +LR + + ++A+A+ P M
Sbjct: 457 HQQLIMQEQHNMQMVVNRGQVDAEANSQFLQLRGRLNTFLLHAQAIADAIQESPVDMQAI 516
Query: 273 VHTTRVTSGEDASPASGKDSSVPEP-------------VWDDEETRAFYECLPDLRAFVP 319
T DA + VP +W DE + FY + +L+ +P
Sbjct: 517 QARTAARLNLDADAVAATRVGVPGSEETKAEEEVDDNLMWRDEAEKEFYTDILNLKEVIP 576
Query: 320 AVLLGEAEHK 329
AVLLG E K
Sbjct: 577 AVLLGVREAK 586
>gi|238606358|ref|XP_002396695.1| hypothetical protein MPER_03021 [Moniliophthora perniciosa FA553]
gi|215469735|gb|EEB97625.1| hypothetical protein MPER_03021 [Moniliophthora perniciosa FA553]
Length = 304
Score = 209 bits (533), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 106/247 (42%), Positives = 153/247 (61%), Gaps = 7/247 (2%)
Query: 541 FIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANML 600
++ L KF++ P ++ K CLDDF+ +N++ LLE CGRFL RS +T R ML
Sbjct: 2 YLSNLTKFRVVPTHVILHIFKVCLDDFSGNNVENLALLLEGCGRFLLRSEDTRERFGTML 61
Query: 601 EILMRLKNVKNLDPRHVTLVENAYYL-----CKPPERSARVSKVRPPLHQYIRKLLFSDL 655
E++ R +++++ D R + L+ENAYY C PPERS R K R P+ +IR L++ L
Sbjct: 62 ELMRRKQSMQHFDQRQLLLLENAYYQASIYHCNPPERSPRQEKERSPMELFIRHLIYDVL 121
Query: 656 DKSSIEHVLRQLRKLPWSD--CESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAV 713
K +I+ V + +RKL W D + L K F K K K+G I L+A LT L RYH F+V
Sbjct: 122 AKKTIDKVFKLIRKLDWDDENVRAILFKIFTKPWKLKFGNISLVAILTYDLQRYHPSFSV 181
Query: 714 AVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHGT 773
++VD+VLE+IR GLE N Y QRR+A +++LGELY Y + S ++FDTL+ ++ FGH
Sbjct: 182 SIVDQVLEDIRRGLEQNVYSTNQRRVATIKYLGELYIYRLLSSGIVFDTLWSLVTFGHRK 241
Query: 774 AETYWTH 780
+ H
Sbjct: 242 RNLRYRH 248
>gi|19114696|ref|NP_593784.1| nonsense-mediated decay protein Upf2 [Schizosaccharomyces pombe
972h-]
gi|15214089|sp|O13824.1|NMD2_SCHPO RecName: Full=Nonsense-mediated mRNA decay protein 2; AltName:
Full=Up-frameshift suppressor 2
gi|11228928|gb|AAG33226.1|AF301014_1 Upf2p-like protein [Schizosaccharomyces pombe]
gi|2388907|emb|CAB11644.1| nonsense-mediated decay protein Upf2 [Schizosaccharomyces pombe]
Length = 1049
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 111/330 (33%), Positives = 187/330 (56%)
Query: 438 GTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRM 497
+ +D L +LP VS +L +++ +EF LN+K++R RL++AL +PRTS L+PYY R+
Sbjct: 442 SSRVDNFLLKLPSMVSLELTNEMALEFYDLNTKASRNRLIKALCTIPRTSSFLVPYYVRL 501
Query: 498 VATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVF 557
LS + S+ L+ F +I++K + +T++ +R+I EL KF++ P +VF
Sbjct: 502 ARILSQLSSEFSTSLVDHARHSFKRMIHRKAKHEYDTRLLIVRYISELTKFQLMPFHMVF 561
Query: 558 SCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHV 617
C K C+++FT +++V LLE+CGRFL R PET ++M + LE + + K L +
Sbjct: 562 ECYKLCINEFTPFDLEVLALLLESCGRFLLRYPETKLQMQSFLEAIQKKKLASALASQDQ 621
Query: 618 TLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCES 677
++ENA + PP+R VSK + +++ L+ L ++ L LRK W D
Sbjct: 622 LVLENALHFVNPPKRGIIVSKKKSLKEEFLYDLIQIRLKDDNVFPTLLLLRKFDWKDDYQ 681
Query: 678 YLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQR 737
L M+V KY ++ +A L + L ++H EF + V+D+ LE + + +D+ +Q+
Sbjct: 682 ILYNTIMEVWNIKYNSLNALARLLSALYKFHPEFCIHVIDDTLESLFSAVNNSDHVEKQK 741
Query: 738 RLAHMRFLGELYNYEHVDSSVIFDTLYLIL 767
RLA RF+ EL +D I + L+ +L
Sbjct: 742 RLAQARFISELCVIHMLDVRAITNFLFHLL 771
>gi|422294332|gb|EKU21632.1| regulator of nonsense transcripts 2, partial [Nannochloropsis
gaditana CCMP526]
Length = 419
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 106/258 (41%), Positives = 157/258 (60%), Gaps = 21/258 (8%)
Query: 534 TKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETS 593
K + ++++GEL KFKI P + F+ L ACL+ F+ HN+++AC LLE+CGRFL+ +P T
Sbjct: 81 AKRKTVKYVGELVKFKICPPIVPFTFLNACLEAFSRHNVELACALLESCGRFLFLTPHTH 140
Query: 594 IRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPER--SARVSKVRPPLHQYIRKLL 651
R+ L + RLK VK+LDP L++NA +C PP + + R + + PPL+ Y+R LL
Sbjct: 141 TRLKGYLSTMERLKRVKSLDPTLEVLIDNACLICNPPSQRTTTRQTVLLPPLYAYLRFLL 200
Query: 652 FSDLDKSSIEHVLRQLRKLPW--------------SDCESYLLKCFMKVHKGKYGQIHLI 697
F L + + VL LRK PW S+ E + L+ ++ +GK+ +H +
Sbjct: 201 FERLSPKNTDDVLYSLRKFPWKTPRGGAPAEATGLSELEVFFLRSVLQAARGKFHALHAL 260
Query: 698 ASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRR----LAHMRFLGELYNYEH 753
A + AGL +YH+ AV++VDEVLEE++ GLE G + R LA R LGE YNY
Sbjct: 261 ADVVAGLGKYHENMAVSMVDEVLEELKRGLETAG-GRRDRDTQGFLALSRLLGEFYNYNL 319
Query: 754 VDSSVIFDTLYLILVFGH 771
+ +++FDTLYL L +GH
Sbjct: 320 IPHALVFDTLYLFLHYGH 337
>gi|413937884|gb|AFW72435.1| hypothetical protein ZEAMMB73_315437 [Zea mays]
Length = 501
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 90/107 (84%), Positives = 102/107 (95%)
Query: 669 KLPWSDCESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLE 728
KLPW++C+ YLLKCF+KVHKGKY Q+HLIA LTA LSRYHD+FAVAVVDEVLEEIR+GLE
Sbjct: 8 KLPWAECQQYLLKCFLKVHKGKYSQVHLIALLTASLSRYHDDFAVAVVDEVLEEIRVGLE 67
Query: 729 LNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHGTAE 775
LNDYGMQQRRLAHMRFLGELY+Y+H+DSSV+FDTLYLI+VFGHGT E
Sbjct: 68 LNDYGMQQRRLAHMRFLGELYSYKHIDSSVVFDTLYLIIVFGHGTPE 114
>gi|167538272|ref|XP_001750801.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163770718|gb|EDQ84400.1| predicted protein [Monosiga brevicollis MX1]
Length = 1351
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 103/211 (48%), Positives = 144/211 (68%), Gaps = 5/211 (2%)
Query: 564 LDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENA 623
L+ FT N+++ NLL+TCGRFLYRSPET +R +L +M+ K V D R++T++ NA
Sbjct: 713 LNKFTGQNVEMLTNLLDTCGRFLYRSPETHVRTKALLATMMK-KKVALHDERYLTMIANA 771
Query: 624 YYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSS--IEHVLRQLRKLPWSDCE--SYL 679
YY C PPER+ KVRPPLH Y+RKLL+ DL + ++ +L +LRKLPWSD Y
Sbjct: 772 YYYCNPPERALIEVKVRPPLHDYLRKLLYKDLKPKADVVKSLLPKLRKLPWSDPVFFQYG 831
Query: 680 LKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRL 739
LKCF++ K+ +I +ASL +GL + + + AVVD VLEEIRLG+E+N + QRR+
Sbjct: 832 LKCFVRAWLLKFDEIMALASLLSGLRDHVPQLSYAVVDAVLEEIRLGMEINTPDINQRRV 891
Query: 740 AHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
A ++FL EL+N+ VDS VI +TLY ++ F
Sbjct: 892 ATVKFLSELFNFTLVDSGVILNTLYSLISFA 922
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 138/507 (27%), Positives = 229/507 (45%), Gaps = 55/507 (10%)
Query: 67 LHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIGIIEDSS 126
LH+RY++F+ L+ + D +A + R T +L E+ IG+ + +
Sbjct: 128 LHRRYEEFADGFRQALVAILATTPDKADKEALAHF-----RFTFRLFAEMVLIGVFNEDN 182
Query: 127 IFINIIKDLTS-IEHLKDRDTTQTNLTLLASFARQGRIFLGLPLSGPGQE--IYEEFFKG 183
+ K + + ++ K+ D ++ L+ A L L P ++ I +F
Sbjct: 183 EGKELCKRIANYLKKDKEFDLLALSVHLVEHLA------LDLAAQLPREQLGILHKF--E 234
Query: 184 LNITADQ-----KKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENS 238
L T D K +Y+ V E L E +L + ++ + KGELS E S
Sbjct: 235 LEATLDTPFPDLAPNMKALLVRWYSKVAERLVREKKALDKRLRQDQNQVEIKGELSSERS 294
Query: 239 SSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASGKDSSVPE-- 296
++ +Y L + LA LD P +P + SG ++ + PE
Sbjct: 295 EGTRAMQSAYTELLQYTKVLANVLDQDMPDLPVAPAEDELMSGVVVDTSNPFKNLNPEDA 354
Query: 297 --PVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLA 354
+W D E + FYE LPDL+A +P VL ++ + + K E+ A D+G
Sbjct: 355 ASSLWVDVEEQEFYEHLPDLQARLPEVLFASSKKQRRKLRKKAEEE----AGAQDEGASE 410
Query: 355 AQDTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDK 414
+ E D PEG+ + G+++ ++E E +D + ++ D ++K A P+
Sbjct: 411 GEQEGESPGD---GPEGEVEDDGEEEVDEEAELREDANLDE---YDVDQKAPLTAGPPEG 464
Query: 415 EKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRK 474
G + A L++LP ++ D +D+L EFCYLN R+
Sbjct: 465 --------------------GTANDKIVAFLEQLPNSMTTDAVDRLAEEFCYLNDSGARR 504
Query: 475 RLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIET 534
RL ALF V R ++LL YY+R+VATL + +V + LI+ L EF FL K IE+
Sbjct: 505 RLAEALFMVNRNRVDLLRYYARLVATLYPGIPEVGTELIKSLNGEFRFLYFKHPADRIES 564
Query: 535 KIRNIRFIGELCKFKIAPAGLVFSCLK 561
K++N+R+IGEL KF++ P V ++
Sbjct: 565 KVKNMRYIGELIKFRVFPINDVMRIMR 591
>gi|33589280|gb|AAQ22407.1| SD07232p [Drosophila melanogaster]
Length = 698
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 164/572 (28%), Positives = 261/572 (45%), Gaps = 65/572 (11%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKK-------RSTLKLL 113
+ + S LH Y DF ++ K N+KA +K R L+L
Sbjct: 159 VTLASRLHCTYADFDVHFLEAWQKAL-------------NIKATEKIGNPSKLRVDLRLF 205
Query: 114 LELYFIGIIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGL---PL 169
EL G+I+ + L + L D +N +++ SF R G + GL +
Sbjct: 206 AELVSSGVIQMKPGLAQLGVVLVHLIALDKDD--HSNFSIILSFCRHCGEEYAGLVPQKM 263
Query: 170 SGPGQEIYEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNA 229
+ E K +TAD++ + Y+ A+ + + AE L M + +
Sbjct: 264 QQLATKYGVEVPKSDFLTADKQLNLRTMLKGYFKALCKHVLAEQAELMNMTKNIRRTMEC 323
Query: 230 KGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASG 289
KGE+S E E ++ +D L + SL+E L P + ++ E +P +
Sbjct: 324 KGEISTEKREKCELMQAGFDKLLASAQSLSELLGEPLPELAKE--------SEGCNPGTV 375
Query: 290 KDS-------SVPEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPT 342
D+ V +P W DEETRAFY LPDLR F+P A + ++ LE+P+
Sbjct: 376 IDNMLDSASFGVLDP-WGDEETRAFYTDLPDLRQFLP-------NFSAPKVDLETLEEPS 427
Query: 343 DPASEPDQGQLAAQDTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKE 402
+ E L A+ DL P S E +E+ P E
Sbjct: 428 ELTEEAIDANLDAE------MDLDDPP---STTSDTTPENPIEEQPTTPVAAA------E 472
Query: 403 EKDKEKAKDPDKEKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTV 462
+ +K + E G+++ + ++ +++ D L L CV+++LID +
Sbjct: 473 DLKPQKMGNALMELGRQQQQQSQLNQNPIQIQNQMRQQFDGFLVNLFNCVNKELIDSAAI 532
Query: 463 EFCY-LNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFN 521
EF N+K RK+L R +F+V RT L++LPY SR VA + C DV++ L ++L +EF
Sbjct: 533 EFLLNFNTKHQRKKLTRTIFSVQRTRLDILPYLSRFVAIVHMCNTDVATDLAELLRKEFK 592
Query: 522 FLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLET 581
+ I+KK+Q+NIETK++ +RFIGEL KF + CLK L DF HH I++AC +E
Sbjct: 593 WHIHKKNQLNIETKLKIVRFIGELVKFGLFKKFDALGCLKMLLRDFQHHQIEMACAFVEV 652
Query: 582 CGRFLYRSPETSIRMANMLEILMRLKNVKNLD 613
G +LY + + M L+ ++RLK +D
Sbjct: 653 TGVYLYNCRDARLLMNVFLDQMLRLKTATAMD 684
>gi|341882633|gb|EGT38568.1| hypothetical protein CAEBREN_03289 [Caenorhabditis brenneri]
Length = 1140
Score = 187 bits (474), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 183/739 (24%), Positives = 336/739 (45%), Gaps = 96/739 (12%)
Query: 62 KICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIGI 121
++C + +Y +FS + G K P K +D+ K R + L EL G+
Sbjct: 104 ELCLAISAKYSNFSEQMA-GEFKKVLPVKK-----SDKIANVAKLRVDIIFLAELCLCGV 157
Query: 122 IEDSSIFINIIKDLTSIEHLKDRDTTQ-TNLTLLASFAR----QGRIFLGLPLSGPGQEI 176
+ + ++ + S +L D T+ N+ LLA+ +R Q + +PL+ + I
Sbjct: 158 FNEKE-GLQVLGAVLS--YLIQTDKTEFVNVGLLATVSRTVGWQIANIVPIPLTDDVETI 214
Query: 177 YEEFFKG-----LNITADQKKIFKKAFHTYYNAV----QELLQAEHTSLRQMENENAKIL 227
E +G ++ DQKK+ + ++YY+A+ ++ A + ++++++ +
Sbjct: 215 --EIQRGDLPSSSALSDDQKKMIRDLLNSYYDALYSKTEKTCSARNKAMKKVKRQE---- 268
Query: 228 NAKGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPA 287
+G+ ++E +++ +L+ D L + S +A A+ ++ + P + + E A+
Sbjct: 269 RVRGDAADEEKATFNQLQNELDSLQKLASEIACAIGVK--MKPLNQEASDDEEDEAANLE 326
Query: 288 SGKD-SSVPEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPAS 346
G+ + +W DEET+AFYE L DLR VP L ++E +
Sbjct: 327 MGRRLAEGAIKLWSDEETKAFYEDLIDLRQMVPKDLYKDSEQRT---------------- 370
Query: 347 EPDQGQLAAQDTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDK 406
L+ AE D+ D E + A D K D
Sbjct: 371 ------LSKATMAERIEDI-------------DVENVNEAGAVD-----AKRSSMTRADS 406
Query: 407 EKAKDPDKEKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCY 466
EK PD ++ E +E + + LD L VS+ D+ F
Sbjct: 407 EKETSPDDSYLQQYLKEAGESSEDRGVNKWQKFVLD-----LDHLVSKYSTDKAAEYFVS 461
Query: 467 -LNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLIN 525
LN+K RKRLV+ + P T ++++P+Y+R++ATL M D+++ ++ L E+F +
Sbjct: 462 NLNNKGCRKRLVKLMIEPPPTRIDVVPFYARLIATLENVMPDLTTEIVTQLLEKFRAFLQ 521
Query: 526 KKDQMN-----IETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLE 580
K N +E+K+ + I EL KF + SCL+ + D H++++ +E
Sbjct: 522 YKPSSNSIAIKVESKMVCVMMIAELMKFGVISRAEGLSCLRQLVYDLRGHSVEMTATFME 581
Query: 581 TCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSA------ 634
+ G +LYR E+ +M +LE++ + K + D R L++NAY+ C PPE S
Sbjct: 582 SGGLYLYRHTESHAKMKRLLEVV-KAKRDRMKDQRQAMLIDNAYFTCLPPEDSKEERLRL 640
Query: 635 RVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYG 692
++ + P+ ++IR ++ D+++ +++ L+ R+L WSD E Y ++
Sbjct: 641 KLDEEDTPMKRFIRHIVL-DINEENVDVFLKCFRRLDWSDPEISDYAIRYLSSTWLLPIE 699
Query: 693 QIHLIASLTAGLS--RYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYN 750
+ +AS AGL ++ +AV+D +E IR+ LE N Q + +L ELY+
Sbjct: 700 NLQHVASAIAGLCNLQHLQWIGMAVIDATIETIRISLE-NPGSFNQWAHSAAVYLAELYS 758
Query: 751 YEHVDSSVIFDTLYLILVF 769
+E D +I LY I+ +
Sbjct: 759 FELCDEDLILQVLYQIISY 777
>gi|85683013|gb|ABC73482.1| CG2253 [Drosophila miranda]
Length = 383
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 125/408 (30%), Positives = 202/408 (49%), Gaps = 33/408 (8%)
Query: 231 GELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASGK 290
GE+S E E ++ S+D L + +L+E L P + ++ E SP +
Sbjct: 1 GEISSEKREKCEMMQASFDKLLASAQTLSELLAEPLPQLAKE--------SECCSPGTVI 52
Query: 291 DS-------SVPEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTD 343
D+ V +P W DEETRAFY LPDLR F+P + A + ++ +E+P++
Sbjct: 53 DNMLDSAAFGVLDP-WGDEETRAFYTDLPDLRQFLP-------DFSAPKVDLETMEEPSE 104
Query: 344 PASEPDQGQLAAQDTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEE 403
E L A+ + + P +++ + ++ P G +
Sbjct: 105 LTEEAIDANLDAEMDIDDPPSTNSDPPSENIAE-------DQPPPSTPPLLATTGSSAND 157
Query: 404 KDKEKAKDPDKEKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVE 463
+K E G+++ + + + D L L CV+++LID +E
Sbjct: 158 LKPQKMCSALMELGRQQ--LQSQPQTTAQTQQQIRQQFDIFLVNLFNCVNKELIDSAAIE 215
Query: 464 FCY-LNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNF 522
F N+K RK+L R +F+V RT L++LPY SR +A + C DV++ L ++L +EF +
Sbjct: 216 FLLNFNTKHQRKKLTRTIFSVQRTRLDILPYLSRFMAIVHMCNTDVAADLSELLRKEFKW 275
Query: 523 LINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETC 582
I KK+Q+NIE+K++ +RFIGE KF + CLK L DF HH I++AC +E
Sbjct: 276 HIRKKNQLNIESKLKIVRFIGEQVKFGLFKKFDALGCLKMLLRDFQHHQIEMACAFVEVT 335
Query: 583 GRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPP 630
G +LY ++ + M L+ ++RLK +D RH +E+ YYL KPP
Sbjct: 336 GVYLYNCRDSRLLMNVFLDQMLRLKMATAMDSRHAAQIESVYYLVKPP 383
>gi|341900055|gb|EGT55990.1| hypothetical protein CAEBREN_25918 [Caenorhabditis brenneri]
Length = 1140
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 183/739 (24%), Positives = 335/739 (45%), Gaps = 96/739 (12%)
Query: 62 KICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIGI 121
++C + +Y +FS + G K P K +D+ K R + L EL G+
Sbjct: 104 ELCLAISAKYSNFSEQMA-GEFKKVLPVKK-----SDKIANVAKLRVDIIFLAELCLCGV 157
Query: 122 IEDSSIFINIIKDLTSIEHLKDRDTTQ-TNLTLLASFAR----QGRIFLGLPLSGPGQEI 176
+ + ++ + S +L D T+ N+ LLA+ +R Q + +PL+ + I
Sbjct: 158 FNEKE-GLQVLGAVLS--YLIQTDKTEFVNVGLLATVSRTVGWQIANIVPIPLTDDVETI 214
Query: 177 YEEFFKG-----LNITADQKKIFKKAFHTYYNAV----QELLQAEHTSLRQMENENAKIL 227
E +G ++ DQKK + ++YY+A+ ++ A + ++++++ +
Sbjct: 215 --EIQRGDLPSSSALSDDQKKTIRDLLNSYYDALYLKTEKTCSARNKAMKKVKRQE---- 268
Query: 228 NAKGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPA 287
+G+ ++E +++ +L+ D L + S +A A+ ++ + P + + E A+
Sbjct: 269 RVRGDAADEEKATFNQLQNELDSLQKLASEIACAIGVK--MKPLNQEASDDEEDEAANLE 326
Query: 288 SGKD-SSVPEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPAS 346
G+ + +W DEET+AFYE L DLR VP L ++E +
Sbjct: 327 MGRRLAEGAIKLWSDEETKAFYEDLIDLRQMVPKDLYKDSEQRT---------------- 370
Query: 347 EPDQGQLAAQDTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDK 406
L+ AE D+ D E + A D K D
Sbjct: 371 ------LSKAKMAERIEDI-------------DVENVNEAGAVD-----AKRSSMTRADS 406
Query: 407 EKAKDPDKEKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCY 466
EK PD ++ E +E + + LD L VS+ D+ F
Sbjct: 407 EKETSPDDSYLQQYLKEAGESSEDRGVNKWQKFVLD-----LDHLVSKYSTDKAAEYFVS 461
Query: 467 -LNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLIN 525
LN+K RKRLV+ + P T ++++P+Y+R++ATL M D+++ ++ L E+F +
Sbjct: 462 NLNNKGCRKRLVKLMIEPPPTRIDVVPFYARLIATLENVMPDLTTEIVTQLLEKFRAFLQ 521
Query: 526 KKDQMN-----IETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLE 580
K N +E+K+ + I EL KF + SCL+ + D H++++ +E
Sbjct: 522 YKPSSNSIAIKVESKMVCVMMIAELMKFGVISRAEGLSCLRQLVYDLRGHSVEMTATFME 581
Query: 581 TCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSA------ 634
+ G +LYR E+ +M +LE++ + K + D R L++NAY+ C PPE S
Sbjct: 582 SGGLYLYRHTESHAKMKRLLEVV-KAKRDRMKDQRQAMLIDNAYFTCLPPEDSKEERLRL 640
Query: 635 RVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYG 692
++ + P+ ++IR ++ D+++ +++ L+ R+L WSD E Y ++
Sbjct: 641 KLDEEDTPMKRFIRHIVL-DINEENVDVFLKCFRRLDWSDPEISDYAIRYLSSTWLLPIE 699
Query: 693 QIHLIASLTAGLS--RYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYN 750
+ +AS AGL ++ +AV+D +E IR+ LE N Q + +L ELY+
Sbjct: 700 NLQHVASAIAGLCNLQHLQWIGMAVIDATIETIRISLE-NPGSFNQWAHSAAVYLAELYS 758
Query: 751 YEHVDSSVIFDTLYLILVF 769
+E D +I LY I+ +
Sbjct: 759 FELCDEDLILQVLYQIISY 777
>gi|444724372|gb|ELW64977.1| Regulator of nonsense transcripts 2 [Tupaia chinensis]
Length = 1125
Score = 186 bits (471), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 93/188 (49%), Positives = 120/188 (63%), Gaps = 2/188 (1%)
Query: 585 FLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLH 644
FL + P R E +MR K +LD R+VT+VENAYY C PP V K RPPL
Sbjct: 569 FLQQLPNCVNRDLIDKEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQ 628
Query: 645 QYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTA 702
+Y+RKLL+ DL K + E VLRQ+RKLPW D E Y++ C + + KY IH +A+L A
Sbjct: 629 EYVRKLLYKDLSKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLA 688
Query: 703 GLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDT 762
GL Y ++ + VVD VLE+IRLG+E+N QRR++ +FLGELYNY V+S+VIF T
Sbjct: 689 GLVLYQEDVGIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRT 748
Query: 763 LYLILVFG 770
LY FG
Sbjct: 749 LYSFTSFG 756
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 153/612 (25%), Positives = 262/612 (42%), Gaps = 130/612 (21%)
Query: 63 ICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIGII 122
+CSL HQRY DF+ L+ K F E ++ K R+ L+ + EL +GI
Sbjct: 224 LCSLFHQRYADFASSLLQVWKKHF------EARKEEKTPNITKLRTDLRFIAELTIVGIF 277
Query: 123 EDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGL---PLSGPGQEIYE 178
D I + L +I + DR++ T+++++ SF R G GL + ++
Sbjct: 278 TDKEGLSLIYEQLKNIINA-DRES-HTHVSVVISFCRHCGDDIAGLVPRKVKSAAEKFNL 335
Query: 179 EFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENS 238
F I+ ++++ F+ Y+ ++ + L+ +H L+ E +N +IL++KGELSE+
Sbjct: 336 SFPPSEIISPEKQQPFQNLLKEYFTSLTKHLKRDHRELQNTERQNRRILHSKGELSEDRH 395
Query: 239 SSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTS-GEDA-SPASGKDSSVPE 296
YE+ SY L N SLA+ LD P +P+D T G D +P + +
Sbjct: 396 KQYEEFAMSYQKLLANSQSLADLLDENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDLEG 455
Query: 297 PVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDP--ASEPDQGQLA 354
+W+DE+ R FYE L DL+AFVPA+L + E N+ S K DP A EP
Sbjct: 456 GIWEDEDARNFYENLIDLKAFVPAILFKDNEKSQNKESNK-----DDPKEAKEP------ 504
Query: 355 AQDTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDK 414
+D E+S SP+ D E + + + D + +G D +A+D K
Sbjct: 505 -KDNKEIS-----SPD--------DLELELENLEINDDTLELEGGD-------EAEDLTK 543
Query: 415 EKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQ--------------- 459
+ E++ E + + LK + +DA LQ+LP CV+RDLID+
Sbjct: 544 KLLDEQEQEDEEASTGSHLKLI----VDAFLQQLPNCVNRDLIDKEQMMRKKQAMHLDAR 599
Query: 460 ----LTVEFCYLN---------------------------SKSNRKRLVRALFNVPRTSL 488
+ + Y N SK ++++R + +P
Sbjct: 600 YVTMVENAYYYCNPPPAEKTVKKKRPPLQEYVRKLLYKDLSKVTTEKVLRQMRKLPWQDQ 659
Query: 489 ELLPY------------------YSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQM 530
E+ Y + ++A L +DV ++ + E+ +
Sbjct: 660 EVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDVGIHVVDGVLEDIRLGMEVNQPK 719
Query: 531 NIETKIRNIRFIGELCKFKIAPAGLVFSCL-------------KACLDDFTH-HNIDVAC 576
+ +I + +F+GEL +++ + ++F L + LD H I + C
Sbjct: 720 FNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFGVNPDGSPSSLDPPEHLFRIRLVC 779
Query: 577 NLLETCGRFLYR 588
+L+TCG++ R
Sbjct: 780 TILDTCGQYFDR 791
>gi|25149485|ref|NP_500974.2| Protein SMG-3, isoform a [Caenorhabditis elegans]
gi|148614331|gb|ABQ96385.1| SMG-3 [Caenorhabditis elegans]
gi|351059323|emb|CCD74166.1| Protein SMG-3, isoform a [Caenorhabditis elegans]
Length = 1142
Score = 182 bits (462), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 179/741 (24%), Positives = 338/741 (45%), Gaps = 101/741 (13%)
Query: 62 KICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIGI 121
++C + +Y +FS + G K P K +D+ K R + L EL G+
Sbjct: 104 ELCLAISAKYSNFSEQMA-GEFKKVLPVKK-----SDKIANVAKLRVDIIFLAELCLCGV 157
Query: 122 IEDSSIFINIIKDLTSIEHLKDRDTTQ-TNLTLLASFARQ--GRIFLGLPLSGPGQEIYE 178
+ + ++ + S +L D T N+ LLA+ +R +I +P+ E E
Sbjct: 158 FNEKE-GLQVLGAVLS--YLIQTDKTDFVNVGLLATVSRTVGWQIANIVPIPMDDAETVE 214
Query: 179 ----EFFKGLNITADQKKIFKKAFHTYYNAV----QELLQAEHTSLRQMENENAKILNAK 230
E + ++ +QKK ++ F +YY+++ ++ A + ++++++ + ++
Sbjct: 215 IQDEELPESSALSVEQKKSIRELFKSYYDSLYSKTEKTCSARNKAMKRVKRQE----RSR 270
Query: 231 GELSEENSSSYEKLRKSYDHLYRNVSSLAEAL--DMQP----PVMPEDVHTTRVTSGEDA 284
G+ +E ++ L+ D L + ++ A+ +M+P E+ + G
Sbjct: 271 GDAGDEEKTTLNDLQSELDSLRKMAIEISSAIGVEMKPLKEEASDDEEDEAANLEMGRKL 330
Query: 285 SPASGKDSSVPEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDP 344
+ + K +W DEET+AFYE L DLR VP L E+E + + K E+ D
Sbjct: 331 AEGAIK-------LWSDEETKAFYEDLIDLRQMVPKDLYKESEQRTLSKA-KMAERIEDV 382
Query: 345 ASEPDQGQLAAQDTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEK 404
D ++ + S+++G E EK P+ + + KE
Sbjct: 383 ------------DMENINESGAMDAKRSSLQRG------ESEKETTPEDSQLQALLKE-- 422
Query: 405 DKEKAKDPDKEKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEF 464
A D +E+G K + + L VS+ DQ + F
Sbjct: 423 ----AVDASEERGVSK--------------------WQSFVLDLDHLVSKYSTDQAAIYF 458
Query: 465 CY-LNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFL 523
LN+K RKRLV+ + + P + ++++P+Y+R+VATL M D+++ ++ L E+F
Sbjct: 459 VSNLNNKGCRKRLVKLMIDPPPSRIDVVPFYARLVATLENVMPDLTTEIVTQLLEKFRGF 518
Query: 524 INKKDQ-----MNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNL 578
+ +K + +E+K+ + I EL KF + SCL+ + D H++++
Sbjct: 519 LQQKPSSATAIIKVESKMVCVMMIAELMKFGVISRAEGLSCLRQLVYDLRGHSVEMTATF 578
Query: 579 LETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSA---- 634
+E+ G +LYR E+ +M +LE++ + K + D R L++NAY+ C PPE S
Sbjct: 579 MESSGLYLYRHTESHAKMKRLLEVV-KAKRERMKDQRQAMLIDNAYFTCLPPEDSKEERL 637
Query: 635 --RVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGK 690
++ + P+ ++IR ++ D+++S+++ L+ LR+L W D E Y ++
Sbjct: 638 RLKLDEEDTPMKRFIRHIIL-DINESTVDVFLKCLRRLEWYDPEVADYAIRYLSSTWLLP 696
Query: 691 YGQIHLIASLTAGLSR--YHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGEL 748
+ +AS AGL + +AV+D +E IR+ LE N Q + +L EL
Sbjct: 697 IENLQHVASAIAGLCNLVHLQWIGMAVIDSTIETIRISLE-NPGVYNQWAHSAAVYLAEL 755
Query: 749 YNYEHVDSSVIFDTLYLILVF 769
Y++E D ++ LY ++ +
Sbjct: 756 YSFELCDEDLVLKILYQLISY 776
>gi|344239320|gb|EGV95423.1| Regulator of nonsense transcripts 2 [Cricetulus griseus]
Length = 540
Score = 182 bits (462), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 88/169 (52%), Positives = 113/169 (66%), Gaps = 2/169 (1%)
Query: 604 MRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHV 663
MR K +LD R+VT+VENAYY C PP V K RPPL +Y+RKLL+ DL K + E V
Sbjct: 1 MRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVRKKRPPLQEYVRKLLYKDLSKVTTEKV 60
Query: 664 LRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLE 721
LRQ+RKLPW D E Y++ C + + KY IH +A+L AGL Y ++ + VVD VLE
Sbjct: 61 LRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDVGIHVVDGVLE 120
Query: 722 EIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
+IRLG+E+N QRR++ +FLGELYNY V+S+VIF TLY FG
Sbjct: 121 DIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFG 169
>gi|193206952|ref|NP_001122827.1| Protein SMG-3, isoform b [Caenorhabditis elegans]
gi|351059351|emb|CCD74194.1| Protein SMG-3, isoform b [Caenorhabditis elegans]
Length = 1144
Score = 182 bits (462), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 179/741 (24%), Positives = 338/741 (45%), Gaps = 101/741 (13%)
Query: 62 KICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIGI 121
++C + +Y +FS + G K P K +D+ K R + L EL G+
Sbjct: 104 ELCLAISAKYSNFSEQMA-GEFKKVLPVKK-----SDKIANVAKLRVDIIFLAELCLCGV 157
Query: 122 IEDSSIFINIIKDLTSIEHLKDRDTTQ-TNLTLLASFARQ--GRIFLGLPLSGPGQEIYE 178
+ + ++ + S +L D T N+ LLA+ +R +I +P+ E E
Sbjct: 158 FNEKE-GLQVLGAVLS--YLIQTDKTDFVNVGLLATVSRTVGWQIANIVPIPMDDAETVE 214
Query: 179 ----EFFKGLNITADQKKIFKKAFHTYYNAV----QELLQAEHTSLRQMENENAKILNAK 230
E + ++ +QKK ++ F +YY+++ ++ A + ++++++ + ++
Sbjct: 215 IQDEELPESSALSVEQKKSIRELFKSYYDSLYSKTEKTCSARNKAMKRVKRQE----RSR 270
Query: 231 GELSEENSSSYEKLRKSYDHLYRNVSSLAEAL--DMQP----PVMPEDVHTTRVTSGEDA 284
G+ +E ++ L+ D L + ++ A+ +M+P E+ + G
Sbjct: 271 GDAGDEEKTTLNDLQSELDSLRKMAIEISSAIGVEMKPLKEEASDDEEDEAANLEMGRKL 330
Query: 285 SPASGKDSSVPEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDP 344
+ + K +W DEET+AFYE L DLR VP L E+E + + K E+ D
Sbjct: 331 AEGAIK-------LWSDEETKAFYEDLIDLRQMVPKDLYKESEQRTLSKA-KMAERIEDV 382
Query: 345 ASEPDQGQLAAQDTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEK 404
D ++ + S+++G E EK P+ + + KE
Sbjct: 383 ------------DMENINESGAMDAKRSSLQRG------ESEKETTPEDSQLQALLKE-- 422
Query: 405 DKEKAKDPDKEKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEF 464
A D +E+G K + + L VS+ DQ + F
Sbjct: 423 ----AVDASEERGVSK--------------------WQSFVLDLDHLVSKYSTDQAAIYF 458
Query: 465 CY-LNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFL 523
LN+K RKRLV+ + + P + ++++P+Y+R+VATL M D+++ ++ L E+F
Sbjct: 459 VSNLNNKGCRKRLVKLMIDPPPSRIDVVPFYARLVATLENVMPDLTTEIVTQLLEKFRGF 518
Query: 524 INKKDQ-----MNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNL 578
+ +K + +E+K+ + I EL KF + SCL+ + D H++++
Sbjct: 519 LQQKPSSATAIIKVESKMVCVMMIAELMKFGVISRAEGLSCLRQLVYDLRGHSVEMTATF 578
Query: 579 LETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSA---- 634
+E+ G +LYR E+ +M +LE++ + K + D R L++NAY+ C PPE S
Sbjct: 579 MESSGLYLYRHTESHAKMKRLLEVV-KAKRERMKDQRQAMLIDNAYFTCLPPEDSKEERL 637
Query: 635 --RVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGK 690
++ + P+ ++IR ++ D+++S+++ L+ LR+L W D E Y ++
Sbjct: 638 RLKLDEEDTPMKRFIRHIIL-DINESTVDVFLKCLRRLEWYDPEVADYAIRYLSSTWLLP 696
Query: 691 YGQIHLIASLTAGLSR--YHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGEL 748
+ +AS AGL + +AV+D +E IR+ LE N Q + +L EL
Sbjct: 697 IENLQHVASAIAGLCNLVHLQWIGMAVIDSTIETIRISLE-NPGVYNQWAHSAAVYLAEL 755
Query: 749 YNYEHVDSSVIFDTLYLILVF 769
Y++E D ++ LY ++ +
Sbjct: 756 YSFELCDEDLVLKILYQLISY 776
>gi|256269422|gb|EEU04717.1| Nmd2p [Saccharomyces cerevisiae JAY291]
Length = 1086
Score = 182 bits (462), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 112/359 (31%), Positives = 189/359 (52%), Gaps = 14/359 (3%)
Query: 420 KDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEF--CYLNSKSNRKRLV 477
K E ++ EK V N++ L +D+ID L+ + YL++K+ R R++
Sbjct: 356 KTVEESQSSKTEKDSNVNSKNINLFFTDLEMADCKDIIDDLSNRYWSSYLDNKATRNRIL 415
Query: 478 RALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIR 537
+ F + LP YSR +AT S M ++ S I L+ F ++ +++N+ +
Sbjct: 416 K--FFMETQDWSKLPVYSRFIATNSKYMPEIVSEFINYLDNGFRSQLHS-NKINV----K 468
Query: 538 NIRFIGELCKFKIAPAGLVFSCLKACLDDF-THHNIDVACNLLETCGRFLYRSPETSIRM 596
NI F E+ KF++ P+ ++F ++ + + +N+++ LLE G+FL PE M
Sbjct: 469 NIIFFSEMIKFQLIPSFMIFHKIRTLIMNMQVPNNVEILTVLLEHSGKFLLNKPEYKELM 528
Query: 597 ANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPE-RSARVS-KVRPPLHQYIRKLLFSD 654
M++++ KN + L+ +EN L PP +S V+ K P Q+ R L+ S+
Sbjct: 529 EKMVQLIKDKKNDRQLNMNMKGALENIITLLYPPSVKSLNVTVKTITPEQQFYRILIRSE 588
Query: 655 LDKSSIEHVLRQLRKLPWSDC--ESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFA 712
L +HV++ +RK W D + L F K HK Y I L+ + GL Y +F
Sbjct: 589 LSSLDFKHVVKLVRKAHWDDVAIQKVLFSLFSKPHKISYQNIPLLTKVLGGLYSYRRDFV 648
Query: 713 VAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
+ +D+VLE I GLE+NDYG R++++R+L E++N+E + S V+ DT+Y I+ FGH
