BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003529
(813 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SFX2|PUB43_ARATH U-box domain-containing protein 43 OS=Arabidopsis thaliana GN=PUB43
PE=2 SV=1
Length = 811
Score = 1055 bits (2729), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 539/814 (66%), Positives = 668/814 (82%), Gaps = 8/814 (0%)
Query: 2 AGSWDGGYDSGSQSDGSYHFERLHIEPIYDAFVCPLTKQVMRDPVTLENGQTFEREAIEK 61
+GSWDG SQSD S FE I+ IY+AF+CPLTKQVM +PVTLENGQTFEREAIEK
Sbjct: 4 SGSWDG-----SQSDNSSQFEP-GIDNIYEAFICPLTKQVMHNPVTLENGQTFEREAIEK 57
Query: 62 WFKECRENGRKPVCPLTQKELRSTDLNPSIALRNTIEEWNARNEAAQLDMARKSLNLGSS 121
WF+ECRENG+ CP+T KEL TDL+PSIALRNTIEEW ARN+A +LD+AR+SL LG++
Sbjct: 58 WFQECRENGQPLSCPITSKELSITDLSPSIALRNTIEEWRARNDALKLDIARQSLYLGNA 117
Query: 122 ESDIMPALKYVQYFCQSSRSNKHVVHNSELIPMIIDMLKSSSRKVRCTALETLRIVVEED 181
E++I+ ALK V+ C++ R + V N +L+ +I DMLKSSS +VRC AL+TL++VVE D
Sbjct: 118 ETNILLALKNVREICRNIRKIRQRVCNPQLVRLITDMLKSSSHEVRCKALQTLQVVVEGD 177
Query: 182 DDNKEILGQGDTVRTIVKFLSHELSREREEAVSLLYELSKSEALCEKIGSINGAILILVG 241
+++K I+ +GDTVRTIVKFLS E S+ RE AVS+L+ELSKSEALCEKIGSI+GAI++LVG
Sbjct: 178 EESKAIVAEGDTVRTIVKFLSQEPSKGREAAVSVLFELSKSEALCEKIGSIHGAIILLVG 237
Query: 242 MTSSKSENLLTVEKAEKTLANLEKCENNVRQMAENGRLQPLLTQILEGPQETKLSLAAFL 301
+TSSKSEN+ TVEKA+KTL NLE+ E NVRQMA NGRLQPLL ++LEG ETK+S+A +L
Sbjct: 238 LTSSKSENVSTVEKADKTLTNLERSEENVRQMAINGRLQPLLAKLLEGSPETKVSMAFYL 297
Query: 302 GDLALNSDVKVLVARTVGSCLINIMKSGNMQAREAALKALNQISSCEPSAKVLIHAGILP 361
G LALN+DVKV+VA+TVGS LI++M++ +M REAAL ALN ISS E SAK+LI+ GILP
Sbjct: 298 GVLALNNDVKVIVAQTVGSSLIDLMRTRDMSQREAALGALNNISSFEGSAKLLINTGILP 357
Query: 362 PLVKDLFTVGSNHLPMRLKEVSATILANVVNSGHDFDSITVGPDNQTLVSEDIVHNLLHL 421
PL+KDLF VG N LP+RLKEVSATILAN+VN G+DFD + VGP +QTLVSE+IV NLL L
Sbjct: 358 PLIKDLFYVGPNQLPIRLKEVSATILANIVNIGYDFDKVPVGPHHQTLVSEEIVENLLQL 417
Query: 422 ISNTGPTIECKLLQVLVGLTSSPTTVLSVVSAIKSSGATISLVQFVEAPQN-DLRLASIE 480
SNTGP I+ KLL VLVGLTS P +V++VVSAI++S A ISLVQFVE +N DLRLASI+
Sbjct: 418 TSNTGPEIQGKLLAVLVGLTSCPNSVINVVSAIRNSAAIISLVQFVEIHENDDLRLASIK 477
Query: 481 LIQNLSPHMGHELADALRGAVGQLGSLIRVISENV-GISKEQAAAVGLLAELPERDLGLT 539
L+ N+SPHM ELA+ALR VGQLGSL+ +ISEN I++EQAAA GLLAELPERDL LT
Sbjct: 478 LLHNISPHMSEELANALRSTVGQLGSLVSIISENTPTITEEQAAAAGLLAELPERDLVLT 537
Query: 540 RQMLDEGAFGLIFSRVKSIQLGETRGSRFVTPFLEGLLSVLARVTFVLSDEPDAIALCCE 599
++L EGAF I S++ I+ GE RG RF FLEGL+S+LAR+TF L+ E DA CCE
Sbjct: 538 MRLLREGAFEKIISKIVGIRQGEIRGIRFERTFLEGLVSILARITFALTKETDATLFCCE 597
Query: 600 HNLAALFIELLQSNGLDKVQMVSATALENLSLESKNLTKLPELPPSGFCASIFPCFSKQP 659
NL +LF++LLQSN D +Q SATALENLSLESKNLTK+PELPP +C SIF C SK P
Sbjct: 598 KNLPSLFLDLLQSNSQDNIQRASATALENLSLESKNLTKIPELPPPTYCVSIFSCLSKPP 657
Query: 660 VITGLCRLHRGLCSLKETFCLLEGHAVEKLIALLDHTNEKVVEASLAALSTVIDDGVDIE 719
V+ G+C++H+G+CS++E+FCL+EG AV+KL+ LLDH N+KVV +LAALST+++DG+D+
Sbjct: 658 VVLGICKIHQGICSVRESFCLVEGQAVDKLVDLLDHENDKVVGPALAALSTLLEDGLDVV 717
Query: 720 QGVMVLCEAQGIKPILDVLLEKRTENLQRRAVWVVERILRTDDIAYEVSGDPNVSTALVD 779
QGV ++ EA GI PIL+VLLE RTENL+ RAVW+VERILR ++IA EV + NV+ ALVD
Sbjct: 718 QGVRLIDEADGITPILNVLLENRTENLRIRAVWMVERILRIEEIAREVGEEQNVTAALVD 777
Query: 780 AFQHADYRTRQIAERALKHIDKIPNFSGIFPNMG 813
AFQ+AD+RTRQIAE+AL+HIDKIPNFSGIF N+G
Sbjct: 778 AFQNADFRTRQIAEKALRHIDKIPNFSGIFTNIG 811
