BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003526
(813 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P69849|NOMO3_HUMAN Nodal modulator 3 OS=Homo sapiens GN=NOMO3 PE=2 SV=2
Length = 1222
Score = 312 bits (799), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 238/776 (30%), Positives = 375/776 (48%), Gaps = 97/776 (12%)
Query: 2 VLPNMASIADIKAISYDICG---VVR---TVGSGNKVKVALTHGPDKVKPQVK-QTDNNG 54
+ PN +ADI A + +CG ++R TV NK KV L+ DK K V +TD +G
Sbjct: 393 IAPNTPQLADIVATGFSVCGQISIIRFPDTVKQMNKYKVVLS-SQDKDKSLVTVETDAHG 451
Query: 55 NFCFEVPPGEYRLSAMAATPESSSGILFLP-PYADVVVKSPLLNIEFSQALVNVLGNVAC 113
+FCF+ PG Y++ M E+ +G+ P + V P++++ F Q L +V G V+C
Sbjct: 452 SFCFKANPGTYKVQVMVPEAETRAGLTLKPQTFPLTVTDRPVMDVAFVQFLASVSGKVSC 511
Query: 114 KERCGPLVTVTLMRLGQKHYDGTEKKTVSLTD--DSDQFLFRDVLPGKYRLEVKRTSREA 171
+ CG L+ VTL L ++ EK+++ L+ ++ F F +VLPGKY++ +
Sbjct: 512 LDTCGDLL-VTLQSLSRQ----GEKRSLQLSGKVNAMTFTFDNVLPGKYKISI------- 559
Query: 172 SSMEDNWCWEQSFIGVDVGTNDVKGVEFVQKGYWLNVISTHDVDAYMTQQDGSHVPLKV- 230
M ++WCW+ + V+V +DV VEF Q GY L +H + Q + +
Sbjct: 560 --MHEDWCWKNKSLEVEVLEDDVSAVEFRQTGYMLRCSLSHAITLEFYQDGNGRENVGIY 617
Query: 231 --KKGSQHICVESPGVHNLHFVNP--CVFFGSPVLKMDTSNPSPIYLKGEKYQLRGHIN- 285
KG C+ PGV+ V P C F DTS+PS + L ++ + G I
Sbjct: 618 NLSKGVNRFCLSKPGVYK---VTPRSCHRFEQAFYTYDTSSPSILTLTAIRHHVLGTITT 674
Query: 286 -------VQSRSPI------------GVHELP-ENIIVDILNGDGSISNRTTATLTSPAN 325
V +S I V EL E + +I + R
Sbjct: 675 DKMMDVTVTIKSSIDSEPALVLGPLKSVQELRREQQLAEI---EARRQEREKNGNEEGEE 731
Query: 326 DQTSYAV------------YGFSLWANLGDQLTFVPRDPRGNEEKKILFYPRQRQVSVTN 373
T V Y FS WA G+++T P K++LFYP + V+
Sbjct: 732 RMTKPPVQEMVDELQGPFSYDFSYWARSGEKITVTP------SSKELLFYPPSMEAVVSG 785
Query: 374 DGCQALIPAFSGRLGLYTEGSVSPPLSGVNIRIIAAEDSQIASLKKGHLALETSTGADGS 433
+ C + G+ GL+ EG + P L GV I I +E + L + T G+
Sbjct: 786 ESCPGKLIEIHGKAGLFLEGQIHPELEGVEIVI--SEKGASSPL------ITVFTDDKGA 837
Query: 434 FIGGPLYDDITYNVEASKPGYYLRQVGPN--SFSCQKLSQISVRIYSKDDAGEPIPSVLL 491
+ GPL+ D+ Y V + K GY L V F L+ +S I ++DD +P+P VLL
Sbjct: 838 YSVGPLHSDLEYTVTSQKEGYVLTAVEGTIGDFKAYALAGVSFEIKAEDD--QPLPGVLL 895
Query: 492 SLSGDDGYRNNSVSWAGGSFHFDNLFPGNFYLRPLLKEYAFSPPAQAIELGSGESREVIF 551
SLSG +R+N ++ G F NL PG +Y +P++KE+ F P +Q IE+ G++ ++
Sbjct: 896 SLSGGL-FRSNLLTQDNGILTFSNLSPGQYYFKPMMKEFRFEPSSQMIEVQEGQNLKITI 954