Sbjct: 649 IRCIDQVLENIERGLEINDYGQNMHRISNVRYLTEIFNFEMIKSDVLLDTIYHIIRFGH 707
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 132/318 (41%), Gaps = 37/318 (11%)
Query: 37 KYIANIYIYTYTLLLGLWLT---LVYFLKICSLLHQRYKD-FSPCLIDGLLKVFFPGKSG 92
KY++ I + LL + ++ ++I S LHQR+ F+ L+ L+ F
Sbjct: 68 KYLSEIIVTVTECLLNVLNKNDDVIAAVEIISGLHQRFNGRFTSPLLGAFLQAF--ENPS 125
Query: 93 EDLDADRN--LKAMKKRSTLKLLLELYFIGIIEDSSIFINIIKDLTSIEHLKDRDTTQTN 150
D++++R+ + + + L++ ELY +G+ ++ I+ +I + + T + +
Sbjct: 126 VDIESERDELQRITRVKGNLRVFTELYLVGVFRT----LDDIESKDAIPNFLQKKTGRKD 181
Query: 151 LTLLASFARQ---GRIFLGL-------------PLSGPGQEIYEEFFKGLNITADQKKIF 194
LL S R+ + LG PL +++ + + +F
Sbjct: 182 -PLLFSILREILNYKFKLGFTTTIATAFIKKFAPLFRDDDNSWDDLIYDSKLKGALQSLF 240
Query: 195 KKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYRN 254
K + EL H + +++ E+ K G+L +E Y+KL + +
Sbjct: 241 KNFIDATFARATEL----HKKVNKLQREHQKCQIRTGKLRDEYVEEYDKLLPIFIRFKTS 296
Query: 255 VSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASGKDSSVP-EPVWDDEETRAFYECLPD 313
+L E ++ +PE + E ASP P + +W++E+TR FYE LPD
Sbjct: 297 AITLGEFFKLE---IPELEGASNDDLKETASPMITNQILPPNQRLWENEDTRKFYEILPD 353
Query: 314 LRAFVPAVLLGEAEHKAN 331
+ V + E +N
Sbjct: 354 ISKTVEESQSSKTEKDSN 371
>gi|151944022|gb|EDN62315.1| protein involved in the nonsense-mediated mRNA decay (NMD) pathway
[Saccharomyces cerevisiae YJM789]
Length = 1087
Score = 182 bits (462), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 111/359 (30%), Positives = 189/359 (52%), Gaps = 14/359 (3%)
Query: 420 KDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEF--CYLNSKSNRKRLV 477
K E ++ EK V N++ L +D+ID L+ + YL++K+ R R++
Sbjct: 355 KTVEESQSSKTEKDSNVNSKNINLFFTDLEMADCKDIIDDLSNRYWSSYLDNKATRNRIL 414
Query: 478 RALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIR 537
+ F + LP YSR +AT S M ++ S I L+ F ++ +++N+ +
Sbjct: 415 K--FFMETQDWSKLPVYSRFIATNSKYMPEIVSEFINYLDNGFRSQLHS-NKINV----K 467
Query: 538 NIRFIGELCKFKIAPAGLVFSCLKACLDDF-THHNIDVACNLLETCGRFLYRSPETSIRM 596
NI F E+ KF++ P+ ++F ++ + + +N+++ LLE G+FL PE M
Sbjct: 468 NIIFFSEMIKFQLIPSFMIFHKIRTLIMNMQVPNNVEILTVLLEHSGKFLLNKPEYKELM 527
Query: 597 ANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPE-RSARVS-KVRPPLHQYIRKLLFSD 654
M++++ KN + L+ +EN L PP +S V+ K P Q+ R L+ S+
Sbjct: 528 EKMVQLIKDKKNDRQLNMNMKGALENIITLLYPPSVKSLNVTVKTITPEQQFYRILIRSE 587
Query: 655 LDKSSIEHVLRQLRKLPWSDC--ESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFA 712
L +H+++ +RK W D + L F K HK Y I L+ + GL Y +F
Sbjct: 588 LSSLDFKHIVKLVRKAHWDDVAIQKVLFSLFSKPHKISYQNIPLLTKVLGGLYSYRRDFV 647
Query: 713 VAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
+ +D+VLE I GLE+NDYG R++++R+L E++N+E + S V+ DT+Y I+ FGH
Sbjct: 648 IKCIDQVLENIERGLEINDYGQNMHRISNVRYLTEIFNFEMIKSDVLLDTIYHIIRFGH 706
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 132/318 (41%), Gaps = 37/318 (11%)
Query: 37 KYIANIYIYTYTLLLGLWLT---LVYFLKICSLLHQRYKD-FSPCLIDGLLKVFFPGKSG 92
KY++ I + LL + ++ ++I S LHQR+ F+ L+ L+ F
Sbjct: 67 KYLSEIIVTVTECLLNVLNKNDDVIAAVEIISGLHQRFNGRFTSPLLGAFLQAF--ENPS 124
Query: 93 EDLDADRN--LKAMKKRSTLKLLLELYFIGIIEDSSIFINIIKDLTSIEHLKDRDTTQTN 150
D++++R+ + + + L++ ELY +G+ ++ I+ +I + + T + +
Sbjct: 125 VDIESERDELQRITRVKGNLRVFTELYLVGVFRT----LDDIESKDAIPNFLQKKTGRKD 180
Query: 151 LTLLASFARQ---GRIFLGL-------------PLSGPGQEIYEEFFKGLNITADQKKIF 194
LL S R+ + LG PL +++ + + +F
Sbjct: 181 -PLLFSILREILNYKFKLGFTTTIATAFIKKFAPLFRDDDNSWDDLIYDSKLKGALQSLF 239
Query: 195 KKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYRN 254
K + EL H + +++ E+ K G+L +E Y+KL + +
Sbjct: 240 KNFIDATFARATEL----HKKVNKLQREHQKCQIRTGKLRDEYVEEYDKLLPIFIRFKTS 295
Query: 255 VSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASGKDSSVP-EPVWDDEETRAFYECLPD 313
+L E ++ +PE + E ASP P + +W++E+TR FYE LPD
Sbjct: 296 AITLGEFFKLE---IPELEGASNDDLKETASPMITNQILPPNQRLWENEDTRKFYEILPD 352
Query: 314 LRAFVPAVLLGEAEHKAN 331
+ V + E +N
Sbjct: 353 ISKTVEESQSSKTEKDSN 370
>gi|349578628|dbj|GAA23793.1| K7_Nmd2p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 1087
Score = 182 bits (461), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 111/359 (30%), Positives = 189/359 (52%), Gaps = 14/359 (3%)
Query: 420 KDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEF--CYLNSKSNRKRLV 477
K E ++ EK V N++ L +D+ID L+ + YL++K+ R R++
Sbjct: 355 KTVEESQSSKTEKDSNVNSKNINLFFTDLEMADCKDIIDDLSNRYWSSYLDNKATRNRIL 414
Query: 478 RALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIR 537
+ F + LP YSR +AT S M ++ S I L+ F ++ +++N+ +
Sbjct: 415 K--FFMETQDWSKLPVYSRFIATNSKYMPEIVSEFINYLDNGFRSQLHS-NKINV----K 467
Query: 538 NIRFIGELCKFKIAPAGLVFSCLKACLDDF-THHNIDVACNLLETCGRFLYRSPETSIRM 596
NI F E+ KF++ P+ ++F ++ + + +N+++ LLE G+FL PE M
Sbjct: 468 NIIFFSEMIKFQLIPSFMIFHKIRTLIMNMQVPNNVEILTVLLEHSGKFLLNKPEYKELM 527
Query: 597 ANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPE-RSARVS-KVRPPLHQYIRKLLFSD 654
M++++ KN + L+ +EN L PP +S V+ K P Q+ R L+ S+
Sbjct: 528 EKMVQLIKDKKNDRQLNMNMKGALENIITLLYPPSVKSLNVTVKTITPEQQFYRILIRSE 587
Query: 655 LDKSSIEHVLRQLRKLPWSDC--ESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFA 712
L +H+++ +RK W D + L F K HK Y I L+ + GL Y +F
Sbjct: 588 LSSLDFKHIVKLVRKAHWDDVAIQKVLFSLFSKPHKISYQNIPLLTKVLGGLYSYRRDFV 647
Query: 713 VAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
+ +D+VLE I GLE+NDYG R++++R+L E++N+E + S V+ DT+Y I+ FGH
Sbjct: 648 IRCIDQVLENIERGLEINDYGQNMHRISNVRYLTEIFNFEMIKSDVLLDTIYHIIRFGH 706
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 132/318 (41%), Gaps = 37/318 (11%)
Query: 37 KYIANIYIYTYTLLLGLWLT---LVYFLKICSLLHQRYKD-FSPCLIDGLLKVFFPGKSG 92
KY++ I + LL + ++ ++I S LHQR+ F+ L+ L+ F
Sbjct: 67 KYLSEIIVTVTECLLNVLNKNDDVIAAVEIISGLHQRFNGRFTSPLLGAFLQAF--ENPS 124
Query: 93 EDLDADRN--LKAMKKRSTLKLLLELYFIGIIEDSSIFINIIKDLTSIEHLKDRDTTQTN 150
D++++R+ + + + L++ ELY +G+ ++ I+ +I + + T + +
Sbjct: 125 VDIESERDELQRITRVKGNLRVFTELYLVGVFRT----LDDIESKDAIPNFLQKKTGRKD 180
Query: 151 LTLLASFARQ---GRIFLGL-------------PLSGPGQEIYEEFFKGLNITADQKKIF 194
LL S R+ + LG PL +++ + + +F
Sbjct: 181 -PLLFSILREILNYKFKLGFTTTIATAFIKKFAPLFRDDDNSWDDLIYDSKLKGALQSLF 239
Query: 195 KKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYRN 254
K + EL H + +++ E+ K G+L +E Y+KL + +
Sbjct: 240 KNFIDATFARATEL----HKKVNKLQREHQKCQIRTGKLRDEYVEEYDKLLPIFIRFKTS 295
Query: 255 VSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASGKDSSVP-EPVWDDEETRAFYECLPD 313
+L E ++ +PE + E ASP P + +W++E+TR FYE LPD
Sbjct: 296 AITLGEFFKLE---IPELEGASNDDLKETASPMITNQILPPNQRLWENEDTRKFYEILPD 352
Query: 314 LRAFVPAVLLGEAEHKAN 331
+ V + E +N
Sbjct: 353 ISKTVEESQSSKTEKDSN 370
>gi|190405859|gb|EDV09126.1| nonsense-mediated mRNA decay protein 2 [Saccharomyces cerevisiae
RM11-1a]
Length = 1088
Score = 182 bits (461), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 111/359 (30%), Positives = 189/359 (52%), Gaps = 14/359 (3%)
Query: 420 KDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEF--CYLNSKSNRKRLV 477
K E ++ EK V N++ L +D+ID L+ + YL++K+ R R++
Sbjct: 355 KTVEESQSSKTEKDSNVNSKNINLFFTDLEMADCKDIIDDLSNRYWSSYLDNKATRNRIL 414
Query: 478 RALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIR 537
+ F + LP YSR +AT S M ++ S I L+ F ++ +++N+ +
Sbjct: 415 K--FFMETQDWSKLPVYSRFIATNSKYMPEIVSEFINYLDNGFRSQLHS-NKINV----K 467
Query: 538 NIRFIGELCKFKIAPAGLVFSCLKACLDDF-THHNIDVACNLLETCGRFLYRSPETSIRM 596
NI F E+ KF++ P+ ++F ++ + + +N+++ LLE G+FL PE M
Sbjct: 468 NIIFFSEMIKFQLIPSFMIFHKIRTLIMNMQVPNNVEILTVLLEHSGKFLLNKPEYKELM 527
Query: 597 ANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPE-RSARVS-KVRPPLHQYIRKLLFSD 654
M++++ KN + L+ +EN L PP +S V+ K P Q+ R L+ S+
Sbjct: 528 EKMVQLIKDKKNDRQLNMNMKGALENIITLLYPPSVKSLNVTVKTITPEQQFYRILIRSE 587
Query: 655 LDKSSIEHVLRQLRKLPWSDC--ESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFA 712
L +H+++ +RK W D + L F K HK Y I L+ + GL Y +F
Sbjct: 588 LSSLDFKHIVKLVRKAHWDDVAIQKVLFSLFSKPHKISYQNIPLLTKVLGGLYSYRRDFV 647
Query: 713 VAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
+ +D+VLE I GLE+NDYG R++++R+L E++N+E + S V+ DT+Y I+ FGH
Sbjct: 648 IRCIDQVLENIERGLEINDYGQNMHRISNVRYLTEIFNFEMIKSDVLLDTIYHIIRFGH 706
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 132/318 (41%), Gaps = 37/318 (11%)
Query: 37 KYIANIYIYTYTLLLGLWLT---LVYFLKICSLLHQRYKD-FSPCLIDGLLKVFFPGKSG 92
KY++ I + LL + ++ ++I S LHQR+ F+ L+ L+ F
Sbjct: 67 KYLSEIIVTVTECLLNVLNKNDDVIAAVEIISGLHQRFNGRFTSPLLGAFLQAF--ENPS 124
Query: 93 EDLDADRN--LKAMKKRSTLKLLLELYFIGIIEDSSIFINIIKDLTSIEHLKDRDTTQTN 150
D++++R+ + + + L++ ELY +G+ ++ I+ +I + + T + +
Sbjct: 125 VDIESERDELQRITRVKGNLRVFTELYLVGVFRT----LDDIESKDAIPNFLQKKTGRKD 180
Query: 151 LTLLASFARQ---GRIFLGL-------------PLSGPGQEIYEEFFKGLNITADQKKIF 194
LL S R+ + LG PL +++ + + +F
Sbjct: 181 -PLLFSILREILNYKFKLGFTTTIATAFIKKFAPLFRDDDNSWDDLIYDSKLKGALQSLF 239
Query: 195 KKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYRN 254
K + EL H + +++ E+ K G+L +E Y+KL + +
Sbjct: 240 KNFIDATFARATEL----HKKVNKLQREHQKCQIRTGKLRDEYVEEYDKLLPIFIRFKTS 295
Query: 255 VSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASGKDSSVP-EPVWDDEETRAFYECLPD 313
+L E ++ +PE + E ASP P + +W++E+TR FYE LPD
Sbjct: 296 AITLGEFFKLE---IPELEGASNDDLKETASPMITNQILPPNQRLWENEDTRKFYEILPD 352
Query: 314 LRAFVPAVLLGEAEHKAN 331
+ V + E +N
Sbjct: 353 ISKTVEESQSSKTEKDSN 370
>gi|207344671|gb|EDZ71736.1| YHR077Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 689
Score = 181 bits (459), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 110/359 (30%), Positives = 186/359 (51%), Gaps = 14/359 (3%)
Query: 420 KDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEF--CYLNSKSNRKRLV 477
K E ++ EK V N++ L +D+ID L+ + YL++K+ R R++
Sbjct: 31 KTVEESQSSKTEKDSNVNSKNINLFFTDLEMADCKDIIDDLSNRYWSSYLDNKATRNRIL 90
Query: 478 RALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIR 537
+ F + LP YSR +AT S M ++ S I L+ F ++ + ++
Sbjct: 91 K--FFMETQDWSKLPVYSRFIATNSKYMPEIVSEFINYLDNGFRSQLHSN-----KINVK 143
Query: 538 NIRFIGELCKFKIAPAGLVFSCLKACLDDF-THHNIDVACNLLETCGRFLYRSPETSIRM 596
NI F E+ KF++ P+ ++F ++ + + +N+++ LLE G+FL PE M
Sbjct: 144 NIIFFSEMIKFQLIPSFMIFHKIRTLIMNMQVPNNVEILTVLLEHSGKFLLNKPEYKELM 203
Query: 597 ANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPE-RSARVS-KVRPPLHQYIRKLLFSD 654
M++++ KN + L+ +EN L PP +S V+ K P Q+ R L+ S+
Sbjct: 204 EKMVQLIKDKKNDRQLNMNMKGALENIITLLYPPSVKSLNVTVKTITPEQQFYRILIRSE 263
Query: 655 LDKSSIEHVLRQLRKLPWSDC--ESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFA 712
L +H+++ +RK W D + L F K HK Y I L+ + GL Y +F
Sbjct: 264 LSSLDFKHIVKLVRKAHWDDVAIQKVLFSLFSKPHKISYQNIPLLTKVLGGLYSYRRDFV 323
Query: 713 VAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
+ +D+VLE I GLE+NDYG R++++R+L E++N+E + S V+ DT+Y I+ FGH
Sbjct: 324 IRCIDQVLENIERGLEINDYGQNMHRISNVRYLTEIFNFEMIKSDVLLDTIYHIIRFGH 382
>gi|500836|gb|AAB68893.1| Nmd2p: Protein involved in decay of mRNA containing nonsense codons
[Saccharomyces cerevisiae]
gi|967213|gb|AAA74948.1| Ifs1p [Saccharomyces cerevisiae]
gi|392298882|gb|EIW09977.1| Nmd2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1091
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 111/359 (30%), Positives = 189/359 (52%), Gaps = 14/359 (3%)
Query: 420 KDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEF--CYLNSKSNRKRLV 477
K E ++ EK V N++ L +D+ID L+ + YL++K+ R R++
Sbjct: 357 KTVEESQSSKTEKDSNVNSKNINLFFTDLEMADCKDIIDDLSNRYWSSYLDNKATRNRIL 416
Query: 478 RALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIR 537
+ F + LP YSR +AT S M ++ S I L+ F ++ +++N+ +
Sbjct: 417 K--FFMETQDWSKLPVYSRFIATNSKYMPEIVSEFINYLDNGFRSQLHS-NKINV----K 469
Query: 538 NIRFIGELCKFKIAPAGLVFSCLKACLDDF-THHNIDVACNLLETCGRFLYRSPETSIRM 596
NI F E+ KF++ P+ ++F ++ + +N+++ LLE G+FL PE M
Sbjct: 470 NIIFFSEMIKFQLIPSFMIFHKIRTLIMYMQVPNNVEILTVLLEHSGKFLLNKPEYKELM 529
Query: 597 ANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPE-RSARVS-KVRPPLHQYIRKLLFSD 654
M++++ KN + L+ + +EN L PP +S V+ K P Q+ R L+ S+
Sbjct: 530 EKMVQLIKDKKNDRQLNMNMKSALENIITLLYPPSVKSLNVTVKTITPEQQFYRILIRSE 589
Query: 655 LDKSSIEHVLRQLRKLPWSDC--ESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFA 712
L +H+++ +RK W D + L F K HK Y I L+ + GL Y +F
Sbjct: 590 LSSLDFKHIVKLVRKAHWDDVAIQKVLFSLFSKPHKISYQNIPLLTKVLGGLYSYRRDFV 649
Query: 713 VAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
+ +D+VLE I GLE+NDYG R++++R+L E++N+E + S V+ DT+Y I+ FGH
Sbjct: 650 IRCIDQVLENIERGLEINDYGQNMHRISNVRYLTEIFNFEMIKSDVLLDTIYHIIRFGH 708
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 132/318 (41%), Gaps = 37/318 (11%)
Query: 37 KYIANIYIYTYTLLLGLWLT---LVYFLKICSLLHQRYKD-FSPCLIDGLLKVFFPGKSG 92
KY++ I + LL + ++ ++I S LHQR+ F+ L+ L+ F
Sbjct: 69 KYLSEIIVTVTECLLNVLNKNDDVIAAVEIISGLHQRFNGRFTSPLLGAFLQAF--ENPS 126
Query: 93 EDLDADRN--LKAMKKRSTLKLLLELYFIGIIEDSSIFINIIKDLTSIEHLKDRDTTQTN 150
D++++R+ + + + L++ ELY +G+ ++ I+ +I + + T + +
Sbjct: 127 VDIESERDELQRITRVKGNLRVFTELYLVGVFRT----LDDIESKDAIPNFLQKKTGRKD 182
Query: 151 LTLLASFARQ---GRIFLGL-------------PLSGPGQEIYEEFFKGLNITADQKKIF 194
LL S R+ + LG PL +++ + + +F
Sbjct: 183 -PLLFSILREILNYKFKLGFTTTIATAFIKKFAPLFRDDDNSWDDLIYDSKLKGALQSLF 241
Query: 195 KKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYRN 254
K + EL H + +++ E+ K G+L +E Y+KL + +
Sbjct: 242 KNFIDATFARATEL----HKKVNKLQREHQKCQIRTGKLRDEYVEEYDKLLPIFIRFKTS 297
Query: 255 VSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASGKDSSVP-EPVWDDEETRAFYECLPD 313
+L E ++ +PE + E ASP P + +W++E+TR FYE LPD
Sbjct: 298 AITLGEFFKLE---IPELEGASNDDLKETASPMITNQILPPNQRLWENEDTRKFYEILPD 354
Query: 314 LRAFVPAVLLGEAEHKAN 331
+ V + E +N
Sbjct: 355 ISKTVEESQSSKTEKDSN 372
>gi|118401738|ref|XP_001033189.1| MIF4G domain containing protein [Tetrahymena thermophila]
gi|89287536|gb|EAR85526.1| MIF4G domain containing protein [Tetrahymena thermophila SB210]
Length = 995
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 110/341 (32%), Positives = 186/341 (54%), Gaps = 8/341 (2%)
Query: 448 LPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKD 507
L CVS++ D L +F Y+N+K NRK+LV+ + + ++P+ R VA +S KD
Sbjct: 407 LKHCVSQEKADLLAEQFVYVNNKQNRKKLVKDILEYRKEYNLMVPHLCRFVAVISKHFKD 466
Query: 508 VSSMLIQMLEEEFNFLINKKDQ--MNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLD 565
+ M+++ L ++F+ K+ Q + K+R ++++ EL KF++ + + K+ +D
Sbjct: 467 LGDMVVEKLIKDFDSYREKQRQDFSFRDKKMRYLKYLCELAKFRVLELFKILNIFKSLVD 526
Query: 566 DFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYY 625
DF +D+ C +++ GRF+Y + ET R +L+ L NL +EN+
Sbjct: 527 DFNTQQVDLLCVIMDNVGRFIYNNQETRFRYITILDQLNVHLRKANLPTNKSIQLENSIS 586
Query: 626 LCKPPERSA-RVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSD-CESYLLKCF 683
L KP ++ A + K R L QYIR L+ L++ S V ++KL W + + Y
Sbjct: 587 LSKPSKKKAIKSEKQRTELEQYIRFLVLEKLNEMSFREVTATIQKLKWDEQLDDYCFNAI 646
Query: 684 MK-VHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHM 742
+K KG+ I L A L + L+ + + +VD++LE+ G+E N+ QQ+R++ +
Sbjct: 647 IKRALKGRIDDIQLCAGLLSFLNTFRPTLTLRIVDDLLEKTIYGMEQNEVQEQQKRISVV 706
Query: 743 RFLGELYNYEHVDSSVIFDTLYLILVFGHGTAETYWTHQKI 783
RFLGELY Y+ V+ IFD LYL + FGH E + T ++I
Sbjct: 707 RFLGELYLYQVVEIDFIFDLLYLCIDFGH---EPFRTQEEI 744
Score = 43.1 bits (100), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 111/249 (44%), Gaps = 17/249 (6%)
Query: 96 DADRNLKAMKKRSTLKLLLELYFIGIIEDSSIFINIIKDLTSIEHLKDRD---TTQTNLT 152
+ D + A+K+R ++ + EL+ +G+ + +KD+ I H + R QT L
Sbjct: 107 EKDEKVVAVKRRDMMRFIAELFVVGVTSQYDKMMECLKDI--INHKEARPLMLNVQTALM 164
Query: 153 LLASFARQGRIFLGLPLSGPGQEIYEEFFKGLN----ITADQKKIFKKAFHTYYNAVQEL 208
F + G+ +S + Y++ + +T ++ + F Y N + +
Sbjct: 165 FSDRFGFEITRRKGIKISFNYNK-YDDLVNIFDFDQIVTPEKIQKIVMYFQYYLNILMDH 223
Query: 209 LQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPV 268
L+ + L+ ++E L ++ +L+E++ Y + R +Y +LY +S++A+ L++ V
Sbjct: 224 LKNLY-DLKIQQDEKLNKLISEEKLTEKDEQEYTRTRNNYINLYEALSTIADNLELDFKV 282
Query: 269 M--PEDVHTTRVTSGEDA----SPASGKDSSVPEPVWDDEETRAFYECLPDLRAFVPAVL 322
E+ + E+ + E ++D +E RAFYE + DL+ +P L
Sbjct: 283 NFGEEEREKKQQKILEEQRRKKLEEEERLRQESENLFDTDEERAFYEDIFDLKVKLPGSL 342
Query: 323 LGEAEHKAN 331
+ N
Sbjct: 343 FSNNYFQGN 351
>gi|6579193|ref|NP_011944.2| Nmd2p [Saccharomyces cerevisiae S288c]
gi|1171737|sp|P38798.2|NMD2_YEAST RecName: Full=Nonsense-mediated mRNA decay protein 2; AltName:
Full=Up-frameshift suppressor 2
gi|555939|gb|AAA67724.1| Nmd2p [Saccharomyces cerevisiae]
gi|806704|gb|AAA66521.1| Upf2p [Saccharomyces cerevisiae]
gi|285809984|tpg|DAA06771.1| TPA: Nmd2p [Saccharomyces cerevisiae S288c]
Length = 1089
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 111/359 (30%), Positives = 189/359 (52%), Gaps = 14/359 (3%)
Query: 420 KDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEF--CYLNSKSNRKRLV 477
K E ++ EK V N++ L +D+ID L+ + YL++K+ R R++
Sbjct: 355 KTVEESQSSKTEKDSNVNSKNINLFFTDLEMADCKDIIDDLSNRYWSSYLDNKATRNRIL 414
Query: 478 RALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIR 537
+ F + LP YSR +AT S M ++ S I L+ F ++ +++N+ +
Sbjct: 415 K--FFMETQDWSKLPVYSRFIATNSKYMPEIVSEFINYLDNGFRSQLHS-NKINV----K 467
Query: 538 NIRFIGELCKFKIAPAGLVFSCLKACLDDF-THHNIDVACNLLETCGRFLYRSPETSIRM 596
NI F E+ KF++ P+ ++F ++ + +N+++ LLE G+FL PE M
Sbjct: 468 NIIFFSEMIKFQLIPSFMIFHKIRTLIMYMQVPNNVEILTVLLEHSGKFLLNKPEYKELM 527
Query: 597 ANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPE-RSARVS-KVRPPLHQYIRKLLFSD 654
M++++ KN + L+ + +EN L PP +S V+ K P Q+ R L+ S+
Sbjct: 528 EKMVQLIKDKKNDRQLNMNMKSALENIITLLYPPSVKSLNVTVKTITPEQQFYRILIRSE 587
Query: 655 LDKSSIEHVLRQLRKLPWSDC--ESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFA 712
L +H+++ +RK W D + L F K HK Y I L+ + GL Y +F
Sbjct: 588 LSSLDFKHIVKLVRKAHWDDVAIQKVLFSLFSKPHKISYQNIPLLTKVLGGLYSYRRDFV 647
Query: 713 VAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
+ +D+VLE I GLE+NDYG R++++R+L E++N+E + S V+ DT+Y I+ FGH
Sbjct: 648 IRCIDQVLENIERGLEINDYGQNMHRISNVRYLTEIFNFEMIKSDVLLDTIYHIIRFGH 706
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 132/318 (41%), Gaps = 37/318 (11%)
Query: 37 KYIANIYIYTYTLLLGLWLT---LVYFLKICSLLHQRYKD-FSPCLIDGLLKVFFPGKSG 92
KY++ I + LL + ++ ++I S LHQR+ F+ L+ L+ F
Sbjct: 67 KYLSEIIVTVTECLLNVLNKNDDVIAAVEIISGLHQRFNGRFTSPLLGAFLQAF--ENPS 124
Query: 93 EDLDADRN--LKAMKKRSTLKLLLELYFIGIIEDSSIFINIIKDLTSIEHLKDRDTTQTN 150
D++++R+ + + + L++ ELY +G+ ++ I+ +I + + T + +
Sbjct: 125 VDIESERDELQRITRVKGNLRVFTELYLVGVFRT----LDDIESKDAIPNFLQKKTGRKD 180
Query: 151 LTLLASFARQ---GRIFLGL-------------PLSGPGQEIYEEFFKGLNITADQKKIF 194
LL S R+ + LG PL +++ + + +F
Sbjct: 181 -PLLFSILREILNYKFKLGFTTTIATAFIKKFAPLFRDDDNSWDDLIYDSKLKGALQSLF 239
Query: 195 KKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYRN 254
K + EL H + +++ E+ K G+L +E Y+KL + +
Sbjct: 240 KNFIDATFARATEL----HKKVNKLQREHQKCQIRTGKLRDEYVEEYDKLLPIFIRFKTS 295
Query: 255 VSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASGKDSSVP-EPVWDDEETRAFYECLPD 313
+L E ++ +PE + E ASP P + +W++E+TR FYE LPD
Sbjct: 296 AITLGEFFKLE---IPELEGASNDDLKETASPMITNQILPPNQRLWENEDTRKFYEILPD 352
Query: 314 LRAFVPAVLLGEAEHKAN 331
+ V + E +N
Sbjct: 353 ISKTVEESQSSKTEKDSN 370
>gi|259146830|emb|CAY80086.1| Nmd2p [Saccharomyces cerevisiae EC1118]
Length = 1087
Score = 179 bits (453), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 111/359 (30%), Positives = 187/359 (52%), Gaps = 14/359 (3%)
Query: 420 KDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEF--CYLNSKSNRKRLV 477
K E ++ EK V N++ L +D+ID L+ + YL++KS R R++
Sbjct: 355 KTVEESQSSKTEKDSNVNSKNINLFFTDLEMADCKDIIDDLSNRYWSSYLDNKSTRNRIL 414
Query: 478 RALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIR 537
+ F + LP YSR +A S M ++ S I L+ F ++ +++N+ +
Sbjct: 415 K--FFMETQDWSKLPVYSRFIAINSKYMPEIVSEFINYLDNGFRSQLHS-NKINV----K 467
Query: 538 NIRFIGELCKFKIAPAGLVFSCLKACLDDF-THHNIDVACNLLETCGRFLYRSPETSIRM 596
NI F E+ KF++ P+ ++F ++ + +N+++ LLE G+FL PE M
Sbjct: 468 NIIFFSEMIKFQLIPSFMIFHKIRTLIMYMQVPNNVEILTVLLEHSGKFLLNKPEYKELM 527
Query: 597 ANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPE-RSARVS-KVRPPLHQYIRKLLFSD 654
M++++ KN + L+ +EN L PP +S V+ K P Q+ R L+ S+
Sbjct: 528 EKMVQLIKDKKNDRQLNMNMKGALENIITLLYPPSVKSLNVTVKTITPEQQFYRILIRSE 587
Query: 655 LDKSSIEHVLRQLRKLPWSDC--ESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFA 712
L +H+++ +RK W D + L F K HK Y I L+ + GL Y +F
Sbjct: 588 LSSLDFKHIVKLVRKAHWDDVAIQKVLFSLFSKPHKISYQNIPLLTKVLGGLYSYRRDFV 647
Query: 713 VAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
+ +D+VLE I GLE+NDYG R++++R+L E++N+E + S V+ DT+Y I+ FGH
Sbjct: 648 IRCIDQVLENIERGLEINDYGQNMHRISNVRYLTEIFNFEMIKSDVLLDTIYHIIRFGH 706
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 132/318 (41%), Gaps = 37/318 (11%)
Query: 37 KYIANIYIYTYTLLLGLWLT---LVYFLKICSLLHQRYKD-FSPCLIDGLLKVFFPGKSG 92
KY++ I + LL + ++ ++I S LHQR+ F+ L+ L+ F
Sbjct: 67 KYLSEIIVTVTECLLNVLNKNDDVIAAVEIISGLHQRFNGRFTSPLLGAFLQAF--ENPS 124
Query: 93 EDLDADRN--LKAMKKRSTLKLLLELYFIGIIEDSSIFINIIKDLTSIEHLKDRDTTQTN 150
D++++R+ + + + L++ ELY +G+ ++ I+ +I + + T + +
Sbjct: 125 VDIESERDELQRITRVKGNLRVFTELYLVGVFRT----LDDIESKDAIPNFLQKKTGRKD 180
Query: 151 LTLLASFARQ---GRIFLGL-------------PLSGPGQEIYEEFFKGLNITADQKKIF 194
LL S R+ + LG PL +++ + + +F
Sbjct: 181 -PLLFSILREILNYKFKLGFTTTIATAFIKKFAPLFRDDDNSWDDLIYDSKLKGALQSLF 239
Query: 195 KKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYRN 254
K + EL H + +++ E+ K G+L +E Y+KL + +
Sbjct: 240 KNFIDATFARATEL----HKKVNKLQREHQKCQIRTGKLRDEYVEEYDKLLPIFIRFKTS 295
Query: 255 VSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASGKDSSVP-EPVWDDEETRAFYECLPD 313
+L E ++ +PE + E ASP P + +W++E+TR FYE LPD
Sbjct: 296 AITLGEFFKLE---IPELEGASNDDLKETASPMITNQILPPNQRLWENEDTRKFYEILPD 352
Query: 314 LRAFVPAVLLGEAEHKAN 331
+ V + E +N
Sbjct: 353 ISKTVEESQSSKTEKDSN 370
>gi|50553905|ref|XP_504361.1| YALI0E24629p [Yarrowia lipolytica]
gi|49650230|emb|CAG79960.1| YALI0E24629p [Yarrowia lipolytica CLIB122]
Length = 1057
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 181/746 (24%), Positives = 314/746 (42%), Gaps = 88/746 (11%)
Query: 61 LKICSLLHQRY-KDFSPCLIDGLLKVFFPGKSG---EDLDADRNLKAMKKRSTLKLLLEL 116
+++ S++HQR+ F+P L VFF G ED A R A ++ +L ++L
Sbjct: 95 VQVTSIMHQRFFHQFTP----QFLTVFFQGLESTLTED-RAKRTELAPIRKILCRLCVDL 149
Query: 117 YFIGIIEDSSIFINIIK---------------DLTSIEH-----LKDRDTTQTNLTLLAS 156
+ +GII NI L H LKD D L+L
Sbjct: 150 WLVGIITPEYFNKNIPSWIEGTPQAISQAGPPPLVIFRHILGTDLKDFDYADLVLSLAKH 209
Query: 157 FARQGRIFLGLPLSGPGQEIYEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSL 216
F FL + G +E E L +T K+ K +Y +Q+ ++ L
Sbjct: 210 FP-----FL---VGGADEEGQAE---ALGVTEAVPKM-AKLVKSYCLHMQKRVKMMAILL 257
Query: 217 RQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTT 276
+ + K G ++ S +L + + L+EAL ++ + D +
Sbjct: 258 GRQRRKFEKHYIQVGRMTTGREDSLNELETQLSTMVSTCTQLSEALGIEMQSLT-DCYKE 316
Query: 277 RVTSGEDASPASGKDSSVPEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVK 336
T DAS +P+WD E+ FY +PDL A++ S +
Sbjct: 317 EDTITLDASFDG-------QPLWDSEDDMLFYTEVPDL---------------ADKVSEQ 354
Query: 337 PLEQPTDPASEPDQGQLAAQDTAEVSADL---GASPEGKSVEKGKDKEEKEKEKAKDPDK 393
L D A + + + ++ A +L E + + K + ++ AK P
Sbjct: 355 VLSGGVDVA-DAELNDMVEKNKAARQKELLQQAVEKEREKIRANAQKARESRQAAKAPQG 413
Query: 394 EKGKGKDKEEKDKEKAKDPDKEKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVS 453
+K D E D ++E+ KD K G + L+RL S
Sbjct: 414 KKKSTTDGGESDDSDYVSEEEEEEPVKDMSPK------------GIQMTEFLERLSQARS 461
Query: 454 RDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLI 513
++ ID +T+EFC+LN+K++ RL+R +LP+Y+RMVATL + + +I
Sbjct: 462 KEEIDAMTIEFCHLNNKASLNRLLRHFREFSLHKAFMLPFYARMVATLGPYFPKLRASVI 521
Query: 514 QMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNID 573
+ L + ++E ++ + +F+ EL KF + P +F L + N++
Sbjct: 522 ERLFARLRSYTRGNSRRSMERRLASFQFLSELTKFGLVPKHYIFHLLNFMGSRLNYMNLE 581
Query: 574 VACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERS 633
+ CG+FL+R+ T M ++E +M+ + L + +VE L K +
Sbjct: 582 SLSKIFHCCGQFLWRNASTHQDMEELMESMMQRRTKGYLSISEILMVEELLSLVKFRGGA 641
Query: 634 ARVSKVR-----PPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE---SYLLKCFMK 685
+ R P+ ++ +L + +L E V + KL WSD E L + F +
Sbjct: 642 GETTNKRHVVSSTPIQVFLDRLYYIELSTEVAEQVAQLTLKLDWSDEEITCPTLFRIFTE 701
Query: 686 VHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFL 745
+ +G + +A++ + ++ H FA V++ VLE IR LELN Y + Q RL+ + F+
Sbjct: 702 TWRVSHGNMAAVAAVLSRIAPSHPVFAQKVIETVLENIRQCLELNSYSLNQIRLSQVEFV 761
Query: 746 GELYNYEHVDSSVIFDTLYLILVFGH 771
ELYN ++ + I D L++I+ + H
Sbjct: 762 SELYNQGLLNHTCILDMLFMIICYDH 787
>gi|365765190|gb|EHN06702.1| Nmd2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 763
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 109/359 (30%), Positives = 184/359 (51%), Gaps = 14/359 (3%)
Query: 420 KDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEF--CYLNSKSNRKRLV 477
K E ++ EK V N++ L +D+ID L+ + YL++K+ R R++
Sbjct: 31 KTVEESQSSKTEKDSNVNSKNINLFFTDLEMADCKDIIDDLSNRYWSSYLDNKATRNRIL 90
Query: 478 RALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIR 537
+ F + LP YSR +A S M ++ S I L+ F ++ + ++
Sbjct: 91 K--FFMXTQDWSKLPVYSRFIAINSKYMPEIVSEFINYLDNGFRSQLHSN-----KINVK 143
Query: 538 NIRFIGELCKFKIAPAGLVFSCLKACLDDF-THHNIDVACNLLETCGRFLYRSPETSIRM 596
NI F E+ KF++ P+ ++F ++ + +N+++ LLE G+FL PE M
Sbjct: 144 NIIFFSEMIKFQLIPSFMIFHKIRTLIMYMQVPNNVEILTVLLEHSGKFLLNKPEYKELM 203
Query: 597 ANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPE-RSARVS-KVRPPLHQYIRKLLFSD 654
M++++ KN + L+ +EN L PP +S V+ K P Q+ R L+ S+
Sbjct: 204 EKMVQLIKDKKNDRQLNMNMKGALENIITLLYPPSVKSLNVTVKTITPEQQFYRILIRSE 263
Query: 655 LDKSSIEHVLRQLRKLPWSDC--ESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFA 712
L +H+++ +RK W D + L F K HK Y I L+ + GL Y +F
Sbjct: 264 LSSLDFKHIVKLVRKAHWDDVAIQKVLFSLFSKPHKISYQNIPLLTKVLGGLYSYRRDFV 323
Query: 713 VAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
+ +D+VLE I GLE+NDYG R++++R+L E++N+E + S V+ DT+Y I+ FGH
Sbjct: 324 IRCIDQVLENIERGLEINDYGQNMHRISNVRYLTEIFNFEMIKSDVLLDTIYHIIRFGH 382
>gi|308477585|ref|XP_003101006.1| hypothetical protein CRE_16832 [Caenorhabditis remanei]
gi|308264350|gb|EFP08303.1| hypothetical protein CRE_16832 [Caenorhabditis remanei]
Length = 852
Score = 175 bits (444), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 176/741 (23%), Positives = 335/741 (45%), Gaps = 95/741 (12%)
Query: 62 KICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIGI 121
++C + +Y +FS + G K P K +D+ K R + L EL G+
Sbjct: 94 ELCLAVSAKYPNFSEQMA-GEFKKVLPVKK-----SDKITNVAKLRVDIIFLAELCLCGV 147
Query: 122 IEDSSIFINIIKDLTSIEHLKDRDTTQ-TNLTLLASFAR----QGRIFLGLPLSGPGQEI 176
+ + ++ + S +L D + N LLA+ +R Q + +P+ + I
Sbjct: 148 FNERE-GLQVLGAVLS--YLIQTDKVEFVNYGLLATVSRAVGYQVANIVPIPMGDDAETI 204
Query: 177 Y---EEFFKGLNITADQKKIFKKAFHTYYNAV----QELLQAEHTSLRQMENENAKILNA 229
+E ++ DQKK ++ F +YY ++ +++ A + ++++++ + +
Sbjct: 205 SVKEDELPTSSALSNDQKKTIRELFKSYYESLYSKTEKVCSARNKAMKRVKRQE----RS 260
Query: 230 KGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPV----MPEDVHTTRVTSGEDAS 285
+G+ ++E + + +L+ D L R + +L++A+++ V P + E A+
Sbjct: 261 RGDAADEEKTKFNELQAELDTL-RKMVNLSKAVELGCAVGIEMKPLKEEASDDEEDEAAN 319
Query: 286 PASGKD-SSVPEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDP 344
G+ + +W+DEET+AFYE L DLR V P D
Sbjct: 320 LEMGRRLAEGAIKLWNDEETKAFYEDLIDLRQMV----------------------PKDL 357
Query: 345 ASEPDQGQLAAQDTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEK 404
+ +Q L+ AE D+ E G ++ D +KE +
Sbjct: 358 YKDSEQRTLSKAKMAERIEDIDVENIN---EAGAVDAKRTSMPRMDSEKETTPEDTHLQM 414
Query: 405 DKEKAKDPDKEKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEF 464
++A D +E+G K + L VS+ D+ F
Sbjct: 415 LLKEAVDSSEERGVNK--------------------WQKFVLDLDHLVSKYSTDKAAEYF 454
Query: 465 CY-LNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFL 523
LN+K RKRLV+ + + P T ++++P+Y+R++ATL M D+++ ++ L E+F
Sbjct: 455 VSNLNNKGCRKRLVKLMIDPPPTRIDVVPFYARLIATLENVMPDLTTEIVTHLLEKFRGF 514
Query: 524 INKKDQ-----MNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNL 578
+ +K + +E+K+ + I EL KF + SCL+ + D H++++
Sbjct: 515 LQQKQSSAAVAIKVESKMVCVMMIAELMKFGVVSRAEGLSCLRQLVYDLRGHSVEMTATF 574
Query: 579 LETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSA---- 634
+E+ G +LYR E+ +M +LE++ + K + D R L++NAY+ C PPE S
Sbjct: 575 MESGGLYLYRHTESHAKMKRLLEVV-KAKRDRMKDQRQAMLIDNAYFTCLPPEDSKEERL 633