>sp|Q9LM76|PUB44_ARATH U-box domain-containing protein 44 OS=Arabidopsis thaliana GN=PUB44
PE=1 SV=1
Length = 801
Score = 1028 bits (2659), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 530/795 (66%), Positives = 657/795 (82%), Gaps = 9/795 (1%)
Query: 20 HFERLHIEPIYDAFVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQ 79
HFER ++ IY+AF+CPLTK+VM DPVTLENG+TFEREAIEKWFKECR++GR P CPLT
Sbjct: 15 HFER-GVDHIYEAFICPLTKEVMHDPVTLENGRTFEREAIEKWFKECRDSGRPPSCPLTS 73
Query: 80 KELRSTDLNPSIALRNTIEEWNARNEAAQLDMARKSLNLGSSESDIMPALKYVQYFCQSS 139
+EL STD++ SIALRNTIEEW +RN+AA+LD+AR+SL LG++E+DI+ AL +V+ C++
Sbjct: 74 QELTSTDVSASIALRNTIEEWRSRNDAAKLDIARQSLFLGNAETDILQALMHVRQICRTI 133
Query: 140 RSNKHVVHNSELIPMIIDMLKSSSRKVRCTALETLRIVVEEDDDNKEILGQGDTVRTIVK 199
RSN+H V NS+LI MIIDMLKS+S +VR AL+TL++VVE DD++K I+ +GDTVRT+VK
Sbjct: 134 RSNRHGVRNSQLIHMIIDMLKSTSHRVRYKALQTLQVVVEGDDESKAIVAEGDTVRTLVK 193
Query: 200 FLSHELSREREEAVSLLYELSKSEALCEKIGSINGAILILVGMTSSKSENLLTVEKAEKT 259
FLSHE S+ RE AVSLL+ELSKSEALCEKIGSI+GA+++LVG+TSS SEN+ VEKA++T
Sbjct: 194 FLSHEPSKGREAAVSLLFELSKSEALCEKIGSIHGALILLVGLTSSNSENVSIVEKADRT 253
Query: 260 LANLEKCENNVRQMAENGRLQPLLTQILEGPQETKLSLAAFLGDLALNSDVKVLVARTVG 319
L N+E+ E VRQMA GRLQPLL ++LEG ETKLS+A+FLG+L LN+DVKVLVA+TVG
Sbjct: 254 LENMERSEEIVRQMASYGRLQPLLGKLLEGSPETKLSMASFLGELPLNNDVKVLVAQTVG 313
Query: 320 SCLINIMKSGNMQAREAALKALNQISSCEPSAKVLIHAGILPPLVKDLFTVGSNHLPMRL 379
S L+++M+SG+M REAALKALN+ISS E SAKVLI GILPPL+KDLF VG N+LP+RL
Sbjct: 314 SSLVDLMRSGDMPQREAALKALNKISSFEGSAKVLISKGILPPLIKDLFYVGPNNLPIRL 373
Query: 380 KEVSATILANVVNSGHDFDSITVGPDNQTLVSEDIVHNLLHLISNTGPTIECKLLQVLVG 439
KEVSATILAN+VN G+DF D TLVSE+ V NLLHLISNTGP I+CKLL+VLVG
Sbjct: 374 KEVSATILANIVNIGYDF-------DKATLVSENRVENLLHLISNTGPAIQCKLLEVLVG 426
Query: 440 LTSSPTTVLSVVSAIKSSGATISLVQFVEAPQN-DLRLASIELIQNLSPHMGHELADALR 498
LTS P TV VV AIK+SGA ISLVQF+E +N DLRLASI+L+ NLSP M ELA AL
Sbjct: 427 LTSCPKTVPKVVYAIKTSGAIISLVQFIEVRENDDLRLASIKLLHNLSPFMSEELAKALC 486
Query: 499 GAVGQLGSLIRVISENVGISKEQAAAVGLLAELPERDLGLTRQMLDEGAFGLIFSRVKSI 558
G GQLGSL+ +ISE I++EQAAA GLLAELP+RDLGLT++ML+ GAF I S+V I
Sbjct: 487 GTAGQLGSLVAIISEKTPITEEQAAAAGLLAELPDRDLGLTQEMLEVGAFEKIISKVFGI 546
Query: 559 QLGETRGSRFVTPFLEGLLSVLARVTFVLSDEPDAIALCCEHNLAALFIELLQSNGLDKV 618
+ G+ +G RFV PFLEGL+ +LAR+TFV + E AI C EH++A+LF+ LLQSNG D +
Sbjct: 547 RQGDIKGMRFVNPFLEGLVRILARITFVFNKEARAINFCREHDVASLFLHLLQSNGQDNI 606
Query: 619 QMVSATALENLSLESKNLTKLPELPPSGFCASIFPCFSKQPVITGLCRLHRGLCSLKETF 678
QMVSA ALENLSLES LT++P+ PP +C SIF C K V+ GLC++H+G+CSL+ETF
Sbjct: 607 QMVSAMALENLSLESIKLTRMPDPPPVNYCGSIFSCVRKPHVVNGLCKIHQGICSLRETF 666
Query: 679 CLLEGHAVEKLIALLDHTNEKVVEASLAALSTVIDDGVDIEQGVMVLCEAQGIKPILDVL 738
CL+EG AVEKL+ALLDH N KVVEA+LAALS++++DG+D+E+GV +L EA GI+ IL+VL
Sbjct: 667 CLVEGGAVEKLVALLDHENVKVVEAALAALSSLLEDGLDVEKGVKILDEADGIRHILNVL 726
Query: 739 LEKRTENLQRRAVWVVERILRTDDIAYEVSGDPNVSTALVDAFQHADYRTRQIAERALKH 798
E RTE L RRAVW+VERILR +DIA EV+ + ++S ALVDAFQ+AD+RTRQIAE ALKH
Sbjct: 727 RENRTERLTRRAVWMVERILRIEDIAREVAEEQSLSAALVDAFQNADFRTRQIAENALKH 786
Query: 799 IDKIPNFSGIFPNMG 813
IDKIPNFS IFPN+
Sbjct: 787 IDKIPNFSSIFPNIA 801
>sp|Q9CAA7|PUB42_ARATH Putative U-box domain-containing protein 42 OS=Arabidopsis thaliana
GN=PUB42 PE=2 SV=1
Length = 1033
Score = 518 bits (1333), Expect = e-145, Method: Compositional matrix adjust.