Query: 552 QATRVAYSATGTITLLSGQPKDGVSVEA--RSESKGYYEETVTDTSGSYRLRGLHPDTTY 609
R AYS GT++ L+G+P+ GV++EA +++ Y E+TVTD G +RLRGL P Y
Sbjct: 955 TGYRTAYSCYGTVSSLNGEPEQGVAMEAVGQNDCSIYGEDTVTDEEGKFRLRGLLPGCVY 1014
Query: 610 VIKVVKKDGFGSTKIERASPESVTVKVGSGDIKGLDFLVFEQPEKTILSGHVEGNRIKEL 669
+++ + G+ IERA P ++VG+ DI ++ +VF Q + LSG+V + E
Sbjct: 1015 HVQLKAE---GNDHIERALPHHRVIEVGNNDIDDVNIIVFRQINQFDLSGNVITS--SEY 1069
Query: 670 NSHLLVEIKSASDTSKVESVISLPMSNFFQVKDLPKG--KHLLQLRSSLPSSTHRF 723
L V++ + + +SL S FF L + +++ L S+LP S + +
Sbjct: 1070 LPTLWVKLYKSENLDNPIQTVSLGQSLFFHFPPLLRDGENYVVLLDSTLPRSQYDY 1125
>sp|Q5JPE7|NOMO2_HUMAN Nodal modulator 2 OS=Homo sapiens GN=NOMO2 PE=1 SV=1
Length = 1267
Score = 312 bits (799), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 238/776 (30%), Positives = 375/776 (48%), Gaps = 97/776 (12%)
Query: 2 VLPNMASIADIKAISYDICG---VVR---TVGSGNKVKVALTHGPDKVKPQVK-QTDNNG 54
+ PN +ADI A + +CG ++R TV NK KV L+ DK K V +TD +G
Sbjct: 393 IAPNTPQLADIVATGFSVCGRISIIRFPDTVKQMNKYKVVLS-SQDKDKSLVTVETDAHG 451
Query: 55 NFCFEVPPGEYRLSAMAATPESSSGILFLP-PYADVVVKSPLLNIEFSQALVNVLGNVAC 113
+FCF+ PG Y++ M E+ +G+ P + V P++++ F Q L +V G V+C
Sbjct: 452 SFCFKAKPGTYKVQVMVPEAETRAGLTLKPQTFPLTVTDRPVMDVAFVQFLASVSGKVSC 511
Query: 114 KERCGPLVTVTLMRLGQKHYDGTEKKTVSLTD--DSDQFLFRDVLPGKYRLEVKRTSREA 171
+ CG L+ VTL L ++ EK+++ L+ ++ F F +VLPGKY++ +
Sbjct: 512 LDTCGDLL-VTLQSLSRQ----GEKRSLQLSGKVNAMTFTFDNVLPGKYKISI------- 559
Query: 172 SSMEDNWCWEQSFIGVDVGTNDVKGVEFVQKGYWLNVISTHDVDAYMTQQDGSHVPLKV- 230
M ++WCW+ + V+V +DV VEF Q GY L +H + Q + +
Sbjct: 560 --MHEDWCWKNKSLEVEVLEDDVSAVEFRQTGYMLRCSLSHAITLEFYQDGNGRENVGIY 617
Query: 231 --KKGSQHICVESPGVHNLHFVNP--CVFFGSPVLKMDTSNPSPIYLKGEKYQLRGHIN- 285
KG C+ PGV+ V P C F DTS+PS + L ++ + G I
Sbjct: 618 NLSKGVNRFCLSKPGVYK---VTPRSCHRFEQAFYTYDTSSPSILTLTAIRHHVLGTITT 674
Query: 286 -------VQSRSPI------------GVHELP-ENIIVDILNGDGSISNRTTATLTSPAN 325
V +S I V EL E + +I + R
Sbjct: 675 DKMMDVTVTIKSSIDSEPALVLGPLKSVQELRREQQLAEI---EARRQEREKNGNEEGEE 731
Query: 326 DQTSYAV------------YGFSLWANLGDQLTFVPRDPRGNEEKKILFYPRQRQVSVTN 373
T V Y FS WA G+++T P K++LFYP + V+
Sbjct: 732 RMTKPPVQEMVDELQGPFSYDFSYWARSGEKITVTP------SSKELLFYPPSMEAVVSG 785
Query: 374 DGCQALIPAFSGRLGLYTEGSVSPPLSGVNIRIIAAEDSQIASLKKGHLALETSTGADGS 433