Query: 635 --RVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGK 690
++ + P+ ++IR ++ D+++S+++ L+ +R+L WSD E Y ++
Sbjct: 634 RLKLDEEDTPMKRFIRHIVL-DINESNVDIFLKCIRRLDWSDPEISDYAIRYLSSTWLLP 692
Query: 691 YGQIHLIASLTAGLSR--YHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGEL 748
+ +AS AGL + +AV+D +E IR+ LE N Q + +L EL
Sbjct: 693 IENLQHVASAIAGLCNLPHLQWIGMAVIDSTIETIRISLE-NPGIFNQWAHSAAVYLAEL 751
Query: 749 YNYEHVDSSVIFDTLYLILVF 769
Y++E D +I LY ++ +
Sbjct: 752 YSFELCDEDLILKILYQLISY 772
>gi|164655393|ref|XP_001728826.1| hypothetical protein MGL_3993 [Malassezia globosa CBS 7966]
gi|159102712|gb|EDP41612.1| hypothetical protein MGL_3993 [Malassezia globosa CBS 7966]
Length = 1178
Score = 173 bits (438), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 130/430 (30%), Positives = 205/430 (47%), Gaps = 26/430 (6%)
Query: 353 LAAQDTAEVSADLGASPEGKS-VEKGKDKEEKEKEKAKDPDKEKGKGK------DKEEK- 404
L A D VS LG + E S + + K E+E K P +++ K D E+
Sbjct: 352 LPASDKGTVSQRLGINLEATSALAEMTAKIEQEYASGKSPWEDEETRKFYKDIFDLRERI 411
Query: 405 -----DKEKAKDPDKEKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQ 459
D+ D +KEK KE E E E + +L +L+RLP +R ++D
Sbjct: 412 PTALLDQAPQAD-EKEKEKEALNE---EAEMQTTMDNRSQSLQNILERLPTLANRTMVDD 467
Query: 460 LTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEE 519
+ VE + KRLV + P+ +LLPYY+RM+A L ++ M+++ + ++
Sbjct: 468 MAVELGFHLKSVTNKRLVSHFMSAPKHRWDLLPYYARMIAILHPYRAGLADMVVEQVNQK 527
Query: 520 F--NFLINKKD-QMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVAC 576
F + K D QM I +GEL KF + P +VF +K LDDF+ I++
Sbjct: 528 FRQQYSYRKPDRQMQSNVVI----CMGELTKFGLVPDHIVFHTMKVLLDDFSPVAIEMLA 583
Query: 577 NLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARV 636
L+ETCGR+LYR P T RM +ML+++ R + NL +H L++NAYY C PPER V
Sbjct: 584 LLIETCGRYLYRMPLTMTRMQSMLDLMRRKRMAHNLSEQHSLLLDNAYYKCVPPERPVIV 643
Query: 637 SKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSD--CESYLLKCFMKVHKGKYGQI 694
+ + Q+I L + + H+ L KL W D ++L F ++ +
Sbjct: 644 HREPTVMEQFITYLFTNLPSPNKTPHIRDLLLKLDWHDESIRAHLFMHFTSPWLVQHNNV 703
Query: 695 HLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHV 754
+A L L F V+D + E I L + QRR++ +R+LGEL+ V
Sbjct: 704 RNLAELLNALRPMRYAFTTQVLDSLSEGIEADLLHLHFTWHQRRISRVRYLGELHRVGIV 763
Query: 755 DSSVIFDTLY 764
+ + + ++
Sbjct: 764 SVNELLNQVW 773
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 118/304 (38%), Gaps = 44/304 (14%)
Query: 61 LKICSLLHQRY--KDFSPCLIDGLLKVFFP-------GKSGEDLDADRNLKAMKKRSTLK 111
++I S LH R+ +FS ++ + + P E + LK ++R+ L+
Sbjct: 122 VEILSALHARFGGAEFSCAMLKAISQELVPLPPRNNAEPPNEQAQKEEALKVTRQRNLLR 181
Query: 112 LLLELYFIGI---IEDSSIFINIIKDL--TSIEHLKDRDTTQTNLTLLASFARQGRIFLG 166
EL +G+ + + D + L +D L L+ R L
Sbjct: 182 GATELVLVGLGGPVTGNGCVCAAGWDWLYEQLRTLLGQDRDLAYLPLVQGMMRTFGSLLL 241
Query: 167 LPLSGPGQEIYEEFFKGLN--------ITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQ 218
+P+ E G + Q + F+K F YY A+ + ++ E+ L +
Sbjct: 242 IPMEEHEAGQSEAHLGGTAAAVSFDPVVPETQSQKFRKLFEMYYIALVKRVKREYERLNE 301
Query: 219 MENENAKILNAKGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTT-- 276
E N G + E+ +++E+ K + + +A +L++ P +P T
Sbjct: 302 QERRNNDAYIRSGMIFEDRQAAFERRSKELQTMIDAMQVMASSLNVFVPDLPASDKGTVS 361
Query: 277 --------------RVTSGEDASPASGKDSSVPEPVWDDEETRAFYECLPDLRAFVPAVL 322
+T+ + ASGK W+DEETR FY+ + DLR +P L
Sbjct: 362 QRLGINLEATSALAEMTAKIEQEYASGKSP------WEDEETRKFYKDIFDLRERIPTAL 415
Query: 323 LGEA 326
L +A
Sbjct: 416 LDQA 419
>gi|308477433|ref|XP_003100930.1| CRE-SMG-3 protein [Caenorhabditis remanei]
gi|308264274|gb|EFP08227.1| CRE-SMG-3 protein [Caenorhabditis remanei]
Length = 1148
Score = 172 bits (436), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 175/741 (23%), Positives = 335/741 (45%), Gaps = 95/741 (12%)
Query: 62 KICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIGI 121
++C + +Y +FS + G K P K +D+ K R + L EL G+
Sbjct: 104 ELCLAVSAKYPNFSEQMA-GEFKKVLPVKK-----SDKITNVAKLRVDIIFLAELCLCGV 157
Query: 122 IEDSSIFINIIKDLTSIEHLKDRDTTQ-TNLTLLASFAR----QGRIFLGLPLSGPGQEI 176
+ + ++ + S +L D + N LLA+ +R Q + +P+ + I
Sbjct: 158 FNERE-GLQVLGAVLS--YLIQTDKVEFVNYGLLATVSRAVGYQVANIVPIPMGDDAETI 214
Query: 177 Y---EEFFKGLNITADQKKIFKKAFHTYYNAV----QELLQAEHTSLRQMENENAKILNA 229
+E ++ DQKK ++ F +YY ++ +++ A + ++++++ + +
Sbjct: 215 SVKEDELPTSSALSNDQKKTIRELFKSYYESLYSKTEKVCSARNKAMKRVKRQE----RS 270
Query: 230 KGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPV----MPEDVHTTRVTSGEDAS 285
+G+ ++E + + +L+ D L R + +L++A+++ V P + E A+
Sbjct: 271 RGDAADEEKTKFNELQAELDTL-RKMVNLSKAVELGRAVGIEMKPLKEEASDDEEDEAAN 329
Query: 286 PASGKD-SSVPEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDP 344
G+ + +W+DEET+AFYE L DLR V P D
Sbjct: 330 LEMGRRLAEGAIKLWNDEETKAFYEDLIDLRQMV----------------------PKDL 367
Query: 345 ASEPDQGQLAAQDTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEK 404
+ +Q L+ AE D+ E G ++ D +KE +
Sbjct: 368 YKDSEQRTLSKAKMAERIEDIDVENIN---EAGAVDAKRTSMPRMDSEKETTPEDTHLQM 424
Query: 405 DKEKAKDPDKEKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEF 464
++A D +E+G K + L VS+ D+ F
Sbjct: 425 LLKEAADSSEERGVNK--------------------WQKFVLDLDHLVSKYSTDKAAEYF 464
Query: 465 CY-LNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFL 523
LN+K RKRLV+ + + P T ++++P+Y+R++ATL M D+++ ++ L E+F
Sbjct: 465 VSNLNNKGCRKRLVKLMIDPPPTRIDVVPFYARLIATLENVMPDLTTEIVTHLLEKFRGF 524
Query: 524 INKKDQ-----MNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNL 578
+ +K + +E+K+ + I EL KF + SCL+ + D H++++
Sbjct: 525 LQQKQSSAAVAIKVESKMVCVMMIAELMKFGVVSRAEGLSCLRQLVYDLRGHSVEMTATF 584
Query: 579 LETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSA---- 634
+E+ G +LYR E+ +M +LE++ + K + D R L++NAY+ C PPE S
Sbjct: 585 MESGGLYLYRHTESHAKMKRLLEVV-KAKRDRMKDQRQAMLIDNAYFTCLPPEDSKEERL 643
Query: 635 --RVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGK 690
++ + P+ ++IR ++ D+++S+++ L+ +R+L WS+ E Y ++
Sbjct: 644 RLKLDEEDTPMKRFIRHIVL-DINESNVDIFLKCIRRLDWSNPEISDYAIRYLSSTWLLP 702
Query: 691 YGQIHLIASLTAGLSR--YHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGEL 748
+ +AS AGL + +AV+D +E IR+ LE N Q + +L EL
Sbjct: 703 IENLQHVASAIAGLCNLPHLQWIGMAVIDSTIETIRISLE-NPGIFNQWAHSAAVYLAEL 761
Query: 749 YNYEHVDSSVIFDTLYLILVF 769
Y++E D +I LY ++ +
Sbjct: 762 YSFELCDEDLILKILYQLISY 782
>gi|268536902|ref|XP_002633586.1| C. briggsae CBR-SMG-3 protein [Caenorhabditis briggsae]
Length = 1137
Score = 170 bits (431), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 180/745 (24%), Positives = 326/745 (43%), Gaps = 110/745 (14%)
Query: 62 KICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIGI 121
++C + Y +FS + G K P K D+ K R + L EL G+
Sbjct: 100 ELCLAVSAMYSNFSEQMA-GEFKKILPVKK-----TDKITNVAKLRVDIIFLAELCLCGV 153
Query: 122 IEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFAR----QGRIFLGLPLSGPGQEIY 177
+ + LT + D N LLA+ +R Q + +PL + +
Sbjct: 154 FNEKEGLQVLGAVLTYLIQTDKIDFV--NYGLLATVSRCVGWQIANIIPIPLGDDNETVK 211
Query: 178 EE---FFKGLNITADQKKIFKKAFHTYYNAV----QELLQAEHTSLRQMENENAKILNAK 230
E ++ DQKK ++ F YY+ + +++ A + ++++++ + ++
Sbjct: 212 IEETDLPTSSALSGDQKKSIRELFKVYYDVLYAKTEKICSARNKAMKKVKRQE----RSR 267
Query: 231 GELSEENSSSYEKLRKSYDHLYR--NVSSLAEALDMQP----PVMPEDVHTTRVTSGEDA 284
G+ ++E + + +L+ D L + N S A + M+P E+ + G
Sbjct: 268 GDAADEEKAKFNELQAELDTLRKMTNELSCAIGITMKPLKEEASDDEEDEAANLEMGRQL 327
Query: 285 SPASGKDSSVPEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDP 344
+ + K +W DEET+AFY L DLR VP L E+E +
Sbjct: 328 AEGAIK-------LWSDEETKAFYADLIDLRLMVPKDLYKESEQRT-------------- 366
Query: 345 ASEPDQGQLAAQDTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEK 404
L+ AE D+ D E + A D + + ++E
Sbjct: 367 --------LSKAKMAERIEDI-------------DVENINESGAVDAKRTMSRANSEKES 405
Query: 405 DKEKAKDPDKEKGKEKDTERKVETEKEKLKGVEGTN-LDALLQRLPGCVSRDLIDQLTVE 463
E ++E V T KE + G N + L VS+ D+
Sbjct: 406 TPE-------------ESEAAVPT-KEDISEDRGVNKWQKFVLDLDHLVSKYSTDKAAEY 451
Query: 464 FCY-LNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNF 522
F LN+K RKRLV+ + P T ++++P+Y+R++ATL M D+++ ++ L ++F
Sbjct: 452 FVSNLNNKGCRKRLVKLMVEPPPTRIDVVPFYARLIATLENVMPDLTTEIVTQLLDKFRG 511
Query: 523 LINKKDQ------MNIETKIRNIRFIGELCKFKIA--PAGLVFSCLKACLDDFTHHNIDV 574
+ +K + +E K+ + I EL KF + P GL SCL+ + D H++++
Sbjct: 512 FLQQKPSSSSAIAIKVEAKMVCVMMIAELMKFGVISRPEGL--SCLRQLVYDLRGHSVEM 569
Query: 575 ACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSA 634
+E+ G +LYR E+ +M +LE++ + K + D R L++NAY+ C PPE S
Sbjct: 570 TATFMESGGLYLYRHTESHAKMKRLLEVV-KAKRERMKDQRQAMLIDNAYFTCLPPEDSK 628
Query: 635 ------RVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKV 686
+ + P+ ++IR ++ D++ +++++ L+ LR+L WSD E Y ++
Sbjct: 629 EERLRLKFDEEDTPMKKFIRHVVL-DINDTNVDNHLKCLRRLDWSDPEISDYTIRYLSST 687
Query: 687 HKGKYGQIHLIASLTAGLS--RYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRF 744
+ +AS AGL ++ +AV+D ++ IR+ LE N Q + +
Sbjct: 688 WLLPIENLQHLASAIAGLCNLQHLQWIGMAVIDSTIQTIRISLE-NPGNFNQWAHSAAVY 746
Query: 745 LGELYNYEHVDSSVIFDTLYLILVF 769
L ELY++E D +I LY ++ +
Sbjct: 747 LAELYSFELCDEDLIIQILYQLISY 771
>gi|313238485|emb|CBY19982.1| unnamed protein product [Oikopleura dioica]
Length = 889
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 84/197 (42%), Positives = 120/197 (60%), Gaps = 2/197 (1%)
Query: 576 CNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSAR 635
C LLE+ GRFL+RSP++ + +LE L R KN KNLD R + ++NA Y C PP R
Sbjct: 3 CGLLESAGRFLFRSPDSHQKTKLLLEQLKRKKNSKNLDARLLAQLDNAIYCCNPPTEVHR 62
Query: 636 VSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQ 693
+ RP L +YI +LL+ L K ++ VL+Q RK+ W D E Y++ + K+
Sbjct: 63 EVEKRPTLQEYIHRLLYDLLSKRTVAFVLKQFRKMNWKDVEIREYIIDALSAGYNVKFSV 122
Query: 694 IHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEH 753
+H AS+ AG+S YH+E A+ +VD +LE+I+ +E D QRRL +++L ELYNY+
Sbjct: 123 VHCAASVLAGISEYHEEEAIEIVDNILEDIKATMEFPDPRFNQRRLIQVKYLAELYNYKM 182
Query: 754 VDSSVIFDTLYLILVFG 770
V S VIF TLY + G
Sbjct: 183 VSSEVIFTTLYSFITLG 199
>gi|218195237|gb|EEC77664.1| hypothetical protein OsI_16692 [Oryza sativa Indica Group]
gi|222629229|gb|EEE61361.1| hypothetical protein OsJ_15506 [Oryza sativa Japonica Group]
Length = 480
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 80/124 (64%), Positives = 96/124 (77%)
Query: 404 KDKEKAKDPDKEKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVE 463
K+++ K K +E D R + E+ K + EG NLD L+Q+LPGC SRDLIDQLTVE
Sbjct: 41 KNRDDKKKSRKHISRENDAVRNGDLERAKARVTEGANLDTLIQKLPGCSSRDLIDQLTVE 100
Query: 464 FCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFL 523
FCYLNSK+NRK+L ALFNVPRTSLELL YYSR+VATLST MKD+ S+ + MLE+EFNFL
Sbjct: 101 FCYLNSKANRKKLAWALFNVPRTSLELLTYYSRLVATLSTYMKDLPSITLSMLEDEFNFL 160
Query: 524 INKK 527
INKK
Sbjct: 161 INKK 164
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/75 (80%), Positives = 68/75 (90%)
Query: 701 TAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIF 760
TAGLS YH++FAVAVVDEVLEEIR+GLELNDY MQQ+RLAHM+F GELYNYEH+ SS+IF
Sbjct: 172 TAGLSHYHEDFAVAVVDEVLEEIRVGLELNDYSMQQQRLAHMQFFGELYNYEHIGSSIIF 231
Query: 761 DTLYLILVFGHGTAE 775
TLYLI+VFGH T E
Sbjct: 232 QTLYLIIVFGHKTPE 246
>gi|340507615|gb|EGR33548.1| mif4g domain protein [Ichthyophthirius multifiliis]
Length = 805
Score = 163 bits (412), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 104/335 (31%), Positives = 171/335 (51%), Gaps = 9/335 (2%)
Query: 458 DQLTVEFCY----LNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLI 513
D L +EFC ++ +K+LVR + + ++P R VA +S KD++ L+
Sbjct: 305 DCLELEFCVDFGENEAEIKQKKLVRDILEYRKEYNLMVPQLCRFVAVVSKYFKDLADFLV 364
Query: 514 QMLEEEFNFLI--NKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHN 571
+ ++FN N++D + KIR ++++ EL KFK+ G + LK+ +DDF+
Sbjct: 365 DKVIKDFNIYKEKNRQDFSFRDKKIRYLKYLCELVKFKVVDLGKILDILKSLIDDFSTQQ 424
Query: 572 IDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPP- 630
ID+ C +L+ CGRFLY+ E+ R +L+ L NL + +EN+ L KP
Sbjct: 425 IDLVCAILDNCGRFLYKCNESRFRYCGLLDNLQWKLQKANLPTNKLIQLENSINLSKPSK 484
Query: 631 ERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSD-CESYLLKCFM-KVHK 688
+R + K ++I L+F L+ + + V L + W++ E Y K M K+ K
Sbjct: 485 KRQIKAPKEETEEQKFINYLIFYVLNIQNFKQVTEVLSNMNWNEQLEQYCFKAIMKKMTK 544
Query: 689 GKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGEL 748
GK QI L A + + L++ + +VDE++E G+E N QQ+R+ +R L EL
Sbjct: 545 GKVDQIQLCAGVISFLNKLRPSITIKIVDELIERTIFGMETNQVQEQQKRINVIRLLSEL 604
Query: 749 YNYEHVDSSVIFDTLYLILVFGHGTAETYWTHQKI 783
Y + ++ IF LY+IL FGH Q+I
Sbjct: 605 YIFNVLEIDFIFTVLYMILNFGHEDFRDIEEQQRI 639
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 121/275 (44%), Gaps = 34/275 (12%)
Query: 59 YFLKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDL-DADRNLKAMKKRSTLKLLLELY 117
YF+++CS LHQ Y++F+ LI + + K+ L + D + ++K+R ++ L EL+
Sbjct: 100 YFMQLCSKLHQTYEEFAGTLITNITR---QIKTNIKLKEKDDKIISIKRREMMRFLCELF 156
Query: 118 FIGIIEDSSIFINIIKDLTSIEHLKDRDT----TQTNLTLLASFARQGRIFLGLPLSGPG 173
IG F +++ L I KD + QT L FA + G L G
Sbjct: 157 VIGF---PVSFEKVMECLREIISQKDSKSILLNVQTALMFSTQFAFEIFGKRGFKL-GYY 212
Query: 174 QEIYEEFFKGLNITAD---QKKIFK--KAFHTYYNAVQELLQAEHTSLRQMENENAKILN 228
E YE N Q+KI K ++ Y + E L+ + + + + KIL
Sbjct: 213 HEKYENLPNIFNFDYQIIPQEKILKILQSMQQYIYRLTEQLKQLYEQKQVLSEKVKKILE 272
Query: 229 AKGELSEENSS-SYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPA 287
+GE+ E++ Y + K+Y L+ +S++A+ L+++ V GE+ +
Sbjct: 273 EEGEIFEKDVELQYNRTIKNYKQLFEALSTIADCLELEFC----------VDFGENEAEI 322
Query: 288 SGKDSSVPEPVWDDEETRAFYECL-PDLRAFVPAV 321
K + V D E R Y + P L FV V
Sbjct: 323 KQK-----KLVRDILEYRKEYNLMVPQLCRFVAVV 352
>gi|57834115|emb|CAE05710.2| OSJNBb0065J09.6 [Oryza sativa Japonica Group]
gi|116310940|emb|CAH67877.1| OSIGBa0153E02-OSIGBa0093I20.6 [Oryza sativa Indica Group]
Length = 475
Score = 163 bits (412), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 80/124 (64%), Positives = 96/124 (77%)
Query: 404 KDKEKAKDPDKEKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVE 463
K+++ K K +E D R + E+ K + EG NLD L+Q+LPGC SRDLIDQLTVE
Sbjct: 41 KNRDDKKKSRKHISRENDAVRNGDLERAKARVTEGANLDTLIQKLPGCSSRDLIDQLTVE 100
Query: 464 FCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFL 523
FCYLNSK+NRK+L ALFNVPRTSLELL YYSR+VATLST MKD+ S+ + MLE+EFNFL
Sbjct: 101 FCYLNSKANRKKLAWALFNVPRTSLELLTYYSRLVATLSTYMKDLPSITLSMLEDEFNFL 160
Query: 524 INKK 527
INKK
Sbjct: 161 INKK 164
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 60/75 (80%), Positives = 68/75 (90%)
Query: 701 TAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIF 760
TAGLS YH++FAVAVVDEVLEEIR+GLELNDY MQQ+RLAHM+F GELYNYEH+ SS+IF
Sbjct: 172 TAGLSHYHEDFAVAVVDEVLEEIRVGLELNDYSMQQQRLAHMQFFGELYNYEHIGSSIIF 231
Query: 761 DTLYLILVFGHGTAE 775
TLYLI+VFGH T E
Sbjct: 232 QTLYLIIVFGHKTPE 246
>gi|145528494|ref|XP_001450041.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124417641|emb|CAK82644.1| unnamed protein product [Paramecium tetraurelia]
Length = 874
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/331 (29%), Positives = 177/331 (53%), Gaps = 13/331 (3%)
Query: 446 QRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCM 505
Q+ C S ++ DQ+ +EF +N+K NRK+L+ + N + ++PY R+ ATL
Sbjct: 357 QKQKDCSSIEIADQMALEF--VNTKQNRKKLLEEMQNFKQNYTIVIPYQCRLFATLCKHY 414
Query: 506 KDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLD 565
K+ +I+ E++ + K ++E K R +R++ EL KFKI ++ L L+
Sbjct: 415 KEFEEEIIKSFFEQYKQI---KPNDHLERKQRYLRYLCELTKFKILKQDIILDILAQLLE 471
Query: 566 DFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYY 625
D +N+++ +L CGRFL S E+ + +L L + + +K L + + + A
Sbjct: 472 DLVSYNVEMIALILNNCGRFLKYSGESYKKFEYLLTQLDKQRKLKPLAQKEESTLTQALL 531
Query: 626 LCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSD--CESYLLKCF 683
+R + K + + ++I+ ++F LD + + +LP SD C+ YL+K
Sbjct: 532 ---SFDRQVKPKKEKSEIQKFIKFIIFDQLD--DFNNAFETMERLPLSDQECKKYLIKQL 586
Query: 684 MKVH-KGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHM 742
K+ KG+Y + ++A L A L + + VVD +L++I GLE N+ +QRR+ +
Sbjct: 587 FKISIKGRYSTLSIVACLLATLKDKYPDITGQVVDSLLDDIICGLEDNNINKRQRRITII 646
Query: 743 RFLGELYNYEHVDSSVIFDTLYLILVFGHGT 773
+ +GELY Y+ +D ++F LYLI+ +GH +
Sbjct: 647 KMIGELYAYQIIDQELLFKLLYLIIEYGHAS 677
>gi|390465080|ref|XP_002750087.2| PREDICTED: regulator of nonsense transcripts 2-like, partial
[Callithrix jacchus]
Length = 613
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 139/430 (32%), Positives = 219/430 (50%), Gaps = 48/430 (11%)
Query: 63 ICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIGII 122
+CSL HQRY DF+P L+ K F K ++ K R+ L+ + EL +GI
Sbjct: 224 LCSLFHQRYADFAPSLLQVWKKHFEARKE------EKTPNITKLRTDLRFIAELTIVGIF 277
Query: 123 EDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGL---PLSGPGQEIYE 178
D I + L +I + DR++ T+++++ SF R G GL + ++
Sbjct: 278 TDKEGLSLIYEQLKNIINA-DRES-HTHVSVVISFCRHCGDDIAGLVPRKVKSAAEKFNL 335
Query: 179 EFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENS 238
F I+ ++++ F+ Y+ ++ + L+ +H L+ E +N +IL++KGELSE+
Sbjct: 336 SFPPSEIISPEKQQPFQNLLKEYFTSLTKHLKRDHRELQNTERQNRRILHSKGELSEDRH 395
Query: 239 SSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTS-GEDA-SPASGKDSSVPE 296
YE+ SY L N SLA+ LD P +P+D T G D +P + +
Sbjct: 396 KQYEEFAMSYQKLLANSQSLADLLDENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDLEG 455
Query: 297 PVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQ 356
+W+DE+ R FYE L DL+AFVPA+L K NE S + E D E + ++
Sbjct: 456 GIWEDEDARNFYENLIDLKAFVPAILF-----KDNEKSCQNKEPNKDDTKEAKE----SK 506
Query: 357 DTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEK 416
D EVS SP+ D E + + + D + +G D +A+D K+
Sbjct: 507 DNKEVS-----SPD--------DLELELENLEINDDTLELEGGD-------EAEDLTKKL 546
Query: 417 GKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCY-LNSKSNRKR 475
E++ E + + LK + +DA LQ+LP CV+RDLID+ ++FC +N+K+NRK+
Sbjct: 547 LDEQEQEDEEASTGSHLKLI----VDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANRKK 602
Query: 476 LVRALFNVPR 485
LVRALF VPR
Sbjct: 603 LVRALFIVPR 612
>gi|323333243|gb|EGA74641.1| Nmd2p [Saccharomyces cerevisiae AWRI796]
Length = 365
Score = 159 bits (402), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 155/287 (54%), Gaps = 12/287 (4%)
Query: 491 LPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNI-ETKIRNIRFIGELCKFK 549
LP YSR +AT S M ++ S I L+ F + Q++ + ++NI F E+ KF+
Sbjct: 9 LPVYSRFIATNSKYMPEIVSEFINYLDNGF------RSQLHSNKINVKNIIFFSEMIKFQ 62
Query: 550 IAPAGLVFSCLKACLDDF-THHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKN 608
+ P+ ++F ++ + +N+++ LLE G+FL PE M M++++ KN
Sbjct: 63 LIPSFMIFHKIRTLIMYMQVPNNVEILTVLLEHSGKFLLNKPEYKELMEKMVQLIKDKKN 122
Query: 609 VKNLDPRHVTLVENAYYLCKPPE-RSARVS-KVRPPLHQYIRKLLFSDLDKSSIEHVLRQ 666
+ L+ +EN L PP +S V+ K P Q+ R L+ S+L +H+++
Sbjct: 123 DRQLNMNMKGALENIITLLYPPSVKSLNVTVKTITPEQQFYRILIRSELSSLDFKHIVKL 182
Query: 667 LRKLPWSDC--ESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIR 724
+RK W D + L F K HK Y I L+ + GL Y +F + +D+VLE I
Sbjct: 183 VRKAHWDDVAIQKVLFSLFSKPHKISYQNIPLLTKVLGGLYSYRRDFVIRCIDQVLENIE 242
Query: 725 LGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
GLE+NDYG R++++R+L E++N+E + S V+ DT+Y I+ FGH
Sbjct: 243 RGLEINDYGQNMHRISNVRYLTEIFNFEMIKSDVLLDTIYHIIRFGH 289
>gi|294944419|ref|XP_002784246.1| hypothetical protein Pmar_PMAR003505 [Perkinsus marinus ATCC 50983]
gi|239897280|gb|EER16042.1| hypothetical protein Pmar_PMAR003505 [Perkinsus marinus ATCC 50983]
Length = 1212
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/374 (28%), Positives = 182/374 (48%), Gaps = 38/374 (10%)
Query: 425 KVETEKEKLKGV---EGTNLDALLQRLPGCVSRDLIDQLTVEFCY--LNSKSNRKRLVRA 479
K E + E KG D L L C RD D+L+ ++ LN+K NR++L R
Sbjct: 424 KAEVDSEVAKGATTAASAAFDVWLNNLRTCERRDTADELSQKWFEEGLNTKQNRRKLARF 483
Query: 480 LFNVPRTSLE--LLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIR 537
+ N P+ + P + R+VA ++ KD+ L + + + K + + ++
Sbjct: 484 ILN-PKDKARGTVPPEWLRVVANIAPWAKDLVDALSSQALKRLDEALGKNEMDKVGEQMV 542
Query: 538 NIRFIGELCKFKIAPAGLVFSCLKACLDD---FTHHNIDVACNLLETCGRFLYRSPETSI 594
+R + ++CKF++ P G+V K +D H ++A L +CGR+L P+T+
Sbjct: 543 CLRLLAQMCKFRLVPPGVVMDFFKRLMDGGHLANDHWAEMASQLCLSCGRYLLYKPDTAT 602
Query: 595 RMANMLEILMRLKN--VKNLDPRHVTLVENAYYLCKPPERSARV---SKVRPPLHQYIRK 649
RM N++E + +LKN + L +E+AY+ KP + V + RP + + IRK
Sbjct: 603 RMDNLVERMWKLKNSATQALTASADVSLEDAYFYMKPRKTKFGVKGGDQDRPIMERLIRK 662
Query: 650 LLFSDLDKSSIEHVLRQLRKLPW---------------------SDCESYLLKCFMKVH- 687
L+F D+ E LR RKLPW S+ ++ C + ++
Sbjct: 663 LIFQDIYILDEEEGLRLARKLPWEHHVSDEDGKVKIGDRCNEEDSEVYKWMKDCVLDLNV 722
Query: 688 KGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGE 747
Y ++ +ASL +GL+R+ F + VVDE++E I++G E D R+ ++ +GE
Sbjct: 723 HANYDCMYSLASLLSGLARFRPRFVIEVVDELMENIQIGCEREDPRESSSRVRQIKLVGE 782
Query: 748 LYNYEHVDSSVIFD 761
LY Y +DS+ IFD
Sbjct: 783 LYIYCVLDSATIFD 796
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 69/141 (48%), Gaps = 12/141 (8%)
Query: 193 IFKKAFHTYYN-AVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHL 251
I K Y N AV +L H + E N ++ +G + EN+S Y L +++ L
Sbjct: 281 IVKAIVKFYTNFAVPQLYPVAHEQMLAQEQFNTRLRVDRGTVDAENASKYSSLATAFEKL 340
Query: 252 YRNVSSLAEALDMQPPVMP--EDVHTTRVTSGEDASPASGKDSS-------VPEPVWDDE 302
++ S+AE LD+ PP +P E TR+T S S KD + + +W D+
Sbjct: 341 STHLKSIAEILDLPPPKLPGEETESKTRLTGPTQES--SKKDEGGLSEQERMLQLLWVDD 398
Query: 303 ETRAFYECLPDLRAFVPAVLL 323
R+FYE L DL + +P VLL
Sbjct: 399 SDRSFYEDLYDLESRLPPVLL 419
>gi|159478184|ref|XP_001697184.1| hypothetical protein CHLREDRAFT_119808 [Chlamydomonas reinhardtii]
gi|158274658|gb|EDP00439.1| predicted protein [Chlamydomonas reinhardtii]
Length = 225
Score = 154 bits (388), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 73/136 (53%), Positives = 100/136 (73%)
Query: 640 RPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCESYLLKCFMKVHKGKYGQIHLIAS 699
R PLH+YIR L+F L +SSI VLR+L KLPW+ E Y++KC +KV +G+Y I L++
Sbjct: 1 RSPLHEYIRHLIFDVLAESSIPTVLRKLLKLPWAAHEQYVVKCLLKVVRGRYANIPLVSC 60
Query: 700 LTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVI 759
L AGL++YHD VA+VD VLE+IRLGLE G+ Q+R+A +R LGELYNY +S+ +
Sbjct: 61 LAAGLAQYHDSVGVALVDCVLEDIRLGLETPGAGLYQKRMADVRLLGELYNYMLCNSTPV 120
Query: 760 FDTLYLILVFGHGTAE 775
F+TLYL++ FGH + E
Sbjct: 121 FETLYLLVTFGHESPE 136
>gi|365984523|ref|XP_003669094.1| hypothetical protein NDAI_0C01910 [Naumovozyma dairenensis CBS 421]
gi|343767862|emb|CCD23851.1| hypothetical protein NDAI_0C01910 [Naumovozyma dairenensis CBS 421]
Length = 1080
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 184/357 (51%), Gaps = 14/357 (3%)
Query: 426 VETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCY--LNSKSNRKRLVRALFNV 483
VE K++ K +++ L +++ IDQ+++++ +++K+ R RL++ F +
Sbjct: 360 VEQSKKENKIGTADQINSFFHSLDKIDTKEEIDQISIDYWTSGIDNKATRNRLLK--FFI 417
Query: 484 PRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIG 543
+ Y+R +AT + + +V+ I+ L+ F ++ +++N+ +NI F
Sbjct: 418 ETQDWSKIKVYARFLATTNKYLPEVTEEFIKYLDNGFRSQLHS-NRINV----KNIIFYS 472
Query: 544 ELCKFKIAPAGLVFSCLKA-CLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEI 602
E+ KF + P+ ++F +++ L+ +NI++ LE G+FL PE +M M+++
Sbjct: 473 EMMKFMLIPSFMIFHKIRSLILNMLIPNNIEILTVFLEHSGKFLINKPELKPQMEKMVQL 532
Query: 603 LMRLKNVKNLDPRHVTLVENAYYLCKPPE-RSARVSKVR-PPLHQYIRKLLFSDLDKSSI 660
+ K + L+ + +EN L PP +S V K P Q+ R L+ S+L
Sbjct: 533 IQEKKRDRQLNLNTKSALENIMALLYPPSMKSLNVDKKEYTPEQQFFRILIRSELSNIDP 592
Query: 661 EHVLRQLRKLPWSDCESY--LLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDE 718
+ ++ LRK W + E+ L F K K Y + +A L GL YH EF + +D+
Sbjct: 593 RYAIKILRKAHWENPETTRTLFSLFTKPGKINYQNLPTMAKLLNGLFTYHREFIIKCIDQ 652
Query: 719 VLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHGTAE 775
+LE I GLE N Y + R+A++++L E++N E + S V+ LY IL FGH +
Sbjct: 653 ILENIEGGLETNLYAENRHRVANVKYLTEIFNMEMIKSDVLLAKLYQILQFGHQNGQ 709
>gi|366996134|ref|XP_003677830.1| hypothetical protein NCAS_0H01720 [Naumovozyma castellii CBS 4309]
gi|342303700|emb|CCC71482.1| hypothetical protein NCAS_0H01720 [Naumovozyma castellii CBS 4309]
Length = 1053
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/358 (28%), Positives = 181/358 (50%), Gaps = 14/358 (3%)
Query: 421 DTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCY--LNSKSNRKRLVR 478
D + VET + +++ + S+ ID+L + + +++K+ R RL++
Sbjct: 352 DIQEVVETANIESVNASTDQINSFFTEMETANSKADIDKLCLTYWSSGIDNKATRNRLLK 411
Query: 479 ALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRN 538
F + L Y+R +AT M +++ +Q L+ F ++ +++N+ +N
Sbjct: 412 --FFIETKEWSKLNIYARFLATNHKYMPEITDEFVQYLDNGFRSQLHS-NRLNL----KN 464
Query: 539 IRFIGELCKFKIAPAGLVFSCLKACLDDF-THHNIDVACNLLETCGRFLYRSPETSIRMA 597
I F E+ KF + P +VF +++ + + +NI++ LE G+FL +PET +M
Sbjct: 465 IMFYSEMMKFMLIPLFMVFHKIRSLIMNMQVPNNIEILTVFLEYSGKFLINNPETKPQME 524
Query: 598 NMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPE-RSARVSKVR-PPLHQYIRKLLFSDL 655
M++++ + L+ +EN L PP +S + K + P Q+ R L+ S+L
Sbjct: 525 KMVQLIRDKTKDRQLNINTKNALENIITLLYPPSVKSLNLKKKQYTPEQQFYRILIRSEL 584
Query: 656 DKSSIEHVLRQLRKLPWSDCESY--LLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAV 713
+H ++ LRK W D Y LL F K K Y + + + GL YH F +
Sbjct: 585 SNIDSKHTIKLLRKAHWDDPAVYKTLLSLFTKPWKINYQNVPTLVKILNGLYMYHRNFII 644
Query: 714 AVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
+D+VLE+I GLE+N+Y + R+A +R+L E+YN E + S V+ + ++ IL FGH
Sbjct: 645 KCIDQVLEDIERGLEINEYSENRHRIAQVRYLVEIYNMEMIKSDVLLEKIFQILKFGH 702
>gi|241951168|ref|XP_002418306.1| nonsense-mediated mrna decay protein, putative; up-frameshift
suppressor, putative [Candida dubliniensis CD36]
gi|223641645|emb|CAX43606.1| nonsense-mediated mrna decay protein, putative [Candida
dubliniensis CD36]
Length = 1032
Score = 149 bits (377), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 116/411 (28%), Positives = 198/411 (48%), Gaps = 26/411 (6%)
Query: 379 DKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEK---------GKEKDTERKVETE 429
D ++KE E+ + E K K E D + KEK G+ + + E
Sbjct: 312 DDQDKEGEEPTNAVVEVVKSKSMNEDDLNGVWEDIKEKNFYTVIPSVGELIEAHPNTDKE 371
Query: 430 KEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEF--CYLNSKSNRKRLVRALFNVPRTS 487
+ +G + A LQ+L S +L DQL VEF LN+K+ + R+++ F V S
Sbjct: 372 SRTSQSRDGERIQAFLQKLENINSYEL-DQLVVEFNNLNLNNKATKNRIMK--FFVDTAS 428
Query: 488 LELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCK 547
++ L YY+R + + D+ LI L++ F + ++++N +NI F E+ K
Sbjct: 429 IDSLKYYTRFLKINEVNLSDLIEELINYLDKGFRSQL-YQNKLNF----KNILFFVEMIK 483
Query: 548 FKIAPAGLVFSCL-KACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRL 606
FK+ P ++F + K L+ + +NID+ E GRF P+ M M+++L
Sbjct: 484 FKMIPTHIIFHKIRKLTLNITSTNNIDILSVFYEHVGRFSLNDPDYKDLMREMIDMLKET 543
Query: 607 KNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRP---PLHQYIRKLLFSDLDKSSIEHV 663
NL + N + +PP + + +P P Q+I++L+ +LD +S+ V
Sbjct: 544 SKRPNLKINDKLAINNLLLIVEPPTTKVKSLQTKPELSPKSQFIQRLIRVELDNTSLPLV 603
Query: 664 LRQLRKLPWS---DCESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVL 720
+ L+K+ +C + +L CF Y I +A++ + + V VD +
Sbjct: 604 VNLLKKIHMKQEEECCATILDCFAHPELINYDNITALAAVLEVYFTKYKKIVVYTVDTTI 663
Query: 721 EEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
E I GLELNDY M + R+A ++F+ E+YN+ ++ ++ D LY IL FGH
Sbjct: 664 ENIIRGLELNDYRMNRVRMAQVKFVAEMYNHRVINFKLVNDLLYRILCFGH 714
Score = 43.9 bits (102), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 120/291 (41%), Gaps = 51/291 (17%)
Query: 61 LKICSLLHQRY-KDFSPCL-IDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYF 118
+++ S LHQR+ FSP L ++ L+ + PG + + + + +++R+ LKL++E Y
Sbjct: 94 MEVVSALHQRFTSQFSPMLLVNMLVAISNPGPNEVTDEKEDTSRILRQRNLLKLIMEFYI 153
Query: 119 IGIIED----------------------SSIFINIIKDLTSIEHLKDRDTTQTNLTLLAS 156
IGI + I I ++KDL + + +K +T L ++ S
Sbjct: 154 IGIFTNLKMCSKDIIPDEILVKYAKSASEPIIIVVLKDLLTYK-IKSGNT----LAIVQS 208
Query: 157 FARQGRIFLGLPLSGPGQEIYEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSL 216
F ++ + IY+ + L + + ++ F Y + E +
Sbjct: 209 FLKRFK-----------HIIYDSTNELLQFEV--RNVLQQIFTIYTRTIFETSVELKKRV 255
Query: 217 RQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTT 276
Q+ + K G + EEN E + K ++ ++ LD+ P+ E
Sbjct: 256 HQVTEKGKKASIRTGRILEENQIEIESVTKLFEKFKSTSEFVSSILDV--PLPNELQADD 313
Query: 277 RVTSGEDASPA---SGKDSSVPEP----VWDDEETRAFYECLPDLRAFVPA 320
+ GE+ + A K S+ E VW+D + + FY +P + + A
Sbjct: 314 QDKEGEEPTNAVVEVVKSKSMNEDDLNGVWEDIKEKNFYTVIPSVGELIEA 364