Identities = 292/790 (36%), Positives = 482/790 (61%), Gaps = 12/790 (1%)
Query: 26 IEPIYDAFVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRST 85
+EP Y AF+CPLTK++M DPVT E G T ER+A+ +WF + N + CP+T ++L +T
Sbjct: 243 MEPPYQAFICPLTKEIMEDPVTTETGVTCERQAVIEWF-DSFGNSDEINCPVTGQKL-TT 300
Query: 86 DLNPSIALRNTIEEWNARNEAAQLDMARKSLNLGSSESDIMPALKYVQYFCQSSRSNKHV 145
+L+ ++ L+ I+EW RNEAA++ +A +L+LG SES ++ AL+ +Q C+ NK
Sbjct: 301 ELSANVVLKTIIQEWKVRNEAARIKVAHAALSLGGSESMVIDALRDLQMTCEGKEYNKVQ 360
Query: 146 VHNSELIPMIIDMLKSSSRKVRCTALETLRIVV-EEDDDNKEILGQGDTVRTIVKFLSHE 204
V + +I ++ L S+ VR L+ LR + EE DD KE++ + T+ ++K L
Sbjct: 361 VREAGIIQLLDRYLTYRSKDVRFELLKFLRTLADEETDDGKEMIVKTITMSCVIKLLGSS 420
Query: 205 LSREREEAVSLLYELSKSEALCEKIGSINGAILILVGMTSSKSENLLTVEKAEKTLANLE 264
R A +LL ELSKS+ CEKIG+ GAIL+LV ++ + E +++ L NLE
Sbjct: 421 HQPVRHAAQALLLELSKSQHACEKIGTARGAILMLVTAKYNRELDSFASETSDQILRNLE 480
Query: 265 KCENNVRQMAENGRLQPLLTQILEGPQETKLSLAAFLGDLALNSDVKVLVARTVGSCLIN 324
KC N++QMAE+G L+PLL + EG +ET++++AA+L ++ + + K VA LI
Sbjct: 481 KCPENIKQMAESGLLEPLLGHLAEGSEETQVAMAAYLVEIDIGHEKKTYVAEKACPALIG 540
Query: 325 IMKSGNMQAREAALKALNQISSCEPSAKVLIHAGILPPLVKDLFTVGSNHLPMRLKEVSA 384
+++S N+ AR AA KAL IS P+ K+L+ GI+ +V+++FT M + +A
Sbjct: 541 LVQSENIDARRAAFKALAHISLYHPNNKILVEVGIIKIMVEEMFTKRVFSDLMNSRNEAA 600
Query: 385 TILANVVNSGHDFDSITVGPDNQTLVSEDIVHNLLHLISNTGP-TIECKLLQVLVGLTSS 443
TILAN++ SG + ++ V TL S+ V+N++H++ N+ P + L+++L+ L+ S
Sbjct: 601 TILANILESGLEHETFEVNTHGHTLGSDYFVYNIIHMLKNSSPDDLNIDLIRILLSLSKS 660
Query: 444 PTTVLSVVSAIKSSGATISLVQFVEAPQNDLRLASIELIQNLSPHMGHELADALRGAVGQ 503
P + ++VS IK + A+ ++++ + P ++L + +++L+ L+P++GH L++ L GQ
Sbjct: 661 PRAMATIVSVIKETDASFAMIELINNPHDELGVGALKLLIALTPYIGHTLSERLCKTRGQ 720
Query: 504 LGSLIRVISENVGISKEQAAAVGLLAELPERDLGLTRQMLDEGAFGLIFSRVKSIQLGET 563
+LI+ E I+++ A + LLA+LP ++L L +++E I + IQ
Sbjct: 721 PENLIQCPVEANQITEKHAVSAKLLAKLPHQNLTLNLALVNESIVSEILHAIHLIQRSGA 780
Query: 564 RGSRFVTPFLEGLLSVLARVTFVLSDEPDAIALCCEHNLAALFIELLQSNGLDKVQMVSA 623
R SR+ T FLEGL+ +L R T L EP + L H+L ++F++LL D+VQ +SA
Sbjct: 781 RTSRYATDFLEGLVGILVRFTTTLY-EPQMMYLARNHDLTSVFVDLLMKTSSDEVQRLSA 839
Query: 624 TALENLSLESKNLTKLPELPPSGFCASI-----FPCFSKQPVITGLCRLHRGLCSLKETF 678
T LENLS + L++ P+ + F S+ F S + +C +HRG+CS K TF
Sbjct: 840 TGLENLSSTTMTLSRPPQPRSTKFMGSLSMPRSFSLRSSKKKQIEICAIHRGVCSAKNTF 899
Query: 679 CLLEGHAVEKLIALLDHTNEKVVEASLAALSTVIDDGVDIEQGVMVLCEAQGIKPILDVL 738
CL+E +A+ KL+A L +VVE++LAA+ T++DD V++E+ + +L E ++ IL+ +
Sbjct: 900 CLVEANAITKLLACLQSDKVEVVESALAAICTLLDDKVEVEKSLSMLSEMNAVQLILNAV 959
Query: 739 LEKRTENLQRRAVWVVER-ILR-TDDIAYEVSGDPNVSTALVDAFQHADYRTRQIAERAL 796
E + E+L ++A W++++ I+R D A E+S D +S LV AF D TRQ+AE L
Sbjct: 960 KEHKKESLLQKAFWMIDKFIIRGGDKYASEISQDRMLSGMLVSAFHRGDGNTRQMAENIL 1019
Query: 797 KHIDKIPNFS 806
+ +DK+P+FS
Sbjct: 1020 RRLDKMPSFS 1029
>sp|Q9SNC6|PUB13_ARATH U-box domain-containing protein 13 OS=Arabidopsis thaliana GN=PUB13
PE=1 SV=1
Length = 660
Score = 93.2 bits (230), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 165/371 (44%), Gaps = 50/371 (13%)
Query: 29 IYDAFVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTDLN 88
I D F CP++ ++MRDPV + +GQT+ER IEKW + G CP TQ+ L ST L
Sbjct: 256 IPDDFRCPISLEMMRDPVIVSSGQTYERTCIEKWIE-----GGHSTCPKTQQALTSTTLT 310
Query: 89 PSIALRNTIEEWNARNEAAQLDMARKSLNLGSSESDIMPALKYVQYFCQSSRSNKHVVHN 148
P+ LR+ I +W N+ + S + P + V F + +NK
Sbjct: 311 PNYVLRSLIAQWCEAND----------IEPPKPPSSLRP--RKVSSFSSPAEANK----- 353
Query: 149 SELIPMIIDMLKSSSRKVRCTALETLRIVVEEDDDNKEILGQGDTVRTIVKFLSHELSRE 208
I ++ L + + + +A +R++ + + DN+ + + + +V LS SR
Sbjct: 354 ---IEDLMWRLAYGNPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRI 410
Query: 209 REEAVSLLYELSKSEALCEK-------IGSINGAILILVGMTSSKSENLLTVEKAEKTLA 261
+E +V+ L LS +CE G+I G + +L K ++ E A TL