+ C + G+ GL+ EG + P L GV I I +E + L + T G+
Sbjct: 786 ESCPGKLIEIHGKAGLFLEGQIHPELEGVEIVI--SEKGASSPL------ITVFTDDKGA 837
Query: 434 FIGGPLYDDITYNVEASKPGYYLRQVGPN--SFSCQKLSQISVRIYSKDDAGEPIPSVLL 491
+ GPL+ D+ Y V + K GY L V F L+ +S I ++DD +P+P VLL
Sbjct: 838 YSVGPLHSDLEYTVTSQKEGYVLTAVEGTIGDFKAYALAGVSFEIKAEDD--QPLPGVLL 895
Query: 492 SLSGDDGYRNNSVSWAGGSFHFDNLFPGNFYLRPLLKEYAFSPPAQAIELGSGESREVIF 551
SLSG +R+N ++ G F NL PG +Y +P++KE+ F P +Q IE+ G++ ++
Sbjct: 896 SLSGGL-FRSNLLTQDNGILTFSNLSPGQYYFKPMMKEFRFEPSSQMIEVQEGQNLKITI 954
Query: 552 QATRVAYSATGTITLLSGQPKDGVSVEA--RSESKGYYEETVTDTSGSYRLRGLHPDTTY 609
R AYS GT++ L+G+P+ GV++EA +++ Y E+TVTD G +RLRGL P Y
Sbjct: 955 TGYRTAYSCYGTVSSLNGEPEQGVAMEAVGQNDCSIYGEDTVTDEEGKFRLRGLLPGCVY 1014
Query: 610 VIKVVKKDGFGSTKIERASPESVTVKVGSGDIKGLDFLVFEQPEKTILSGHVEGNRIKEL 669
+++ + G+ IERA P ++VG+ DI ++ +VF Q + LSG+V + E
Sbjct: 1015 HVQLKAE---GNDHIERALPHHRVIEVGNNDIDDVNIIVFRQINQFDLSGNVITS--SEY 1069
Query: 670 NSHLLVEIKSASDTSKVESVISLPMSNFFQVKDLPKG--KHLLQLRSSLPSSTHRF 723
L V++ + + +SL S FF L + +++ L S+LP S + +
Sbjct: 1070 LPTLWVKLYKSENLDNPIQTVSLGQSLFFHFPPLLRDGENYVVLLDSTLPRSQYDY 1125
>sp|Q15155|NOMO1_HUMAN Nodal modulator 1 OS=Homo sapiens GN=NOMO1 PE=1 SV=5
Length = 1222
Score = 311 bits (798), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 237/776 (30%), Positives = 375/776 (48%), Gaps = 97/776 (12%)
Query: 2 VLPNMASIADIKAISYDICG---VVR---TVGSGNKVKVALTHGPDKVKPQVK-QTDNNG 54
+ PN +ADI A + +CG ++R TV NK KV L+ DK K V +TD +G
Sbjct: 393 IAPNTPQLADIIATGFSVCGQISIIRFPDTVKQMNKYKVVLS-SQDKDKSLVTVETDAHG 451
Query: 55 NFCFEVPPGEYRLSAMAATPESSSGILFLP-PYADVVVKSPLLNIEFSQALVNVLGNVAC 113
+FCF+ PG Y++ M E+ +G+ P + V P++++ F Q L +V G V+C
Sbjct: 452 SFCFKAKPGTYKVQVMVPEAETRAGLTLKPQTFPLTVTNRPMMDVAFVQFLASVSGKVSC 511
Query: 114 KERCGPLVTVTLMRLGQKHYDGTEKKTVSLTD--DSDQFLFRDVLPGKYRLEVKRTSREA 171
+ CG L+ VTL L ++ EK+++ L+ ++ F F +VLPGKY++ +
Sbjct: 512 LDTCGDLL-VTLQSLSRQ----GEKRSLQLSGKVNAMTFTFDNVLPGKYKISI------- 559
Query: 172 SSMEDNWCWEQSFIGVDVGTNDVKGVEFVQKGYWLNVISTHDVDAYMTQQDGSHVPLKV- 230
M ++WCW+ + V+V +D+ VEF Q GY L +H + Q + +
Sbjct: 560 --MHEDWCWKNKSLEVEVLEDDMSAVEFRQTGYMLRCSLSHAITLEFYQDGNGRENVGIY 617
Query: 231 --KKGSQHICVESPGVHNLHFVNP--CVFFGSPVLKMDTSNPSPIYLKGEKYQLRGHIN- 285
KG C+ PGV+ V P C F DTS+PS + L ++ + G I