>gi|255723932|ref|XP_002546895.1| hypothetical protein CTRG_01200 [Candida tropicalis MYA-3404]
gi|240134786|gb|EER34340.1| hypothetical protein CTRG_01200 [Candida tropicalis MYA-3404]
Length = 1056
Score = 149 bits (375), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 106/355 (29%), Positives = 179/355 (50%), Gaps = 18/355 (5%)
Query: 427 ETEKEKLKGV-EGTNLDALLQRLPGCVSRDLIDQLTVEF--CYLNSKSNRKRLVRALFNV 483
+TE+E G +G + L +L S DL DQL VEF LN+K+ + R+++ F +
Sbjct: 367 QTEEESQSGSRDGEKIQEFLNKLDNINSYDL-DQLVVEFNNLNLNNKATKNRIMK--FFM 423
Query: 484 PRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIG 543
S+ L YY+R + + D+ + LI L++ F + ++++N +NI F
Sbjct: 424 EAFSINSLKYYTRFLKINEVNLSDLIAELITYLDKGFRSQL-YQNKLNF----KNILFFV 478
Query: 544 ELCKFKIAPAGLVFSCLKACLDDFTH-HNIDVACNLLETCGRFLYRSPETSIRMANMLEI 602
E+ KFK+ P ++F ++ + T +NID+ E GRFL P+ M M+++
Sbjct: 479 EMIKFKMIPTHVIFHKIRNLTINITSTNNIDILSVFYEHVGRFLLYDPDYKDLMRQMIDL 538
Query: 603 LMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVR---PPLHQYIRKLLFSDLDKSS 659
L NL + N +PP + + + P Q+I++L+ +LD SS
Sbjct: 539 LKEKSKQPNLKINDKLAINNLLVTVEPPATKVKALQEKQQLSPRAQFIQRLIRVELDSSS 598
Query: 660 IEHVLRQLRKLPW---SDCESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVV 716
V+R LRK+P +C + LL CF Y I +A++ + V V
Sbjct: 599 KSLVIRLLRKIPMKQDDECCATLLDCFAHPEFLNYDNIPALATVLESYCEKFKKIVVYTV 658
Query: 717 DEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
D ++E I GLELNDY M + R++ ++F+ E+YN++ ++ ++ D LY I+ FGH
Sbjct: 659 DTIIENIIRGLELNDYRMNRVRMSQVKFIAEMYNHKVINFKLVNDLLYRIICFGH 713
Score = 47.4 bits (111), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 118/303 (38%), Gaps = 47/303 (15%)
Query: 57 LVYFLKICSLLHQRY-KDFSPCLIDGLLKVFF--PGKSGEDLDADRNLKAMKKRSTLKLL 113
+V ++I S LHQR+ FSP L+ LL P + E+ + + + + K+R+ LKL+
Sbjct: 90 VVASMEIISALHQRFTSQFSPVLLINLLVAIANPPKGTQEEDEKEVSSRISKQRNVLKLI 149
Query: 114 LELYFIGIIED----------------------SSIFINIIKDLTSIEHLKDRDTTQTNL 151
+E Y IG+ + I I +IKDL + + LK ++ L
Sbjct: 150 MEFYLIGVFSNLKMCNKDIIPDEILLKFGKSASEPIIIVVIKDLLNYQ-LKSGNS----L 204
Query: 152 TLLASFARQGRIFLGLPLSGPGQEIYEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQA 211
++ S+ ++ IY++ L + + ++ F Y NA + L
Sbjct: 205 VIVQSYLKRFH-----------HVIYQDDNDLLQFEV--RNVLRQIFTIYTNATYDTLIG 251
Query: 212 EHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPE 271
+ Q+ N K G + +E + + K Y+ L+ + + P E
Sbjct: 252 LKKKVHQISERNKKASIRTGRILDEIQTELDSTTKIYEKFKSAAEFLSPVVGIPLPKQLE 311
Query: 272 DVHTTRVTSGEDASPASGKDSSVPEP----VWDDEETRAFYECLPDLRAFVPAVLLGEAE 327
+ K S+ E VW+D + + FY +P L + A E E
Sbjct: 312 ENDEPEANEENSNVVEVVKTKSMNEDELNGVWEDIKEKNFYTVIPSLGELIEAHPQTEEE 371
Query: 328 HKA 330
++
Sbjct: 372 SQS 374
>gi|68469713|ref|XP_721108.1| potential nonsense-mediated mRNA decay factor [Candida albicans
SC5314]
gi|68469954|ref|XP_720987.1| potential nonsense-mediated mRNA decay factor [Candida albicans
SC5314]
gi|46442882|gb|EAL02168.1| potential nonsense-mediated mRNA decay factor [Candida albicans
SC5314]
gi|46443010|gb|EAL02295.1| potential nonsense-mediated mRNA decay factor [Candida albicans
SC5314]
gi|238882147|gb|EEQ45785.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 1034
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 120/410 (29%), Positives = 199/410 (48%), Gaps = 28/410 (6%)
Query: 381 EEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEK---------GKEKDTERKVETEKE 431
++KE+E+ + E K K E D + KEK G+ + + E
Sbjct: 314 QDKEEEEPTNTVVEVVKSKSMNEDDLNGVWEDVKEKNFYTVIPSVGELIEAHPNTDEESR 373
Query: 432 KLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEF--CYLNSKSNRKRLVRALFNVPRTSLE 489
+ +G + A LQ++ S +L DQL VEF LN+K+ + R+++ F V S++
Sbjct: 374 SSQSRDGERIQAFLQKMENINSYEL-DQLVVEFNNLNLNNKATKNRIMK--FFVETASID 430
Query: 490 LLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFK 549
L YY+R + + D+ LI L++ F + ++++N +NI F E+ KFK
Sbjct: 431 SLKYYTRFLKINEMNLFDLIEELINYLDKGFRSQL-YQNRLNF----KNILFFVEMIKFK 485
Query: 550 IAPAGLVFSCL-KACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKN 608
+ P ++F + K L+ + +NID+ E GRFL P+ M M+E+L
Sbjct: 486 MIPTHIIFHKIRKLTLNITSTNNIDILSVFYEHVGRFLLNDPDYKDLMREMIEMLRETSK 545
Query: 609 VKNLDPRHVTLVENAYYLCKPPERSARVSKVRP---PLHQYIRKLLFSDLDKSSIEHVLR 665
NL + N + +PP + + +P P Q+I++L+ +L+ +S+ V+
Sbjct: 546 RPNLKINDKLAINNLLLIVEPPTTKVKSLQTKPELSPKSQFIQRLIRVELNNTSLPLVVN 605
Query: 666 QLRKLPWS---DCESYLLKCFMKVHKGKYGQI-HLIASLTAGLSRYHDEFAVAVVDEVLE 721
L+K+ +C +L C Y I L A L A S+Y + V VD +E
Sbjct: 606 LLKKIHMKQEKECCDTILDCLAHPELINYDNIPALAAVLEAYFSKYK-KIVVYTVDTTIE 664
Query: 722 EIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
I GLELNDY M + R+A ++F+ E+YN+ ++ +I D LY IL FGH
Sbjct: 665 NIIRGLELNDYRMNRVRMAQVKFVAEMYNHRVINFKLINDLLYRILCFGH 714
>gi|363756112|ref|XP_003648272.1| hypothetical protein Ecym_8169 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891472|gb|AET41455.1| Hypothetical protein Ecym_8169 [Eremothecium cymbalariae
DBVPG#7215]
Length = 1019
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 105/344 (30%), Positives = 170/344 (49%), Gaps = 16/344 (4%)
Query: 436 VEGTNLDALLQRLPGCVSRDLIDQLTVEFCY--LNSKSNRKRLVRALFNVPRTSLELLPY 493
V+ L + L C S+D+ID+L+ + L++K+ RKRL++ P S L
Sbjct: 369 VKSEPLKQFFKDLEACDSKDMIDELSYRYWKDGLDNKATRKRLLKFFIEQPDWSK--LNL 426
Query: 494 YSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIE-TKIRNIRFIGELCKFKIAP 552
Y+R VAT S +KDV LI+ L+ F + Q++ ++NI F E+ KF + P
Sbjct: 427 YARFVATNSNQLKDVKDDLIEYLDNGF------RSQLHTNRINVKNIIFFCEMVKFSLVP 480
Query: 553 AGLVFSCLKA-CLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKN 611
A L+F ++ L+ +NI++ L E GRFL PE + +M M+E++ K
Sbjct: 481 AFLIFHKIRTLILNLLVPNNIEILILLFENFGRFLTNKPEFNPQMEKMIELIKENKKDHR 540
Query: 612 LDPRHVTLVENAYYLCKPPERSARVSKVRPPL--HQYIRKLLFSDLDKSSIEHVLRQLRK 669
+ ++N L PP S+ +V ++ R L+ +L + + L+K
Sbjct: 541 ISITGKNALDNLLTLIYPPNLSSLNLEVTKSTTEQRFYRVLIRKELFNIGFKKASKLLKK 600
Query: 670 LPWSDCESY--LLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGL 727
WSD Y +L F K K Y + ++A A + Y+ +F + +D +LE I+ L
Sbjct: 601 ANWSDAGVYKTMLSLFTKPEKVSYQSLPILAQCLAAIYPYYRDFVIICIDTILEGIQRSL 660
Query: 728 ELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
E+N Y +R+A +L +YN V S VI DT+Y IL FG+
Sbjct: 661 EVNSYSYNMKRIAQATYLVCIYNNSMVRSEVILDTMYQILRFGY 704
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/302 (20%), Positives = 124/302 (41%), Gaps = 36/302 (11%)
Query: 57 LVYFLKICSLLHQRYKD-FSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLE 115
++ +++ S LHQR+ + F+ LI+G L F D D + + + +S ++ E
Sbjct: 93 IIAAVEVVSGLHQRFGEKFTIRLIEGFLLNFVDPTRESDSDKEELARTNRLKSNFRIFTE 152
Query: 116 LYFIGIIED-----------------SSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFA 158
LY + + + S + + I+K + S R + L++ FA
Sbjct: 153 LYLVNVFRNFEYASKDNLPTFALKTTSPMLVVILKTILSY-----RYRSGFRLSVATLFA 207
Query: 159 RQGRIFLGLPLSGPGQEIYEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQ 218
++ F ++EF ++ + +FK + EL + L +
Sbjct: 208 KKYPAFFD-----KDDTSFDEFIDNDSLKDQLQSLFKIITDGVFKRTVEL----NRKLSK 258
Query: 219 MENENAKILNAKGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRV 278
+ E+ + G+L +E YE L+ ++ SL E+ + + P + E
Sbjct: 259 LNKEHQRAQIRTGKLVDEYLQEYEDLKPVFERFKAAAISLGESFNCEHPALEESDDGN-- 316
Query: 279 TSGEDASPASGKDSSVPEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPL 338
S E+ S + ++ E +W+ EE + YE LP + +PA +++ + +PL
Sbjct: 317 NSLENKSIITNQNKVALEKLWESEEAKKLYEVLPVIS--LPASPDNSYTNESEQVKSEPL 374
Query: 339 EQ 340
+Q
Sbjct: 375 KQ 376
>gi|47169313|pdb|1UW4|B Chain B, The Structural Basis Of The Interaction Between Nonsense
Mediated Decay Factors Upf2 And Upf3
gi|47169315|pdb|1UW4|D Chain D, The Structural Basis Of The Interaction Between Nonsense
Mediated Decay Factors Upf2 And Upf3
Length = 248
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 69/133 (51%), Positives = 91/133 (68%), Gaps = 2/133 (1%)
Query: 640 RPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLI 697
RPPL +Y+RKLL+ DL K + E VLRQ+RKLPW D E Y++ C + + KY IH +
Sbjct: 1 RPPLQEYVRKLLYKDLSKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCV 60
Query: 698 ASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSS 757
A+L AGL Y ++ + VVD VLE+IRLG+E+N QRR++ +FLGELYNY V+S+
Sbjct: 61 ANLLAGLVLYQEDVGIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESA 120
Query: 758 VIFDTLYLILVFG 770
VIF TLY FG
Sbjct: 121 VIFRTLYSFTSFG 133
>gi|150864129|ref|XP_001382835.2| protein involved in decay of mRNA containing nonsense codons
[Scheffersomyces stipitis CBS 6054]
gi|149385385|gb|ABN64806.2| protein involved in decay of mRNA containing nonsense codons
[Scheffersomyces stipitis CBS 6054]
Length = 1028
Score = 143 bits (360), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 130/484 (26%), Positives = 231/484 (47%), Gaps = 35/484 (7%)
Query: 304 TRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTAE-VS 362
T+A + DL A+ + KA + K L++ T +E + + AE +
Sbjct: 244 TKAVFSIQVDLNR--QAISVASRNKKAAIRTGKILDEHTSELNEVSELLEKFKSAAEFLG 301
Query: 363 ADLGASP-----EGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKG 417
+G +P E S E K+K+ + D+ G D EK+ K P E+
Sbjct: 302 GVVGMTPPKLFTENSSQVSESSTVEVVKQKSLNEDELGGIWDDIREKNF-YTKIPTLEEL 360
Query: 418 KEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEF--CYLNSKSNRKR 475
+E+ ++ T K+ G ++ L +L V + +DQL V+F +LN+K+ R R
Sbjct: 361 QEQYPPTEINTTKD------GEKIEYFLSKLEN-VPQSNVDQLVVDFNDLHLNNKATRNR 413
Query: 476 LVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETK 535
+++ L P S L YY R + + + D+ LI+ L++ F I +++N
Sbjct: 414 ILKFLIETPEISN--LKYYCRFLKVNESNLSDLIHELIEFLDKGFRSQI-YHNKLNF--- 467
Query: 536 IRNIRFIGELCKFKIAPAGLVFSCLKA-CLDDFTHHNIDVACNLLETCGRFLYRSPETSI 594
+NI F EL KFK+ P ++F ++ L+ + +NID+ E GRFL E
Sbjct: 468 -KNIYFFVELIKFKMIPTHIIFHKIRTLTLNITSSNNIDILSVFYEHAGRFLLNETEYRE 526
Query: 595 RMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPP----LHQYIRKL 650
M +M+ +L K +NL + N + PP +V+ ++ P + QYIR+L
Sbjct: 527 LMLSMISLLKEKKKAQNLTIDEKMAIRNLLVVIDPP--ITKVNNLQQPKFTVVQQYIRRL 584
Query: 651 LFSDLDKSSIEHVLRQLRKLPW-SDCESY--LLKCFMKVHKGKYGQIHLIASLTAGLSRY 707
+ +L + V +LR++ + +D ++Y L+ C Y I +A + +S+
Sbjct: 585 IQVELTNKTASQVSVELRRVDYRADKDNYFVLIDCLSSPEDLNYDNIPSLAEILEKMSKK 644
Query: 708 HDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLIL 767
+ VD ++E+I GLE NDY + + R+AH++++ +++NY+ V+ I D LY I+
Sbjct: 645 NKHVLARTVDTIIEKIIRGLEENDYRLNRVRMAHIKYISDIFNYKLVNFKFIRDLLYKIV 704
Query: 768 VFGH 771
+GH
Sbjct: 705 TYGH 708
>gi|349805077|gb|AEQ18011.1| hypothetical protein [Hymenochirus curtipes]
Length = 241
Score = 142 bits (358), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 69/138 (50%), Positives = 93/138 (67%), Gaps = 5/138 (3%)
Query: 524 INKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCG 583
+NKKDQ+NIETK + +RFIGEL KFK+ +CLK L DF+HH+I++AC LLETCG
Sbjct: 98 VNKKDQINIETKNKTVRFIGELAKFKMFSKTDTLNCLKMLLSDFSHHHIEMACTLLETCG 157
Query: 584 RFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPP-----ERSARVSK 638
RFL+RSP++ +R +LE +MR K +LD R+VT+VENAYY C PP S
Sbjct: 158 RFLFRSPDSHLRTGVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTNSDGSPSL 217
Query: 639 VRPPLHQYIRKLLFSDLD 656
+ PP H + +L+ + LD
Sbjct: 218 LDPPEHLFRIRLVCTILD 235
>gi|344303221|gb|EGW33495.1| hypothetical protein SPAPADRAFT_71334 [Spathaspora passalidarum
NRRL Y-27907]
Length = 1031
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/344 (30%), Positives = 172/344 (50%), Gaps = 18/344 (5%)
Query: 437 EGTNLDALLQRLPGCVSRDLIDQLTVEF--CYLNSKSNRKRLVRALFNVPRTSLELLPYY 494
+G + L RL + DL +QL VEF LN+K+ + R++R F + +++ L YY
Sbjct: 377 DGERIQDFLNRLEDVGANDL-EQLVVEFNNLNLNNKATKNRIMR--FFIETSNVSNLKYY 433
Query: 495 SRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAG 554
+R + + D+ LI L++ F + ++++N +NI F EL KFK+ P
Sbjct: 434 ARFLKINEINLSDLIEELITYLDKGFRHQL-YQNKLNF----KNILFFVELIKFKMVPIH 488
Query: 555 LVFSCLKA-CLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLD 613
L+F ++ L+ +NID+ E GRFL PE M M+E+L NL
Sbjct: 489 LIFHKIRTLTLNISATNNIDILAVFYENVGRFLMNEPEYKDLMVEMIELLKEKSKKSNLK 548
Query: 614 PRHVTLVENAYYLCKPPERSARVSKVRPPL---HQYIRKLLFSDLDKSSIEHVLRQLRKL 670
+ N + PP + +V + + L Q+I++L+ +LD S+ ++R L KL
Sbjct: 549 INDKLAINNLLLIVNPPA-NTKVQREKSTLSLKQQFIQRLIRVELDAKSVPVIIRLLNKL 607
Query: 671 P-WSDCES--YLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGL 727
+D ES +L CF Y + +A + S+ H + V +D ++E I GL
Sbjct: 608 HIQTDEESCDTVLDCFAHPELVNYDNLPALAEVLQMYSKNHKKIVVYTIDTLIENIIRGL 667
Query: 728 ELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
ELNDY M + R++ ++ + ELYN + V ++ D LY IL GH
Sbjct: 668 ELNDYRMNRVRMSQIKLVAELYNKKIVQFKLLNDLLYRILCSGH 711
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 114/284 (40%), Gaps = 50/284 (17%)
Query: 61 LKICSLLHQRYKD-FSP-CLIDGLLKVFFPGKSGE-DLD-ADRNLKAMKKRSTLKLLLEL 116
++I S HQR+ F+P LI L+ + P +S + D+D + + +++R+ L+L+ E
Sbjct: 95 IEIVSAFHQRFTTLFTPQLLIHVLVGISNPVRSHQSDIDEKEEQSRIVRQRNLLRLVGEF 154
Query: 117 YFIGIIEDSSIFINIIKDLT--SIEHLKDRDTTQTNLTLLASFARQG---------RIFL 165
Y IG+ ++KD SI H LL F +Q + +
Sbjct: 155 YIIGVFR-------VLKDCNKDSIPH-----------ELLLKFGKQASEPILIVVIKDLM 196
Query: 166 GLPL-SGPGQEIYEEFFKGLN----------ITADQKKIFKKAFHTYYNAVQELLQAEHT 214
L SG + + F K ++ + + + + F Y AV ++
Sbjct: 197 NFELKSGNSLSVIQSFLKRFQNIICNDDNVLLSFEVRNVLVQIFSIYSKAVFDITVDLKK 256
Query: 215 SLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVH 274
++Q+ N K G + EE + ++ Y+ L++ LD+ P D
Sbjct: 257 RVKQLTERNNKASIRTGRILEEIQVELDDVKSRYEKFKSTAEFLSDTLDIPPLNWNLDEE 316
Query: 275 TTRVTSGEDASPASGKDSSVPEP----VWDDEETRAFYECLPDL 314
T+ D+ K S+ E VW+D + + FY +P L
Sbjct: 317 DTK--QEPDSVVELVKSKSLNEDDLNGVWEDIKEKTFYTVIPSL 358
>gi|302851744|ref|XP_002957395.1| hypothetical protein VOLCADRAFT_68153 [Volvox carteri f.
nagariensis]
gi|300257354|gb|EFJ41604.1| hypothetical protein VOLCADRAFT_68153 [Volvox carteri f.
nagariensis]
Length = 271
Score = 139 bits (351), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 67/136 (49%), Positives = 96/136 (70%)
Query: 640 RPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCESYLLKCFMKVHKGKYGQIHLIAS 699
R LH+YIR L+F L +++I VLR+L KLPW+ E Y++KC +KV ++ I L++
Sbjct: 1 RSALHEYIRHLIFEVLSEATIPLVLRKLLKLPWALYEKYVVKCLLKVGICRFSNIPLVSC 60
Query: 700 LTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVI 759
L AGL++YHD VA+VD VLE++R GLE GM Q+R+A +R LGELYNY +S+ +
Sbjct: 61 LAAGLAQYHDSCGVALVDCVLEDVRCGLENPGAGMYQKRMADVRLLGELYNYMLCNSTPV 120
Query: 760 FDTLYLILVFGHGTAE 775
F+TLYL++ FGH + E
Sbjct: 121 FETLYLLVTFGHESPE 136
>gi|367014439|ref|XP_003681719.1| hypothetical protein TDEL_0E02650 [Torulaspora delbrueckii]
gi|359749380|emb|CCE92508.1| hypothetical protein TDEL_0E02650 [Torulaspora delbrueckii]
Length = 1038
Score = 139 bits (350), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 175/356 (49%), Gaps = 17/356 (4%)
Query: 431 EKLKGVEGTNLDAL---LQRLPGCVSRDLIDQLTVEF--CYLNSKSNRKRLVRALFNVPR 485
E L+ N DA+ L G ++ +ID L+V++ L++K+ RKRL++ L
Sbjct: 361 ESLRNTTEANGDAINRFFASLEGAETKAMIDSLSVQYWATNLDNKATRKRLLKFLIETQD 420
Query: 486 TSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGEL 545
S + ++R +AT + + +V I L+ F ++ +++N+ +NI F E+
Sbjct: 421 WSK--IRIFARYLATNAKYLPEVIEEFITYLDHGFRSQLHS-NRINV----KNIIFFSEM 473
Query: 546 CKFKIAPAGLVFSCLKACLDDF-THHNIDVACNLLETCGRFLYRSPETSIRMANMLEILM 604
KF + P ++F ++ + + +NI++ E G FL PE M M+E++
Sbjct: 474 VKFMLLPTYMIFHKIRTLIINLQVPNNIEILTVFFEHLGIFLINKPEYKQHMEKMVELIK 533
Query: 605 RLKNVKNLDPRHVTLVENAYYLCKPPE-RSARV-SKVRPPLHQYIRKLLFSDLDKSSIEH 662
K + L+ ++N L PP RS +K+ ++ R L+ +L +H
Sbjct: 534 ENKKDRQLNINLKGALDNLINLVYPPSIRSLNADAKILTSEQKFYRVLIRRELGNFEHKH 593
Query: 663 VLRQLRKLPWSDCESYLLKC--FMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVL 720
V++ LRK W D Y + C K + Y I L+A + L Y F + +DEV+
Sbjct: 594 VIKLLRKANWKDPNVYNMLCELLTKPEEISYQNIPLMARVVKELYAYQRNFVIKCIDEVI 653
Query: 721 EEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHGTAET 776
E I GLE++DY +R++ +R+L ELYN E + V+ D+L+ I+ FGH T
Sbjct: 654 ENIDRGLEISDYSKNMQRISEVRYLTELYNCELIKPVVLIDSLFKIMSFGHARVGT 709
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 55/267 (20%), Positives = 107/267 (40%), Gaps = 18/267 (6%)
Query: 61 LKICSLLHQRYK-DFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFI 119
+++ S LHQR+ F+ + + L F +D + K+ K + L++L ELY +
Sbjct: 94 VEVVSGLHQRFNARFTCGVFELYLNNFTTSADDSTVDKEGLAKSTKLKGNLRVLTELYLV 153
Query: 120 GIIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLA----SFARQGRIFLGLPLSGPGQE 175
GI ++ + ++ R + LL + + ++ ++ +
Sbjct: 154 GIFTS----LDKVSSKEALPSFLQRRVNKKEPLLLPILKETLNYKFKLGFSTAIATSFVK 209
Query: 176 IYEEFF----KGLNI---TADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILN 228
+ FF LN+ D K + F + AV ++ ++++ E+ K
Sbjct: 210 RFPFFFDNEDTSLNVCIFDNDLKGSLQALFKVFTEAVFARALELYSKVKKLYKEHQKCQF 269
Query: 229 AKGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPAS 288
G+ ++E Y Y+ +LAE + P + R SP
Sbjct: 270 RTGKSTDEYIEEYNFCLPIYESFKTASENLAEFFQLNLPAFGTE-SDARNEETSSYSPVI 328
Query: 289 GKDSSVP-EPVWDDEETRAFYECLPDL 314
++P + VW++EETR FYE LP++
Sbjct: 329 TNTMALPGQRVWENEETRKFYEILPNI 355
>gi|50291485|ref|XP_448175.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527486|emb|CAG61126.1| unnamed protein product [Candida glabrata]
Length = 1081
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 163/342 (47%), Gaps = 14/342 (4%)
Query: 441 LDALLQRLPGCVSRDLIDQLTVEF--CYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMV 498
L++ L S+ +D L ++ LN+K+ R R+++ F + + Y+R
Sbjct: 372 LNSFFTELQNIESKGHLDDLVRKYWSLNLNNKATRNRIIK--FFIETVDWSKISLYARFF 429
Query: 499 ATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFS 558
A + MK+ IQ L+ F + N + I+N+ F GE+ KF + P +VF
Sbjct: 430 AINAPYMKETVDEFIQYLDNGF-----RSQLHNTKFNIKNVIFFGEMVKFSLIPQFMVFH 484
Query: 559 CLKACLDDFT-HHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHV 617
++ + + +N+++ L E CG+FL E M +++ L + +L+
Sbjct: 485 KIRTLIINMNITNNVEILTILFENCGKFLLNKAEYKDEMDKLVDRLKSRRTDHSLNMNTK 544
Query: 618 TLVENAYYLCKPPERSARVSKVR--PPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSD- 674
+E + PP + ++V P + LL S+L + +R +RK W D
Sbjct: 545 ASIEMLLRILFPPSTKSLNTEVVQLTPEENFYTVLLRSELGNIGFKDTVRLIRKAHWKDP 604
Query: 675 -CESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYG 733
E F + K Y I ++ + +GL ++ FA+ +D+VLE I GLE N Y
Sbjct: 605 NTEKLFFTLFTEPEKVSYQNIPILTQVLSGLYSFNRNFAIMCIDQVLENIENGLESNTYA 664
Query: 734 MQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHGTAE 775
R+A++R+L E++NYE + S+V+ DT++ I+ +GH +
Sbjct: 665 ENTSRIANIRYLVEIFNYEMMKSNVLMDTMHHIVKYGHPNGQ 706
>gi|254581820|ref|XP_002496895.1| ZYRO0D10582p [Zygosaccharomyces rouxii]
gi|238939787|emb|CAR27962.1| ZYRO0D10582p [Zygosaccharomyces rouxii]
Length = 1039
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 181/385 (47%), Gaps = 23/385 (5%)
Query: 438 GTNLDALLQRLPGCVSRDLIDQLTVEFCY--LNSKSNRKRLVRALFNVPRTSLELLPYYS 495
G ++ + L +++ ID L+V + L++K+ RKRL++ F + L YS
Sbjct: 370 GDKVNNFFRELEEADTKEAIDHLSVLYWSENLDNKATRKRLMK--FFIENKDWSKLRLYS 427
Query: 496 RMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGL 555
R AT S ++ + ++ F ++ + ++NI F E+ KF P L
Sbjct: 428 RFFATNSKYFHELIEEFVNYVDSGFRSQLHSS-----KINVKNIIFFSEMVKFMQLPIYL 482
Query: 556 VFSCLKACLDDF-THHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDP 614
+F ++ + + +NI++ L E G FL PE M M+ +L K + L
Sbjct: 483 IFHKIRTLIINLHVPNNIEILTVLFEHLGIFLINKPEYKAHMEKMMALLKEKKRDRQLSI 542
Query: 615 RHVTLVENAYYLCKPPE-RSARVS-KVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPW 672
++N L PP +S S K P Q+ L+ +L + V++ LR+ W
Sbjct: 543 NLKGAMDNLITLVYPPSIKSLNASTKELSPEQQFYHILIRRELQSFEVGRVVKLLRRAHW 602
Query: 673 SD--CESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELN 730
D L F++ + Y I ++A + + L +Y F + +DE+LE++ GLE+N
Sbjct: 603 KDETVRDTLFDLFVRPEELSYQNISIMAKVLSELYKYQRNFVITCIDELLEKVERGLEIN 662
Query: 731 DYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHGTAETY-WTHQKIVSGSGW 789
D+ R+A +R+L ELY++ + +V+ DT+YLIL +GH +Y ++ I +
Sbjct: 663 DFTHSMHRVAEVRYLTELYSFALIKPNVLLDTMYLILKYGHNGKGSYLFSPNDIDEADNY 722
Query: 790 --------LLLFLRLVVTTLTEALP 806
+LL LR + L++ LP
Sbjct: 723 FKIQLLSTMLLNLRRNTSMLSKKLP 747
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 55/268 (20%), Positives = 108/268 (40%), Gaps = 21/268 (7%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDL-DADRNLKAMKKRSTLKLLLELYFI 119
+++ S LHQR+ C + L F + + + + + + K R+ +++ ELY +
Sbjct: 94 VEVISGLHQRFNTRFTCELMALFLNHFACPQEDSISEKEASTRVSKMRTNVRIFTELYLV 153
Query: 120 GIIEDSSIFINIIKDLTSIEHLKD--RDTTQTNLTLLASFARQGRIF-LGLPLSGPGQEI 176
GI N + ++TS + L R ++L S ++ F S +
Sbjct: 154 GIF-------NSLDNVTSKDALPVFLRKRLAKKESVLVSILKEVLSFNFNDGFSSSIATL 206
Query: 177 YEEFFKGL---NITADQ---KKIFKKAFHTYYNAVQELLQAEHTSL----RQMENENAKI 226
+ + F L N AD+ K K + E++ A L +++ E+ K
Sbjct: 207 FVKKFPQLFEENNLADKYIHDKDLKYLLQGIFKKFTEVVSARAVQLNKRTKKLIKEHQKC 266
Query: 227 LNAKGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASP 286
G+ +++ Y Y+ L E + PP + E+V + + +
Sbjct: 267 QIRTGKETDDFLEEYNATLPQYEKFKSAALVLTEFFKLDPPELNEEVEAQEDEAAKPSVI 326
Query: 287 ASGKDSSVPEPVWDDEETRAFYECLPDL 314
+ S + VW+++E R FYE LP++
Sbjct: 327 TNATGVSPSQKVWENDEVRKFYEALPNI 354
>gi|294657894|ref|XP_460195.2| DEHA2E20548p [Debaryomyces hansenii CBS767]
gi|199433029|emb|CAG88468.2| DEHA2E20548p [Debaryomyces hansenii CBS767]
Length = 1012
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 166/344 (48%), Gaps = 17/344 (4%)
Query: 438 GTNLDALLQRLPGCVSRDLIDQLTVEFCYL--NSKSNRKRLVRALFNVPRTSLELLPYYS 495
G ++ + +L + ID L EF L N+K+ R R+++ P ++ L +YS
Sbjct: 372 GEKINEFITKLEKVSNEQEIDALVSEFINLELNNKATRNRIMKFFIETP--NINNLRFYS 429
Query: 496 RMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGL 555
R + + +K + LI L++ F + N + +NI F EL KFK+ P +
Sbjct: 430 RFLKINESSLKTLIDELITYLDKGF-----RSQIYNNKLNFKNIFFFCELIKFKLIPTHV 484
Query: 556 VFSCLKACLDDFTH-HNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDP 614
+F +++ + + +NID+ E CGRFL P+ M M+E+L + L
Sbjct: 485 IFHKIRSLTVNISSTNNIDILSVFYEQCGRFLLNDPDYKALMNEMIELLKQKSKNDKLTA 544
Query: 615 RHVTLVENAYYLCKPPE-RSARVSKVRP---PLHQYIRKLLFSDLDKSSIEHVLRQLRKL 670
+ N + PP + ++ +P P Q+I +L +L+ + V+R L+K
Sbjct: 545 NDKLAINNLLIVVIPPTTKINQLHNEKPKLTPQQQFIIRLSRYELNSKTFTLVMRSLKKF 604
Query: 671 PW---SDCESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGL 727
+ + ++ LL F Y I ++ L LS+ + + VD ++E+I GL
Sbjct: 605 DYVNDEELQTALLDVFASPDLLNYENIVELSKLLEQLSKKYKSLLIKTVDTIVEKIMRGL 664
Query: 728 ELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
ELNDY + + R++H++F+ ELYN + ++ I D LY IL GH
Sbjct: 665 ELNDYRLNRTRISHVKFISELYNLKLLNFKFIIDLLYKILCLGH 708
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 127/287 (44%), Gaps = 58/287 (20%)
Query: 61 LKICSLLHQRYK-DFSPCL----IDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLE 115
++I S LHQR+ F+P L ++GL + ++ + + L+ ++++ +KLL+E
Sbjct: 94 MEIVSALHQRFSTSFTPYLFANFLNGLASPIRQPVNEQEKEKEDQLRIARQKNLIKLLME 153
Query: 116 LYFIGII----------------------EDSSIFINIIKDLTSIEHLKDRDTTQTNLTL 153
Y IGI ++ I I ++KD+ + E +K ++ +
Sbjct: 154 FYLIGIFRTVKDCDRENLPDFIIKKYSKAQNEPIVILVLKDILNFE-IKSGNSLPISQVF 212
Query: 154 LASFARQGRIFLGLPLSGPGQEIYEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEH 213
L F+ +Y+ + ++ + + I ++ F Y +A+ E+L +
Sbjct: 213 LKRFS---------------HVVYDN--ENCLLSFETRNILQQIFKIYTSAILEILVQLN 255
Query: 214 TSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYRNVSS-LAEALDMQPPVMPED 272
T L ++ N K G++ EEN + + +D +RN S L L+M P +P +
Sbjct: 256 TKLGKLAERNKKASIRTGKILEENITDINHVTSLFDK-FRNASEFLCGILNMDVPELPNN 314
Query: 273 VHTTRVTSGEDASPASG--KDSSVPE---PVWDDEETRAFYECLPDL 314
E+ S +G K+ S+ E +WD+ + R FY +PD+
Sbjct: 315 ------QPEEEESVVTGLVKNKSLNEDDLEIWDNIKERNFYTKIPDI 355
>gi|50307341|ref|XP_453649.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642783|emb|CAH00745.1| KLLA0D13156p [Kluyveromyces lactis]
Length = 1095
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 172/340 (50%), Gaps = 14/340 (4%)
Query: 443 ALLQRLPGCVSRDLIDQLTVEFCY--LNSKSNRKRLVRALFNVPRTSLELLPYYSRMVAT 500
AL ++D ID+++ + L++K+ RKRL++ F V + Y+R +A
Sbjct: 373 ALFADFETVETKDEIDEISRRYWLQNLDNKATRKRLMK--FFVECKDWSKISLYARFMAN 430
Query: 501 LSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCL 560
+ +V LIQ L+ F ++ +++NI +NI F E+ KF + P+ ++F +
Sbjct: 431 NENYLSEVKEELIQYLDSGFRSQLHS-NKINI----KNIIFFAEMVKFMLIPSFMIFHKI 485
Query: 561 KACLDDFT-HHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTL 619
+ + T +NI++ L E+ G+FL +PE +M M+ ++ K L +
Sbjct: 486 RTLAMNITVPNNIEILSTLFESFGKFLINTPEFKPQMEKMMVLIKEKKKDHLLTVNNKAA 545
Query: 620 VENAYYLCKPPERSARVSKVR--PPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSD--C 675
++N L PP+ + + R P + L+ +LD S+ L+ + K W+D
Sbjct: 546 LDNLIILIYPPQLNVLNQEKRDLSPEQLFFITLIRRELDNVSLNSALKLILKASWNDPNV 605
Query: 676 ESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQ 735
E LL F K K Y + +A++ L +++ F + VD +LE+I++GLE +Y +
Sbjct: 606 EKTLLSLFSKPEKVSYQSLPKLANILTYLFKHYKSFTIKTVDTLLEKIQVGLESGEYSLN 665
Query: 736 QRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHGTAE 775
R++ +++L ELYN + V+ DT+Y IL FG+ + +
Sbjct: 666 MARVSQVKYLTELYNTSFLKFEVLLDTMYRILRFGYPSGQ 705
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 133/307 (43%), Gaps = 45/307 (14%)
Query: 37 KYIANIYIYTYTLLL---GLWLTLVYFLKICSLLHQRYK-DFSPCLIDGLLKVFFPGKSG 92
KY++ I T L G +V ++I S LHQR+ DF+ LI+ L +F
Sbjct: 67 KYLSEIITTTNEALFKNSGKGDDIVAVVEIVSGLHQRFNMDFTLPLIESFLFIFETSSDE 126
Query: 93 EDLDADRNLKAMKKRSTLKLLLELYFIGII---------------------EDSSIFINI 131
+ + D+ + ++ ++L+EL+ G++ ++ +FI +
Sbjct: 127 AETEKDKTTRTNVLKACTRVLIELHLTGVLPSLDDLNKSKLPPFVVKRYSKKEPIVFI-V 185
Query: 132 IKDLTSIEHLKDRDTTQTNLTLLASFARQGRIFLGLPLSGPGQEIYEEFFKGLNITADQK 191
++++ + + K+ TT + +L + L +S I E K L
Sbjct: 186 LREVLNYK-FKEALTTPVAILILKKYPE----LLSEEVSDMDNLINSEELKTL------- 233
Query: 192 KIFKKAFHTYYNAV-QELLQAEHTSLRQM-ENENAKILNAKGELSEENSSSYEKLRKSYD 249
+ F Y + V Q+ ++ +++ M E+ A+I G+ S E + +L ++
Sbjct: 234 --LRSLFKIYKDIVFQQTVELNKKTIKLMKEHHKAQI--RTGKESSEYLDDFNELNPIFE 289
Query: 250 HLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASGKDSSVPEPVWDDEETRAFYE 309
++LAEA ++ PP + + + + +PAS EP+W++EE R FYE
Sbjct: 290 KFSTVATALAEAFNVDPPELLDIEQSLKEQEPSIITPASDWKEK-QEPIWENEENRRFYE 348
Query: 310 CLPDLRA 316
L DL A
Sbjct: 349 NLADLSA 355
>gi|21755619|dbj|BAC04721.1| unnamed protein product [Homo sapiens]
Length = 579
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 130/421 (30%), Positives = 197/421 (46%), Gaps = 65/421 (15%)
Query: 63 ICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIGII 122
+CSL HQRY DF+P L+ K F K ++ K R+ L+ + EL +GI
Sbjct: 195 LCSLFHQRYADFAPSLLQVWKKHFEARKE------EKTPNITKLRTDLRFIAELTIVGIF 248
Query: 123 EDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGL------------PL 169
D I + L +I + DR++ T+++++ SF R G GL L
Sbjct: 249 TDKEGLSLIYEQLKNIINA-DRES-HTHVSVVISFCRHCGDDIAGLVPRKVKSAAEKFNL 306
Query: 170 SGPGQEIYEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNA 229
S P EI I+ ++++ F+ Y+ ++ + L+ +H L+ E +N +IL++
Sbjct: 307 SLPPSEI---------ISPEKQQPFQNLLKEYFTSLTKHLKRDHRELQNTERQNRRILHS 357
Query: 230 KGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTS-GEDA-SPA 287
KGELSE+ YE+ SY L N SLA+ LD P +P+D T G D +P
Sbjct: 358 KGELSEDRHKQYEEFAMSYQKLLANSQSLADLLDENMPDLPQDKPTPEEHGPGIDIFTPG 417
Query: 288 SGKDSSVPEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASE 347
+ + +W+DE+ R FYE L DL+AFVPA+L K NE S + E D
Sbjct: 418 KPGEYDLEGGIWEDEDARNFYENLIDLKAFVPAILF-----KDNEKSCQNKESNKD---- 468
Query: 348 PDQGQLAAQDTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKE 407
DT E S E K V D E + + + D + +G D
Sbjct: 469 ---------DTKEAK----ESKENKEVSSPDDLELELENLEINDDTLELEGGD------- 508
Query: 408 KAKDPDKEKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYL 467
+A+D K+ E++ E + + LK + +DA LQ+LP CV+RDLID+ FC
Sbjct: 509 EAEDLTKKLLDEQEQEDEEASTGSHLKLI----VDAFLQQLPNCVNRDLIDKAEKAFCNG 564
Query: 468 N 468
N
Sbjct: 565 N 565
>gi|410079350|ref|XP_003957256.1| hypothetical protein KAFR_0D04740 [Kazachstania africana CBS 2517]
gi|372463841|emb|CCF58121.1| hypothetical protein KAFR_0D04740 [Kazachstania africana CBS 2517]
Length = 1041
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 162/326 (49%), Gaps = 16/326 (4%)