Sbjct: 411 QEHSVTALLNLS----ICENNKGAIVSAGAIPGIVQVL------KKGSMEARENAAATLF 460
Query: 262 NLEKCENNVRQMAENGRLQPLLTQILEGPQETKLSLAAFLGDLAL--NSDVKVLVARTVG 319
+L + N + G + PL+ + EG Q K A L +L + + K + A +
Sbjct: 461 SLSVIDENKVTIGALGAIPPLVVLLNEGTQRGKKDAATALFNLCIYQGNKGKAIRAGVIP 520
Query: 320 SCLINIMKSGNMQAREAALKALNQISSCEPSAKVLIHAGILPPLVKDLFTVGSNHLPMRL 379
+ + + G+ EA A+ I S P K +I + P + + GS R
Sbjct: 521 TLTRLLTEPGSGMVDEAL--AILAILSSHPEGKAIIGSSDAVPSLVEFIRTGSP----RN 574
Query: 380 KEVSATILANV 390
+E +A +L ++
Sbjct: 575 RENAAAVLVHL 585
>sp|Q681N2|PUB15_ARATH U-box domain-containing protein 15 OS=Arabidopsis thaliana GN=PUB15
PE=2 SV=2
Length = 660
Score = 91.3 bits (225), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 152/332 (45%), Gaps = 79/332 (23%)
Query: 33 FVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTDLNPSIA 92
F+CP+T ++M DPV + GQT+E+E+I+KWF + G K CP T++EL L P+ A
Sbjct: 294 FLCPITLEIMLDPVIIATGQTYEKESIQKWF----DAGHK-TCPKTRQELDHLSLAPNFA 348
Query: 93 LRNTIEEWNARNEAAQLDMARKSLNLGSSESDIMPALKYVQYFCQSSRSNKHVVHNSELI 152
L+N I +W +N N E ++ P + Q + +
Sbjct: 349 LKNLIMQWCEKN------------NFKIPEKEVSPDSQNEQ---------------KDEV 381
Query: 153 PMIIDMLKSSSRKVRCTALETLRIVVEEDDDNKEILGQGDTVRTIVKFLSHELSREREEA 212
++++ L SS + + +++ +R++ E+ +N+ ++ + +V+ LS+ S +E A
Sbjct: 382 SLLVEALSSSQLEEQRRSVKQMRLLARENPENRVLIANAGAIPLLVQLLSYPDSGIQENA 441
Query: 213 VSLLYELSKSEALCEKIGSINGAILILVGMTSSKSENLLTVEKAEKTLANLEKCENNVRQ 272
V+ L LS E + +K+ S GAI
Sbjct: 442 VTTLLNLSIDE-VNKKLISNEGAI------------------------------------ 464
Query: 273 MAENGRLQPLLTQILE-GPQETKLSLAAFLGDLALNSDVKVLVARTVG-SCLINIMKSGN 330
P + +ILE G +E + + AA L L++ + KV + + G L+++++ G
Sbjct: 465 --------PNIIEILENGNREARENSAAALFSLSMLDENKVTIGLSNGIPPLVDLLQHGT 516
Query: 331 MQAREAALKALNQISSCEPSAKVLIHAGILPP 362
++ ++ AL AL +S + I AGI+ P
Sbjct: 517 LRGKKDALTALFNLSLNSANKGRAIDAGIVQP 548
>sp|Q5VRH9|PUB12_ORYSJ U-box domain-containing protein 12 OS=Oryza sativa subsp. japonica
GN=PUB12 PE=2 SV=1
Length = 611
Score = 87.8 bits (216), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 168/366 (45%), Gaps = 38/366 (10%)
Query: 25 HIEPIY-DAFVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELR 83
H PI D F CP++ ++M+DPV + +GQT+ER I+KW ++G K CP TQ+ L
Sbjct: 223 HRSPIIPDEFRCPISLELMQDPVIVSSGQTYERSCIQKWL----DSGHK-TCPKTQQPLS 277
Query: 84 STDLNPSIALRNTIEEWNARNEAAQLDMARKSLNLGSSESDIMPALKYVQYFCQSSRSNK 143
T L P+ L++ I +W EA +++ + N + ++ K
Sbjct: 278 HTSLTPNFVLKSLISQW---CEANGIELPKNKQN------------------SRDKKAAK 316
Query: 144 HVVHNSELIPMIIDMLKSSSRKVRCTALETLRIVVEEDDDNKEILGQGDTVRTIVKFLSH 203
++ + +++ L+S ++ + A +R++ + + +N+ + + + +V LS
Sbjct: 317 SSDYDHAGLVSLMNRLRSGNQDEQRAAAGEIRLLAKRNVNNRICIAEAGAIPLLVNLLSS 376
Query: 204 ELSREREEAVSLLYELSKSEALCEKIGSINGAILILVGMTSSKSENLLTVEKAEKTLANL 263
R +E AV+ L LS E SI + I + K+ ++ T E A TL +L
Sbjct: 377 SDPRTQEHAVTALLNLSIHE---NNKASIVDSHAIPKIVEVLKTGSMETRENAAATLFSL 433
Query: 264 EKCENNVRQMAENGRLQPLLTQILEGPQETKLSLAAFLGDLALNSDVKVLVART-VGSCL 322
+ N + G + PL+ + +G K A + +L + KV + + L
Sbjct: 434 SVVDENKVTIGAAGAIPPLINLLCDGSPRGKKDAATAIFNLCIYQGNKVRAVKAGIVIHL 493
Query: 323 INIMKSGNMQAREAALKALNQISSCEPSAKVLI-HAGILPPLVKDLFTVGSNHLPMRLKE 381
+N + + AL L+ I + P K++I + +PPLV ++ GS R +E
Sbjct: 494 MNFLVDPTGGMIDEALSLLS-ILAGNPEGKIVIARSEPIPPLV-EVIKTGSP----RNRE 547
Query: 382 VSATIL 387
+A IL
Sbjct: 548 NAAAIL 553
>sp|Q8GUG9|PUB11_ARATH U-box domain-containing protein 11 OS=Arabidopsis thaliana GN=PUB11
PE=2 SV=2
Length = 612
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 168/369 (45%), Gaps = 34/369 (9%)
Query: 15 SDGSYHFERLHIEPIYDAFVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPV 74
+D S ++L I P+ F+CP++ ++M+DPV + GQT+ER I++W +C
Sbjct: 230 TDESKKSDKLTI-PV--DFLCPVSLELMKDPVIVATGQTYERAYIQRWI-DC----GNLT 281