Sbjct: 618 NLSKGVNRFCLSKPGVYK---VTPRSCHRFEQAFYTYDTSSPSILTLTAIRHHVLGTITT 674
Query: 286 -------VQSRSPI------------GVHELP-ENIIVDILNGDGSISNRTTATLTSPAN 325
V +S I V EL E + +I + R
Sbjct: 675 DKMMDVTVTIKSSIDSEPALVLGPLKSVQELRREQQLAEI---EARRQEREKNGNEEGEE 731
Query: 326 DQTSYAV------------YGFSLWANLGDQLTFVPRDPRGNEEKKILFYPRQRQVSVTN 373
T V Y FS WA G+++T P K++LFYP + V+
Sbjct: 732 RMTKPPVQEMVDELQGPFSYDFSYWARSGEKITVTP------SSKELLFYPPSMEAVVSG 785
Query: 374 DGCQALIPAFSGRLGLYTEGSVSPPLSGVNIRIIAAEDSQIASLKKGHLALETSTGADGS 433
+ C + G+ GL+ EG + P L GV I I +E + L + T G+
Sbjct: 786 ESCPGKLIEIHGKAGLFLEGQIHPELEGVEIVI--SEKGASSPL------ITVFTDDKGA 837
Query: 434 FIGGPLYDDITYNVEASKPGYYLRQVGPN--SFSCQKLSQISVRIYSKDDAGEPIPSVLL 491
+ GPL+ D+ Y V + K GY L V F L+ +S I ++DD +P+P VLL
Sbjct: 838 YSVGPLHSDLEYTVTSQKEGYVLTAVEGTIGDFKAYALAGVSFEIKAEDD--QPLPGVLL 895
Query: 492 SLSGDDGYRNNSVSWAGGSFHFDNLFPGNFYLRPLLKEYAFSPPAQAIELGSGESREVIF 551
SLSG +R+N ++ G F NL PG +Y +P++KE+ F P +Q IE+ G++ ++
Sbjct: 896 SLSGGL-FRSNLLTQDNGILTFSNLSPGQYYFKPMMKEFRFEPSSQMIEVQEGQNLKITI 954
Query: 552 QATRVAYSATGTITLLSGQPKDGVSVEA--RSESKGYYEETVTDTSGSYRLRGLHPDTTY 609
R AYS GT++ L+G+P+ GV++EA +++ Y E+TVTD G +RLRGL P Y
Sbjct: 955 TGYRTAYSCYGTVSSLNGEPEQGVAMEAVGQNDCSIYGEDTVTDEEGKFRLRGLLPGCVY 1014
Query: 610 VIKVVKKDGFGSTKIERASPESVTVKVGSGDIKGLDFLVFEQPEKTILSGHVEGNRIKEL 669
+++ + G+ IERA P ++VG+ DI ++ +VF Q + LSG+V + E
Sbjct: 1015 HVQLKAE---GNDHIERALPHHRVIEVGNNDIDDVNIIVFRQINQFDLSGNVITS--SEY 1069
Query: 670 NSHLLVEIKSASDTSKVESVISLPMSNFFQVKDLPKG--KHLLQLRSSLPSSTHRF 723
L V++ + + +SL S FF L + +++ L S+LP S + +
Sbjct: 1070 LPTLWVKLYKSENLDNPIQTVSLGQSLFFHFPPLLRDGENYVVLLDSTLPRSQYDY 1125
>sp|Q6GQT9|NOMO1_MOUSE Nodal modulator 1 OS=Mus musculus GN=Nomo1 PE=1 SV=1
Length = 1214
Score = 203 bits (516), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 132/397 (33%), Positives = 210/397 (52%), Gaps = 28/397 (7%)
Query: 333 YGFSLWANLGDQLTFVPRDPRGNEEKKILFYPRQRQVSVTNDGCQALIPAFSGRLGLYTE 392
Y FS WA G+++T P K++LFYP + +V+ + C + G+ GL+ E
Sbjct: 743 YDFSYWARSGEKITVTP------SSKELLFYPPSMEATVSGESCPGKLIEIHGKAGLFLE 796
Query: 393 GSVSPPLSGVNIRIIAAEDSQIASLKKGHLALETSTGADGSFIGGPLYDDITYNVEASKP 452
G + P L GV I I +E + L + T G++ GPL+ D+ Y V + K
Sbjct: 797 GQIHPELEGVEIVI--SEKGASSPL------ITVFTDDKGAYSVGPLHSDLEYTVNSQKE 848