Query: 453 SRDLIDQLTVEFC--YLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSS 510
+++ ID+LTV + +L++K+ R RL++ F + + YSR VA+ S + +VS
Sbjct: 385 TKESIDELTVSYWRNHLDNKATRNRLLK--FFIETQEWSKIRIYSRFVASNSQYLPEVSE 442
Query: 511 MLIQMLEEEFNFLINKKDQMNI-ETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDF-T 568
LI+ L+ F ++Q++ + ++NI F E+ KF P ++F ++ + +
Sbjct: 443 ELIKYLDNGF------RNQLHSNKINVKNIIFFSEMIKFMQVPIFMIFHKIRTLIMNLHV 496
Query: 569 HHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCK 628
+NI++ E CG+FL PE +M M+++L + L+ + ++N L
Sbjct: 497 PNNIEILTIFFEHCGKFLLNKPELQPQMEKMVDLLRTKMRDRQLNMSLKSALDNLLTLLF 556
Query: 629 PPERSARVSKVR--PPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCESY--LLKCFM 684
PP + + R P ++ L+ S+L + +RK W D Y L F
Sbjct: 557 PPSIKSLNLEGRKLTPEEEFYTVLIRSELSNVDYRRAVNLIRKANWKDGNVYNTLFALFT 616
Query: 685 KVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRF 744
+ K Y I +++ L GL Y F + +D+VLE I GLE N Y R+A++R+
Sbjct: 617 EPEKVNYQNISILSKLLNGLYAYQRNFVIKTIDQVLENIERGLETNVYSENMSRIANVRY 676
Query: 745 LGELYNYEHVDSSVIFDTLYLILVFG 770
L E++N E + ++V D + I+ FG
Sbjct: 677 LTEIFNMEMIKATVFLDVINNIIRFG 702
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 110/276 (39%), Gaps = 31/276 (11%)
Query: 61 LKICSLLHQRYK-DFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFI 119
+++ S +HQR+ F+P L L F +++ + + K L++ ELY +
Sbjct: 94 IEVISAMHQRFSTSFTPKLFQLFLGNFENPADSANIEKNEITRLNKLNGNLRIFTELYLV 153
Query: 120 GI-------IEDSSIFINIIKDLTSIEHL-----KDRDTTQTNL----TLLASFARQGRI 163
I + ++ + + K L E L K+ + NL T+ SF ++
Sbjct: 154 NIFTTLDDVVSKDALPLFLQKGLNKKESLLFSILKEVLNFKFNLGYTTTVGTSFVKRFPF 213
Query: 164 FLGLPLSGPGQEIYEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENEN 223
F +++F + + +FK + AV + + ++ E+
Sbjct: 214 FFD-----KDDTTWDKFISDETVRPSLQALFK----VFTEAVSGKAVELNKKINKLMKEH 264
Query: 224 AKILNAKGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGED 283
K G+L +E ++ L ++ + L EAL+M P ++ + E
Sbjct: 265 QKCQIRTGKLVDEYIEEHDTLMPIFERFKSAIEILGEALNMNVPKFKDE----KPIEDEA 320
Query: 284 ASPASGKDSSVP-EPVWDDEETRAFYECLPDLRAFV 318
P P E +W+++ETR FYE LPD+ V
Sbjct: 321 IVPMIINQVLPPNERLWENDETRRFYENLPDIADLV 356
>gi|448513238|ref|XP_003866902.1| Nmd2 protein [Candida orthopsilosis Co 90-125]
gi|380351240|emb|CCG21464.1| Nmd2 protein [Candida orthopsilosis Co 90-125]
Length = 1062
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/344 (28%), Positives = 171/344 (49%), Gaps = 17/344 (4%)
Query: 437 EGTNLDALLQRLPGCVSRDLIDQLTVEF--CYLNSKSNRKRLVRALFNVPRTSLELLPYY 494
+G + L RL +L +QL VEF LN+K+ + R++R F + ++L L YY
Sbjct: 376 DGEKIQEFLDRLEDVRGNNL-EQLVVEFNNLNLNNKATKNRIMR--FFIETSTLNNLKYY 432
Query: 495 SRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAG 554
+R + + ++ LI L++ F I++ +++N+ +NI F EL KFK+ P
Sbjct: 433 TRFLKINELNLSELIEELITYLDKGFRSQIHR-NKLNV----KNILFFVELIKFKMVPKH 487
Query: 555 LVFSCLKA-CLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLD 613
+VF +++ L+ + +NI++ E GRFL E+ M M+++L NL+
Sbjct: 488 VVFHKIRSLTLNVTSTNNIEILTVFYEHVGRFLLHDAESKDLMREMIDLLREKSKQSNLN 547
Query: 614 PRHVTLVENAYYLCKPPERSARVSKVRPPL---HQYIRKLLFSDLDKSSIEHVLRQLRKL 670
+ N +PP + + P L +I+K+L +L+ + V++ R
Sbjct: 548 VNDKLAINNLLITVEPPVTKVQTLREAPKLSTKQMFIQKILREELNSDTRSLVVKHFRAK 607
Query: 671 --PWSDCESY-LLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGL 727
E Y L+ CF K + Y I +A + + + V VD ++E+I GL
Sbjct: 608 FGQLGQAEYYTLVDCFSKPNLINYDNIPALAKVLSAFGEKYKSLVVLSVDTIVEDIIRGL 667
Query: 728 ELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
ELND+ M + R+A +++L ELYN ++ ++ D LY IL +GH
Sbjct: 668 ELNDFRMNRTRMAQVKYLAELYNSRVINFKLLNDMLYRILCYGH 711
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 118/273 (43%), Gaps = 19/273 (6%)
Query: 61 LKICSLLHQRY-KDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFI 119
+++ S LHQR+ K F+ L++G+L E D + + + ++++ L+L+ E Y +
Sbjct: 95 VEVISALHQRFGKQFTGDLLNGILVNIVNPSKAELADKEESSRLSRQKNLLRLVGEFYIV 154
Query: 120 GIIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQGRIFLGLPLSGPGQEIYEE 179
GI++ ++ F++++ D+ + L LL + I SG + +
Sbjct: 155 GILQTAADFLDVLDSKVIKSFALDKRRNEPILILLLKYLLNFEI-----ESGRSLNMVQS 209
Query: 180 FFKGLN---------ITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAK 230
F K + + +D + + K+ F Y AV ++ + +++ N K
Sbjct: 210 FLKRFSHIIFSDSELLPSDSRHVLKQIFLIYTEAVFNIMMKIKKQVHKLDVRNKKAAIRT 269
Query: 231 GELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRV---TSGEDASPA 287
G + E+ S +++ +K ++ S L++ D+ P DV S E A
Sbjct: 270 GRILEDEQSEFDERKKLFEQFKAIASFLSQVCDLSLPDDLNDVTEEEEEEDNSVEVVKQA 329
Query: 288 SGKDSSVPEPVWDDEETRAFYECLPDLRAFVPA 320
G D +W+D + + FY +P L + A
Sbjct: 330 VGNDED-SVGIWEDAKEKNFYTVIPSLGELLEA 361
>gi|302309567|ref|NP_987030.2| AGR364Cp [Ashbya gossypii ATCC 10895]
gi|299788419|gb|AAS54854.2| AGR364Cp [Ashbya gossypii ATCC 10895]
gi|374110281|gb|AEY99186.1| FAGR364Cp [Ashbya gossypii FDAG1]
Length = 1001
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 97/329 (29%), Positives = 159/329 (48%), Gaps = 16/329 (4%)
Query: 451 CVSRDLIDQLTVEFCY--LNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDV 508
C +++ ID+L+ + L++K+ RKRL++ F + + L Y+R +AT + MKDV
Sbjct: 378 CDNKEGIDELSCRYWLESLDNKATRKRLIK--FFIEQQDWSKLKLYARFIATNAETMKDV 435
Query: 509 SSMLIQMLEEEFNFLINKKDQMNIE-TKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDF 567
LI+ L+ F + Q++ ++NI F E+ KF + P L+F ++ + +
Sbjct: 436 KEELIECLDNGF------RSQLHTNRINVKNIIFFCEMVKFNLVPGFLIFHKIRTLIFNL 489
Query: 568 -THHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYL 626
+NI++ L E GRFL PE S +M MLE+L K L +EN L
Sbjct: 490 LVPNNIEILTVLFENFGRFLINKPEFSPQMEKMLELLSEKKKDHRLSVTSKNALENLLLL 549
Query: 627 CKPPERSAR--VSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCESY--LLKC 682
PP S+ +KV Q+ R L+ +L + R L+K W D Y +
Sbjct: 550 ICPPTLSSLNVEAKVLTKEQQFYRILIRKELFDIGSKKASRLLKKANWRDPAVYKTMFSL 609
Query: 683 FMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHM 742
F K K Y I L+A + + +F + +D +LE I+ LE+N +R+A +
Sbjct: 610 FTKPEKVAYQAIPLLAQCLVAIYPTYRDFVIICIDTLLENIQRDLEINGQSHYMKRIAQI 669
Query: 743 RFLGELYNYEHVDSSVIFDTLYLILVFGH 771
+L +YN + S I DT Y +L +G+
Sbjct: 670 HYLTNIYNCGMIRSEAILDTAYQLLKYGY 698
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 128/289 (44%), Gaps = 21/289 (7%)
Query: 61 LKICSLLHQRYKD-FSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFI 119
+++ S LHQR+ + F+ L++ + F + + + + + +S ++L ELY +
Sbjct: 94 VEVVSGLHQRFGEKFTLRLLELYMFNFVNPPDDAEGEKEELARTNRLKSNIRLFTELYLV 153
Query: 120 GIIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLL-ASFARQGRIFLGLPLSGPGQEIYE 178
+ S F +I KD ++ + T+ L +L + + + + L ++ + Y
Sbjct: 154 NVF---SNFDSISKD--NLPKFMAKSTSSAFLCVLKTTLSYKYKYGARLSIATLFAKKYA 208
Query: 179 EFFKGLNITADQ---KKIFKKAFHTYYNAVQELLQAEHTSL----RQMENENAKILNAKG 231
FF + + D+ + K+A + A+ E + L ++++ E+ + G
Sbjct: 209 GFFSE-HSSLDRYIREPSLKEALWALFKAMTEAVFKRTVELDKKMKKLQKEHQRAQIRTG 267
Query: 232 ELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASGKD 291
+L +E Y K+ ++ SL E+L++ P + + V E+ S + +
Sbjct: 268 KLVDEYIEEYNKIEPVFERFVSAAQSLGESLNLTAPELSSSDDESGV--NENKSIITTQV 325
Query: 292 SSVPEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQ 340
S E +WD EETR FYE LP + V + + NE + L+Q
Sbjct: 326 KSSNEKLWDSEETRKFYEVLPSVTQLVKEPITAD----GNEQTAAALKQ 370
>gi|255714743|ref|XP_002553653.1| KLTH0E03938p [Lachancea thermotolerans]
gi|238935035|emb|CAR23216.1| KLTH0E03938p [Lachancea thermotolerans CBS 6340]
Length = 1068
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 174/342 (50%), Gaps = 14/342 (4%)
Query: 437 EGTNLDALLQRLPGCVSRDLIDQLTVEFCY--LNSKSNRKRLVRALFNVPRTSLELLPYY 494
+ T L L +R+ ID+L+V++ LN K+ R+RL++ F + L Y
Sbjct: 366 DSTKLSDFFAGLEFADTREAIDELSVKYWSDSLNKKATRRRLLK--FFIETQDWSKLRIY 423
Query: 495 SRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAG 554
+R +A+ + + D LI+ L+ F + + +++N+ +NI F EL KF + P+
Sbjct: 424 ARFIASNAEYLSDTKDELIEYLDNGFRSQL-RSNRINV----KNIIFFSELVKFMLIPSY 478
Query: 555 LVFSCLKA-CLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLD 613
LVF ++ ++ +NI++ L E G+FL P +M M++++ + + +L
Sbjct: 479 LVFHKIRTLAMNIQVPNNIEILTILFENFGKFLINHPTYKDQMEKMVDLIQQKRKDHDLT 538
Query: 614 PRHVTLVENAYYLCKPPERSARVSKVRP--PLHQYIRKLLFSDLDKSSIEHVLRQLRKLP 671
+ ++N L PP S S V+ P Q+ + ++ +L S E ++ LRK
Sbjct: 539 VSNKCALDNLIVLIYPPSLSKLNSAVKELNPEQQFYQIIIRRELHTISAEKTVKLLRKAH 598
Query: 672 WSDCESY--LLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLEL 729
W D + Y + F K K Y + +++S+ GL Y+ F + V+D +LE+I GLE+
Sbjct: 599 WKDEKIYKTMFSLFTKPEKVSYQSLDVLSSVLCGLYPYYRNFVIEVIDTLLEKIERGLEI 658
Query: 730 NDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
+++ + R+A +++L L+N + V V+ + I+ FG+
Sbjct: 659 SEFNLNMVRMAQIKYLTSLFNKKLVRLEVLIEIFCKIMKFGY 700
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 123/273 (45%), Gaps = 29/273 (10%)
Query: 61 LKICSLLHQRYK-DFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFI 119
+++ S LHQR+ F+P L++ L F +S + + + + ++ RS +++ ELY +
Sbjct: 94 VEVMSALHQRFSCKFTPVLMESFLNNFSLTQSSHESEKEELARILRLRSHVRIFTELYLV 153
Query: 120 GIIEDSSIFIN-------IIKDLTSIEH---------LKDRDTTQTNLTLLASFARQGRI 163
G+ ++ ++N I K L+ E L R T T+ SF +
Sbjct: 154 GLFRNTD-YLNKENVPAFIAKKLSKKEPIIFTILKEVLNYRFRTGLTTTIATSFITK--- 209
Query: 164 FLGLPLSGPGQEIYEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENEN 223
P+ G EE L + + +K+ + Y A + +L +++ E+
Sbjct: 210 ---FPILFEGNAFNEE----LELESGTRKLLQSLIKVYTEACIGQAVELNKTLNKLKREH 262
Query: 224 AKILNAKGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGED 283
+K G+ ++E Y L ++ V+ L +AL ++ P + + + + T+G
Sbjct: 263 SKAQIRTGKNTDEYIEEYNDLLPVFERFEGAVNVLTDALQIEAPKLDKGIDSEANTTG-P 321
Query: 284 ASPASGKDSSVPEPVWDDEETRAFYECLPDLRA 316
AS + + E VW++EE R FYE LPDL +
Sbjct: 322 ASIITNQLKPNSEKVWENEEVRKFYEVLPDLSS 354
>gi|412990028|emb|CCO20670.1| predicted protein [Bathycoccus prasinos]
Length = 1357
Score = 132 bits (332), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 108/420 (25%), Positives = 191/420 (45%), Gaps = 76/420 (18%)
Query: 423 ERKVETEKEKLKGVEGTN--LDALLQRLP-GCVSRDLIDQLTVEFCYLNSKSNRKRLVRA 479
E + + EK++ + E + +DAL+ RL C + + +D V+FCY+ + +KRL
Sbjct: 592 ENETDAEKKRREDQESKDFKVDALMNRLRRDCENAEKVDAFAVDFCYVATPGAKKRLAEE 651
Query: 480 LFNVPR-TSLE------------------------------LLPYYSRMVATLSTCM-KD 507
L + P T+++ L+P+Y+R++ +S KD
Sbjct: 652 LLSPPELTNMKNNNNNNNNNNNNAMTENSSNQQQNALLMSPLVPFYARVLKLMSKVFPKD 711
Query: 508 VSSMLIQMLEEEFNFLINKKDQMNIETKIR-----------------NIRFIGELCKFK- 549
+S ++ + E+F F +N Q + R N+ ++ EL KF+
Sbjct: 712 ISDVVASKVLEKF-FNLNTTIQTTTTPQPRSNVHSSSQQQLLKQKLQNVHYVSELIKFEL 770
Query: 550 IAPAGLVFSCLKACLDDFTHHN---------IDVACNLLETCGRFLYRSPETSIRMANML 600
I P+ CL+ +++F N +++ C + CGRFL +S ++ R L
Sbjct: 771 IDPSAEAMQCLQILIENFERVNSLNAAQNGAVELMCAFVYRCGRFLCKSAKSKKRANTFL 830
Query: 601 EILMRLKNV--KNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFS----- 653
+I++RLK++ K LD + LV+ AYY +P E +P L +Y++ +
Sbjct: 831 DIILRLKSIVSKYLDETQMALVDEAYYAARPREVFRTTKPPKPVLFEYVKYIFVEQMSAD 890
Query: 654 -DLDKSSIEHVLRQLRKLPWSDCESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYH---- 708
L K + VL+ + E YL++ +K + K+ + L + LS+
Sbjct: 891 PSLAKRQLAKVLKHCDQFDDVHLERYLIRRAIKHSQQKFDDAERVVRLMSKLSQNQKDVK 950
Query: 709 -DEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLIL 767
+E V D LEE R GLE N M QRR+++ R +GEL++ + + IF L+L+L
Sbjct: 951 KNELIVKFTDAALEEFRFGLEQNLSHMTQRRVSNARVIGELFSQRCLHAESIFSCLFLLL 1010
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 15/108 (13%)
Query: 496 RMVATLSTCMKDV--SSMLIQMLE---EEFNFLINKKDQMNIETKIRNIRFIGELCKFKI 550
R+++ LS KDV + ++++ + EEF F + + + ++ N R IGEL +
Sbjct: 937 RLMSKLSQNQKDVKKNELIVKFTDAALEEFRFGLEQNLSHMTQRRVSNARVIGELFSQRC 996
Query: 551 APAGLVFSCLKACLDDFTHHNID----------VACNLLETCGRFLYR 588
A +FSCL L++ N D VA LLE CGRF R
Sbjct: 997 LHAESIFSCLFLLLNNLEPFNNDFDRKDPIRVRVANVLLEKCGRFFNR 1044
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 106/266 (39%), Gaps = 39/266 (14%)
Query: 106 KRSTLKLLLELYFIGIIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQGRI-F 164
+R+ L LL ELY I II+ ++K +E+ + +L+ LA FA+ + F
Sbjct: 329 RRAKLCLLAELYLISIIDSPKCVYEVVKKHAEMEYDVAPEAYLQSLSALAFFAKTYSLEF 388
Query: 165 LGL---------PLSGPGQEIYEEFFKGLNITADQKKI-----------FKKAFHTYYNA 204
LG G +E + +N ++ + F + H Y
Sbjct: 389 LGKEDVKLISINSTEGEEKEAKTDDVNDVNDDEEKNSVVVKCKPEVCEKFAQIIHEKYEK 448
Query: 205 VQELLQAEHTSLRQMENENA-KILNAKGELSEENSSSYEKLRKSYDHLYRNVSSLAEAL- 262
+ A L E+ ++L KGE+ + SS++ K + D L + +LAEAL
Sbjct: 449 DALVKLAASVRLASAREEDVLRVLKTKGEVPAQVSSAFSKATATRDALLKQCQTLAEALR 508
Query: 263 -DMQPPVM---------------PEDVHTTRVTSGEDASPASGKDSSVPEPVWDDEETRA 306
D P + + R +A+ A+ +S V W+ +E R
Sbjct: 509 VDKIPKLEDFMDDDIDDKDKNKEANRIELDRGLKQRNAAAANENNSDVNASEWESDEQRR 568
Query: 307 FYECLPDLRAFVPAVLLGEAEHKANE 332
FY+ L ++ +PAVLL E NE
Sbjct: 569 FYQDLLPIKESIPAVLLVEKPALENE 594
>gi|149248742|ref|XP_001528758.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146448712|gb|EDK43100.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 1130
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 111/368 (30%), Positives = 193/368 (52%), Gaps = 26/368 (7%)
Query: 414 KEKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEF--CYLNSKS 471
KE+G+E ++R+ E + G + L RL S D+ DQL VEF LN+K+
Sbjct: 376 KEQGEETLSKRENLDESQS----SGGKIQDFLNRLEDVRSNDM-DQLVVEFNNLQLNNKA 430
Query: 472 NRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMN 531
R R++R F + ++L L YY+R + + +K++ LI L+ F +++ +++N
Sbjct: 431 TRNRIMR--FFIETSTLNNLRYYTRFLKINESNLKELIEDLITYLDNGFRSQLHR-NKLN 487
Query: 532 IETKIRNIRFIGELCKFKIAPAGLVFSCLKA-CLDDFTHHNIDVACNLLETCGRFLYRSP 590
+ +NI F EL KFK+ P ++F ++ LD + +NI++ E GRFL P
Sbjct: 488 V----KNILFFCELVKFKMIPIHVIFHKIRRLTLDITSTNNIEILSVFYENVGRFLLHEP 543
Query: 591 ETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERSAR--VSKVRPPLHQYIR 648
E M M+++L NL + N + +PP + V ++ P L Q+++
Sbjct: 544 EYKDLMRGMIDLLKEKLKQSNLKVNDKLAINNLLIMVEPPAVKVQREVIELSPKL-QFVQ 602
Query: 649 KLLFSDLDKSSIEHVLRQLRKLPWSDC----ESYLLKCFMKVHKGKYGQIHLIASLTAGL 704
KL+ S+L+K++I + R L+K+ S+ LL F + Y + +A L L
Sbjct: 603 KLIRSELNKNTILLISRLLKKVFASNVGEEESQALLDSFARPDLLNYDNLPALAKL---L 659
Query: 705 SRYHDE-FAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTL 763
+ D+ V +VD ++E I GLELND+ M + R++ ++++ E+YN+ ++ +I D L
Sbjct: 660 HTFADKRVIVIIVDTIVENIIRGLELNDFRMNRARMSQVKYIAEMYNHGLLNYKLINDLL 719
Query: 764 YLILVFGH 771
Y IL +GH
Sbjct: 720 YRILCYGH 727
>gi|156837320|ref|XP_001642688.1| hypothetical protein Kpol_364p2 [Vanderwaltozyma polyspora DSM
70294]
gi|156113247|gb|EDO14830.1| hypothetical protein Kpol_364p2 [Vanderwaltozyma polyspora DSM
70294]
Length = 1067
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 171/342 (50%), Gaps = 14/342 (4%)
Query: 441 LDALLQRLPGCVSRDLIDQLTVEFCY--LNSKSNRKRLVRALFNVPRTSLELLPYYSRMV 498
++ L +++ ID+L+ + L++K+ RKRL++ F + L Y+R V
Sbjct: 372 INDFFSSLEMAETKEDIDKLSKSYWSEGLDNKATRKRLLK--FFIETQDWSKLRIYARFV 429
Query: 499 ATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFS 558
AT S ++ L+ L+ F ++ +++N +NI F E+ KF + P ++F
Sbjct: 430 ATNSKYFPELYDELLNYLDSGFRSQLHS-NRINF----KNIIFFSEMVKFMLVPKFMIFH 484
Query: 559 CLKACLDDFT-HHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHV 617
++ L + +NI++ L E G+FL E +M M++++ + L+
Sbjct: 485 KIRTLLMNMNVPNNIEILTVLFEHLGKFLINHSEYQEQMKKMVDLVKERSRDRQLNLNLK 544
Query: 618 TLVENAYYLCKPPERSARVSKVRP--PLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDC 675
++N Y L PP S+V+ P ++ ++ +L +S++ + + ++K W D
Sbjct: 545 GAMDNLYILVYPPSVKTLNSEVKSYTPEQKFYSTMIRRELANTSVKILSKLIQKAHWKDE 604
Query: 676 E--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYG 733
E + F K Y I +++ + + + Y F V +D+++E + GLE N+Y
Sbjct: 605 EIVNTFFDLFTSPEKIPYQNIPIMSKILSDIYVYQRNFVVKCIDQIIENVDRGLETNEYN 664
Query: 734 MQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHGTAE 775
+RLA++R+L ++YN E + S V+ +TLY IL FGH ++
Sbjct: 665 DNLQRLANIRYLTDIYNSEIIKSDVLMETLYHILKFGHPNSQ 706
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 116/281 (41%), Gaps = 41/281 (14%)
Query: 57 LVYFLKICSLLHQRYKD-FSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLE 115
++ +++ S LHQR+ + F+ L + L F S D + + + K R L++ E
Sbjct: 90 IIAAVEVISALHQRFNEQFTERLFELFLHNFNSPISEIDSEKEELTRINKIRGNLRIFTE 149
Query: 116 LYFIGII---EDS------------------SIFINIIKDLTSIEHLKDRDTTQTNLTLL 154
LY +GI ED+ I NI+K E L + + +
Sbjct: 150 LYLVGIFVIKEDALSKEQLPSFLSKKSNKREPILFNILK-----ETLNYKFKLGYSTIIA 204
Query: 155 ASFARQGRIFLGLPLSGPGQEIYEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHT 214
SF ++ F S ++ F +D KK+ + F + +AV +
Sbjct: 205 TSFVKRSSTFFDNDDSS-----WDSFISD----SDLKKLIQSLFKIFTDAVFARVIDLDK 255
Query: 215 SLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVH 274
++++ E+ K G+L +E Y+ L YD + ++LAE ++ P++ D
Sbjct: 256 KMKKLMKEHQKCQIRTGKLRDEYIEEYDSLSPIYDRFSASSTALAEFFKLEAPIIDNDDT 315
Query: 275 TTRVTSGEDASPASGKDSSVPEPV-WDDEETRAFYECLPDL 314
V SP + P V WD+++ R FYE LPD+
Sbjct: 316 EDIVQ----KSPMITTQTVTPGQVLWDNDDMRRFYENLPDI 352
>gi|444313963|ref|XP_004177639.1| hypothetical protein TBLA_0A03200 [Tetrapisispora blattae CBS 6284]
gi|387510678|emb|CCH58120.1| hypothetical protein TBLA_0A03200 [Tetrapisispora blattae CBS 6284]
Length = 1071
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 171/356 (48%), Gaps = 13/356 (3%)
Query: 426 VETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEF--CYLNSKSNRKRLVRALFNV 483
+E+ K + + + + + + +++ ID L ++ L++K+ R +L++ F
Sbjct: 357 LESMKNEKSAPDPSQIKLFFEDMEMVETKEGIDDLIRQYWKSNLDNKATRNKLIK--FFT 414
Query: 484 PRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIG 543
L Y+R +A + + + + ML+ F ++ +++N+ +NI F
Sbjct: 415 ETQDWSKLRLYARFLAANAPYLPETKDEFVNMLDSSFRSQLHS-NRINV----KNIIFFS 469
Query: 544 ELCKFKIAPAGLVFSCLKACLDDF-THHNIDVACNLLETCGRFLYRSPETSIRMANMLEI 602
E+ KF + P L+F +++ + + +NI++ L E GRFL PE +M ++++
Sbjct: 470 EMVKFAMVPKYLIFHKIRSLIMNMQVPNNIEILTVLFEQLGRFLINHPEYKDQMEKLVDL 529
Query: 603 LMRLKNVKNLDPRHVTLVENAYYLCKPPE-RSARVSKVRPPLHQYIRKLLFSDLDKSSIE 661
+ + + L ++N L PP +S + P +++R L+ +L +
Sbjct: 530 IKEKRKDRQLHMNTKGALDNLITLIYPPSVKSLNNVEDESPEQEFLRILIRRELSTVDTK 589
Query: 662 HVLRQLRKLPWS--DCESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEV 719
+++ W+ D L K F Y I ++ ++ GL H F V VD++
Sbjct: 590 LATNLVKRSSWTNPDISRTLFKLFTTPESISYQYIPILTTILNGLKDTHPNFVVKCVDQI 649
Query: 720 LEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHGTAE 775
LE I+ GLE N+Y RR+A +R+L E++N V+S VI +T+Y I+ FG+ +
Sbjct: 650 LENIQRGLEKNEYNENMRRIAQIRYLTEMFNLNIVNSEVIIETIYRIIKFGYPNGQ 705
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 64/298 (21%), Positives = 130/298 (43%), Gaps = 49/298 (16%)
Query: 63 ICSLLHQRY-KDFSPCLIDGLLKVFFPGKSGEDLDADRN--LKAMKKRSTLKLLLELYFI 119
+ LHQR+ + F+P LI+ L F ED+ ++ L+ + ++ L++ ELY
Sbjct: 96 VIGALHQRFGQRFTPYLIELFLSNF--SNPCEDITVEKFELLRINRLKANLRIFSELYLY 153
Query: 120 GIIED---------------------SSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFA 158
G+I S + +++K+ I H + ++ T++ + F
Sbjct: 154 GVIRSIEELEPKTGLPKFLLLKKGKASPLIYSVLKE---ILHYRFKEGYSTSIAIF--FL 208
Query: 159 RQGRIFLGLPLSGPGQEIYEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQ 218
++ +FL + I+++F N+ K + + F + +AV + +
Sbjct: 209 KRFPMFLD-----SEESIWDDFIFDSNL----KNLLQSLFRAFMDAVFTYTIDLNNKTNK 259
Query: 219 MENENAKILNAKGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRV 278
+ ++ K G+ E +++L ++ SL+E + PP + E T +
Sbjct: 260 LMKDHQKCQIRTGKERNEYIDEFDELYPIFERFKNASQSLSEFFKVDPPKIEE----TFI 315
Query: 279 TSGEDASPASGKDSSVP--EPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPS 334
E A+ + +P + VW++E+TR FYE LPDL+ + ++ + E A +PS
Sbjct: 316 VDYESANKPMITNQILPPDQRVWENEDTRKFYELLPDLKDILESM---KNEKSAPDPS 370
>gi|367001100|ref|XP_003685285.1| hypothetical protein TPHA_0D02130 [Tetrapisispora phaffii CBS 4417]
gi|357523583|emb|CCE62851.1| hypothetical protein TPHA_0D02130 [Tetrapisispora phaffii CBS 4417]
Length = 1046
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 167/338 (49%), Gaps = 14/338 (4%)
Query: 441 LDALLQRLPGCVSRDLIDQLTVEFC--YLNSKSNRKRLVRALFNVPRTSLELLPYYSRMV 498
+D + RL ++D IDQL ++ ++++K+ RKRL++ F + L Y+R V
Sbjct: 370 VDEFMDRLIIADTKDSIDQLCHDYWLNHIDNKATRKRLLK--FFIETQDWSKLNLYARFV 427
Query: 499 ATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFS 558
A M D+S+ L+ L+ F+ ++ D++N +NI F + KF + P ++F
Sbjct: 428 AANKDHMPDLSTQLVNYLDTGFSSQLHS-DRINF----KNIIFFSQFVKFNMVPQFMIFH 482
Query: 559 CLKACLDDF-THHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHV 617
++ + + +NI++ L E G+ L P++ M M+ ++ + ++
Sbjct: 483 KIRTLIINLQVPNNIEILTVLFENLGKLLINHPQSKENMEKMMSLVREKSKDRQINMNLK 542
Query: 618 TLVENAYYLCKPPERSARVSKVR--PPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSD- 674
+ V N L PP + ++ R + L+ +L S++ V + ++K W D
Sbjct: 543 SAVNNLITLVYPPSIKSLNTEKRELSGEEMFYITLIRKELHNVSVKLVTKLIKKASWKDE 602
Query: 675 -CESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYG 733
+ LL F + K Y + +++ + A L F V +VD++L EI LGLE ++Y
Sbjct: 603 NVVATLLSLFTEPEKVHYQSLPVLSKILAELYSQRKNFVVKIVDQLLYEIDLGLETDNYE 662
Query: 734 MQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
R+A +R+L ELYN + S ++ TLY IL +G+
Sbjct: 663 NNVSRIASIRYLTELYNASIIKSDLLMQTLYSILRYGY 700
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 133/318 (41%), Gaps = 48/318 (15%)
Query: 25 PFCIKNKSNCI-CKYIANIYIYTYTLLLGLWLT---LVYFLKICSLLHQRYKD-FSPCLI 79
P +K+ S + KY++ I I + L L ++ +++ S+LHQR+K FS L
Sbjct: 54 PSLVKDLSEVLLSKYLSEIIITSNEALSNLNNKNDDIIAAVEVISILHQRFKSQFSEKLF 113
Query: 80 DGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIGI------------------ 121
+ L F + D + D + K L++ ELY +GI
Sbjct: 114 ELFLSNFTNPSTELDNEKDELTRISKINCNLRIFTELYLVGIFSLKVDSISKIIFHLFYP 173
Query: 122 ---IEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQGRIFLGLPLSGPGQEIYE 178
++ +I +++K++ L R T + + S+ ++ F +
Sbjct: 174 KKMVKKDAILFSLLKEI-----LNHRFRTGYSTIIATSYCKKFPTFFNSD---------D 219
Query: 179 EFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENS 238
+ + + D K + F + A + LR++ E+ K G++ +E
Sbjct: 220 KSWDSIISDPDLKNSIQMLFKIFVEAAFTRTVDMNKKLRKLLREHKKCQIRTGKVRDEYI 279
Query: 239 SSYEKLRKSYDHLYRNVSSLAEAL--DMQPPVMPEDVHTTRVTSGEDASPASGKDSSVPE 296
Y++L ++ N +SLA AL +++ PV+ D + ++ +P S
Sbjct: 280 DEYDELLPCFERF--NSASLAFALIFNLEGPVLESD----DAEASKEVTPMITNQSDSTN 333
Query: 297 PVWDDEETRAFYECLPDL 314
++D+E+TR FYE LPDL
Sbjct: 334 QIFDNEDTRRFYEALPDL 351
>gi|403214385|emb|CCK68886.1| hypothetical protein KNAG_0B04520 [Kazachstania naganishii CBS
8797]
Length = 1054
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 174/360 (48%), Gaps = 18/360 (5%)
Query: 421 DTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCY--LNSKSNRKRLVR 478
D K E+ K ++ L +++ ID+L+ E+ +++++ + RL++
Sbjct: 355 DVAIKASQERNVTKTDNNETVNHFFDELEIAETKEQIDRLSFEYWNSGIDNRATKNRLLK 414
Query: 479 ALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNI-ETKIR 537
F + + YSR +A+ S D+ IQ L+ F ++Q++ + ++
Sbjct: 415 --FFIEGQDWSKIKIYSRFLASNSKHFPDIVDEFIQYLDTGF------RNQLHSNKINVK 466
Query: 538 NIRFIGELCKFKIAPAGLVFSCLKACLDDF-THHNIDVACNLLETCGRFLYRSPETSIRM 596
N+ F E+ KF + P+ +VF ++ + + +NI++ E G+FL PE M
Sbjct: 467 NVIFFSEMVKFMLVPSFVVFHKIRTLIMNLQVPNNIEILTIFFEHAGKFLLFKPEYKNEM 526
Query: 597 ANMLEIL-MRLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPL--HQYIRKLLFS 653
M+++L +++K+ + L + +EN L PP + + R ++ L+ +
Sbjct: 527 DKMVQLLKLKMKD-RQLGMNLKSALENTMVLLFPPSVKSLNVEDRELTDEEKFYHVLIRT 585
Query: 654 DLDKSSIEHVLRQLRKLPWSD--CESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEF 711
+L ++ + + + WSD + L F + K Y I ++A + GL Y EF
Sbjct: 586 ELPNLKVKEHINLISRATWSDNNVRNTLHVLFTEPEKMNYQNIPILARVMTGLYPYRREF 645
Query: 712 AVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
+ V+D++LE I GLE N + R+A +R L E++N E + S V+ DT+Y I+ FGH
Sbjct: 646 VIRVIDQLLENIERGLESNAHNQNMSRIAQVRLLTEIFNMEMIKSDVLVDTMYHIMKFGH 705
>gi|297599638|ref|NP_001047500.2| Os02g0631500 [Oryza sativa Japonica Group]
gi|255671110|dbj|BAF09414.2| Os02g0631500, partial [Oryza sativa Japonica Group]
Length = 80
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 58/66 (87%), Positives = 63/66 (95%)
Query: 462 VEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFN 521
VEFCYLNSK++RK+LVR LFNVPRTSLELLPYYSR+VATLSTCMKDV SML+ MLEEEFN
Sbjct: 13 VEFCYLNSKASRKKLVRTLFNVPRTSLELLPYYSRLVATLSTCMKDVPSMLLSMLEEEFN 72
Query: 522 FLINKK 527
FLINKK
Sbjct: 73 FLINKK 78
>gi|432943810|ref|XP_004083281.1| PREDICTED: regulator of nonsense transcripts 2-like [Oryzias
latipes]
Length = 1275
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 153/313 (48%), Gaps = 39/313 (12%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
+ +CSL HQRY +F+P L+ K F E D+ K R+ L+ + EL +G
Sbjct: 222 VHLCSLFHQRYAEFAPLLLLAWKKHF------EARKEDKAPNVSKLRTDLRFIAELTIVG 275
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGL------------ 167
+ D I + L +I DR+T T+++++ SF + G GL
Sbjct: 276 LFTDKEGLSLIYEQLKNIIGT-DRET-HTHVSVVISFCKHCGDDIAGLVPRKVKLAAEKF 333
Query: 168 PLSGPGQEIYEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKIL 227
L+ P EI I+ ++++ F+ Y+ ++ + L+ +H L+ +E +N +IL
Sbjct: 334 DLTFPPCEI---------ISVEKQQPFQNLLREYFTSLTKHLKKDHRELQNIERQNRRIL 384
Query: 228 NAKGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPED--VHTTRVTSGEDAS 285
++KGELSE+ YE+ SY L N SLA+ LD P +P+D V + +
Sbjct: 385 HSKGELSEDRHKQYEEFATSYQKLLANTQSLADLLDENMPELPQDKTVQEEHGPGIDIFT 444
Query: 286 PASGKDSSVPEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPA 345
P + + +W+DE+ R FYE L DL+AFVPA+L K NE S + ++ D A
Sbjct: 445 PGKPGEYDLEGGIWEDEDARNFYENLVDLKAFVPAILF-----KDNEKSSQGKDK--DEA 497
Query: 346 SEPDQGQLAAQDT 358
+ G+ AA T
Sbjct: 498 KDGKDGKEAASTT 510
>gi|354546769|emb|CCE43501.1| hypothetical protein CPAR2_211450 [Candida parapsilosis]
Length = 1071
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/347 (27%), Positives = 173/347 (49%), Gaps = 23/347 (6%)
Query: 437 EGTNLDALLQRLPGCVSRDLIDQLTVEF--CYLNSKSNRKRLVRALFNVPRTSLELLPYY 494
+G + L RL +L +QL VEF LN+K+ + R++R F + +++ L YY
Sbjct: 374 DGEKIQEFLDRLEDVRGNNL-EQLVVEFNNLNLNNKATKNRIMR--FFIETSTVNNLKYY 430
Query: 495 SRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAG 554
+R + + ++ LI L++ F I++ +++N+ +NI F EL KFK+ P
Sbjct: 431 TRFLKINELNLSELIEELIIYLDKGFRSRIHR-NKLNV----KNILFFVELVKFKMVPKH 485
Query: 555 LVFSCLKA-CLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLD 613
+VF +++ L+ + +N+++ E GRFL ++ M M+ +L NL
Sbjct: 486 VVFHKIRSLTLNITSTNNLEILTVFYEHVGRFLLHDADSKDLMREMIGLLKEKSKQSNLK 545
Query: 614 PRHVTLVENAYYLCKPPERSARVSKVR--PPL---HQYIRKLLFSDLDKSSIEHVLR--- 665
+ N +PP A+V +R P L +++ K+L +L+ + V++
Sbjct: 546 VNDKLAINNLLITVEPP--VAKVQSLRHVPKLSSKQKFVAKILREELNADTQPLVVKLFK 603
Query: 666 -QLRKLPWSDCESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIR 724
+ L + ++ ++ CF + Y I +A + + V VD VLE I
Sbjct: 604 SKFTNLGQPEFQT-MVDCFSSPNLVNYDNIPSLAKTLSNFGEKNKFLVVLCVDTVLENII 662
Query: 725 LGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
GLELND+ M + R+A ++FL ELYNY+ ++ ++ D LY I+ +GH
Sbjct: 663 RGLELNDFRMNRTRMAQVKFLAELYNYKVINFKLVNDMLYRIVCYGH 709
Score = 45.8 bits (107), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 125/272 (45%), Gaps = 19/272 (6%)
Query: 61 LKICSLLHQRY-KDFSPCLIDGLL-KVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYF 118
+++ S LHQR+ K F L++ +L ++ P KS D D ++++ L+L+ E Y
Sbjct: 95 VEVVSALHQRFGKQFIGELLNNILVQMMNPSKSD---DKDDPSCVTRQKNLLRLVGEFYI 151
Query: 119 IGIIEDSSIF-----INIIKDLTSIEHLKDRDTTQTNLTLLASFARQGRIFLGLPLSGPG 173
+GI+ ++ F I +I+ + S++ ++ L L +F + L + S
Sbjct: 152 VGILGTANDFLDDLDIKVIR-VYSLDKRRNEPILTLLLKYLLNFDIESGRSLNMVQSFLR 210
Query: 174 QEIYEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGEL 233
+ + F + + +D K + K+ F Y AV ++ + +++ N K G +
Sbjct: 211 RYGHIIFVEDELLPSDTKNVLKQIFLIYTEAVFGIMMKLKKQVHKLDVRNKKAAIRTGRI 270
Query: 234 SEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTT--RVTSGEDASPASGKD 291
E ++ K ++H +++V+S + P +P D++ + V ++A +
Sbjct: 271 QETEQLELDEKTKLFEH-FKSVASFLSQVCTIP--LPNDLNDSAEEVEEEDNAIEVVKQA 327
Query: 292 SSVPEP---VWDDEETRAFYECLPDLRAFVPA 320
+S E VW+D + + FY +P L + A
Sbjct: 328 ASSDEDLYGVWEDVKEKNFYTVIPSLGELMEA 359
>gi|224100877|ref|XP_002312049.1| predicted protein [Populus trichocarpa]
gi|222851869|gb|EEE89416.1| predicted protein [Populus trichocarpa]
Length = 78
Score = 120 bits (302), Expect = 2e-24, Method: Composition-based stats.