Query: 75 CPLTQKELRSTDLNPSIALRNTIEEWNARNEAAQ--------------LDMARKSLNLGS 120
CP TQ++L + L P+ LR+ I W A + Q + + R + S
Sbjct: 282 CPKTQQKLENFTLTPNYVLRSLISRWCAEHNIEQPAGYINGRTKNSGDMSVIRALVQRLS 341
Query: 121 SES--DIMPALKYVQYFCQSSRSNKHVVHNSELIPMIIDMLKSSSRKVRCTALE-TLRIV 177
S S D A+ ++ + S N+ ++ + IP+++++L S + A+ L +
Sbjct: 342 SRSTEDRRNAVSEIRSLSKRSTDNRILIAEAGAIPVLVNLLTSEDVATQENAITCVLNLS 401
Query: 178 VEEDDDNKEILGQGDTVRTIVKFLSHELSREREEAVSLLYELSKSEALCEKIGSINGAIL 237
+ E +NKE++ V +IV+ L RE A + L+ LS ++ IG +GAI
Sbjct: 402 IYE--NNKELIMFAGAVTSIVQVLRAGTMEARENAAATLFSLSLADENKIIIGG-SGAIP 458
Query: 238 ILVGMTSSKSENLLTVEKAEKTLANLEKCENNVRQMAENGRLQPLLTQILEGPQETKLSL 297
LV + + + + A L NL N + G + L+ + + + +
Sbjct: 459 ALVDLLENGTPR--GKKDAATALFNLCIYHGNKGRAVRAGIVTALVKMLSDSTRHRMVDE 516
Query: 298 A-AFLGDLALNSDVK-VLVARTVGSCLINIMKSGNMQAREAALKALNQISSCEPSAKVLI 355
A L LA N D K +V LI I+++ + RE A L +S C+ + LI
Sbjct: 517 ALTILSVLANNQDAKSAIVKANTLPALIGILQTDQTRNRENAAAIL--LSLCKRDTEKLI 574
Query: 356 HAGILPPLV 364
G L +V
Sbjct: 575 TIGRLGAVV 583
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 101/206 (49%), Gaps = 7/206 (3%)
Query: 189 GQGDTVRTIVKFLSHELSREREEAVSLLYELSKSEALCEKIGSINGAILILVGMTSSKSE 248
G +R +V+ LS + +R AVS + LSK + + GAI +LV + +S E
Sbjct: 328 GDMSVIRALVQRLSSRSTEDRRNAVSEIRSLSKRSTDNRILIAEAGAIPVLVNLLTS--E 385
Query: 249 NLLTVEKAEKTLANLEKCENNVRQMAENGRLQPLLTQILEGPQETKLSLAAFLGDLALNS 308
++ T E A + NL ENN + G + ++ + G E + + AA L L+L
Sbjct: 386 DVATQENAITCVLNLSIYENNKELIMFAGAVTSIVQVLRAGTMEARENAAATLFSLSLAD 445
Query: 309 DVKVLVARTVG-SCLINIMKSGNMQAREAALKALNQISSCEPSAKVLIHAGILPPLVKDL 367
+ K+++ + L++++++G + ++ A AL + + + AGI+ LVK L
Sbjct: 446 ENKIIIGGSGAIPALVDLLENGTPRGKKDAATALFNLCIYHGNKGRAVRAGIVTALVKML 505
Query: 368 FTVGSNHLPMRLKEVSATILANVVNS 393
S+ R+ + + TIL+ + N+
Sbjct: 506 ----SDSTRHRMVDEALTILSVLANN 527
>sp|Q84TG3|PUB23_ARATH E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana GN=PUB23
PE=1 SV=1
Length = 411
Score = 80.1 bits (196), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 100/215 (46%), Gaps = 46/215 (21%)
Query: 17 GSYHFERLHIEPIYDAFVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCP 76
G E + I P F+CP++ ++M+DPV + G T++R++IEKW G+K CP
Sbjct: 3 GGIMDEEIEIPPF---FLCPISLEIMKDPVIVSTGITYDRDSIEKWLFA----GKKNSCP 55
Query: 77 LTQKELRSTDLNPSIALRNTIEEWNARNEAAQLDMARKSLNLGSSESDIMPALKYVQYFC 136
+T++++ DL P+ LR I+ W N + Y
Sbjct: 56 VTKQDITDADLTPNHTLRRLIQSWCTLNAS---------------------------YGV 88
Query: 137 QSSRSNKHVVHNSELIPMIIDMLKSSSRKVRCTALETLRIVVEEDDDNKEILGQGDTVRT 196
+ + + + SE+ +I D S +V+C L+ LR +V E+ NK L
Sbjct: 89 ERIPTPRPPICKSEIEKLIRDSASSHENQVKC--LKRLRQIVSENATNKRCLEAAG---- 142
Query: 197 IVKFLSHELSRERE------EAVSLLYELSKSEAL 225
+ +FL++ +S + E EA++LLY L SE +
Sbjct: 143 VPEFLANIVSNDSENGSLTDEALNLLYHLETSETV 177
>sp|Q9ZV31|PUB12_ARATH U-box domain-containing protein 12 OS=Arabidopsis thaliana GN=PUB12
PE=2 SV=1
Length = 654
Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 162/375 (43%), Gaps = 33/375 (8%)
Query: 33 FVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTDLNPSIA 92
F CP++ ++M DPV + +GQT+ERE I+KW + G CP TQ+ L S + P+
Sbjct: 260 FRCPISLELMTDPVIVSSGQTYERECIKKWLE-----GGHLTCPKTQETLTSDIMTPNYV 314
Query: 93 LRNTIEEWNARNEAAQLDMARKSLNLGSSESDIMPALKYVQYFCQSSRSNKHVVHNSELI 152
LR+ I +W N E P + SS S HN I
Sbjct: 315 LRSLIAQWCESN---------------GIEPPKRPNISQPSSKASSSSSAPDDEHNK--I 357
Query: 153 PMIIDMLKSSSRKVRCTALETLRIVVEEDDDNKEILGQGDTVRTIVKFLS-HELSREREE 211
++ L S + R +A +R++ ++++ N+ + + +V L+ SR +E
Sbjct: 358 EELLLKLTSQQPEDRRSAAGEIRLLAKQNNHNRVAIAASGAIPLLVNLLTISNDSRTQEH 417
Query: 212 AVSLLYELSKSEALCEKIGSINGAILILVGMTSSKSENLLTVEKAEKTLANLEKCENNVR 271
AV+ + LS + KI +GA+ +V + S + E A TL +L + N
Sbjct: 418 AVTSILNLSICQENKGKIVYSSGAVPGIVHVLQKGS--MEARENAAATLFSLSVIDENKV 475