Query: 453 GYYLRQVGPN--SFSCQKLSQISVRIYSKDDAGEPIPSVLLSLSGDDGYRNNSVSWAGGS 510
GY L V F L+ +S I ++DD +P+P VLLSLSG +R+N ++ G
Sbjct: 849 GYVLTAVEGTVGDFKAYALAGVSFEIKAEDD--QPLPGVLLSLSGGV-FRSNLLTQDNGI 905
Query: 511 FHFDNLFPGNFYLRPLLKEYAFSPPAQAIELGSGESREVIFQATRVAYSATGTITLLSGQ 570
F NL PG +Y +P++KE+ F P +Q IE+ G++ + R AYS GT++ L+G+
Sbjct: 906 LTFSNLSPGQYYFKPMMKEFRFEPSSQMIEVQEGQNLRITITGFRTAYSCYGTVSSLNGE 965
Query: 571 PKDGVSVEA--RSESKGYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKDGFGSTKIERAS 628
P+ GV+VEA + + Y E+TVTD G +RLRGL P Y +++ + G+ IERA
Sbjct: 966 PEQGVAVEAVGQKDCSIYGEDTVTDEEGKFRLRGLLPGCMYHVQLKAE---GNDHIERAL 1022
Query: 629 PESVTVKVGSGDIKGLDFLVFEQPEKTILSGHVEGNRIKELNSHLLVEIKSASDTSKVES 688
P ++VG+ D+ ++ +VF Q + LSG+V + E S L V++ +
Sbjct: 1023 PHHRVIEVGNNDVDDVNIIVFRQINQFDLSGNVITS--SEYLSTLWVKLYKSESLDNPIQ 1080
Query: 689 VISLPMSNFFQVKDLPKG--KHLLQLRSSLPSSTHRF 723
+SL S FF L + +++ L ++LP S + +
Sbjct: 1081 TVSLGQSLFFHFPPLLRDGENYVVLLDTTLPRSQYDY 1117
Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 152/299 (50%), Gaps = 35/299 (11%)
Query: 2 VLPNMASIADIKAISYDICG---VVR---TVGSGNKVKVALTHGPDKVKPQVK-QTDNNG 54
+ PN +AD+ A + ICG +VR T+ +K +V L+ DK K + +D +G
Sbjct: 385 IAPNTPQLADLIATGFSICGQIAIVRSPDTIKQMSKYRVVLS-SQDKDKALLTVDSDAHG 443
Query: 55 NFCFEVPPGEYRLSAMAATPESSSGILFLPP-YADVVVKSPLLNIEFSQALVNVLGNVAC 113
+FCF+ PG Y++ + E+ +G++ P + V P++++ F Q L +V G V+C
Sbjct: 444 SFCFKAKPGAYKVQVVVPEAETRAGLMLKPQVFPLTVTNRPVMDVAFVQFLASVSGKVSC 503
Query: 114 KERCGPLVTVTLMRLGQKHYDGTEKKTVSLTD--DSDQFLFRDVLPGKYRLEVKRTSREA 171
+ CG L+ VTL L ++ EK+++ L+ +S F F VLPG+Y++ +
Sbjct: 504 LDTCGDLL-VTLQSLSRQ----GEKRSLQLSGKVNSMTFTFDKVLPGRYKISI------- 551
Query: 172 SSMEDNWCWEQSFIGVDVGTNDVKGVEFVQKGYWLNVISTHDVDAYMTQQDGS---HVPL 228
M ++WCW + V+V +DV VEF Q GY L +H + QDG+ +V +
Sbjct: 552 --MHEDWCWRNKSLEVEVLEDDVSAVEFRQTGYMLRCALSHAITLEF-HQDGNGPENVGI 608
Query: 229 -KVKKGSQHICVESPGVHNLHFVNP--CVFFGSPVLKMDTSNPSPIYLKGEKYQLRGHI 284
+ +G C+ PGV+ V P C F DTS+PS + L ++ + G I
Sbjct: 609 YNLSRGVNRFCLSKPGVYK---VTPRSCHRFEQAFYTYDTSSPSILTLTAIRHHVLGTI 664
>sp|Q8NXX5|SDRE_STAAW Serine-aspartate repeat-containing protein E OS=Staphylococcus
aureus (strain MW2) GN=sdrE PE=3 SV=1
Length = 1141
Score = 35.0 bits (79), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 68/155 (43%), Gaps = 25/155 (16%)