Identities = 59/75 (78%), Positives = 66/75 (88%), Gaps = 1/75 (1%)
Query: 269 MPEDVHTTRVTSGEDAS-PASGKDSSVPEPVWDDEETRAFYECLPDLRAFVPAVLLGEAE 327
MPED HTTRVTSGEDAS PA+GKD+S+ E +WDDE+TRAFYECLPDLRAFVPAVLLGEAE
Sbjct: 1 MPEDGHTTRVTSGEDASSPAAGKDTSLLEALWDDEDTRAFYECLPDLRAFVPAVLLGEAE 60
Query: 328 HKANEPSVKPLEQPT 342
KANE S K +QP+
Sbjct: 61 PKANEHSAKTQDQPS 75
>gi|390339762|ref|XP_003725084.1| PREDICTED: regulator of nonsense transcripts 2-like
[Strongylocentrotus purpuratus]
Length = 1050
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/127 (48%), Positives = 85/127 (66%), Gaps = 7/127 (5%)
Query: 461 TVEFCY-LNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEE 519
V+FC LN+KSNRK+L +ALFNVPR L+LLP+YSR+VATL CM D+++ L + L+ E
Sbjct: 781 AVDFCLNLNTKSNRKKLSKALFNVPRVRLDLLPFYSRLVATLYVCMPDIATDLAERLKGE 840
Query: 520 FNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNID-VACNL 578
F + + KKDQM +E+KI+ RFIGEL KFK+ CLK T +D +A ++
Sbjct: 841 FRWHVRKKDQMMVESKIKVSRFIGELTKFKMCSKADTLQCLK-----LTQTELDLMAIDM 895
Query: 579 LETCGRF 585
+ T G+
Sbjct: 896 MGTDGQL 902
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 114/238 (47%), Gaps = 14/238 (5%)
Query: 105 KKRSTLKLLLELYFIGIIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRI 163
K R L+ L EL G+ + + L++I +K ++++ SF + G
Sbjct: 467 KIRVELRFLAELIVNGVFTEKEGLPLLNNQLSAI--MKGDKENHNYISIIISFTKHCGED 524
Query: 164 FLGL-PLSGP--GQEIYEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQME 220
F G+ P Q+ E + K + +Y+++ + L+ +H L+ ME
Sbjct: 525 FAGIIPRKHKLVAQKYELELVSSEVFSTQLKTAYCNLLKDHYSSLSKYLERQHKELQNME 584
Query: 221 NENAKILNAKGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMP-EDVHTTRVT 279
+N + L KGELSEE +E+ + SY L N S+ A+ LD P +P E++ T +
Sbjct: 585 RQNRRTLQNKGELSEERRKRHEEKQSSYQKLLMNTSTFADLLDEDMPDLPVEELTQTELD 644
Query: 280 SGEDASPASGKDSSVPE-----PVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANE 332
A G D + E +W+D++TR F+E L +LR+ VPA+L + ++ +N+
Sbjct: 645 LM--AIDMMGTDGQLTEFDWANSLWEDDDTRTFHENLINLRSMVPAILFKDTDNTSNQ 700
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 33/46 (71%)
Query: 736 QRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHGTAETYWTHQ 781
QRR++ ++FLGELYNY V+SSVIF TLY +L FG TY + +
Sbjct: 941 QRRVSILKFLGELYNYRMVESSVIFKTLYSLLRFGVVLEATYISRR 986
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 73/170 (42%), Gaps = 7/170 (4%)
Query: 63 ICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKK-RSTLKLLLELYFIGI 121
+CSL RY DFS L+ GL + ED D+ + + K R L+ L EL G+
Sbjct: 293 LCSLFLNRYGDFSSQLLQGLQRALPAPCKKEDKDSKQQIIFDNKIRVELRFLAELIVNGV 352
Query: 122 IEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLG-LPLSGP--GQEIY 177
+ + L++I +K ++++ SF + G F G +P Q+
Sbjct: 353 FTEKEGLPLLNNQLSAI--MKGDKENHNYISIIISFTKHCGEDFAGIIPRKHKLVAQKYE 410
Query: 178 EEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKIL 227
E + K + +Y+++ + L+ +H L+ ME +N + L
Sbjct: 411 LELVSSEVFSTQLKTAYCNLLKDHYSSLSKYLERQHKELQNMERQNRRTL 460
>gi|448115768|ref|XP_004202900.1| Piso0_001766 [Millerozyma farinosa CBS 7064]
gi|359383768|emb|CCE79684.1| Piso0_001766 [Millerozyma farinosa CBS 7064]
Length = 1036
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 165/343 (48%), Gaps = 16/343 (4%)
Query: 438 GTNLDALLQRLPGCVSRDLIDQLTVEFC--YLNSKSNRKRLVRALFNVPRTSLELLPYYS 495
G +L+ + L + ID L+ +F LN+K+ R RL++ F V S L YY+
Sbjct: 372 GDSLNEFFKNLENVSNEAEIDSLSCQFMELKLNNKATRNRLMK--FFVELQSTTRLKYYA 429
Query: 496 RMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGL 555
R + + D+ + L++ F + + + ++NI F EL KF + P +
Sbjct: 430 RFLKITAPYNGDLIREFTEYLDKGFRSQLYQNRLI-----LKNIFFFCELIKFGLIPPHV 484
Query: 556 VFSCLKA-CLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDP 614
+F +++ L+ + +NID+ E CGRFL P S MA M+E+L + + L
Sbjct: 485 IFHKIRSLTLNISSTNNIDILSVFYEQCGRFLMYEPAYSNLMAEMIELLKTKQKNELLSV 544
Query: 615 RHVTLVENAYYLCKPPERS--ARVSKV-RPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLP 671
+ N + P+ + V +PPLHQ+I ++L +L+K + VL+ L+K+
Sbjct: 545 NDKLAINNILNIVLLPDTKLLQNIESVDQPPLHQFIVRVLKFELNKKTSNIVLKLLKKID 604
Query: 672 WSD---CESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLE 728
+ + ++ L F + I + + +++ V +D + E+ G+E
Sbjct: 605 YKNDIAIQNLLADVFSSPDDMSFESITEVYKICDKITKKCKSVLVKTIDALAEKTIRGVE 664
Query: 729 LNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
+NDY + R+++++ LGELYN + + + D Y IL FGH
Sbjct: 665 MNDYRQNRARVSYVKALGELYNLKLLTLKFVLDLCYKILSFGH 707
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 44/74 (59%), Gaps = 8/74 (10%)
Query: 57 LVYFLKICSLLHQRYKD-FSPCLIDGL-------LKVFFPGKSGEDLDADRNLKAMKKRS 108
+V +++ S LHQR+ D F+P ++ G+ L G S E+ D + K +K++
Sbjct: 91 VVGAVELLSALHQRFSDNFTPYVMSGVICGLPLALSKSGSGISKEEKDNEEQQKVLKQKQ 150
Query: 109 TLKLLLELYFIGII 122
T+KLL+EL+ +G++
Sbjct: 151 TIKLLMELHLVGLL 164
>gi|159478182|ref|XP_001697183.1| UPF2 protein [Chlamydomonas reinhardtii]
gi|158274657|gb|EDP00438.1| UPF2 protein [Chlamydomonas reinhardtii]
Length = 301
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 125/257 (48%), Gaps = 46/257 (17%)
Query: 105 KKRSTLKLLLELYFIGIIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQGR-- 162
++R+ L+LL EL G++ ++ + ++KDL ++ KDR+ T LTLL SFAR R
Sbjct: 44 RRRAALRLLGELLAAGVVSSATPLLTVLKDLALPDYKKDREGAITALTLLGSFARPAREL 103
Query: 163 ------------------IFLGLPLSGPG----------------QEIYEEFFKGLNITA 188
L P + G + + E K +
Sbjct: 104 LLGLQLPAAALAAETAVPAELAQPGAAAGLPLDLAEALAALRAEQEALQTELEKRFVLPT 163
Query: 189 DQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSY 248
+ + K F + A L +H L+++E EN+ ++N +G+L E ++ YE+ RK+Y
Sbjct: 164 SEAGVLSKVFDRAFEAAAAALGEDHRQLQEIEAENSALVNTRGDLPAEAAAEYERRRKAY 223
Query: 249 DHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASP-ASGKDS---------SVPEPV 298
+ L+R V++LAE L PV + TR+ +G+ AS A+GKD+ + PE
Sbjct: 224 EALHRAVAALAEGLGRDMPVAAAEDAFTRLGAGDSASKEAAGKDAGRDAGGDAGAAPEHA 283
Query: 299 WDDEETRAFYECLPDLR 315
++D + RAFYE LP++R
Sbjct: 284 FEDPDVRAFYESLPEVR 300
>gi|448113147|ref|XP_004202278.1| Piso0_001766 [Millerozyma farinosa CBS 7064]
gi|359465267|emb|CCE88972.1| Piso0_001766 [Millerozyma farinosa CBS 7064]
Length = 1037
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 164/343 (47%), Gaps = 16/343 (4%)
Query: 438 GTNLDALLQRLPGCVSRDLIDQLTVEFC--YLNSKSNRKRLVRALFNVPRTSLELLPYYS 495
G +++ + L + ID L+ +F LN+K+ R RL++ F + S L YY+
Sbjct: 373 GDSVNEFFKNLENVSNESEIDSLSCQFMELKLNNKATRNRLMK--FFIELQSTTRLKYYA 430
Query: 496 RMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGL 555
R + + D+ + L++ F + + + ++NI F EL KF + P +
Sbjct: 431 RFLKITAPYNSDLIREFTEYLDKGFRSQLYQNRLV-----LKNIFFFCELIKFGLIPPHV 485
Query: 556 VFSCLKA-CLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDP 614
+F +++ L+ + +NID+ E CGRFL P S MA M+E+L + + L
Sbjct: 486 IFHKIRSLTLNISSTNNIDILSVFYEQCGRFLMYEPAYSNLMAEMIELLKTKQKNELLSV 545
Query: 615 RHVTLVENAYYLCKPPER---SARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLP 671
+ N + P+ + S +PPLHQ+I ++L +L+K + VL+ L+K+
Sbjct: 546 NDKLAINNILNIVLLPDTKLLQSIESVDQPPLHQFIVRVLKFELNKKTSNIVLKLLKKID 605
Query: 672 WSD---CESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLE 728
+ + ++ L F + + I + + +++ V +D + E+ G+E
Sbjct: 606 YKNDITIQNLLADVFSTPDEMSFESITEVYKICDKITKKCKSVLVKSIDALAEKTIRGVE 665
Query: 729 LNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
+NDY + R+++++ LGELYN + + D Y IL GH
Sbjct: 666 MNDYRQNRARVSYVKALGELYNLNLLTLKFVLDLCYKILSLGH 708
Score = 44.3 bits (103), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 124/285 (43%), Gaps = 40/285 (14%)
Query: 57 LVYFLKICSLLHQRY-KDFSPCLIDGLLKVFFP--------GKSGEDLDADRNLKAMKKR 107
+V +++ S LHQR+ ++F+P ++ G++ P G S E+ D + K +K++
Sbjct: 91 VVGAVELLSALHQRFSENFTPYVMSGVI-CGLPMAASKSGTGVSKEEKDKEEQQKVLKQK 149
Query: 108 STLKLLLELYFIGII------EDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQG 161
T+KLL+EL+ +G++ + S+ NI K ++ D L L + +RQ
Sbjct: 150 QTIKLLMELHLVGLLRTFKDCDRESLPENISKRFPKLQ-----DEPVVVLVLKDTLSRQ- 203
Query: 162 RIFLGLPLSGPGQEIYEEFFKGL--------NITADQKKIFKKAFHTYYNAVQELLQAEH 213
I G LS +++ + F+ L I+ + + F Y N + L
Sbjct: 204 -INSGCSLSVT--QLFLKRFQHLIYASSSSDLISDSLRATLQNIFKIYTNGIFGALVLWK 260
Query: 214 TSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYRNVS--SLAEALDMQPPVMPE 271
++ ++ + + G+LS+E+ + + + +D S+ L+M + E
Sbjct: 261 QKVQSLKESHKRTSIRTGKLSDESVNQLNNVVQIFDKFVATSQYLSILTGLEMPDCSINE 320
Query: 272 DVHTTRVTSGEDASPASGKDSSVPEPVWDDEETRAFYECLPDLRA 316
D + ++A P S + WD + + FY PD+ A
Sbjct: 321 DTPEVKEEVIKNAVPTSNDLGT-----WDSIKEKNFYTKFPDIPA 360
>gi|294884799|gb|ADF47414.1| up-frameshift-2 nonsense mediated mRNA decay factor, partial
[Dugesia japonica]
Length = 495
Score = 112 bits (281), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 88/127 (69%), Gaps = 2/127 (1%)
Query: 646 YIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAG 703
++RKLL+ DL+K + + + + LRK W+D E + ++ F +V + K+ + +AS+ AG
Sbjct: 1 FLRKLLYVDLNKHNNDKIFKLLRKFNWNDAEFLDFAVQTFTEVWRVKFNNVPYLASVLAG 60
Query: 704 LSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTL 763
L+ YH+E V+VVD ++EE+R+G+E+ND Q R++ +R+LG Y Y+ V+++VIF+ L
Sbjct: 61 LAPYHEELVVSVVDNLIEEVRVGMEVNDPKFNQNRVSVIRYLGYFYVYKLVNANVIFNVL 120
Query: 764 YLILVFG 770
Y ++ FG
Sbjct: 121 YSLISFG 127
>gi|449511633|ref|XP_002199877.2| PREDICTED: regulator of nonsense transcripts 2-like, partial
[Taeniopygia guttata]
Length = 388
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 70/106 (66%), Gaps = 2/106 (1%)
Query: 667 LRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIR 724
+RKLPW D E Y++ C + + KY IH +A+L AGL Y ++ + VVD VLE+IR
Sbjct: 1 MRKLPWQDAEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDVGIHVVDGVLEDIR 60
Query: 725 LGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
LG+E+N QRR++ +FLGELYNY V+S+VIF TLY FG
Sbjct: 61 LGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFG 106
>gi|190348495|gb|EDK40954.2| hypothetical protein PGUG_05052 [Meyerozyma guilliermondii ATCC
6260]
Length = 980
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 160/345 (46%), Gaps = 22/345 (6%)
Query: 438 GTNLDALLQRLPGCVSRDLIDQLTVEF-CYLNSKSNRKRLVRALFNVPRTSLELLPYYSR 496
+ + ALL +L D + L EF LN+K++R+R+ R T+ ++
Sbjct: 344 ASRMTALLAKLSVAGDED-VSSLVSEFNSGLNNKASRQRIRR--LCTESTNFSNFKIVAK 400
Query: 497 MVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLV 556
+ + + +I L+++ I D++N R++ F EL KFK+ P +V
Sbjct: 401 FLKMNEQSLGPTINEIIVALDDKLRGQI-YHDKLNF----RSVYFFVELVKFKLIPTHVV 455
Query: 557 FSCL-KACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPR 615
F + K L+ HN D+ E CGRFL + M ML++L + KNL
Sbjct: 456 FHKIHKLILNIKNIHNTDILAVFFEQCGRFLLHDTDYRPFMVEMLDLLQSEQKNKNLTIH 515
Query: 616 HVTLVENAYYLCKPPE-RSARVSKVRPPLHQYIRKLLFSDLDK-----SSIEHVLRQLRK 669
+ + + PPE + R K+ PP Q++ + ++L +S+ ++ Q
Sbjct: 516 DKSSIRTLLMMIDPPEVKVERKRKILPPEEQFLLHVFHTELTSAPRTATSVGTIITQCN- 574
Query: 670 LPWSDCE---SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLG 726
WS + S L + F + + IH +A + ++ + V VVD +E I G
Sbjct: 575 --WSANQVAYSTLERIFSRPQDVNFDVIHNLAVVLQRYVKHDRQLLVRVVDTTVENIIRG 632
Query: 727 LELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
LE++DY +++ RL + +LGEL+N V S ++ L+ I+ FGH
Sbjct: 633 LEIDDYKIKRDRLCDVSYLGELWNCGLVTSKLVVTILFTIITFGH 677
Score = 39.3 bits (90), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 103/264 (39%), Gaps = 43/264 (16%)
Query: 62 KICSLLHQRYK-DFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
++ + LH R+K +FS GLL +FF G +D ++++R+ L+L++E + IG
Sbjct: 98 EVTTALHTRFKSEFS----SGLLGLFFQG-----IDPT-TTTSIRQRNLLRLMMEFHLIG 147
Query: 121 IIEDSSIFINIIKDL------TSIEHLKDRDTTQTNLTLLASFARQGRIFLGLPLSGPGQ 174
+ KD +KD D + + ++ L + +G +
Sbjct: 148 LFRTVG---GTTKDALPDRLAKRFAEIKDEDAVVIAVKEVLAYDVTSEGALSVA-TGFLR 203
Query: 175 EIYEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELS 234
E+ L K F Y ++LQ+ ++ N K G +
Sbjct: 204 RYGEQLTPKL----------KTLFVAYAQESFKVLQSVAADTAKLTKANRKKALKVGRIL 253
Query: 235 EENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASG----K 290
EE + E+ + Y+ R LAE LD+Q P + T D + S +
Sbjct: 254 EEENVKLEEQEQLYEKFQRACEYLAEILDLQMPTL--------ATPAADMTTESSVELVR 305
Query: 291 DSSVPEPVWDDEETRAFYECLPDL 314
++ + VW+ R FY +P L
Sbjct: 306 NTEDVDMVWESAAERDFYTKIPTL 329
>gi|443923517|gb|ELU42746.1| transcription factor [Rhizoctonia solani AG-1 IA]
Length = 877
Score = 109 bits (272), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 122/465 (26%), Positives = 192/465 (41%), Gaps = 93/465 (20%)
Query: 62 KICSLLHQRYKD-FSPCLIDGLLK-VFFPGK------SGEDLDADRNLKAMKKRSTLKLL 113
+I S H+R+ + ++P L+ L K + P + S E + D + +++R L++
Sbjct: 442 EIVSAFHRRFPEAYTPPLVAILSKELAAPSRTALNSLSSEQREKDEAARIVRQRPLLRVA 501
Query: 114 LELYFIGIIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGL--PLS 170
EL +GII DS + I L D + +L L +F + R FLGL P S
Sbjct: 502 CELAMVGIINDSPGRSGGEWIMKVIRELLVNDPSLGSLPLFTTFLKSYSRPFLGLAPPPS 561
Query: 171 GP---------------GQEIYEEFFKGLNITADQKKI--------FKKAFHTYYNAVQE 207
QE G I +Q+++ FK+ YY V +
Sbjct: 562 AKQVGADVEAGELSSTVAQESTNGVSNGATILNEQEELVEKDIRDKFKRMCEGYYENVAK 621
Query: 208 LLQAEH--TSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQ 265
L EH + L+ + N + GE+ E+ +YEK+ KSY+ L + SL++ L +
Sbjct: 622 KLVKEHNVSRLQDQDRRNHEAYIKSGEIFEDRQQAYEKMTKSYEKLLSSCQSLSDLLYLP 681
Query: 266 PPVMPE-----------DVHTTRVTSGEDASPASGKDSSVPEPVWDDEETRAFYECLPDL 314
P +P D ++ G + PA+ K W+DEE R FYE LPDL
Sbjct: 682 MPHLPSASQKNDSILLLDGSSSLRLGGTEDLPANSK--------WEDEEERRFYEDLPDL 733
Query: 315 RAFVPAVLLG-EAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDTAEVSADLGASPEGKS 373
+ FVP +LG +A E EQ D +E + + +D A + A L
Sbjct: 734 KDFVPKTVLGVDAVASKEERDSVAKEQVNDADAEKAKEEQEKRDVARLEARL-------- 785
Query: 374 VEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEKDTERKVETEKEKL 433
E D E AK + +++ + R +
Sbjct: 786 ----------------------------ENVDGEDAKTTVSDDAEDQPSSRSPSPTQGAA 817
Query: 434 KGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVR 478
G L ALL RL +R +ID++ V F +LNSK++RKRL++
Sbjct: 818 TGASQV-LAALLARLSDANNRTVIDEIAVNFAFLNSKASRKRLIK 861
>gi|406606376|emb|CCH42150.1| Nonsense-mediated mRNA decay protein 2 [Wickerhamomyces ciferrii]
Length = 971
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 158/323 (48%), Gaps = 19/323 (5%)
Query: 457 IDQLTVEFCY--LNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQ 514
ID T+EF L K+++ RL++ + + Y+R + + + ++ L++
Sbjct: 357 IDDATLEFWNQGLIGKASKNRLLKHF--TTTKDIGRVRVYARFLKSSDPHLGNLKDELLE 414
Query: 515 MLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTH-HNID 573
L+ F I + +N +NI F E+ KF + P ++F +++ + + T +NI+
Sbjct: 415 YLDRGFRSQI-YHNGLNF----KNIMFFCEMIKFGLVPEHVIFHKIRSLILNLTTPNNIE 469
Query: 574 VACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERS 633
+ E G++L E + M ML++L + L + + N + + KPP
Sbjct: 470 ILSIFFEISGKYLL--SEHNKLMEEMLDLLQAKRKNDKLTINNKMAISNLFLVLKPPSIK 527
Query: 634 A--RVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRK--LPWSDCESYLLKCFMKVHKG 689
+ SKV P +++ L+ S+L +++ V +R L SD + F K K
Sbjct: 528 SIQNKSKVLKPEQAFLKTLVRSELKHGTLKQVSSIIRSADLNDSDIMDTMSSLFTKPEKI 587
Query: 690 KYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELY 749
Y I L++ + L R +F + VVD +LE I GLE+NDY + R+AH++++ E+
Sbjct: 588 NYENITLLSDILKNLRR---DFKIHVVDTILEGIIRGLEINDYRYNRIRMAHVKYISEIC 644
Query: 750 NYEHVDSSVIFDTLYLILVFGHG 772
+ ++ S+I D LY IL FGH
Sbjct: 645 ERKIINVSLIHDLLYKILTFGHA 667
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 64/311 (20%), Positives = 135/311 (43%), Gaps = 32/311 (10%)
Query: 31 KSNCICKYIANIYIYTYTLLLGLW--LTLVYFLKICSLLHQRY-KDFSPCLIDGL-LKVF 86
K+ + KY++ I I + LL + + ++I S LHQR+ K+F+P L + L++
Sbjct: 51 KTLSLTKYLSEIIISSQEGLLKCTKSIDVPSAIEIISALHQRFNKEFTPHLFGWMFLQIQ 110
Query: 87 FPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIGIIEDSSIFINIIKDLTSIEHLKDRDT 146
P ++ D + +K ++ L+E +G+ N K++ + +
Sbjct: 111 VPKTELDEKDEKERISKVK--LIIRFLVEFESVGLF-------NGFKNVEPLPQFMSQRA 161
Query: 147 TQTNLTLLASFARQG---RIFLGLPLSGPGQEIYEEFFKGLNITADQKKIFKKAFHTYYN 203
+ N L+ + ++ ++ +GL +S I F K + + ++Y
Sbjct: 162 AR-NEGLIPAVLKESLSYKMKVGLTVS-----IATTFIKRFPKLLETNEELHILLNSYSE 215
Query: 204 AVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYRNVSSLAEALD 263
+ + H ++ ++ +N K G + EE + K + ++ L +
Sbjct: 216 IIISRTKDLHNIVKNLKTKNHKAQVRTGRIVEEIEADLSKAIELFERFKTATDILCPFFE 275
Query: 264 MQPPVMPEDVHTTRVTSGEDASPASGKDSSVPEPVWDDEETRAFYECLPDLRAFVPAVLL 323
++PP +D + + S E+ S KDS + W +EE R FY+ LP+ +P+ ++
Sbjct: 276 IEPPSFTDDDNNDK--SNENESVIVNKDSGI----WANEEDRKFYQVLPE----IPSEVI 325
Query: 324 GEAEHKANEPS 334
A + +N+ S
Sbjct: 326 DSALNSSNDSS 336
>gi|281203312|gb|EFA77512.1| eukaryotic initiation factor 4 gamma [Polysphondylium pallidum
PN500]
Length = 1196
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 155/321 (48%), Gaps = 29/321 (9%)
Query: 28 IKNKSNCICK-YIANIYIYTYTLLLGLWLT------LVYFLKICSLLHQRYKDFSPCLID 80
I NK N + + + N+ YT ++ + + + + +KI S+LHQRY + +
Sbjct: 384 IDNKENLLQEIHQLNLSKYTTEIIPSIVKSSFKPNDIPWIVKIFSMLHQRYDGVDSSVSE 443
Query: 81 GLLKVFFPGK-SGEDLDADRNLKAMKKRSTLKLLLELYFIGIIEDSSIFINIIKDLTSIE 139
L ++F P + + +++RN K K+R+ ++L+++L+++ II S +I +TS
Sbjct: 444 SLFQLFLPLQIQAAEPESERNAKITKRRNAIRLIMDLFYVDIIHTFSPIYKLISKMTSQS 503
Query: 140 HL-KDRDTTQTNLTLLASFARQGRIFLGLPLS-GPG-QEIYEEFFKGLNITADQKKIFKK 196
+D++ L +L +F R +G+ P +IY ++AD++ K+
Sbjct: 504 TFEQDKECGYPVLVVLLNFLRPCTQLIGMSKDRNPNLPDIYSNI-----LSADEQSNTKE 558
Query: 197 AFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYRNVS 256
YY + E +Q E LR E E I+ KGE+ E +SSYE+LR++Y+ L NV+
Sbjct: 559 LIQNYYTKLGEFIQREQQLLRDKEKEMKSIMQMKGEVPETVTSSYEQLRRNYEKLITNVT 618
Query: 257 SLAEALDMQPPVMPEDVHTTRVTSGEDASPASGKDSSVPEPVWDDEETRAFYECLPDLRA 316
S A+ + P T+ + DS W++EE R FYE L
Sbjct: 619 SYADFIGAPLPTNDYTTKLETETTETKSEQLEAFDSP-----WENEEQRQFYEVL----- 668
Query: 317 FVPAVLLGEAEHKANEPSVKP 337
VP L E + ++ P+V+P
Sbjct: 669 -VP--LPKEEKKQSTSPTVQP 686
>gi|146414253|ref|XP_001483097.1| hypothetical protein PGUG_05052 [Meyerozyma guilliermondii ATCC
6260]
Length = 980
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 170/374 (45%), Gaps = 28/374 (7%)
Query: 415 EKGKEKDTERKVET------EKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCY-L 467
E E+D K+ T + +L+ + + ALL +L D + L EF L
Sbjct: 315 ESAAERDFYTKIPTLENLPASETQLEEDAASRMTALLAKLSVAGDED-VSLLVSEFNLGL 373
Query: 468 NSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKK 527
N+K++R+R+ R T+ ++ + + + +I L+++ I
Sbjct: 374 NNKASRQRIRR--LCTESTNFSNFKIVAKFLKMNEQSLGPTINEIIVALDDKLRGQI-YH 430
Query: 528 DQMNIETKIRNIRFIGELCKFKIAPAGLVFSCL-KACLDDFTHHNIDVACNLLETCGRFL 586
D++N R++ F EL KFK+ P +VF + K L+ HN D+ E CGRFL
Sbjct: 431 DKLNF----RSVYFFVELVKFKLIPTHVVFHKIHKLILNIKNIHNTDILAVFFEQCGRFL 486
Query: 587 YRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPE-RSARVSKVRPPLHQ 645
+ M ML++L + KNL + + PPE + R K+ PP Q
Sbjct: 487 LHDTDYRPFMVEMLDLLQSEQKNKNLTIHDKLSIRTLLMMIDPPEVKVERKRKILPPEEQ 546
Query: 646 YIRKLLFSDLDK-----SSIEHVLRQLRKLPWSDCE---SYLLKCFMKVHKGKYGQIHLI 697
++ + ++L +S+ ++ Q WS + S L + F + + IH +
Sbjct: 547 FLLHVFHTELTSAPRTATSVGTIITQCN---WSANQVAYSTLERIFSRPQDVNFDVIHNL 603
Query: 698 ASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSS 757
A + ++ + V VVD +E I GLE++DY +++ RL + +LGEL+N V S
Sbjct: 604 AVVLQRYVKHDRQLLVRVVDTTVENIIRGLEIDDYKIKRDRLCDVLYLGELWNCGLVTSK 663
Query: 758 VIFDTLYLILVFGH 771
++ L+ I+ FGH
Sbjct: 664 LVVTILFTIITFGH 677
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 106/267 (39%), Gaps = 47/267 (17%)
Query: 61 LKICSLLHQRYK-DFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFI 119
L++ + LH R+K +FS GLL +FF G +D ++++R+ L+L++E + I
Sbjct: 97 LEVTTALHTRFKLEFS----SGLLGLFFQG-----IDPTTT-TSIRQRNLLRLMMEFHLI 146
Query: 120 GIIEDSSIFINIIKDL------TSIEHLKDRDTTQTNLTLLASFARQGRIFLGLPLSGPG 173
G+ KD +KD D + + ++ + L G
Sbjct: 147 GLFRTVG---GTTKDALPDRLAKRFAEIKDEDAVVIAVKEVLAY--------DVTLEG-A 194
Query: 174 QEIYEEFFK--GLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKG 231
+ F + G +T K +F Y ++LQ+ ++ N K G
Sbjct: 195 LSVATGFLRRYGEQLTPKLKTLFV----AYAQESFKVLQSVAADTAKLTKANRKKALKVG 250
Query: 232 ELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASG-- 289
+ EE + E+ + Y+ R LAE LD+Q P T T D + S
Sbjct: 251 RILEEENVKLEEQEQLYEKFQRACEYLAEILDLQMP--------TLATPAADMTTESSVE 302
Query: 290 --KDSSVPEPVWDDEETRAFYECLPDL 314
+++ + VW+ R FY +P L
Sbjct: 303 LVRNTEDVDMVWESAAERDFYTKIPTL 329
>gi|221054778|ref|XP_002258528.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
gi|193808597|emb|CAQ39300.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
Length = 1340
Score = 104 bits (259), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 118/501 (23%), Positives = 204/501 (40%), Gaps = 86/501 (17%)
Query: 287 ASGKDSSVPEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPAS 346
SG DS W +EE +AFY P+ + L E E AN +V + ++ A
Sbjct: 563 GSGDDSIC---FWANEEEKAFYTKFPNYSNI--NISLNEEEEDANAANVTSVGNASNAA- 616
Query: 347 EPDQGQLAAQDTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDK 406
D +A G++P + +PD G
Sbjct: 617 --DPSNIAN----------GSNPTD----------------SGNPDNCTGL--------- 639
Query: 407 EKAKDPDKEKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCY 466
E D +KG +K E+ + EK +L D +
Sbjct: 640 EATGRKDPKKGFQKYLEKLLHMNSEK----------------------ELQDHVMTFLLN 677
Query: 467 LNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINK 526
N+K RK + + ++ + L L+P+Y R VA ++ KD++ +++ ++ LI +
Sbjct: 678 YNTKRKRKLVANNITHINQVVLNLIPFYCRYVAIINVYRKDMAVTIVEEVKRITEKLIKE 737
Query: 527 KDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFL 586
K K + I++I EL KFK+ + L ++FT + ++ +LE C L
Sbjct: 738 KLPCQ-NKKNKCIKYICELAKFKLLDITYILDVLHLLSENFTSDHAELCLYILENCSLLL 796
Query: 587 YRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYL----CKPPERSARV------ 636
+ +T IR N+L+ + ++K+ KNL L E Y C P +++ +
Sbjct: 797 INNAKTHIRFINLLQKIKKMKSSKNLSTSFDLLFEECYIKIEQECDPKKKNLKKNKIKSK 856
Query: 637 -SKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDC------ESYLLKCFMKVHKG 689
SK +++KLLF D++K S+E + +RK W D Y+ K M +
Sbjct: 857 YSKENLKKKNFLKKLLFDDIEKISVEEISTHMRKFNWDDVFFTSLLRKYIFKFLMYM--- 913
Query: 690 KYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELY 749
QI +ASL ++ + F ++DE+ E I +E ND+ + + EL+
Sbjct: 914 SIYQISNLASLLFYIAMHRPYFVTQIIDELYERIVHIIERNDFKKFSLLIQYAHLFSELF 973
Query: 750 NYEHVDSSVIFDTLYLILVFG 770
Y + SS + D LY ++
Sbjct: 974 VYRMLSSSSVLDMLYFLVALS 994
>gi|402224254|gb|EJU04317.1| ARM repeat-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 1110
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 143/298 (47%), Gaps = 32/298 (10%)
Query: 61 LKICSLLHQRY-KDFSPCLIDGLLKVF--------FPGKSGEDLDADRNLKAMKKRSTLK 111
+++ S H+R+ K+F+P + LL + PG+S E + + + ++R L+
Sbjct: 104 VEVISAFHRRFPKNFTPAVDSSLLAILAPPAKVNAVPGQSAEQKEKEDVARITRQRPVLR 163
Query: 112 LLLELYFIGII--EDSSI-----FINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRI 163
+ EL +G+ ED + I +++DL S D + ++L LL +F + R
Sbjct: 164 ICAELGMVGVWRSEDGTKSGGEGVIKLLRDLLS------HDPSLSSLPLLITFVKSFARP 217
Query: 164 FLGLPLS------GPGQEIYEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLR 217
+LG P + E+ +G + + ++ ++ YY+ V + L H L+
Sbjct: 218 YLGTNAGEAAAEPTPSEAQVEDHEQGELVERETREKLRRMTENYYDTVSKKLVQAHLKLQ 277
Query: 218 QMENENAKILNAKGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMP-EDVHTT 276
+ + +N + GE+ E+ +YEK+ K+Y+ L +V SL+E L + P +P E H+
Sbjct: 278 EQDRKNHEAYIRSGEIFEDRQQAYEKMTKNYEKLLSSVQSLSEVLSLPMPDLPKESGHSE 337
Query: 277 RVTSGEDASPASGKDSS--VPEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANE 332
+ G+ G D W+DEE R FYE + DL+ +VP +LG E K +E
Sbjct: 338 SIILGDQGLSHLGGDDEEWTSTNKWEDEEERRFYEDIIDLKDWVPRSILGIEEEKKDE 395
>gi|260940629|ref|XP_002614614.1| hypothetical protein CLUG_05392 [Clavispora lusitaniae ATCC 42720]
gi|238851800|gb|EEQ41264.1| hypothetical protein CLUG_05392 [Clavispora lusitaniae ATCC 42720]
Length = 1013
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 162/348 (46%), Gaps = 23/348 (6%)
Query: 436 VEGTNLDALLQRLPGCVSRDLIDQLTVEFCYL--NSKSNRKRLVRALFNVPRTSLELLPY 493
EG + +Q L S + +D+LTVEF + +K+ R RL+R F+ R S +
Sbjct: 354 TEGEKVALFVQHLSEASSEEDVDRLTVEFHSMVPYNKATRNRLLR-FFSEIRKS-DNFNI 411
Query: 494 YSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPA 553
Y+R + + ++ + L+++L+ F I+ RN+ F EL KFK+ P
Sbjct: 412 YARFLKINADVFPELLTELVEILDRGFRTQIHHG-----AINFRNLTFFIELVKFKLVPL 466
Query: 554 GLVFSCLKACLDDFTHH-NIDVACNLLETCGRFLYRSPETSIRMANMLEILM------RL 606
+VF ++ D N+DV E CG+FL PE S M+ +L +L
Sbjct: 467 HMVFHKVRRMTMDIGQTGNVDVLSVFYERCGKFLLFEPEYSATATEMIALLKEQSKSDKL 526
Query: 607 KNVKNLDPRHVTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQ 666
+ L R+++L+ +++ K E ++ + + Q +RKL+ S+ + +VL
Sbjct: 527 SVNQKLALRNMSLIVDSFTSVKEIEPEVKMDLMYEFVTQVLRKLIVSN----DLTYVLEL 582
Query: 667 LRKLPWS---DCESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEI 723
L K+ ++ + + L + K ++ L+A L L + + VVD + E +
Sbjct: 583 LSKINFAKDENAQHAFLSVYAKPELMVSDKLELMAELLRRLDKKNAFLITMVVDNLTEGV 642
Query: 724 RLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGH 771
+E NDY R+AHM+ + L+N + + + D L+ I+ F +
Sbjct: 643 IRCMERNDYRQNVTRIAHMKLVAALFNRKVLSFKSVIDLLFKIVCFDY 690
Score = 43.1 bits (100), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 106/255 (41%), Gaps = 26/255 (10%)
Query: 61 LKICSLLHQRYK-DFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFI 119
+ + S LHQR+ F+P + ++ +GE ++ D RS+L+LL+EL F+
Sbjct: 92 VAVISALHQRFPVSFTPQFLSAIV-------NGE-MNKDTETSLATSRSSLRLLMELSFV 143
Query: 120 GIIEDSSIFINIIKDLTSIEHLK---DRDTTQTNLTLLASF-ARQGRIFLGLPLSGPGQE 175
GI + F K L + K +T L LL F + + LP+ +
Sbjct: 144 GI---GTQFSQCDKSLLGPQASKFCTKYETQPIVLPLLKHFMSYRFEDGFALPVVVSLSK 200
Query: 176 IYEEFFKGLN--ITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGEL 233
Y + K N I+ D + + F Y +EL + H+ + ++ ++ K G +
Sbjct: 201 RYGDILKSPNDMISEDARAEILQTFTVYTKRSKELFTSLHSQVARLTQKDFKASIRTGRI 260
Query: 234 SEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASGKDSS 293
+EN + + + N++ L E +++ P + E AS K S
Sbjct: 261 LDENQADLRQKTELEKVFASNMAPLCEIFNVEYP-------SFEPAENEKASEVVVKPSK 313
Query: 294 VPEPVWDDEETRAFY 308
V W+D ++FY
Sbjct: 314 VV-GWWEDAREKSFY 327
>gi|254574468|ref|XP_002494343.1| Nonsense-mediated mRNA decay protein 2 [Komagataella pastoris
GS115]
gi|238034142|emb|CAY72164.1| Nonsense-mediated mRNA decay protein 2 [Komagataella pastoris
GS115]
gi|328353840|emb|CCA40237.1| Nonsense-mediated mRNA decay protein 2 [Komagataella pastoris CBS
7435]
Length = 953
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 164/342 (47%), Gaps = 19/342 (5%)
Query: 441 LDALLQRLPGCVSRDLIDQLTVEFCY--LNSKSNRKRLVRALFNVPRTSLELLPYYSRMV 498
++ LL++L C S +D L + + L K++ K L+R + + ++ + YYSR +