Query: 272 QMAENGRLQPLLTQILEGPQETKLSLAAFLGDLALNSDVKVLVART-VGSCLINIMKSGN 330
+ G + PL+T + EG Q K A L +L + K R + L+ ++
Sbjct: 476 TIGAAGAIPPLVTLLSEGSQRGKKDAATALFNLCIFQGNKGKAVRAGLVPVLMRLLTEPE 535
Query: 331 MQAREAALKALNQISSCEPSAKVLIHAGILPPLVKDLFTVGSNHLPMRLKEVSATILANV 390
+ +L L +SS P K + A P++ D GS R KE SA +L ++
Sbjct: 536 SGMVDESLSILAILSS-HPDGKSEVGAADAVPVLVDFIRSGSP----RNKENSAAVLVHL 590
Query: 391 V--NSGHDFDSITVG 403
N H ++ +G
Sbjct: 591 CSWNQQHLIEAQKLG 605
>sp|Q9C9A6|PUB10_ARATH U-box domain-containing protein 10 OS=Arabidopsis thaliana GN=PUB10
PE=2 SV=1
Length = 628
Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 155/356 (43%), Gaps = 38/356 (10%)
Query: 15 SDGSYHFERLHIEPIYDAFVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPV 74
SD S + L I + F+CP++ ++M+DP + GQT+ER I++W +C
Sbjct: 232 SDDSQKSDNLTIP---EDFLCPISLELMKDPAIVSTGQTYERSFIQRWI-DCGNLS---- 283
Query: 75 CPLTQKELRSTDLNPSIALRNTIEEWNARNEAAQLDMARKSLNLGSSESDIMPALKYVQY 134
CP TQ++L + L P+ LR+ I +W ++ Q P
Sbjct: 284 CPKTQQKLENFTLTPNYVLRSLISQWCTKHNIEQ------------------PGGYMNGR 325
Query: 135 FCQSSRSNKHVVHNSELIPMIIDMLKSSSRKVRCTALETLRIVVEEDDDNKEILGQGDTV 194
S S + + + I ++ L S S + R TA+ +R + + DN+ ++ + +
Sbjct: 326 TKNSDGSFRDLSGDMSAIRALVCKLSSQSIEDRRTAVSEIRSLSKRSTDNRILIAEAGAI 385
Query: 195 RTIVKFLSHELSRE-REEAVSLLYELSKSEALCEKI---GSINGAILILVGMTSSKSENL 250
+VK L+ + E +E AV+ + LS E E I G++ +L+L + EN
Sbjct: 386 PVLVKLLTSDGDTETQENAVTCILNLSIYEHNKELIMLAGAVTSIVLVLRAGSMEAREN- 444
Query: 251 LTVEKAEKTLANLEKCENNVRQMAENGRLQPLLTQILEGPQETKLSLAAFLGDLALNSDV 310
A TL +L + N + +G + L+ + G K A L +L +
Sbjct: 445 -----AAATLFSLSLADENKIIIGASGAIMALVDLLQYGSVRGKKDAATALFNLCIYQGN 499
Query: 311 KVLVART--VGSCLINIMKSGNMQAREAALKALNQISSCEPSAKVLIHAGILPPLV 364
K R V + + S + + + AL L+ ++S + + ++ A +PPL+
Sbjct: 500 KGRAVRAGIVKPLVKMLTDSSSERMADEALTILSVLASNQVAKTAILRANAIPPLI 555
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 101/209 (48%), Gaps = 6/209 (2%)
Query: 181 DDDNKEILGQGDTVRTIVKFLSHELSREREEAVSLLYELSKSEALCEKIGSINGAILILV 240
D +++ G +R +V LS + +R AVS + LSK + + GAI +LV
Sbjct: 330 DGSFRDLSGDMSAIRALVCKLSSQSIEDRRTAVSEIRSLSKRSTDNRILIAEAGAIPVLV 389
Query: 241 GMTSSKSENLLTVEKAEKTLANLEKCENNVRQMAENGRLQPLLTQILEGPQETKLSLAAF 300
+ +S + T E A + NL E+N + G + ++ + G E + + AA
Sbjct: 390 KLLTSDGDTE-TQENAVTCILNLSIYEHNKELIMLAGAVTSIVLVLRAGSMEARENAAAT 448
Query: 301 LGDLALNSDVKVLV-ARTVGSCLINIMKSGNMQAREAALKALNQISSCEPSAKVLIHAGI 359
L L+L + K+++ A L+++++ G+++ ++ A AL + + + + AGI
Sbjct: 449 LFSLSLADENKIIIGASGAIMALVDLLQYGSVRGKKDAATALFNLCIYQGNKGRAVRAGI 508
Query: 360 LPPLVKDLFTVGSNHLPMRLKEVSATILA 388
+ PLVK L S R+ + + TIL+
Sbjct: 509 VKPLVKMLTDSSSE----RMADEALTILS 533
>sp|Q0IMG9|SL11_ORYSJ E3 ubiquitin-protein ligase SPL11 OS=Oryza sativa subsp. japonica
GN=SPL11 PE=1 SV=2
Length = 694
Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 163/370 (44%), Gaps = 36/370 (9%)
Query: 29 IYDAFVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTDLN 88
I D F CP++ ++M+DPV + GQT+ER IEKW CP TQ+++ ++ L
Sbjct: 273 IPDEFRCPISLELMKDPVIVSTGQTYERACIEKWIASGHH-----TCPTTQQKMSTSALT 327
Query: 89 PSIALRNTIEEWNARNEAAQLDMARKSLNLGSSESDIMPALKYVQYFCQSS-RSNKHVVH 147
P+ LR+ I +W N ++ ++S + + PA C SS R+N
Sbjct: 328 PNYVLRSLISQWCETN---GMEPPKRS----TQPNKPTPA-------CSSSERAN----- 368
Query: 148 NSELIPMIIDMLKSSSRKVRCTALETLRIVVEEDDDNKEILGQGDTVRTIVKFLSHELSR 207
I ++ L S + + +A LR++ + + +N+ + + + ++ LS R
Sbjct: 369 ----IDALLSKLCSPDTEEQRSAAAELRLLAKRNANNRICIAEAGAIPLLLSLLSSSDLR 424
Query: 208 EREEAVSLLYELSKSEALCEKIGSINGAILILVGMTSSKSENLLTVEKAEKTLANLEKCE 267
+E AV+ L LS E I S +GA+ +V + K+ ++ E A TL +L +
Sbjct: 425 TQEHAVTALLNLSIHEDNKASIIS-SGAVPSIVHVL--KNGSMEARENAAATLFSLSVID 481
Query: 268 NNVRQMAENGRLQPLLTQILEGPQETKLSLAAFLGDLALNSDVKVLVARTVGSCLINIMK 327