Query: 573 DGVSVEARSESKGYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKDGF------GSTKIER 626
DG + R+++KG+YE GL TY +K G+ G+T E+
Sbjct: 639 DGTTKSVRTDAKGHYE-----------FGGLKDGETYTVKFETPTGYLPTKVNGTTDGEK 687
Query: 627 ASP-ESVTVKVGSGDIKGLDFLVFEQPEKTILSGHV--EGNR--IKELNSHLLVEIKSA- 680
S SVTVK+ D LD +++P K L +V + N+ I++ N + ++K
Sbjct: 688 DSNGSSVTVKINGKDDMSLDTGFYKEP-KYNLGDYVWEDTNKDGIQDANEPGIKDVKVTL 746
Query: 681 -SDTSKVESVISLPMSNFFQVKDLPKGKHLLQLRS 714
T KV + S ++ DL G + ++ +
Sbjct: 747 KDSTGKVIGTTTTDASGKYKFTDLDNGNYTVEFET 781
>sp|Q6GBS4|SDRE_STAAS Serine-aspartate repeat-containing protein E OS=Staphylococcus
aureus (strain MSSA476) GN=sdrE PE=3 SV=1
Length = 1141
Score = 35.0 bits (79), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 68/155 (43%), Gaps = 25/155 (16%)
Query: 573 DGVSVEARSESKGYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKDGF------GSTKIER 626
DG + R+++KG+YE GL TY +K G+ G+T E+
Sbjct: 639 DGTTKSVRTDAKGHYE-----------FGGLKDGETYTVKFETPTGYLPTKVNGTTDGEK 687
Query: 627 ASP-ESVTVKVGSGDIKGLDFLVFEQPEKTILSGHV--EGNR--IKELNSHLLVEIKSA- 680
S SVTVK+ D LD +++P K L +V + N+ I++ N + ++K
Sbjct: 688 DSNGSSVTVKINGKDDMSLDTGFYKEP-KYNLGDYVWEDTNKDGIQDANEPGIKDVKVTL 746
Query: 681 -SDTSKVESVISLPMSNFFQVKDLPKGKHLLQLRS 714
T KV + S ++ DL G + ++ +
Sbjct: 747 KDSTGKVIGTTTTDASGKYKFTDLDNGNYTVEFET 781
>sp|Q6GJA6|BBP_STAAR Bone sialoprotein-binding protein OS=Staphylococcus aureus (strain
MRSA252) GN=bbp PE=3 SV=1
Length = 1137
Score = 34.7 bits (78), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 14/136 (10%)
Query: 592 TDTSGSYRLRGLHPDTTYVIKVVKKDGF------GSTKIERASP-ESVTVKVGSGDIKGL 644
TD +G Y GL TY +K G+ G+T E+ S SVTVK+ D L
Sbjct: 647 TDANGHYEFGGLKDGETYTVKFETPAGYLPTKENGTTDGEKDSNGSSVTVKINGKDDMSL 706
Query: 645 DFLVFEQPEKTILSGHV--EGNR--IKELNSHLLVEIKSA--SDTSKVESVISLPMSNFF 698
D +++P K L +V + N+ I++ N + ++K T KV + S +
Sbjct: 707 DTGFYKEP-KYNLGDYVWEDTNKDGIQDANEPGIKDVKVTLKDSTGKVIGTTTTDASGKY 765
Query: 699 QVKDLPKGKHLLQLRS 714
+ DL G + ++ +
Sbjct: 766 KFTDLDNGNYTVEFET 781
>sp|O86489|SDRE_STAAE Serine-aspartate repeat-containing protein E OS=Staphylococcus
aureus (strain Newman) GN=sdrE PE=1 SV=1
Length = 1166
Score = 34.7 bits (78), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 14/136 (10%)
Query: 592 TDTSGSYRLRGLHPDTTYVIKVVKKDGF------GSTKIERASP-ESVTVKVGSGDIKGL 644