Sbjct: 374 MEKLLEKLDRCKSASDVDSLAIVYFQKGLQCKASDKHLMRHM--LANSNQHPVKYYSRFL 431
Query: 499 ATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFS 558
A ++ + ++ L+++F +N + + +++I F EL KFKI P ++F
Sbjct: 432 AISQPSLRPIKDEIVDFLDKKFRIQLN-----SAKFNLKDIIFFCELIKFKIVPTFIIFH 486
Query: 559 CLKACLDDFTHHN--IDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRH 616
++ + + ++ + + CGR L R E + M M+E++ L +
Sbjct: 487 KIRTLIISLESRSKYFEILSIIFDNCGRVLTREKEYQMMMDEMVELIQELSFSGTRSFQL 546
Query: 617 VTLVENAYYLCKPPERSARVSKVRPPLH-QYIRKLLFSDLDKSSIEHVLRQLRKLPWSDC 675
+ + + + PP+ S R + + + + ++L+ +L+ +SI V + + L +
Sbjct: 547 KSQINDLLMILYPPKASQRSAISKESVQSNFFKQLIRVELNPNSIAVVKKIVASLTFESS 606
Query: 676 ESY--LLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYG 733
E++ L F + + L+A L + F ++VD+++E + +GLE NDY
Sbjct: 607 ETFCTLELLFTQPETLPSDSLQLVAELLQ--TSCPKWFVTSIVDKIMERVSVGLEDNDYK 664
Query: 734 MQQRRLAHMRFLGELYNYEHVDSSVIF---DTLYLILVFGHG 772
M +RLA MR+L EL N + ++ + L IL +G+
Sbjct: 665 MSNKRLADMRYLAELCNAGIFNDHFVYFMVNLLNYILFYGYS 706
>gi|358334565|dbj|GAA27669.2| regulator of nonsense transcripts 2 [Clonorchis sinensis]
Length = 455
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 147/323 (45%), Gaps = 46/323 (14%)
Query: 59 YFLKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYF 118
+ LK+CS +HQRY DFS +D KVF S +D+ ++ K R L L +L
Sbjct: 158 FILKLCSAMHQRYADFSCHFLDAWKKVF---ASYKDI---KHANLSKLRVDLALFADLNT 211
Query: 119 IGIIEDSSIFINIIKDLTSIEHLKDRDTTQ-TNLTLLASFARQ-GRIFLGL---PLSGPG 173
IG+ ++ + LT+ L + D T++ ++ SF R ++GL +
Sbjct: 212 IGVFREAEAMRLLASQLTA---LTNGDMENFTHIGIICSFCRHCSDDWIGLIPRRIRMLS 268
Query: 174 QEIYEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGEL 233
E E + + A+++ + FH Y + LQ R++ N L +GE+
Sbjct: 269 SEFGLEIPRSTFMPAERQAKCRGLFHDYLAGARIHLQTMVKEARRIVAGNRDQLENRGEV 328
Query: 234 SEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPP-----VMPEDVHTTRVTSGEDASPAS 288
SEE ++L S + ++++LA+ LD PP ++ ED+ S D++
Sbjct: 329 SEERQDRADQLVTSCRKFHESLTTLADLLDSDPPPDFSSMIKEDLKA----SCSDSAEPD 384
Query: 289 GKDSSVPEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEP 348
++ V +++DE+TR FYE LPD+RA VP +L E+E ++P
Sbjct: 385 QEEPGVSSQLFEDEDTRLFYESLPDIRAMVPGILYKESEQ-----------------TKP 427
Query: 349 DQGQLAAQDTAEVSADLGASPEG 371
D G+ D+ G PEG
Sbjct: 428 DAGREKHDDSD------GTGPEG 444
>gi|340500025|gb|EGR26931.1| nonsense-mediated mRNA decay factor, putative [Ichthyophthirius
multifiliis]
Length = 702
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 116/239 (48%), Gaps = 5/239 (2%)
Query: 447 RLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMK 506
+L C S++ D L +F Y+N+K NR+RL++ + + L+ Y++R+VA ++ +
Sbjct: 360 KLKFCTSKETADLLAEQFMYVNNKVNRRRLIQDILTNSQQYRHLITYFTRLVAVINLHFQ 419
Query: 507 DVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDD 566
D+ L Q + + L N+++Q + IR I ++ L KF I + + + LK +DD
Sbjct: 420 DIGDYLSQKVND---LLENQQNQKK-QDIIRMILYLNNLTKFGIVESFKILNYLKYYVDD 475
Query: 567 FTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYL 626
F +D C ++ CGRFL+++ T R +++ + L N ++
Sbjct: 476 FHIQQLDFICLIIGECGRFLFKNQNTQFRYQTIVDHFLSLIQNNNQFQNYIQEWVQKNIQ 535
Query: 627 CKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWS-DCESYLLKCFM 684
++ + QY+ +LF L++ + E V L KL W + E YLL F+
Sbjct: 536 QNNQSSQFQIDINLNIIQQYVSYILFVQLNQINFEDVKISLLKLDWDEELELYLLVSFL 594
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 52/107 (48%), Gaps = 6/107 (5%)
Query: 225 KILNAKGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPV---MPEDVHTTRVTSG 281
+++ G +++ + Y+K+R Y LY N++ L + L+ + V + + +
Sbjct: 188 RLIAENGGITDRQEALYQKIRTDYVTLYENLNILCDCLEFEFNVNFAQEKQLKNQQKAQE 247
Query: 282 EDASPASGKDSSVPE---PVWDDEETRAFYECLPDLRAFVPAVLLGE 325
E +D + + +D EE R+FYE + DL++ +P +L E
Sbjct: 248 EQRRKKQEEDELLRKQNASYFDTEEERSFYEEIFDLKSKLPPILFKE 294
>gi|393217486|gb|EJD02975.1| transcription factor [Fomitiporia mediterranea MF3/22]
Length = 1177
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 127/273 (46%), Gaps = 50/273 (18%)
Query: 102 KAMKKRSTLKLLLELYFIGIIEDS------SIFINIIKDLTSIEHLKDRDTTQTNLTLLA 155
+ ++R L++ EL +GII D+ + +KDL S D T ++L LL
Sbjct: 181 RVTRQRPVLRVCAELALVGIIRDAPGKSGGEWMMKTLKDLLS------NDPTLSSLPLLT 234
Query: 156 SFARQ-GRIFLGL-PLSGPGQEIYE---------------EFFKGLNITADQKKI----- 193
+F + R FLG+ P +G +I E + F L ++ ++
Sbjct: 235 TFLKSYARPFLGITPSTGSKAQIPEGTTTDLVAAVARQNADGFPQLGTDGEEDELVEKET 294
Query: 194 ---FKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDH 250
FK+ Y+ +V + L EH L++ + +N + GE+ E+ SYEK+ KSY+
Sbjct: 295 RARFKRMCEGYFESVSKKLVIEHKRLQEQDRKNHEAYIRSGEIFEDRQQSYEKMTKSYEK 354
Query: 251 LYRNVSSLAEALDMQPPVMPEDV--HTTRVTSGEDASPASGKDSSVPE-----PVWDDEE 303
L + +L+E L++ P +P + T + S A+G+ ++ E W+DEE
Sbjct: 355 LLSSCQTLSELLNLPMPTLPAATQKNDTIIVS------AAGQQTTQEEIYVIGGKWEDEE 408
Query: 304 TRAFYECLPDLRAFVPAVLLGEAEHKANEPSVK 336
R FYE + DLR FVP +LG E +P K
Sbjct: 409 ERRFYEDIQDLRDFVPKSVLGLDETDGQQPDEK 441
>gi|413923150|gb|AFW63082.1| hypothetical protein ZEAMMB73_018066 [Zea mays]
Length = 428
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 36/42 (85%), Positives = 41/42 (97%)
Query: 734 MQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHGTAE 775
MQQRRLAHMRFLGELY+Y+H+DSSV+FDTLYLI+VFGHGT E
Sbjct: 1 MQQRRLAHMRFLGELYSYKHIDSSVVFDTLYLIIVFGHGTPE 42
>gi|390357840|ref|XP_003729115.1| PREDICTED: regulator of nonsense transcripts 2-like, partial
[Strongylocentrotus purpuratus]
Length = 258
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 79/138 (57%), Gaps = 8/138 (5%)
Query: 201 YYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYRNVSSLAE 260
+Y+++ + L+ +H L+ ME +N + L KGELSEE +E+ + SY L N S+ A+
Sbjct: 50 HYSSLSKYLERQHKELQNMERQNRRTLQNKGELSEERRKRHEEKQSSYQKLLMNTSTFAD 109
Query: 261 ALDMQPPVMP-EDVHTTRVTSGEDASPASGKDSSVPE-----PVWDDEETRAFYECLPDL 314
LD P +P E++ T + A G D + E +W+D++TR F+E L +L
Sbjct: 110 LLDEDMPDLPVEELTQTELDLM--AIDMMGTDGQLTEFDWANSLWEDDDTRTFHENLINL 167
Query: 315 RAFVPAVLLGEAEHKANE 332
R+ VPA+L + ++ +N+
Sbjct: 168 RSMVPAILFKDTDNTSNQ 185
>gi|156097516|ref|XP_001614791.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148803665|gb|EDL45064.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 1413
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 150/320 (46%), Gaps = 31/320 (9%)
Query: 454 RDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLI 513
++L DQ+ N+K RK + ++ ++ + L L+P+Y R VA ++ KD++ ++
Sbjct: 700 KELEDQVMTFLLNYNTKRKRKLVASSITHINQVVLNLIPFYCRYVAIINVYRKDMALAVL 759
Query: 514 QMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNID 573
+ ++ LI +K K + I+++ EL KFK+ + L ++FT + +
Sbjct: 760 EEVKRITEKLIKEKLPCQ-NKKTKCIKYLCELAKFKLLDITYILDVLHLLNENFTPDHAE 818
Query: 574 VACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPER- 632
++ +LE+C L + +T IR NML+ + ++K+ +NL L E C E+
Sbjct: 819 LSLYILESCSLLLINNSKTHIRFINMLQKIKKMKSSRNLSTSFDLLFEEC---CIKIEQE 875
Query: 633 -------------SARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSD----C 675
++ ++ +++KLLF D+++ +E + +RK W D C
Sbjct: 876 FDPNKKNLKKKKTKSKYTEENQKKKNFLKKLLFHDIEEVPVEEISTHMRKFNWDDLFFTC 935
Query: 676 --ESYLLK--CFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELND 731
Y+ K +M ++ QI +ASL ++ + F V+DE+ E I +E ND
Sbjct: 936 LFRKYIFKFLAYMSIY-----QIGSLASLLFYIAMHRPCFVTQVIDELYERIVHIIERND 990
Query: 732 YGMQQRRLAHMRFLGELYNY 751
+ + + EL+ Y
Sbjct: 991 FKRFNLLIQYAHLFSELFIY 1010
>gi|340058826|emb|CCC53196.1| conserved hypothetical protein, fragment [Trypanosoma vivax Y486]
Length = 1453
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 117/249 (46%), Gaps = 10/249 (4%)
Query: 490 LLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQM---NIETKIRNI-RFIGEL 545
+L + +R A L+ DV L + ++ ++ + ++ + NI R++ +L
Sbjct: 629 MLRFMARCAALLNQYFPDVGEFLAEDIKCQWKMACGASSAVCDETVQMHVTNIVRYLCDL 688
Query: 546 CKFKIAPAGLVFSCLKACLDDFTHH-NIDVACNLLETCGRFLYRSPETSIRMANMLEILM 604
KF + P+ VF L+A ++D H ++ +++ G FL R+ T M+ +L+ L
Sbjct: 689 TKFDVVPSSCVFGILRAAIEDLRHRCSVSAITTIMQHGGLFLSRNRATRSAMSKLLDKLK 748
Query: 605 RLKNVKNLDPRHVTLVENAYYLCKPPERSARVSKVR--PPLHQYIRKLLFSDLDKSSIEH 662
L + L++++ KPP+ + PL Y+R L+ L S ++
Sbjct: 749 EASRETGLKGESLRLIKSSLAFLKPPQPQQQPVAQAVQTPLEMYVRHLMSDVLSPSKLDF 808
Query: 663 VLRQLRKLPWSD--CESYLLKCFMKVHKGKYGQIHLIASLTAGLSRY-HDEFAVAVVDEV 719
V +L K+PW+D L + +V++ K+ I L A + + L+R + + + D V
Sbjct: 809 VYEKLLKMPWNDPPTREMLTRVLRQVYRLKWDNIPLFADMLSALARSGYSSVVLCIADAV 868
Query: 720 LEEIRLGLE 728
E++R LE
Sbjct: 869 AEDMRRDLE 877
>gi|242211857|ref|XP_002471765.1| predicted protein [Postia placenta Mad-698-R]
gi|220729191|gb|EED83070.1| predicted protein [Postia placenta Mad-698-R]
Length = 520
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 139/317 (43%), Gaps = 55/317 (17%)
Query: 62 KICSLLHQRY-KDFSPCLIDGLLKVFFPGKSG-------EDLDADRNLKAMKKRSTLKLL 113
+I SLLH+R+ K ++P L+ L P E + + + + ++R L++
Sbjct: 105 EIISLLHRRFPKSYTPGLVSALSAALAPPSRAILSALAPEQREKEDSARISRQRPILRVC 164
Query: 114 LELYFIGIIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGLPLSGP 172
EL +GII+D+ + +++ L D T ++L LL++F + R +LGL
Sbjct: 165 AELALVGIIKDAPGRSGGEWVMKTLKDLLSNDPTLSSLPLLSTFLKTFARPYLGLVPPAS 224
Query: 173 GQEIYEEFFKGL---------NITA-----------------DQKKIFKKAFHTYYNAVQ 206
++I G N TA D + FKK Y+ V
Sbjct: 225 TKQIPSSSEPGTLSSAATTEANGTAGGGFPPIGKEEDELVEKDIRDRFKKMCEGYFENVS 284
Query: 207 ELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQP 266
+ L EH L++ + N + GE+ E+ +YEK+ KSY+ L + +L+E L +
Sbjct: 285 KKLVQEHNRLQEQDRRNHEAYIRSGEIFEDRQQAYEKMTKSYEKLIASCQTLSELLYLPM 344
Query: 267 PVMPEDVHTT-----------RVTSGEDASPASGKDSSVPEPVWDDEETRAFYECLPDLR 315
P + + + SGE S A GK W+DEE R F+E +PDL+
Sbjct: 345 PTLKTTTQKSESIQIGVNTGLNLPSGEAESVAGGK--------WEDEEERRFFEDIPDLK 396
Query: 316 AFVPAVLLG-EAEHKAN 331
+VP +LG E E N
Sbjct: 397 DYVPRSVLGVEGESDEN 413
>gi|82539404|ref|XP_724092.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23478621|gb|EAA15657.1| TAP1 protein [Plasmodium yoelii yoelii]
Length = 1359
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 155/359 (43%), Gaps = 23/359 (6%)
Query: 299 WDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDT 358
W+ E + FY P+ + L + E+ + + + + D + D
Sbjct: 590 WNSLEEKKFYTVFPEYSNI--NINLNDDENDEDGKNGEDGKNGEDGKNGEDGKNGEDGKN 647
Query: 359 AEVSADLGASPEGKSVEKGKDKEE-KEKEKAKDPDKEKG--KGKDKEE-KDKEKAKDPDK 414
E D +GK+ E GK+ E+ K E K+ + K GK+ E+ K+ E K+ +
Sbjct: 648 GE---DGKNGEDGKNGEDGKNGEDGKNGEDGKNGEDGKNGEDGKNGEDGKNGEDGKNGED 704
Query: 415 EKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRK 474
K E + K + +K L + + +DL + + + N+K RK
Sbjct: 705 GKNGEDGEDDKNDDVLKKKTNKHNEFLSYTNKIININNEKDLENMVMIFLLNYNTKKKRK 764
Query: 475 RLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMN--- 531
+ + + + ++ L+P+Y R +A ++ KD+ ++I L+ I +KD N
Sbjct: 765 IIATKITYLNKITINLIPFYCRYIAIVNKYNKDICLIVIDELKR-----IIEKDIKNKLP 819
Query: 532 -IETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSP 590
K++ I++I EL KFK+ + L + +FTH + ++ +LE L +
Sbjct: 820 CQNKKMKCIKYICELVKFKLLDMSYILDVLNLLIKNFTHDHAELCFYILENSAILLVSNS 879
Query: 591 ETSIRMANMLEILMRLKNVKNLDPRHVTLVENA-----YYLCKPPERSARVSKVRPPLH 644
+T IR +LE L ++KN KN+ + E + YL + +++ +S ++
Sbjct: 880 KTHIRFLYILEKLKKIKNTKNISSSLENIFEESCIRVKKYLTEKTKKNMSISNKNEDIN 938
>gi|261334611|emb|CBH17605.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 1460
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 159/661 (24%), Positives = 255/661 (38%), Gaps = 103/661 (15%)
Query: 115 ELYFIGIIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQGRIFLGLPLSGPGQ 174
+++F+G S+ + T + D + Q + L A+ R RI G+ S +
Sbjct: 309 DIFFVG----SAGVRRVFNPTTKTSDVVDEASLQQAVELSAARLRCVRIMPGMYDSTDAE 364
Query: 175 EIYEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELS 234
+ E+FF L +T K+ K++ + ++E Q L + + ++ E
Sbjct: 365 K--EQFF-ALAVTTS--KVALKSYLWHKTKLEEWWQL----LGEQRDTRGNVVKTSTE-- 413
Query: 235 EENSSSYEKLRKSYDHLYRNVSSLAEALD-MQPPVMPEDVHTTRVTSGEDASPASGKDSS 293
+ L + + L+ +L L PP + V RV G + A+ K +
Sbjct: 414 ---DMQFRALAEQVERLHVTCDNLLGMLGYATPPPVKLTVLEPRVAKGIVVTSATKKFYA 470
Query: 294 VPEP----VWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPD 349
V ++ +E R FYE +PD +L K PS L +
Sbjct: 471 VSAAETLNRFESDEQRIFYEYVPDFLIISDELLKSLLSEK---PSWDSLGR--------- 518
Query: 350 QGQLAAQDTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKA 409
QG LA A V+ D EK+ K KE+G+GKD +
Sbjct: 519 QGVLAQSPCAGVT----------------DAREKKAHK----RKEEGEGKDTASNSDTRC 558
Query: 410 KDPDKEKGKEKDTERKVETEKEK-----LKGVEGTNLD------ALLQRLPGCVSRDLID 458
+ + KV T E+ V T D LL+ L C S D ID
Sbjct: 559 VGESRSP-----SYMKVSTTVERRLWLAWLAVPATLFDEYAVVLQLLEELEQCRSADAID 613
Query: 459 QLTVEFCY-----LNSKSNRKRLVRALFNVPRTSL-------------ELLPYYSRMVAT 500
+ V++ L S L F R L +++PY SR +A
Sbjct: 614 KWCVQYMQEALRPLEHSSGSVALGSVFFTNCRMLLAMEVWYSPWVQQPDMVPYLSRCIAE 673
Query: 501 LSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRN-----IRFIGELCKFKIAPAGL 555
S D+S + L+ + L K D E K+R+ +R+I +L KF
Sbjct: 674 FSQYFPDMSEFIAGRLDAHWKSLC-KADSGISEEKLRDQVEGTVRYICDLTKFGAIAHLA 732
Query: 556 VFSCLKACLDDFTHHNID--VACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLD 613
VFS L+ ++D H I + ++++ CG FL R+ T L L + L+
Sbjct: 733 VFSVLRVGMEDL-HGRISPYLISSVMKYCGFFLSRNQTTRQPFNKALGKLESALSKTTLN 791
Query: 614 PRHVTLVENAYYLCKPPERSAR-VSKV-RPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLP 671
L+ + P R V++V R PL Y+R LL L + + V +L K+P
Sbjct: 792 DEGSDLIRASLDFLHVPSAPRRPVAQVERSPLELYVRHLLNDVLSRQKYKFVCEKLVKVP 851
Query: 672 WSDC--ESYLLKCFMKVHKGKYGQIHLIASLTAGLSRY-HDEFAVAVVDEVLEEIRLGLE 728
W D + L+ V K+ I L+A L A L R H+ + +V+ V E++R LE
Sbjct: 852 WEDPAKRNGLVATLRDVQHLKWDNIPLLADLLADLGRAGHESLVLRIVETVAEDLRRDLE 911
Query: 729 L 729
+
Sbjct: 912 V 912
>gi|123476413|ref|XP_001321379.1| MIF4G domain containing protein [Trichomonas vaginalis G3]
gi|121904204|gb|EAY09156.1| MIF4G domain containing protein [Trichomonas vaginalis G3]
Length = 950
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 135/330 (40%), Gaps = 19/330 (5%)
Query: 457 IDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQML 516
ID L + +++ +RK+L+ N+ + Y +R VA +S +V + + L
Sbjct: 395 IDTLARHYHLIDTPEDRKKLIELFSNINKNKGNQARYLARFVADISQVFTEVGQEISENL 454
Query: 517 EEEFNFLI----NKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNI 572
+E+ I + + + +K+ R+I EL FKI F C+ LD F
Sbjct: 455 FDEYKRFILAASSPRIASQVASKLHLARYIAELAHFKIGIEEY-FKCIDFTLDKFRPRTA 513
Query: 573 DVACNLLETCGRFL-YRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPE 631
++ C L+ G+F +T + ++E L K+ + +VE PPE
Sbjct: 514 EMLCTLINIAGKFFDSYCDQTHTNIRRVIEELSARKSEIATHQYALMMVEQTINSIIPPE 573
Query: 632 RSARVSKVRPPLHQYIRKLLFSDLDKSSIE------HVLRQLRKLPWSDCES-----YLL 680
A +++Y L++ + K+ IE ++R + KL ++ ++
Sbjct: 574 VEAEPVFYSNAVNEYQAFLIY--VFKNEIETEAKPKKLIRYIEKLLIKPEKTKIDLTFIF 631
Query: 681 KCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLA 740
K + + Q+ +A+ A S+ + F + V D V E I LE +QR +
Sbjct: 632 KLVLDFNSFSAAQLTQLANFVAEFSKLYPNFGIQVADIVSERIHRFLECPSTNYKQRLVM 691
Query: 741 HMRFLGELYNYEHVDSSVIFDTLYLILVFG 770
RFL EL V + + IL F
Sbjct: 692 ESRFLAELAVKNVVSYEDVLKFMNFILSFN 721
>gi|71755601|ref|XP_828715.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70834101|gb|EAN79603.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 1454
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 123/472 (26%), Positives = 183/472 (38%), Gaps = 80/472 (16%)
Query: 299 WDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQDT 358
++ +E R FYE +PD +L K PS L + QG LA
Sbjct: 480 FESDEQRIFYEYVPDFLTISDELLKSLLSEK---PSWDSLGR---------QGVLAQSPC 527
Query: 359 AEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGK 418
A V+ D EK+ K KE+G+GKD + +
Sbjct: 528 AGVT----------------DAREKKAHK----RKEEGEGKDTASNSDTRCVGESRSP-- 565
Query: 419 EKDTERKVETEKEK-----LKGVEGTNLD------ALLQRLPGCVSRDLIDQLTVEFCY- 466
+ KV T E+ V T D LL+ L C S D ID+ V++
Sbjct: 566 ---SYMKVSTTVERRLWLAWLAVPATLFDEYAVVLQLLEELEQCRSADAIDKWCVQYMQE 622
Query: 467 ----LNSKSNRKRLVRALFNVPRTSL-------------ELLPYYSRMVATLSTCMKDVS 509
L S L F R L +++PY SR +A S D+S
Sbjct: 623 ALRPLEHSSGSVALGSVFFTNCRMLLAMEAWYSPWVQQPDMVPYLSRCIAEFSQYFPDMS 682
Query: 510 SMLIQMLEEEFNFLINKKDQMNIETKIRN-----IRFIGELCKFKIAPAGLVFSCLKACL 564
+ L+ + L K D E K+R+ +R+I +L KF VFS L+ +
Sbjct: 683 EFIAGRLDAHWKSLC-KADSGISEEKLRDQVEGTVRYICDLTKFGAIAHLAVFSVLRVGM 741
Query: 565 DDFTHHNID--VACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHVTLVEN 622
+D H I + ++++ CG FL R+ T L L + L L+
Sbjct: 742 EDL-HGRISPYLISSVMKYCGFFLSRNQTTRQPFNKALGKLESALSKTTLYDEGSDLIRA 800
Query: 623 AYYLCKPPERSAR-VSKV-RPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSDC--ESY 678
+ P R V++V R PL Y+R LL L + + V +L K+PW D +
Sbjct: 801 SLDFLHVPSAPRRPVAQVERSPLELYVRHLLNDVLSRQKYKFVCEKLVKVPWEDPAKRNG 860
Query: 679 LLKCFMKVHKGKYGQIHLIASLTAGLSRY-HDEFAVAVVDEVLEEIRLGLEL 729
L+ V K+ I L+A L A L R HD + +V+ V E++R LE+
Sbjct: 861 LVATLRDVQHLKWDNIPLLADLLADLGRAGHDSLVLRIVETVAEDLRRDLEV 912
>gi|389738707|gb|EIM79903.1| ARM repeat-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 1173
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 136/307 (44%), Gaps = 49/307 (15%)
Query: 62 KICSLLHQRY-KDFSPCLIDGLLKVFFP-------GKSGEDLDADRNLKAMKKRSTLKLL 113
++ S LH+R+ K F+P LI L P G + E + + + ++R L++
Sbjct: 103 EVISALHRRFPKTFTPALIGHLAVALAPASKATLAGMAPEQREKEEAARVQRQRPILRVC 162
Query: 114 LELYFIGIIEDS------SIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQGRIFLGL 167
EL +GII D+ I ++DL S + T T L S+AR FLGL
Sbjct: 163 AELALVGIIRDAPGRSGGEWMIKALRDLLSNDSSLSSLPLLT--TFLKSYARP---FLGL 217
Query: 168 ---------------PLSGPGQEIYEEFFKGLNITADQ------KKI---FKKAFHTYYN 203
LSG +++ AD+ K+I FKK Y++
Sbjct: 218 TPPATKQVSASSENGSLSGETAAMHQNGAFPALADADEADELVEKEIRDRFKKMCEGYFD 277
Query: 204 AVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYRNVSSLAEALD 263
+V + L EH L++ + N + GE+ E+ +YEK+ K+Y+ L + +L+E L
Sbjct: 278 SVAKKLVIEHKRLQEQDRRNHEAYIRSGEIFEDRQQAYEKMTKNYEKLLASCQTLSELLY 337
Query: 264 MQPPVMPEDVH-TTRVTSGEDASPASGKDSSVPEPV-----WDDEETRAFYECLPDLRAF 317
P +P TT + G ++S D + + W+DEE R F+E + DLR
Sbjct: 338 TPLPSLPTSSQTTTSIQIGTNSSSLLNSDETDEITLGITSKWEDEEERRFFEDIQDLREL 397
Query: 318 VPAVLLG 324
VP +LG
Sbjct: 398 VPRSILG 404
>gi|124507062|ref|XP_001352128.1| conserved Plasmodium protein, unknown function [Plasmodium falciparum
3D7]
gi|23505158|emb|CAD51939.1| conserved Plasmodium protein, unknown function [Plasmodium falciparum
3D7]
Length = 1754
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 70/128 (54%), Gaps = 9/128 (7%)
Query: 646 YIRKLLFSDLDKSSIEHVLRQLRKLPWSDC------ESYLLKCFMKVHKGKYGQIHLIAS 699
+++KLLF D++ E + + +RK W+D + Y+ K M + QI+ +AS
Sbjct: 1231 FLKKLLFEDIEYKDTEIICKYIRKFNWNDSFFLYILKKYIFKYLMYM---SIYQINNLAS 1287
Query: 700 LTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVI 759
L L++Y +F + ++DE+ E+I LE ND+ + + +LYNY+ ++S+ +
Sbjct: 1288 LLYQLAKYKPQFVIHIIDELYEKIINTLESNDFKQYTFLIQYTHLFADLYNYKILNSTNV 1347
Query: 760 FDTLYLIL 767
D LY ++
Sbjct: 1348 LDLLYYLI 1355
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 79/146 (54%), Gaps = 3/146 (2%)
Query: 468 NSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKK 527
N+K RK + + + + +L L+PYY R + ++ KD+ ++I L++ +I K
Sbjct: 1011 NTKKKRKIIANNIIYINKVTLNLIPYYCRYICIINKYAKDMYPIIIDELKKITEKII--K 1068
Query: 528 DQMNIETK-IRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFL 586
+++ E K + I+++ EL KFK+ + + +D+FT + ++ +LE C L
Sbjct: 1069 EKVPCENKKTKCIKYVCELTKFKLLDLSYILDIISILIDNFTIEHAELCFFILENCSFLL 1128
Query: 587 YRSPETSIRMANMLEILMRLKNVKNL 612
+P T IR N+ E L ++KN KNL
Sbjct: 1129 LNNPRTHIRFLNLFEKLKKIKNTKNL 1154
>gi|409044623|gb|EKM54104.1| hypothetical protein PHACADRAFT_257716 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1079
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 137/316 (43%), Gaps = 58/316 (18%)
Query: 61 LKICSLLHQRY-KDFSPCLIDGLLKVF-FPGKSG------EDLDADRNLKAMKKRSTLKL 112
+++ S LH+R+ F+P LI P K+ E + + + ++R L++
Sbjct: 37 VEVISALHRRFPTTFTPALISAFSAALTAPSKAAMAALNQEQREKEDTARVTRQRPVLRV 96
Query: 113 LLELYFIGIIEDS------SIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFL 165
EL +GII DS + ++++L S D T ++L LL++F + R +L
Sbjct: 97 CAELALVGIIRDSPNRSGGEWIMKVVRELLS------NDPTLSSLPLLSTFLKPYSRPYL 150
Query: 166 GLPLSGPGQEIYEEFFKGL---------------NITA-----------------DQKKI 193
GL ++I G NI A D +
Sbjct: 151 GLVPPSSSKQISAASEPGTLSEVTTKEANAKEDGNILANGSAAPAIKEEDELVEKDIRDR 210
Query: 194 FKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYR 253
FKK Y++ V + L EH L++ + N + GE+ E+ +YEK+ KSY+ L
Sbjct: 211 FKKMCEGYFDNVCKKLVIEHNRLQEQDRRNHEAYIRSGEIFEDRQQAYEKMTKSYEKLLA 270
Query: 254 NVSSLAEALDMQPPVMPEDVHTT-RVTSGEDASPASGKDSSVPEPV----WDDEETRAFY 308
+ +L+E L + P + H + G + G DS + + + W+DEE R F+
Sbjct: 271 SCQTLSELLYLPVPKLQTASHKADSIQIGSNTGSLLGADSELNDDIRGGKWEDEEERRFF 330
Query: 309 ECLPDLRAFVPAVLLG 324
E + DL+ +VP +LG
Sbjct: 331 EDIIDLKDYVPRGVLG 346
>gi|324503141|gb|ADY41369.1| Regulator of nonsense transcripts 2 [Ascaris suum]
Length = 1066
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 119/281 (42%), Gaps = 24/281 (8%)
Query: 61 LKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
+ IC L Y +F P L+ LK P K +D+ K R L+LL EL G
Sbjct: 99 VTICVQLSSLYAEF-PSLLLAELKKVLPTKR-----SDKIANPSKLRLDLRLLCELCLHG 152
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGLPLSGPGQEIYEE 179
+ + ++ S L D+ + N+ +L S + G GL QE E
Sbjct: 153 VFAKDGV--QVLGSTISYLTLTDK-SEHVNVPILLSLCKALGADVFGLHPYSIKQEADE- 208
Query: 180 FFKGLNITA------DQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGEL 233
G+ + A +QK+IF + Y + + + E + ++ + +G+
Sbjct: 209 --AGMELKAVDVFLPEQKRIFAQLLLDYRKTLIDHVNKELAEMNRLLRSIKRQTRTRGDA 266
Query: 234 SEENSSSYEKLRKSYDHLYRNVSSLAEAL--DMQPPVMPEDVHTTRVTSGEDASPASGKD 291
S E + E+ R+ Y+ +N L+EAL +M+ V + S + A +
Sbjct: 267 SAEERARLEETRQRYEKQQQNAVQLSEALGVEMERMVEEQSEDEEEEISTMEMGRALNEG 326
Query: 292 SSVPEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANE 332
+ VW DE+TR FYE +LR VPA+L E+E + E
Sbjct: 327 TL---SVWPDEDTRQFYESRMELRHMVPAILFQESEQRTLE 364
>gi|389583096|dbj|GAB65832.1| hypothetical protein PCYB_073340 [Plasmodium cynomolgi strain B]
Length = 486
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 127/336 (37%), Gaps = 52/336 (15%)
Query: 297 PVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPT-------------- 342
P W +E+ +AFY PD ++L E E + +V +
Sbjct: 153 PFWANEQEKAFYTKFPDYSNI--NIVLNEDEEDGSIANVSSTANASIADNASNPANAANP 210
Query: 343 ------DPASEPDQGQLAAQDTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKG 396
AS P A S AS G + G A P
Sbjct: 211 GNAATPGNASNPTN----ASSPGNASNPTNASSPGNAATPG---NASNPTNASSPGNAAN 263
Query: 397 KGKDKEEKDKEKAKDPDKEKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDL 456
E + D +KG K E+ + EK +L
Sbjct: 264 CANCANSAVLEASARKDPKKGFPKYLEKLLHMNSEK----------------------EL 301
Query: 457 IDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQML 516
D + N+K RK + ++ ++ + L L+P+Y R VA ++ KD++ +I+ +
Sbjct: 302 EDHVMTFLLNYNTKRKRKLVANSITHINQVVLNLIPFYCRYVAIINVYRKDMAVTIIEEI 361
Query: 517 EEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVAC 576
+ LI +K K + I++I EL KFK+ + L ++FT + +++
Sbjct: 362 KRITEKLIKEKLPCQ-NKKTKCIKYICELAKFKLLDITYILDVLHLLNENFTSDHAELSL 420
Query: 577 NLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNL 612
+LE C L + +T IR ++L+ + ++K+ +NL
Sbjct: 421 FILENCSLLLINNSKTHIRFISLLQKIKKMKSSRNL 456
>gi|70949380|ref|XP_744106.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56523917|emb|CAH78290.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 818
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 9/163 (5%)
Query: 454 RDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLI 513
+DL + + + N+K RK + L + + L L+P+Y R +A L+ KD+ ++I
Sbjct: 630 KDLENMVMIFLLNYNTKKKRKIIATKLIYLNKIILNLIPFYCRYIAILNKYTKDICLIII 689
Query: 514 QMLEEEFNFLINKKDQMN----IETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTH 569
L+ I +KD N K + I++I EL KFK+ V L +++FT
Sbjct: 690 DELKR-----IIEKDVKNKLPCQSKKTKCIKYICELVKFKLLDMSYVLDILNLLIENFTQ 744
Query: 570 HNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNL 612
++++ +LE L + +T IR +LE L ++KN KN+
Sbjct: 745 DHLELCFYILENSSILLVSNSKTHIRFLYILEKLKKIKNTKNI 787
>gi|168048187|ref|XP_001776549.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672140|gb|EDQ58682.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 275
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 64/138 (46%), Gaps = 44/138 (31%)
Query: 501 LSTCMKDVSSMLIQMLEEEFNF----------LINKKDQMNIETKIRNIRFIGELCKFKI 550
L++C + + I L+EEF F LI +DQ+ I++K RN+ F+ + K K
Sbjct: 19 LASCSLSLDAFTI--LQEEFYFMKKSSRRKQALILFEDQIYIKSKSRNVGFLDDFAKLKS 76
Query: 551 APAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVK 610
P L + PETS+R + EI+MRLKNV
Sbjct: 77 LPK--------------------------------LPKLPETSLRQGYVFEIIMRLKNVN 104
Query: 611 NLDPRHVTLVENAYYLCK 628
NLD RH TL ENA+Y C+
Sbjct: 105 NLDDRHCTLGENAHYPCE 122
>gi|294946790|ref|XP_002785168.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239898729|gb|EER16964.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 209
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 69/141 (48%), Gaps = 12/141 (8%)
Query: 193 IFKKAFHTYYN-AVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHL 251
I K Y N AV +L H + E N ++ KG + EN+S Y L +++ L
Sbjct: 40 IVKAIVKFYTNFAVPQLYPVAHEQMLAQEQFNTRMRVDKGTVDAENASKYSSLATAFEKL 99
Query: 252 YRNVSSLAEALDMQPPVMP--EDVHTTRVTSGEDASPASGKDSS-------VPEPVWDDE 302
++ S+AE LD+ PP +P E TR+T S S KD + + +W D+
Sbjct: 100 STHLKSIAEILDLPPPKLPGEETESKTRLTGPTQES--SKKDEGGLSEQERMLQLLWVDD 157
Query: 303 ETRAFYECLPDLRAFVPAVLL 323
R+FYE L DL + +P VLL
Sbjct: 158 SDRSFYEDLYDLESRLPPVLL 178
>gi|156324950|ref|XP_001618521.1| hypothetical protein NEMVEDRAFT_v1g5094 [Nematostella vectensis]
gi|156199202|gb|EDO26421.1| predicted protein [Nematostella vectensis]
Length = 208
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 84/169 (49%), Gaps = 16/169 (9%)
Query: 63 ICSLLHQRYKDFSPCLIDGLLKVF--FPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIG 120
ICSL HQRY++FS L L+KVF + GK D DR + R TL+LL EL G
Sbjct: 47 ICSLFHQRYQEFSDLLKKELVKVFENYAGK-----DEDRAANVTRYRVTLRLLGELILCG 101
Query: 121 IIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGLPLSGPGQEIYEE 179
+ E+ + I ++ + + D++ + + ++ SFA+ G F G+ LS + + E+
Sbjct: 102 VFENLNENIKLLGGILNNIANCDKE-SHIYVQVIISFAKHCGEDFAGV-LSRKHRALVEK 159
Query: 180 F-----FKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENEN 223
+ G+ I D + F+ +YY + + L H L+ E +N
Sbjct: 160 HNITWPYTGI-IPRDAQASFRHLLQSYYKTLAKHLLQVHKDLQNRERQN 207
>gi|336371714|gb|EGO00054.1| hypothetical protein SERLA73DRAFT_88877 [Serpula lacrymans var.