+ G + L+ + EG Q K AA L +L + K R LI +
Sbjct: 482 EYKVTIGGMGAIPALVVLLGEGSQRGKKDAAAALFNLCIYQGNKGRAIRAGLVPLIMGLV 541
Query: 328 SGNMQAREAALKALNQISSCEPSAKVLIHAGILPPLVKDLFTVGSNHLPMRLKEVSATIL 387
+ A A+ I S P K I A P++ ++ G+ R +E +A ++
Sbjct: 542 TNPTGALMDEAMAILSILSSHPEGKAAIGAAEPVPVLVEMIGSGTP----RNRENAAAVM 597
Query: 388 ANVVNSGHDF 397
++ + H
Sbjct: 598 LHLCSGEHHL 607
>sp|A2ZLU6|SL11_ORYSI Protein spotted leaf 11 OS=Oryza sativa subsp. indica GN=SPL11 PE=1
SV=2
Length = 694
Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 163/370 (44%), Gaps = 36/370 (9%)
Query: 29 IYDAFVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTDLN 88
I D F CP++ ++M+DPV + GQT+ER IEKW CP TQ+++ ++ L
Sbjct: 273 IPDEFRCPISLELMKDPVIVSTGQTYERACIEKWIASGHH-----TCPTTQQKMSTSALT 327
Query: 89 PSIALRNTIEEWNARNEAAQLDMARKSLNLGSSESDIMPALKYVQYFCQSS-RSNKHVVH 147
P+ LR+ I +W N ++ ++S + + PA C SS R+N
Sbjct: 328 PNYVLRSLISQWCETN---GMEPPKRS----TQPNKPTPA-------CSSSERAN----- 368
Query: 148 NSELIPMIIDMLKSSSRKVRCTALETLRIVVEEDDDNKEILGQGDTVRTIVKFLSHELSR 207
I ++ L S + + +A LR++ + + +N+ + + + ++ LS R
Sbjct: 369 ----IDALLSKLCSPDTEEQRSAAAELRLLAKRNANNRICIAEAGAIPLLLSLLSSSDLR 424
Query: 208 EREEAVSLLYELSKSEALCEKIGSINGAILILVGMTSSKSENLLTVEKAEKTLANLEKCE 267
+E AV+ L LS E I S +GA+ +V + K+ ++ E A TL +L +
Sbjct: 425 TQEHAVTALLNLSIHEDNKASIIS-SGAVPSIVHVL--KNGSMEARENAAATLFSLSVID 481
Query: 268 NNVRQMAENGRLQPLLTQILEGPQETKLSLAAFLGDLALNSDVKVLVARTVGSCLINIMK 327
+ G + L+ + EG Q K AA L +L + K R LI +
Sbjct: 482 EYKVTIGGMGAIPALVVLLGEGSQRGKKDAAAALFNLCIYQGNKGRAIRAGLVPLIMGLV 541
Query: 328 SGNMQAREAALKALNQISSCEPSAKVLIHAGILPPLVKDLFTVGSNHLPMRLKEVSATIL 387
+ A A+ I S P K I A P++ ++ G+ R +E +A ++
Sbjct: 542 TNPTGALMDEAMAILSILSSHPEGKAAIGAAEPVPVLVEMIGSGTP----RNRENAAAVM 597
Query: 388 ANVVNSGHDF 397
++ + H
Sbjct: 598 LHLCSGEHHL 607
>sp|Q9XIJ5|PUB18_ARATH U-box domain-containing protein 18 OS=Arabidopsis thaliana GN=PUB18
PE=2 SV=1
Length = 697
Score = 76.6 bits (187), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 99/386 (25%), Positives = 168/386 (43%), Gaps = 51/386 (13%)
Query: 33 FVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTDLNPSIA 92
+CP++ ++M DPV +E G T++R +I KWF CP+T K L ST+L +++
Sbjct: 292 LLCPISLEIMTDPVVIETGHTYDRSSITKWF-----GSGNITCPITGKILTSTELVDNVS 346
Query: 93 LRNTIEEWNARNEAAQLDMARKSLNLGSSESDIMP-------ALKYVQYFCQSSRSNKHV 145
+R I + N ++R+ S D++P A K + F
Sbjct: 347 VRQVIRKHCKTNGIVLAGISRRR----KSHDDVVPESLAAKGAGKLIAKFL--------- 393
Query: 146 VHNSELIPMIIDMLKSSSRKVRCTALETLRIVVEEDDDNKEILGQGDTVRTIVKFLSHEL 205
SELI +M+ + R++ R+ + N+ L + V ++K LS
Sbjct: 394 --TSELINGGEEMIYRAVREI--------RVQTKTSSFNRSCLVKAGAVTPLLKLLSSVD 443
Query: 206 SREREEAVSLLYELSKSEALCEKIGSINGAILILVGMTSSKSENLLTVEKAEKTLANLEK 265
R +E A++ + LSK KI IL+ + +K+E L A L L
Sbjct: 444 IRIQENAMAGILNLSKHVTGKSKIAGEGLKILVEILNEGAKTETRLYSASA---LFYLSS 500
Query: 266 CENNVRQMAENGRLQPLLTQILEGPQ----ETKLSLAAFLGDLALNSD--VKVLVARTVG 319
E+ R + EN P L I++G + +L A +G L + SD +VL A V
Sbjct: 501 VEDYSRLIGENPDAIPGLMNIVKGDDYGDSAKRSALLAVMG-LLMQSDNHWRVLAAGAV- 558
Query: 320 SCLINIMKSGNMQAREAA--LKALNQISSCEPSAKVLIHAGILPPLVKDLFTVGSNHLPM 377
L+++++SG + A L L +++ +I G L VK L + S P+
Sbjct: 559 PILLDLLRSGEISGGLTADCLATLAKLAEYPDGTIGVIRRGGLKLAVKILSS--SEDSPV 616
Query: 378 RLKEVSATILANV-VNSGHDFDSITV 402
+K+ ++ N+ +N G D + V
Sbjct: 617 AVKQHCVGLILNLCLNGGRDVVGVLV 642
>sp|O23225|PUB5_ARATH U-box domain-containing protein 5 OS=Arabidopsis thaliana GN=PUB5
PE=2 SV=3
Length = 718
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 54/91 (59%), Gaps = 5/91 (5%)
Query: 31 DAFVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTDLNPS 90
+ F C L++ VM DPV + +G TFER I+KWF E ++ CP+++++L L P+
Sbjct: 221 EKFKCTLSRTVMYDPVIISSGNTFERMQIQKWFDEGNDS-----CPISKRKLDDFTLKPN 275
Query: 91 IALRNTIEEWNARNEAAQLDMARKSLNLGSS 121