TD +G Y GL TY +K G+ G+T E+ S SVTVK+ D L
Sbjct: 652 TDANGHYEFGGLKDGETYTVKFETPTGYLPTKVNGTTDGEKDSNGSSVTVKINGKDDMSL 711
Query: 645 DFLVFEQPEKTILSGHV--EGNR--IKELNSHLLVEIKSA--SDTSKVESVISLPMSNFF 698
D +++P K L +V + N+ I++ N + ++K T KV + S +
Sbjct: 712 DTGFYKEP-KYNLGDYVWEDTNKDGIQDANEPGIKDVKVTLKDSTGKVIGTTTTDASGKY 770
Query: 699 QVKDLPKGKHLLQLRS 714
+ DL G + ++ +
Sbjct: 771 KFTDLDNGNYTVEFET 786
>sp|Q5HIB2|SDRE_STAAC Serine-aspartate repeat-containing protein E OS=Staphylococcus
aureus (strain COL) GN=sdrE PE=3 SV=1
Length = 1166
Score = 34.3 bits (77), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 14/136 (10%)
Query: 592 TDTSGSYRLRGLHPDTTYVIKVVKKDGF------GSTKIERASP-ESVTVKVGSGDIKGL 644
TD +G Y GL TY +K G+ G+T E+ S SVTVK+ D L
Sbjct: 652 TDANGHYEFGGLKDGETYTVKFETPTGYLPTKVNGTTDGEKDSNGSSVTVKINGKDDMSL 711
Query: 645 DFLVFEQPEKTILSGHV--EGNR--IKELNSHLLVEIKSA--SDTSKVESVISLPMSNFF 698
D +++P K L +V + N+ I++ N + ++K T KV + S +
Sbjct: 712 DTGFYKEP-KYNLGDYVWEDTNKDGIQDANEPGIKDVKVTLKDSTGKVIGTTTTDASGKY 770
Query: 699 QVKDLPKGKHLLQLRS 714
+ DL G + ++ +
Sbjct: 771 KFTDLDNGNYTVEFET 786
>sp|Q14U76|BBP_STAAU Bone sialoprotein-binding protein OS=Staphylococcus aureus GN=bbp
PE=1 SV=1
Length = 1149
Score = 34.3 bits (77), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 14/136 (10%)
Query: 592 TDTSGSYRLRGLHPDTTYVIKVVKKDGF------GSTKIERASP-ESVTVKVGSGDIKGL 644
TD +G Y GL TY +K G+ G+T E+ S SVTVK+ D L
Sbjct: 647 TDANGHYEFGGLKDGETYTVKFETPAGYLPTKENGTTDGEKDSNGSSVTVKINGKDDMSL 706
Query: 645 DFLVFEQPEKTILSGHV--EGNR--IKELNSHLLVEIKSA--SDTSKVESVISLPMSNFF 698
D +++P K L +V + N+ I++ N + ++K T KV + S +
Sbjct: 707 DTGFYKEP-KYNLGDYVWEDTNKDGIQDANEPGIKDVKVTLKDSTGKVIGTTTTDASGKY 765
Query: 699 QVKDLPKGKHLLQLRS 714
+ DL G + ++ +
Sbjct: 766 KFTDLDNGNYTVEFET 781
>sp|Q2FJ77|SDRE_STAA3 Serine-aspartate repeat-containing protein E OS=Staphylococcus
aureus (strain USA300) GN=sdrE PE=3 SV=1
Length = 1154
Score = 34.3 bits (77), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 14/136 (10%)
Query: 592 TDTSGSYRLRGLHPDTTYVIKVVKKDGF------GSTKIERASP-ESVTVKVGSGDIKGL 644
TD +G Y GL TY +K G+ G+T E+ S SVTVK+ D L
Sbjct: 652 TDANGHYEFGGLKDGETYTVKFETPTGYLPTKVNGTTDGEKDSNGSSVTVKINGKDDMSL 711
Query: 645 DFLVFEQPEKTILSGHV--EGNR--IKELNSHLLVEIKSA--SDTSKVESVISLPMSNFF 698