lacrymans S7.3]
gi|336384473|gb|EGO25621.1| hypothetical protein SERLADRAFT_448582 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1128
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 130/304 (42%), Gaps = 45/304 (14%)
Query: 61 LKICSLLHQRYK-DFSPCLIDGLLKVFFPGKSG-------EDLDADRNLKAMKKRSTLKL 112
++I S LH+R+ F+P LI L V P E + + + ++R L++
Sbjct: 100 VEIISSLHRRFSTSFTPVLISSLSAVLSPPSRSQLAALPQEQREKEDATRVARQRPVLRV 159
Query: 113 LLELYFIGIIEDS------SIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQGRIFLG 166
EL +GII D+ + ++K+L S + + T L S++R FLG
Sbjct: 160 CSELALVGIIRDAPSRSGGEWVMKVLKELLSNDPSLS--SLPLLSTFLKSYSRP---FLG 214
Query: 167 L--------PLSG-PG-------QEIYEEF-----FKGLNITADQKKIFKKAFHTYYNAV 205
L P++ PG ++ F + I D + K+ Y+ V
Sbjct: 215 LVPPQAKQIPVNAEPGTLSAASTNDVQASFPPIIKEEEELIEQDLRDRIKRMCEGYFEIV 274
Query: 206 QELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQ 265
+ L EH L++ + N + GE+ E+ +YEK+ K Y+ L + +L+E L
Sbjct: 275 CKKLVIEHKRLQEQDRRNHEAYIRSGEIFEDRQQAYEKMTKGYEKLLASCQTLSELLYQP 334
Query: 266 PPVMPE-DVHTTRVTSGEDASPASGKDSS----VPEPVWDDEETRAFYECLPDLRAFVPA 320
P +P + + G G +S V W+DEE R F+E + DL+ FVP
Sbjct: 335 LPSLPTISQKSDSIQIGTSNGMGLGDESEDVLMVSGGKWEDEEERRFFEDIQDLKDFVPK 394
Query: 321 VLLG 324
+LG
Sbjct: 395 SVLG 398
>gi|71659025|ref|XP_821238.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70886611|gb|EAN99387.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 1536
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 87/386 (22%), Positives = 145/386 (37%), Gaps = 53/386 (13%)
Query: 398 GKDKEEKDK--EKAKDPDKEKGKEKDTERKVETEKEKLK----GVEGTNLD------ALL 445
G D EE D E A + +E + +TE E+ +L+ GV + LL
Sbjct: 557 GGDSEEGDTDVEAAANTMEEGKGQYNTETVKLMERRRLRLAKLGVPAALFNDYAEVLKLL 616
Query: 446 QRLPGCVSRDLIDQLTVEFCY-----LNSKSNRKRLVRALFNVPRTSLEL---------- 490
+ L C + D ID+ F L S R F R L L
Sbjct: 617 EELGECTTADAIDEWCERFVGEALVPLRKSSENVVGARLFFTNCRMLLTLELRHFLRFRY 676
Query: 491 ---LPYYSRMVATLSTCMKDVSSMLIQMLE----EEFNFLINKKDQMN---------IET 534
LP+ +R A DV L LE E++ +K++ ++
Sbjct: 677 PEKLPFMARCAAIFDQYFHDVGIYLGGRLEAQWRREYSTSTSKRETSTSCSTRSDEFLQR 736
Query: 535 KIRNI-RFIGELCKFKIAPAGLVFSCLKACLDDFTHH-NIDVACNLLETCGRFLYRSPET 592
++ R++ EL KF V S L ++D ++ C +++ G FL R+ T
Sbjct: 737 RVGATGRYLCELMKFGTISPSRVLSLLNIAVEDLKQPCSVATICAIIQHGGLFLVRNHAT 796
Query: 593 SIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERS-----ARVSKVRPPLHQYI 647
+++ L + + +V A+ +P S + K PL +Y+
Sbjct: 797 RRAAEKLIQKLKTNMMNEEMKAEWSHMVTEAFSFLQPATPSLVAFPSPAQKEESPLERYV 856
Query: 648 RKLLFSDLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLS 705
R LL L + VL L ++PW D E L++ VH+ + L+ + L+
Sbjct: 857 RSLLHERLCPDGTKFVLDGLLRMPWDDVEKREMLIRALRSVHQMSLDAVPLLVDILKELA 916
Query: 706 RY-HDEFAVAVVDEVLEEIRLGLELN 730
H ++ EV E++R LE+
Sbjct: 917 HADHIHVVQRILYEVAEDMRRDLEVG 942
>gi|313238484|emb|CBY19981.1| unnamed protein product [Oikopleura dioica]
Length = 290
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 52/109 (47%)
Query: 219 MENENAKILNAKGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRV 278
ME N I +GE+ EE S+ + L S E L+++ +PED +
Sbjct: 1 MEKHNRFIYQQRGEIHEERRSALLDQQSKVRELKEFAISFGELLNLEIVNLPEDSKEDKE 60
Query: 279 TSGEDASPASGKDSSVPEPVWDDEETRAFYECLPDLRAFVPAVLLGEAE 327
S + P G ++ + W+DE+ R FY CLPDL++ VP ++E
Sbjct: 61 MSIDIYHPERGIENCEMDDCWEDEDQRLFYTCLPDLKSLVPMNAWKDSE 109
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Query: 441 LDALLQRLPGCVSRDLIDQLTVEFCY-LNSKSNRKRLVRALFNVPRTSLELLPYYSRMVA 499
D ++ L +R+L+D EF LN+ NRKRL R ++ V R ++LLP+++R+ A
Sbjct: 163 FDVYMKSLMTIYNRELVDAAAQEFLLTLNTPVNRKRLPREIWKVDRRRVDLLPFFTRLAA 222
Query: 500 TLSTC----MKDVSSMLIQMLEEEFNFLINKK 527
+L C D++S L++ + + + NKK
Sbjct: 223 SLKECAPKIADDLASYLLKEMVSKKSVAFNKK 254
>gi|395755835|ref|XP_002833638.2| PREDICTED: regulator of nonsense transcripts 2-like isoform 1
[Pongo abelii]
Length = 543
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 88/193 (45%), Gaps = 13/193 (6%)
Query: 35 ICKYIANIYIYTYTLLLGLWLTLVYFLKICSLLHQRYKDFSPCLIDGLLKVFFPGKSGED 94
+ KYIA L + + + +CSL HQRY DF+P L+ K F E
Sbjct: 359 LSKYIAEAVASIVEAKLKI-SDVNCAVHLCSLFHQRYADFAPSLLQVWKKHF------EA 411
Query: 95 LDADRNLKAMKKRSTLKLLLELYFIGIIEDSSIFINIIKDLTSIEHLKDRDTTQTNLTLL 154
++ K R+ L+ + EL +GI D I + L +I + DR+ + T+++++
Sbjct: 412 RKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKNIINA-DRE-SHTHVSVV 469
Query: 155 ASFARQ-GRIFLGL---PLSGPGQEIYEEFFKGLNITADQKKIFKKAFHTYYNAVQELLQ 210
SF R G GL + ++ F I+ ++++ F+ Y+ ++ + L+
Sbjct: 470 ISFCRHCGDDIAGLVPRKVKSAAEKFNLSFPPSEIISPEKQQPFQNLLKEYFTSLTKHLK 529
Query: 211 AEHTSLRQMENEN 223
+H L+ E +N
Sbjct: 530 RDHRELQNTERQN 542
>gi|71666464|ref|XP_820190.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70885526|gb|EAN98339.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 1537
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 107/265 (40%), Gaps = 23/265 (8%)
Query: 489 ELLPYYSRMVATLSTCMKDVSSMLIQMLE----EEFNFLINKKDQMN---------IETK 535
E LP+ +R A DV L LE E++ +K++ ++ +
Sbjct: 680 EKLPFMARCAAIFDQYFHDVGIYLGARLEAQWRREYSTSTSKRETSTSCSTRSDEFLQRR 739
Query: 536 IRNI-RFIGELCKFKIAPAGLVFSCLKACLDDFTHH-NIDVACNLLETCGRFLYRSPETS 593
+ R++ EL KF P V + L ++D ++ C ++E G FL R+ T
Sbjct: 740 VGATGRYLCELMKFGTIPPSRVLNLLNIAVEDLKQPCSVATICAIIEHGGLFLVRNHATR 799
Query: 594 IRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERS-----ARVSKVRPPLHQYIR 648
+++ L + + +V A+ +P S + K PL +Y+R
Sbjct: 800 RATEKLIQKLKTNMMNEEMKAECSHMVTEAFSFLQPATPSLVAFPSPAQKEESPLERYVR 859
Query: 649 KLLFSDLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTAGLSR 706
LL L + VL L ++PW D E L++ VH+ + L+ + L+
Sbjct: 860 SLLHERLCPDGTKFVLDGLLRMPWDDVEKREMLIRALRSVHQMSLDVVPLVVDILKELAH 919
Query: 707 Y-HDEFAVAVVDEVLEEIRLGLELN 730
H ++ EV E++R LE+
Sbjct: 920 ADHVHVVQRILYEVAEDMRRDLEVG 944
>gi|344239321|gb|EGV95424.1| Regulator of nonsense transcripts 2 [Cricetulus griseus]
Length = 381
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 79/165 (47%), Gaps = 12/165 (7%)
Query: 63 ICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIGII 122
+CSL HQRY DF+P L+ K F E ++ K R+ L+ + EL +GI
Sbjct: 224 LCSLFHQRYADFAPSLLQVWKKHF------EARKEEKTPNITKLRTDLRFIAELTIVGIF 277
Query: 123 EDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQ-GRIFLGL---PLSGPGQEIYE 178
D I + L SI + DR+ + T+++++ SF R G GL + ++
Sbjct: 278 TDKEGLSLIYEQLKSIINA-DRE-SHTHVSVVISFCRHCGDDIAGLVPRKVKSAAEKFNL 335
Query: 179 EFFKGLNITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENEN 223
F I+ ++++ F+ Y+ ++ + L+ +H L+ E +N
Sbjct: 336 NFPPSEIISPEKQQPFQNLLKEYFTSLTKHLKRDHRELQNTERQN 380
>gi|407859906|gb|EKG07224.1| hypothetical protein TCSYLVIO_001646 [Trypanosoma cruzi]
Length = 1632
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 128/630 (20%), Positives = 224/630 (35%), Gaps = 108/630 (17%)
Query: 221 NENAKILNAKGELSEENSSSYEKLRKSYDHLYRNVSSLAEALDMQPPV--------MPED 272
N+ A+ S + + + ++ + LY +L L PP+ E+
Sbjct: 504 NDQAEFRGKTARFSNDEAR-FRFFQEHVERLYVVCENLLGMLGFSPPLPVDLSIVEQREE 562
Query: 273 VHTTRVTSGEDASPASGKDSSVPEPVWDDEETRAFYECLPDLRAFVPAVLLGEAEHKANE 332
V R++ P G ++ + D+E R FYE +P++ + V L
Sbjct: 563 VEAVRISVTRKFHPIVGAETL---NRFGDDEQRIFYEYVPEIETLLDEVFL--------- 610
Query: 333 PSVKPLEQPTDPASEPDQGQLAAQDTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPD 392
+ +E + +L ++ +A A AS G + G A
Sbjct: 611 ---------SSLTAEKAKWELFSRHSAIGGAI--ASGTGATTSSGLSAVGSGGVGAP--- 656
Query: 393 KEKGKGKDKEEKDKEKAKDPDKEKGKEKDTERKVETEKEKLK----GVEGTNLD------ 442
++ + D E A + +E + +TE E+ +L+ GV +
Sbjct: 657 GGGDGDSEEGDMDVEAAANTLEEGKGQYNTETVKLMERRRLRLAKLGVPAALFNDYAEVL 716
Query: 443 ALLQRLPGCVSRDLIDQLTVEFCY-----LNSKSNRKRLVRALFNVPRTSLEL------- 490
LL+ L C + ID+ F L S R F R L L
Sbjct: 717 KLLEELGECTTAVAIDEWCERFVGEAIVPLRKSSENVVGARLFFTNCRMLLTLELRHFLR 776
Query: 491 ------LPYYSRMVATLSTCMKDVSSMLIQMLE----EEFNFLINKKD-QMNIETKIRNI 539
LP+ +R A DV L LE E++ +K++ + T+ +
Sbjct: 777 FRYPEKLPFMARCAAIFDQYFHDVGIYLGARLEAQWRREYSTPTSKRETSTSCSTRSDEL 836
Query: 540 ---------RFIGELCKFKIAPAGLVFSCLKACLDDFTHH-NIDVACNLLETCGRFLYRS 589
R++ EL KF P V + L ++D ++ C ++E G FL R+
Sbjct: 837 LQRRVGATGRYLCELMKFGTIPPSRVLNLLNIAVEDLKQPCSVATICAIIEHGGLFLVRN 896
Query: 590 PETSIRMANMLEILMRLKNVKNLDPRHVTLVENAYYLCKPPERS-----ARVSKVRPPLH 644
T +++ L + + +V A+ +P S + K PL
Sbjct: 897 HATRRAAEKLIQKLKTNMMNEEMKVECSHMVTEAFSFLQPATPSLVALPSPAQKEGSPLE 956
Query: 645 QYIRKLLFSDLDKSSIEHVLRQLRKLPWSDCE--SYLLKCFMKVHKGKYGQIHLIASLTA 702
+Y+R LL L + VL L ++PW D E L++ VH+ + L+ +
Sbjct: 957 RYVRSLLHERLCPDGTKFVLDGLLRMPWDDVEKREMLIRTLRSVHQMSLDVVPLVVDILK 1016
Query: 703 GLSRY-HDEFAVAVVDEVLEEIRLGLELN------------DYGM----------QQRRL 739
L+ H + ++ EV E++R LE++ Y M Q RL
Sbjct: 1017 ELAHADHIDVVQRILYEVAEDMRRDLEVSAATPELVSGSSRKYVMISEPYTTHRPLQWRL 1076
Query: 740 AHMRFLGELYNYEHVDSSVIFDTLYLILVF 769
A FL Y V + L ++L++
Sbjct: 1077 ADCFFLANFYRVRLVSFRFVCHMLLMLLLY 1106
>gi|397573329|gb|EJK48649.1| hypothetical protein THAOC_32533, partial [Thalassiosira oceanica]
Length = 998
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 65/142 (45%), Gaps = 6/142 (4%)
Query: 185 NITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKL 244
NIT+ K A+ + N+ + H L ++E + +G LSE
Sbjct: 425 NITSTLHKHCIGAYQSLANS----YVSTHVRLGKLEKRCEQDRLLQGTLSEAREKGLADA 480
Query: 245 RKSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRV--TSGEDASPASGKDSSVPEPVWDDE 302
R + L + V +L+EALD+ PV+ E+ T G + SG D +DDE
Sbjct: 481 RSLMESLTKTVQTLSEALDVTVPVLKEESAEESEESTKGIELWTKSGVDGDEKLGSFDDE 540
Query: 303 ETRAFYECLPDLRAFVPAVLLG 324
ETR+FY +PDL + P LLG
Sbjct: 541 ETRSFYCDVPDLLSIKPPALLG 562
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 44/99 (44%), Gaps = 10/99 (10%)
Query: 63 ICSLLHQRYKDFSPCLIDGLLKVFFPGKSGEDLDADRNLKAMKKRSTLKLLLELYFIGII 122
+C +H+RY F L+ GL+ GK + L +R +LL E G++
Sbjct: 246 VCVEMHRRYDSFLGALVPGLM-AEINGKGNDGL---------PRRICFRLLTEFLLHGVL 295
Query: 123 EDSSIFINIIKDLTSIEHLKDRDTTQTNLTLLASFARQG 161
D + ++ D + ++ +D ++ L+ + A+ G
Sbjct: 296 TDPKPIVKVVNDAAGVPSVEGKDYAVSDANLIVTLAKCG 334
>gi|387204594|gb|AFJ69025.1| regulator of nonsense transcripts, partial [Nannochloropsis
gaditana CCMP526]
Length = 122
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%)
Query: 253 RNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASGKDSSVPEPVWDDEETRAFYECLP 312
+NV +L++ LD PP++P + + G + G +DDEE++ FYE LP
Sbjct: 2 KNVQALSDGLDQPPPLLPREDDERESSPGGGLTLWDGDMGHRELGPYDDEESKLFYEDLP 61
Query: 313 DLRAFVPAVLLGEAEHKAN 331
DL A +PA +LG +E +A+
Sbjct: 62 DLLATLPAAVLGLSEEEAS 80
>gi|380420333|ref|NP_001154919.2| nipped-B-like protein B [Danio rerio]
gi|408407682|sp|F1QBY1.1|NIPLB_DANRE RecName: Full=Nipped-B-like protein B
Length = 2876
Score = 47.8 bits (112), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 49/67 (73%), Gaps = 4/67 (5%)
Query: 372 KSVEKGKDKE-EKEKEKAKDPDKEKGKGKDKE---EKDKEKAKDPDKEKGKEKDTERKVE 427
K+ EK +DKE EK +EK +D + EKG+ KD++ EKD++K +D D++K +EKD ++ E
Sbjct: 812 KAREKDQDKELEKGREKDQDKELEKGQEKDRDKVREKDRDKVRDKDRDKVREKDRDKVRE 871
Query: 428 TEKEKLK 434
+++KL+
Sbjct: 872 KDRDKLR 878
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 48/65 (73%), Gaps = 4/65 (6%)
Query: 372 KSVEKGKDKEE---KEKEKAKDPDKEKGKGKDKE-EKDKEKAKDPDKEKGKEKDTERKVE 427
K EK +DKE+ ++K+++KD +K + K +DKE EKD+EK +D + EKG+EKD ++++E
Sbjct: 740 KEQEKVRDKEQVKGRDKKRSKDLEKCREKDQDKELEKDREKNQDKELEKGREKDQDKELE 799
Query: 428 TEKEK 432
+EK
Sbjct: 800 KGREK 804
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 54/87 (62%), Gaps = 22/87 (25%)
Query: 370 EGKSVEKGKDKE-----EKEKEKAKDPDKEKGKGKDKE-----------EKDKEKAKDPD 413
+ K +EKG++K+ EK+++K +D D++K + KD++ EKD+EK ++ D
Sbjct: 830 QDKELEKGQEKDRDKVREKDRDKVRDKDRDKVREKDRDKVREKDRDKLREKDREKIRERD 889
Query: 414 KEKGKEKDTE------RKVETEKEKLK 434
++KG+EKD + R+ + EKE+LK
Sbjct: 890 RDKGREKDRDKEQVKTREKDQEKERLK 916
Score = 43.5 bits (101), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 47/66 (71%), Gaps = 6/66 (9%)
Query: 372 KSVEKGKDKE-EKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDK----EKGKEKDTERKV 426
K EK +DKE EK +EK +D + EKG+ KD++ K+ EKA++ D+ EKG+EKD ++++
Sbjct: 776 KDREKNQDKELEKGREKDQDKELEKGREKDRD-KEMEKAREKDQDKELEKGREKDQDKEL 834
Query: 427 ETEKEK 432
E +EK
Sbjct: 835 EKGQEK 840
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 48/65 (73%), Gaps = 2/65 (3%)
Query: 370 EGKSVEKGKDKEE-KEKEKAKDPDKEKGKGKDKE-EKDKEKAKDPDKEKGKEKDTERKVE 427
+G+ ++ KD E+ +EK++ K+ +K++ K +DKE EK +EK +D + EKG+EKD ++++E
Sbjct: 752 KGRDKKRSKDLEKCREKDQDKELEKDREKNQDKELEKGREKDQDKELEKGREKDRDKEME 811
Query: 428 TEKEK 432
+EK
Sbjct: 812 KAREK 816
Score = 40.0 bits (92), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 20/81 (24%)
Query: 372 KSVEKGKDKE-----EKEKEKAKDPDKEKGKGKDK-------EEK--DKEKAKDPDK--- 414
K +EKG+DKE EK++EK +D + EKG+ K++ +EK DKE+ K DK
Sbjct: 700 KELEKGRDKERVKDQEKDQEKGRDKEVEKGRYKERVKDRVKEQEKVRDKEQVKGRDKKRS 759
Query: 415 ---EKGKEKDTERKVETEKEK 432
EK +EKD ++++E ++EK
Sbjct: 760 KDLEKCREKDQDKELEKDREK 780
Score = 39.3 bits (90), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 12/75 (16%)
Query: 374 VEKGKDKEEKEKEKAKDPDKEKG------KGKDKE-----EKDKEKAKDPDKEKGKEKDT 422
VE +DKE+ E+EK D EKG KG+DKE EKD+EK +D + EKG+ K+
Sbjct: 676 VEHNRDKEQ-EQEKVGDKGLEKGREKELEKGRDKERVKDQEKDQEKGRDKEVEKGRYKER 734
Query: 423 ERKVETEKEKLKGVE 437
+ E+EK++ E
Sbjct: 735 VKDRVKEQEKVRDKE 749
>gi|333777884|dbj|BAK23967.1| nipped-B like a [Danio rerio]
Length = 2876
Score = 47.8 bits (112), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 49/67 (73%), Gaps = 4/67 (5%)
Query: 372 KSVEKGKDKE-EKEKEKAKDPDKEKGKGKDKE---EKDKEKAKDPDKEKGKEKDTERKVE 427
K+ EK +DKE EK +EK +D + EKG+ KD++ EKD++K +D D++K +EKD ++ E
Sbjct: 812 KAREKDQDKELEKGREKDQDKELEKGQEKDRDKVREKDRDKVRDKDRDKVREKDRDKVRE 871
Query: 428 TEKEKLK 434
+++KL+
Sbjct: 872 KDRDKLR 878
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 48/65 (73%), Gaps = 4/65 (6%)
Query: 372 KSVEKGKDKEE---KEKEKAKDPDKEKGKGKDKE-EKDKEKAKDPDKEKGKEKDTERKVE 427
K EK +DKE+ ++K+++KD +K + K +DKE EKD+EK +D + EKG+EKD ++++E
Sbjct: 740 KEQEKVRDKEQVKGRDKKRSKDLEKCREKDQDKELEKDREKNQDKELEKGREKDQDKELE 799
Query: 428 TEKEK 432
+EK
Sbjct: 800 KGREK 804
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 54/87 (62%), Gaps = 22/87 (25%)
Query: 370 EGKSVEKGKDKE-----EKEKEKAKDPDKEKGKGKDKE-----------EKDKEKAKDPD 413
+ K +EKG++K+ EK+++K +D D++K + KD++ EKD+EK ++ D
Sbjct: 830 QDKELEKGQEKDRDKVREKDRDKVRDKDRDKVREKDRDKVREKDRDKLREKDREKIRERD 889
Query: 414 KEKGKEKDTE------RKVETEKEKLK 434
++KG+EKD + R+ + EKE+LK
Sbjct: 890 RDKGREKDRDKEQVKTREKDQEKERLK 916
Score = 43.5 bits (101), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 47/66 (71%), Gaps = 6/66 (9%)
Query: 372 KSVEKGKDKE-EKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDK----EKGKEKDTERKV 426
K EK +DKE EK +EK +D + EKG+ KD++ K+ EKA++ D+ EKG+EKD ++++
Sbjct: 776 KDREKNQDKELEKGREKDQDKELEKGREKDRD-KEMEKAREKDQDKELEKGREKDQDKEL 834
Query: 427 ETEKEK 432
E +EK
Sbjct: 835 EKGQEK 840
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 48/65 (73%), Gaps = 2/65 (3%)
Query: 370 EGKSVEKGKDKEE-KEKEKAKDPDKEKGKGKDKE-EKDKEKAKDPDKEKGKEKDTERKVE 427
+G+ ++ KD E+ +EK++ K+ +K++ K +DKE EK +EK +D + EKG+EKD ++++E
Sbjct: 752 KGRDKKRSKDLEKCREKDQDKELEKDREKNQDKELEKGREKDQDKELEKGREKDRDKEME 811
Query: 428 TEKEK 432
+EK
Sbjct: 812 KAREK 816
Score = 40.0 bits (92), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 20/81 (24%)
Query: 372 KSVEKGKDKE-----EKEKEKAKDPDKEKGKGKDK-------EEK--DKEKAKDPDK--- 414
K +EKG+DKE EK++EK +D + EKG+ K++ +EK DKE+ K DK
Sbjct: 700 KELEKGRDKERVKDQEKDQEKGRDKEVEKGRYKERVKDRVKEQEKVRDKEQVKGRDKKRS 759
Query: 415 ---EKGKEKDTERKVETEKEK 432
EK +EKD ++++E ++EK
Sbjct: 760 KDLEKCREKDQDKELEKDREK 780
Score = 39.3 bits (90), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 12/75 (16%)
Query: 374 VEKGKDKEEKEKEKAKDPDKEKG------KGKDKE-----EKDKEKAKDPDKEKGKEKDT 422
VE +DKE+ E+EK D EKG KG+DKE EKD+EK +D + EKG+ K+
Sbjct: 676 VEHNRDKEQ-EQEKVGDKGLEKGREKELEKGRDKERVKDQEKDQEKGRDKEVEKGRYKER 734
Query: 423 ERKVETEKEKLKGVE 437
+ E+EK++ E
Sbjct: 735 VKDRVKEQEKVRDKE 749
>gi|402583242|gb|EJW77186.1| cytochrome c oxidase subunit 1, partial [Wuchereria bancrofti]
Length = 256
Score = 47.4 bits (111), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 63/138 (45%), Gaps = 1/138 (0%)
Query: 186 ITADQKKIFKKAFHTYYNAVQELLQAEHTSLRQMENENAKILNAKGELSEENSSSYEKLR 245
I+ D KK F + Y ++ E ++ + + Q+ + +G+ S E+ S E++R
Sbjct: 15 ISVDYKKTFAQLLLDYRVSLVEHIKQDLFEMNQLLLSIKRQTRTRGDASAEDRSHLEEIR 74
Query: 246 KSYDHLYRNVSSLAEALDMQPPVMPEDVHTTRVTSGEDASPASGKDSSVPEPVWDDEETR 305
Y+ + + L+E L ++ M ++ + A S VW DE+TR
Sbjct: 75 ARYEKILTSGIQLSEYLGVEMETM-KEEQSEDEEEEVSALALSRALHEGTITVWPDEDTR 133
Query: 306 AFYECLPDLRAFVPAVLL 323
FYE +LR VPA+L
Sbjct: 134 QFYETRMELRQLVPAILF 151
>gi|339006472|ref|ZP_08639047.1| scaffolding dockerin binding protein A [Brevibacillus laterosporus
LMG 15441]
gi|338775681|gb|EGP35209.1| scaffolding dockerin binding protein A [Brevibacillus laterosporus
LMG 15441]
Length = 1272
Score = 46.6 bits (109), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 44/69 (63%), Gaps = 6/69 (8%)
Query: 372 KSVEKGKDKE---EKEKEKAKDPDKEKGKGKDKE---EKDKEKAKDPDKEKGKEKDTERK 425
K EK +DKE +K+KE KD DKE K +DKE ++DKE KD DKE GK++D E +
Sbjct: 945 KEPEKDRDKEPEKDKDKEPEKDRDKEPEKDRDKEPGKDRDKEPGKDRDKEPGKDRDKEPE 1004
Query: 426 VETEKEKLK 434
+ +KE K
Sbjct: 1005 KDRDKEPGK 1013
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 42/66 (63%), Gaps = 6/66 (9%)
Query: 375 EKGKDKE---EKEKEKAKDPDKEKGKGKDKE---EKDKEKAKDPDKEKGKEKDTERKVET 428
EK +DKE +++KE KD DKE K +DKE ++DKE KD DKE GK++D E +
Sbjct: 940 EKDRDKEPEKDRDKEPEKDKDKEPEKDRDKEPEKDRDKEPGKDRDKEPGKDRDKEPGKDR 999
Query: 429 EKEKLK 434
+KE K
Sbjct: 1000 DKEPEK 1005
Score = 43.5 bits (101), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 49/87 (56%), Gaps = 12/87 (13%)
Query: 360 EVSADLGASPEGKSVEKGKDKE-----EKEKEKAKDPDKEKGKGKDKE---EKDKEKAKD 411
E DLG E K E KD++ +++KE KD DKE K +DKE ++DKE KD
Sbjct: 875 ESKPDLGTDGEAKDKEPEKDRDKEPEKDRDKEPEKDRDKEPEKDRDKEPEKDRDKEPEKD 934
Query: 412 ----PDKEKGKEKDTERKVETEKEKLK 434
P+K++ KE + +R E EK+K K
Sbjct: 935 RDREPEKDRDKEPEKDRDKEPEKDKDK 961
Score = 42.4 bits (98), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 38/58 (65%), Gaps = 6/58 (10%)
Query: 372 KSVEKGKDKE---EKEKEKAKDPDKEKGKGKDKE---EKDKEKAKDPDKEKGKEKDTE 423
K EK +DKE +++KE KD DKE GK +DKE ++DKE KD DKE ++K+ E
Sbjct: 969 KEPEKDRDKEPGKDRDKEPGKDRDKEPGKDRDKEPEKDRDKEPGKDRDKEPERDKEKE 1026
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 45/68 (66%), Gaps = 4/68 (5%)
Query: 372 KSVEKGKDKE---EKEKEKAKDPDKEKGKGKDKE-EKDKEKAKDPDKEKGKEKDTERKVE 427
K EK +DKE +++KE KD D+E K +DKE EKD++K + DK+K EKD +++ E
Sbjct: 913 KEPEKDRDKEPEKDRDKEPEKDRDREPEKDRDKEPEKDRDKEPEKDKDKEPEKDRDKEPE 972
Query: 428 TEKEKLKG 435
+++K G
Sbjct: 973 KDRDKEPG 980
Score = 39.7 bits (91), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 69/138 (50%), Gaps = 11/138 (7%)
Query: 306 AFYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQD-TAEVSAD 364
A E + +L+ V V E E K P + + D E D+ + +D E D
Sbjct: 854 ALQEGVKELKIAVKTVTDKEKESK---PDLGTDGEAKDKEPEKDRDKEPEKDRDKEPEKD 910
Query: 365 LGASPE---GKSVEKGKDKE---EKEKEKAKDPDKEKGKGKDKE-EKDKEKAKDPDKEKG 417
PE K EK +DKE ++++E KD DKE K +DKE EKDK+K + D++K
Sbjct: 911 RDKEPEKDRDKEPEKDRDKEPEKDRDREPEKDRDKEPEKDRDKEPEKDKDKEPEKDRDKE 970
Query: 418 KEKDTERKVETEKEKLKG 435
EKD +++ +++K G
Sbjct: 971 PEKDRDKEPGKDRDKEPG 988
>gi|294656004|ref|XP_458235.2| DEHA2C12870p [Debaryomyces hansenii CBS767]
gi|218511995|sp|Q6BU84.2|CWC22_DEBHA RecName: Full=Pre-mRNA-splicing factor CWC22
gi|199430782|emb|CAG86311.2| DEHA2C12870p [Debaryomyces hansenii CBS767]
Length = 637
Score = 46.6 bits (109), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 103/219 (47%), Gaps = 17/219 (7%)
Query: 412 PDKEKGKEKDTERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKS 471
P K K + E+ E+ + ++ L + R + I ++ VE LN +
Sbjct: 23 PAKLKALQTKINNSSESTTEEYQVLQWEQLKRAINRQVNKCNVSNIREIVVELFKLNLQR 82
Query: 472 NRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEF--NFLINKKDQ 529
+ L+R++ T L P Y+ ++A L++ + +V +++ L +F N++ NKK+
Sbjct: 83 GKGLLIRSIMKAQLTDLIFTPIYASLIAVLNSKIPEVGELILNRLLLQFRKNYIKNKKNC 142
Query: 530 MNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRS 589
I + FI L ++ L+ L+ L++ T+ +I++ ++ G++L
Sbjct: 143 ------ISSAIFIVHLINQRVCSEILILQILQLLLENPTNDSIEICVEIMNQVGKYL--- 193
Query: 590 PETSIRMANMLEILMRLKNV----KNLDPRHVTLVENAY 624
E S+ NM I RL+++ ++++ R L+EN +
Sbjct: 194 QENSVAANNM--IFNRLRSILHENEDINDRSQFLIENLF 230
>gi|348532937|ref|XP_003453962.1| PREDICTED: nipped-B-like protein [Oreochromis niloticus]
Length = 2680
Score = 45.8 bits (107), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 57/97 (58%), Gaps = 15/97 (15%)
Query: 372 KSVEKGKDKE---EKEKEKAKDPDKEKGKGKDKE-------EKDKEKAKDPDKEKGKEKD 421
K E+ +DKE EKEKE+ +D +KE+ + +DKE E+D++K K +KE+ ++KD
Sbjct: 677 KEKERDRDKERHTEKEKERDRDKEKERDRDRDKERHIEKEKERDRDKEKHIEKERDRDKD 736
Query: 422 TERKVETEKEKLKGVEGTNLDALLQRLPGCVSRDLID 458
R +E EKE+ K + +L+ C SR+L D
Sbjct: 737 --RHIEKEKERDKAKDRDRKQKMLRE--NC-SRNLAD 768
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 384 EKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEKDTERKVETEKEKLKGVE 437
EKEK +D DKE+ K+KE +D++K K+ D+++ KE+ E++ E +++K K +E
Sbjct: 676 EKEKERDRDKERHTEKEKE-RDRDKEKERDRDRDKERHIEKEKERDRDKEKHIE 728
>gi|336466243|gb|EGO54408.1| hypothetical protein NEUTE1DRAFT_124660 [Neurospora tetrasperma
FGSC 2508]
gi|350286901|gb|EGZ68148.1| hypothetical protein NEUTE2DRAFT_160570 [Neurospora tetrasperma
FGSC 2509]
Length = 506
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 6/87 (6%)
Query: 346 SEPDQGQLAAQDTAEVSADLGASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKD 405
+ P + + AA+ T+ P+GK EK K K+ EK KAK P+K K K + +
Sbjct: 42 ANPARQRPAARSTSRSQPTQPGKPQGKPTEKPKAKQP-EKPKAKQPEKPKAK-----QPE 95
Query: 406 KEKAKDPDKEKGKEKDTERKVETEKEK 432
K KA+ P+K K K+ +T + + EK K
Sbjct: 96 KPKARQPEKLKAKQPETSKDKQAEKPK 122
>gi|170055563|ref|XP_001863637.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167875512|gb|EDS38895.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 2930
Score = 43.1 bits (100), Expect = 0.60, Method: Composition-based stats.
Identities = 55/178 (30%), Positives = 77/178 (43%), Gaps = 27/178 (15%)
Query: 261 ALDMQPPVMPEDVH---TTRVTSGEDASPASGKDSSVPEPVWDDEETRAFYECLPDLRAF 317
A + + PV D T ED P D+ EPV DEE +
Sbjct: 2203 AAEAEKPVEAADEEQKPTESAVEAEDQKPTPAADAQ--EPVESDEEEK------------ 2248
Query: 318 VPAVLLGEAEHKANEPSVKPLEQ--PTDPASEPDQGQLAAQDTAE-VSADLGASPEGKSV 374
PAV E + K E +V+ E+ PT+ A E D+ + A D E V AD P +V
Sbjct: 2249 -PAVEADEVQ-KPTESAVEADEEQKPTEAAVEADEEEKPAVDAVEPVEADEEQKPTESAV 2306
Query: 375 EKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEKDTERKVETEKEK 432
E D+E+K A D EK D+E+K E A + D+E+ D VE ++E+
Sbjct: 2307 EA--DEEQKPTPAA---DAEKPVEADEEQKPTESAVEADEEEKPAVDAVEPVEADEEQ 2359
Score = 42.4 bits (98), Expect = 0.94, Method: Composition-based stats.
Identities = 51/183 (27%), Positives = 81/183 (44%), Gaps = 14/183 (7%)
Query: 260 EALDMQPPVMPEDVHTTRVTSGEDASPASGKDSSVPEPV---WDDEETRAFYECLPDLRA 316
EA + Q PV ++ + ++ PAS + +P DDE+ + + A
Sbjct: 1906 EADEEQKPVEADEEQKPTPAADDEQKPASDDTTEEQKPTPAAADDEQKPESDDAEKEQDA 1965
Query: 317 FVPAVLLGEAEHKANEPSVKPLEQPTDPASEPDQGQL---AAQDTAEVSADLGASPEGKS 373
PAV E E + P V E+ A E ++ A+ D E AD +P +S
Sbjct: 1966 --PAVADDETEKTTDAPVVSADEEQKPTADEEEEKPATPAASDDEQEQPADAATTPLPES 2023
Query: 374 VEKGKDKEEKEKEK-AKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEKDTERK---VETE 429
++ K EE+EK A D EK D+E+K A +++K E D E+K VE +
Sbjct: 2024 DDQVKPAEEEEKTTDAPVADDEKPVEADEEQKPTPVAD--EEQKPVEADEEQKPTPVEAD 2081
Query: 430 KEK 432
+E+
Sbjct: 2082 EEQ 2084
Score = 41.2 bits (95), Expect = 2.2, Method: Composition-based stats.
Identities = 47/192 (24%), Positives = 76/192 (39%), Gaps = 29/192 (15%)
Query: 263 DMQPPVMPEDVHTTRVTSGEDASPASGKDSSVPEPVWDDEETRAFYECLPDLRAFVPA-- 320
D + P E+ + + D+ G + +PV DEE +A P + A PA
Sbjct: 1616 DEKKPEADEEQTSATTVASIDSDDRVGVTEAEQKPVEADEEDKAATTVAPVMDAEKPAEE 1675
Query: 321 ----------VLLGEAEHKANEPSVKPLEQPTDPASEPDQGQLAAQD-------TAEVSA 363
V E + A + E+ PA++ +Q + A + A VS
Sbjct: 1676 APAADDEQKPVEADEEDKPATTVAPAKDEEIATPAADEEQKPIVADEEDKPATTVAPVSD 1735
Query: 364 DLGASPEGKSVEKGKDK------EEKEKEKAKDPDKEKGKGKDKEEK----DKEKAKDPD 413
D +PE +K DK + + K + D + KD+EE+ D+E+ D
Sbjct: 1736 DEEKAPESDEEQKEDDKPVIAADDVESKPQTTDAPAQDEVAKDEEEQKPTADEEQTPAAD 1795
Query: 414 KEKGKEKDTERK 425
E+ EKD E+K
Sbjct: 1796 DEQEPEKDAEQK 1807
Score = 39.7 bits (91), Expect = 6.7, Method: Composition-based stats.
Identities = 44/168 (26%), Positives = 68/168 (40%), Gaps = 12/168 (7%)
Query: 270 PEDVHTTRVTSGED-ASPASGKDSSVPEPVWDDEE-TRAFYECLPDLRAFVPAVLLGEAE 327
P D TT + +D PA ++ + PV DDE+ A E P P +
Sbjct: 2012 PADAATTPLPESDDQVKPAEEEEKTTDAPVADDEKPVEADEEQKP-----TPVADEEQKP 2066
Query: 328 HKANEPSVKPLEQPTDPASEP---DQGQLAAQDTAEVSADLGASPEGKSVEKGKDKEEKE 384
+A+E KP D +P D+ Q Q E + +P E D+EE E
Sbjct: 2067 VEADEEQ-KPTPVEADEEQKPVEADEAQKPTQAPVEADEEEQPAPVADDHESADDEEE-E 2124
Query: 385 KEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEKDTERKVETEKEK 432
K D+E+ +D+E A+ P + +K TE E ++E+
Sbjct: 2125 KPATPVADEEQKPVEDEETTPAADAEKPVEADEVQKPTESAAEADEEQ 2172
Score = 39.7 bits (91), Expect = 7.2, Method: Composition-based stats.
Identities = 43/178 (24%), Positives = 71/178 (39%), Gaps = 14/178 (7%)
Query: 256 SSLAEALDMQPPVMPEDVHTTRVTSGEDASPASGKDSSVPEPVWDDEETRAFYECLPDLR 315
+ L E+ D P E+ TT +D P + P PV D+E+ E + +
Sbjct: 2018 TPLPESDDQVKPAEEEE-KTTDAPVADDEKPVEADEEQKPTPVADEEQKPV--EADEEQK 2074
Query: 316 AFVPAVLLGEAEHK------ANEPSVKPLE--QPTDPASEPDQGQLAAQDTAEVSADLGA 367
P + + E K A +P+ P+E + PA D + A + E A A
Sbjct: 2075 ---PTPVEADEEQKPVEADEAQKPTQAPVEADEEEQPAPVADDHESADDEEEEKPATPVA 2131
Query: 368 SPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEKDTERK 425
E K VE + + EK + D+ + + E D+E+ P + K + E+K
Sbjct: 2132 DEEQKPVEDEETTPAADAEKPVEADEVQKPTESAAEADEEQKPTPAADAEKPVEEEQK 2189
>gi|195499487|ref|XP_002096969.1| GE25964 [Drosophila yakuba]
gi|194183070|gb|EDW96681.1| GE25964 [Drosophila yakuba]
Length = 908
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 36/50 (72%), Gaps = 3/50 (6%)
Query: 383 KEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEKDTERKVETEKEK 432
K+KEK +D D++K K KD+ D++K+K+ D++K KEKD +R E KEK
Sbjct: 178 KDKEKDRDRDRDKSKEKDR---DRDKSKEKDRDKSKEKDRDRVTEKSKEK 224
>gi|390340600|ref|XP_003725279.1| PREDICTED: uncharacterized protein LOC100893111 [Strongylocentrotus
purpuratus]
Length = 1497
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 49/72 (68%), Gaps = 2/72 (2%)
Query: 367 ASPEGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEKDTERKV 426
A GKS K KD++ KE+EK +D D+E+ + KD++ KD + K+ ++++ K++D +++
Sbjct: 1109 ARSSGKSRHKDKDRD-KEREKPRDKDRERHRDKDRD-KDSHRDKEHERKRDKDRDRQKEK 1166
Query: 427 ETEKEKLKGVEG 438
+ ++E+ K EG
Sbjct: 1167 DKDRERRKDREG 1178
Score = 40.0 bits (92), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 44/74 (59%), Gaps = 8/74 (10%)
Query: 372 KSVEKGKDKE-----EKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEKD---TE 423
K E+ KD+E EK++E+ KD +K+ K KD+ EKD++ K+ +KE KEKD +
Sbjct: 1168 KDRERRKDREGESSKEKDRERRKDREKDSSKDKDRREKDRDGRKEREKESSKEKDRGEKD 1227
Query: 424 RKVETEKEKLKGVE 437
R EKEK + E
Sbjct: 1228 RSKHREKEKDRDRE 1241
>gi|66827917|ref|XP_647313.1| initiation factor eIF-4 gamma middle domain-containing protein
[Dictyostelium discoideum AX4]
gi|60475416|gb|EAL73351.1| initiation factor eIF-4 gamma middle domain-containing protein
[Dictyostelium discoideum AX4]
Length = 925
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 98/223 (43%), Gaps = 23/223 (10%)
Query: 378 KDKEEKEKEKAKDPDKEKGKGKD--KEEK-----DKEKAKD----PDKEKGKEKDTERKV 426
K KEEKE+ + + +K++ K EEK K++A P K +K + K
Sbjct: 290 KSKEEKEETSSNNNNKKEQSEKSIKIEEKVLDAISKDRAGGVYIPPFKLAMMQKQIQDKS 349
Query: 427 ETEKEKLKGVEGTNLDALLQRLPGC---VSRDLIDQLTVEFCYLNSKSNRKRLVRALFNV 483
E ++++ DAL + + G VS + + VE N R L +++
Sbjct: 350 SPEYQRME------WDALRKSINGLINKVSYSNVKNIAVELFGENIIRGRGLLCQSIMVA 403
Query: 484 PRTSLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETKIRNIRFIG 543
+ SL Y ++A ++T + D+ +L++ L ++F + D+ I + RF+
Sbjct: 404 QQVSLPFTNVYGALIAIINTKIPDIGELLLKRLIDQFKKSFRRNDK---PICIASTRFVA 460
Query: 544 ELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFL 586
L +++ + L LD T +++VA N CG+ L
Sbjct: 461 HLVNQQVSGILVPLEILTLLLDKPTDDSVEVAVNFFLECGQTL 503
>gi|195572230|ref|XP_002104099.1| GD18627 [Drosophila simulans]
gi|194200026|gb|EDX13602.1| GD18627 [Drosophila simulans]
Length = 899
Score = 40.8 bits (94), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 379 DKEEKEKEKAKDPDKEKGKGKDKEEKDKEKAKDPDKEKGKEKDTERKVETEKE 431
D K+KEK +D D++K K KD++ ++K K KD D++K KEKD +R + KE
Sbjct: 177 DGRVKDKEKERDRDRDKSKEKDRD-REKSKEKDRDRDKSKEKDRDRVTDKSKE 228
>gi|449680457|ref|XP_002164893.2| PREDICTED: uncharacterized protein LOC100199855 [Hydra
magnipapillata]
Length = 600
Score = 40.4 bits (93), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 54/108 (50%), Gaps = 5/108 (4%)
Query: 490 LLPYYSRMVATLSTCMKDVSSMLIQMLEEEFNFLINKKDQMNIETK-IRNIRF-IGELCK 547
+L Y S +VA S +++ ++ML +F + +N E K NI F + L
Sbjct: 321 ILEYMSVVVAVQSLTNNEITPYFLEMLCIKF---VEMHKNLNSEKKECNNILFMLSSLYN 377
Query: 548 FKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIR 595
K+ + L+F ++ + FT H+I++ LL+ CG + R +S++
Sbjct: 378 LKVVDSLLIFDIIRFLIKTFTEHDIEMILLLLKACGADIRRDDPSSLK 425
>gi|422722986|ref|ZP_16779535.1| LPXTG-motif protein cell wall anchor domain protein [Enterococcus
faecalis TX2137]
gi|315027009|gb|EFT38941.1| LPXTG-motif protein cell wall anchor domain protein [Enterococcus
faecalis TX2137]
Length = 797
Score = 40.0 bits (92), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 65/142 (45%), Gaps = 14/142 (9%)
Query: 307 FYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDP--ASEPDQGQLAAQDTAEVSAD 364
F L + R + L E HK N+P V+ ++ +P + EP++G+ A A D
Sbjct: 553 FNSALNEDRTLLQLGALFENNHKINQPHVEEPDKDKEPDASGEPEKGKDPA---ASGEPD 609
Query: 365 LGASPEGKSVEKGKDKEEK---EKEKAKDPDKEKGKGKDKE-----EKDKEKAKDPDKEK 416
P+ S E KDK+ E +K K+PD KDKE E DK+K D E
Sbjct: 610 KDKEPDA-SGEADKDKDPNASGEPDKDKEPDASGEADKDKEPNASGEPDKDKEPDASGEP 668
Query: 417 GKEKDTERKVETEKEKLKGVEG 438
K+K+ + E EK+K G
Sbjct: 669 EKDKEPDASGEPEKDKDSDASG 690
>gi|50551227|ref|XP_503087.1| YALI0D20790p [Yarrowia lipolytica]
gi|74634333|sp|Q6C8C5.1|CWC22_YARLI RecName: Full=Pre-mRNA-splicing factor CWC22
gi|49648955|emb|CAG81279.1| YALI0D20790p [Yarrowia lipolytica CLIB122]
Length = 954
Score = 39.7 bits (91), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 72/162 (44%), Gaps = 8/162 (4%)
Query: 427 ETEKEKLKGVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRT 486
+T KE + ++ NL + L VS I + E N R R++
Sbjct: 210 KTSKE-FQKIQFDNLKKAINSLVNKVSAQNIRDIAGEIFTHNLIRGRGLFCRSVMTAQSL 268
Query: 487 SLELLPYYSRMVATLSTCMKDVSSMLIQMLEEEF--NFLINKKDQMNIETKIRNIRFIGE 544
+L P Y+ + A +++ + V +L++ L +F + N+KD + ++ F+
Sbjct: 269 ALPYTPVYACLTAIVNSKLPQVGELLVRRLILQFRRGYKRNQKD-----VCLSSVTFLAH 323
Query: 545 LCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFL 586
LC + +A LV L L+ T H+++VA ++ G FL
Sbjct: 324 LCNYHVAHEVLVLQLLHLLLETPTDHSVEVAVAFIKESGAFL 365
>gi|257086389|ref|ZP_05580750.1| amidase [Enterococcus faecalis D6]
gi|256994419|gb|EEU81721.1| amidase [Enterococcus faecalis D6]
Length = 717
Score = 39.7 bits (91), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 65/142 (45%), Gaps = 14/142 (9%)
Query: 307 FYECLPDLRAFVPAVLLGEAEHKANEPSVKPLEQPTDP--ASEPDQGQLAAQDTAEVSAD 364
F L + R + L E HK N+P V+ ++ +P + EP++G+ A A D
Sbjct: 473 FNSALNEDRTLLQLGALFENNHKINQPHVEEPDKDKEPDASGEPEKGKDPA---ASGEPD 529
Query: 365 LGASPEGKSVEKGKDKEEK---EKEKAKDPDKEKGKGKDKE-----EKDKEKAKDPDKEK 416
P+ S E KDK+ E +K K+PD KDKE E DK+K D E
Sbjct: 530 KDKEPDA-SGEADKDKDPNASGEPDKDKEPDASGEADKDKEPNASGEPDKDKEPDASGEP 588
Query: 417 GKEKDTERKVETEKEKLKGVEG 438
K+K+ + E EK+K G
Sbjct: 589 EKDKEPDASGEPEKDKDSDASG 610
>gi|195114438|ref|XP_002001774.1| GI17029 [Drosophila mojavensis]
gi|193912349|gb|EDW11216.1| GI17029 [Drosophila mojavensis]
Length = 5892
Score = 39.3 bits (90), Expect = 9.0, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 354 AAQDTAEVSADLGASPEGKSVEKGKDKEEKEK-EKAKDPDKEKGKGKDKEEKDKEKAKDP 412
A ++E + S KS D E + E + PDKE+ + + + EK+KEKA+
Sbjct: 1968 ANATSSEKRKNSATSQSSKSATPKVDDESSDSDEPLEKPDKEQSQQRLEREKEKEKAQHK 2027
Query: 413 DKEKGKEKDTERKVETEKEK 432
++++ ++++ E + + E+E+
Sbjct: 2028 ERQEREKREKELRKQQEREE 2047
>gi|430744766|ref|YP_007203895.1| carbohydrate binding protein [Singulisphaera acidiphila DSM 18658]
gi|430016486|gb|AGA28200.1| putative carbohydrate binding protein [Singulisphaera acidiphila
DSM 18658]
Length = 973
Score = 39.3 bits (90), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Query: 345 ASEPDQGQLAAQDTAEVSADLGASP-EGKSVEKGKDKEEKEKEKAKDPDKEKGKGKDKEE 403
A+ P + A D A+ + G SP + + EK KD + K+K K DK K KDK +
Sbjct: 306 AASPPATEAAKPDQAKAEKETGGSPVKENATEKAKDTDAKDKPKEDTKDKPKEDTKDKPK 365
Query: 404 KD-KEKAKDPDKEKGKEKDTERKVETEKEKLK 434
+D K+K K+ K+K KE ++ E K+K K
Sbjct: 366 EDTKDKPKEDTKDKPKEDAKDKPKEDTKDKPK 397
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.136 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,526,922,095
Number of Sequences: 23463169
Number of extensions: 554083556
Number of successful extensions: 5129540
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 10756
Number of HSP's successfully gapped in prelim test: 21406
Number of HSP's that attempted gapping in prelim test: 4029014
Number of HSP's gapped (non-prelim): 549366
length of query: 813
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 662
effective length of database: 8,816,256,848
effective search space: 5836362033376
effective search space used: 5836362033376
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 81 (35.8 bits)