D +++P K L +V + N+ I++ N + ++K T KV + S +
Sbjct: 712 DTGFYKEP-KYNLGDYVWEDTNKDGIQDANEPGIKDVKVTLKDSTGKVIGTTTTDASGKY 770
Query: 699 QVKDLPKGKHLLQLRS 714
+ DL G + ++ +
Sbjct: 771 KFTDLDNGNYTVEFET 786
>sp|Q932F7|SDRE_STAAM Serine-aspartate repeat-containing protein E OS=Staphylococcus
aureus (strain Mu50 / ATCC 700699) GN=sdrE PE=3 SV=1
Length = 1141
Score = 33.9 bits (76), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 14/136 (10%)
Query: 592 TDTSGSYRLRGLHPDTTYVIKVVKKDGF------GSTKIERASP-ESVTVKVGSGDIKGL 644
TD +G Y GL TY +K G+ G+T E+ S S+TVK+ D L
Sbjct: 647 TDANGHYEFGGLKDGETYTVKFETPAGYLPTKVNGTTDGEKDSNGSSITVKINGKDDMSL 706
Query: 645 DFLVFEQPEKTILSGHV--EGNR--IKELNSHLLVEIKSA--SDTSKVESVISLPMSNFF 698
D +++P K L +V + N+ I++ N + ++K T KV + S +
Sbjct: 707 DTGFYKEP-KYNLGDYVWEDTNKDGIQDANEPGIKDVKVTLKDSTGKVIGTTTTDASGKY 765
Query: 699 QVKDLPKGKHLLQLRS 714
+ DL G + ++ +
Sbjct: 766 KFTDLDNGNYTVEFET 781
>sp|Q99W46|SDRE_STAAN Serine-aspartate repeat-containing protein E OS=Staphylococcus
aureus (strain N315) GN=sdrE PE=1 SV=1
Length = 1141
Score = 33.9 bits (76), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 14/136 (10%)
Query: 592 TDTSGSYRLRGLHPDTTYVIKVVKKDGF------GSTKIERASP-ESVTVKVGSGDIKGL 644
TD +G Y GL TY +K G+ G+T E+ S S+TVK+ D L
Sbjct: 647 TDANGHYEFGGLKDGETYTVKFETPAGYLPTKVNGTTDGEKDSNGSSITVKINGKDDMSL 706
Query: 645 DFLVFEQPEKTILSGHV--EGNR--IKELNSHLLVEIKSA--SDTSKVESVISLPMSNFF 698
D +++P K L +V + N+ I++ N + ++K T KV + S +
Sbjct: 707 DTGFYKEP-KYNLGDYVWEDTNKDGIQDANEPGIKDVKVTLKDSTGKVIGTTTTDASGKY 765
Query: 699 QVKDLPKGKHLLQLRS 714
+ DL G + ++ +
Sbjct: 766 KFTDLDNGNYTVEFET 781
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.134 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 315,899,604
Number of Sequences: 539616
Number of extensions: 14238504
Number of successful extensions: 30269
Number of sequences better than 100.0: 33
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 30061
Number of HSP's gapped (non-prelim): 185
length of query: 813
length of database: 191,569,459
effective HSP length: 126
effective length of query: 687
effective length of database: 123,577,843
effective search space: 84897978141
effective search space used: 84897978141
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 66 (30.0 bits)