+ L++ I EW A+N D ARK + +S
Sbjct: 276 VELKSQISEWCAKNGLDVQDPARKHVKASNS 306
>sp|O80742|PUB19_ARATH U-box domain-containing protein 19 OS=Arabidopsis thaliana GN=PUB19
PE=2 SV=1
Length = 686
Score = 71.2 bits (173), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 111/239 (46%), Gaps = 29/239 (12%)
Query: 31 DAFVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTDLNPS 90
D CP++ ++M DPV LE+G T++R +I KWF CP T K L ST L +
Sbjct: 280 DDLRCPISLEIMSDPVVLESGHTYDRSSITKWFASG-----NITCPKTGKTLVSTVLVDN 334
Query: 91 IALRNTIEEWNARNEAAQLDMARKSLNLGSS----------------------ESDIMPA 128
+++ I+ ++ +N +K +++ S E +++ A
Sbjct: 335 FSVKQVIQSYSKQNGVVMGQKGKKKVDVAESLAAEEAGKLTAEFLAGELIKGDEEEMVKA 394
Query: 129 LKYVQYFCQSSRSNKHVVHNSELIPMIIDMLKSSSRKVRCTALETLRIVVEEDDDNKEIL 188
L ++ ++S + + + ++ ++ +L+S +++ A+ + + ++ I+
Sbjct: 395 LVEIRILTKTSTFYRSCLVEAGVVESLMKILRSDDPRIQENAMAGIMNLSKDIAGKTRIV 454
Query: 189 GQ-GDTVRTIVKFLSHELSRE-REEAVSLLYELSKSEALCEKIGSINGAILILVGMTSS 245
G+ G +R IV+ L+ RE R+ A + L+ LS IG I+ AI LV + S
Sbjct: 455 GEDGGGLRLIVEVLNDGARRESRQYAAAALFYLSSLGDYSRLIGEISDAIPGLVRIVKS 513
>sp|Q9C7R6|PUB17_ARATH U-box domain-containing protein 17 OS=Arabidopsis thaliana GN=PUB17
PE=2 SV=1
Length = 729
Score = 70.9 bits (172), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 119/260 (45%), Gaps = 38/260 (14%)
Query: 33 FVCPLTKQVMRDPVTLENGQTFEREAIEKWFKE--CRENGRKPVCPLTQKELRSTDLNPS 90
FVCP++ +M DPV + GQT++R +I +W +E C CP T + L + + P+
Sbjct: 309 FVCPISLDLMTDPVIISTGQTYDRNSIARWIEEGHC-------TCPKTGQMLMDSRIVPN 361
Query: 91 IALRNTIEEWNARNEAAQLDMARKSLNLGSSESDIMPALKYVQYFCQSSRSNKHVVHNSE 150
AL+N I +W + S ES+ + + F + + V N
Sbjct: 362 RALKNLIVQWCTASGI-------------SYESEFTDSPN--ESFASALPTKAAVEANKA 406
Query: 151 LIPMIIDMLKSSSRKVRCTALETLRIVVEEDDDNKEILGQGDTVRTIVKFLSHELSRERE 210
+ ++I L S+ + A +R++ + +N+ + + + + + L+ E + +E
Sbjct: 407 TVSILIKYLADGSQAAQTVAAREIRLLAKTGKENRAYIAEAGAIPHLCRLLTSENAIAQE 466
Query: 211 EAVSLL-----YELSKSEALCEKIGSINGAILILV-GMTSSKSEN-------LLTVEKAE 257
+V+ + YE +KS + E+ + + +LV G+T EN L V + +
Sbjct: 467 NSVTAMLNLSIYEKNKSRIM-EEGDCLESIVSVLVSGLTVEAQENAAATLFSLSAVHEYK 525
Query: 258 KTLANLEKCENNVRQMAENG 277
K +A +++C + + +NG
Sbjct: 526 KRIAIVDQCVEALALLLQNG 545
>sp|Q8VZ40|PUB14_ARATH U-box domain-containing protein 14 OS=Arabidopsis thaliana GN=PUB14
PE=1 SV=1
Length = 632
Score = 70.1 bits (170), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 172/381 (45%), Gaps = 47/381 (12%)
Query: 15 SDGSYHFERLHIEPIYDAFVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPV 74
S GS R I + F CP++ ++M+DPV + GQT+ER +I+KW + G K
Sbjct: 234 STGSRIVSRHRSPVIPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWL----DAGHK-T 288
Query: 75 CPLTQKELRSTDLNPSIALRNTIEEWNARN--EAAQLDMARKSLNLGSSESDIMPALKYV 132
CP +Q+ L L P+ L++ I W N E Q + ++ +G S
Sbjct: 289 CPKSQETLLHAGLTPNYVLKSLIALWCESNGIELPQNQGSCRTTKIGGS----------- 337
Query: 133 QYFCQSSRSNKHVVHNSELIPMIIDMLKSSSRKVRCTALETLRIVVEEDDDNKEILGQGD 192
SS ++ V + ++ + ++ + R A E LR++ + + DN+ + +
Sbjct: 338 ----SSSDCDRTFV-----LSLLEKLANGTTEQQRAAAGE-LRLLAKRNVDNRVCIAEAG 387
Query: 193 TVRTIVKFLSHELSREREEAVSLLYELSKSEALCEKIGSI--NGAILILVGMTSSKSENL 250
+ +V+ LS R +E +V+ L LS +E G+I GAI +V + K+ ++
Sbjct: 388 AIPLLVELLSSPDPRTQEHSVTALLNLSINEG---NKGAIVDAGAITDIVEVL--KNGSM 442
Query: 251 LTVEKAEKTLANLEKCENNVRQMAENGRLQPLLTQILEGPQETKLSLAAFLGDLALNSDV 310
E A TL +L + N + G +Q L++ + EG + K A + +L +
Sbjct: 443 EARENAAATLFSLSVIDENKVAIGAAGAIQALISLLEEGTRRGKKDAATAIFNLCIYQGN 502
Query: 311 KVLVARTVGSCLIN----IMKSGNMQAREAALKALNQISSCEPSAKVLIHAGILPPLVKD 366
K +R V +++ ++K + AL L +S+ + + A +P LV +
Sbjct: 503 K---SRAVKGGIVDPLTRLLKDAGGGMVDEALAILAILSTNQEGKTAIAEAESIPVLV-E 558
Query: 367 LFTVGSNHLPMRLKEVSATIL 387
+ GS R +E +A IL
Sbjct: 559 IIRTGSP----RNRENAAAIL 575
>sp|Q9C7G1|PUB45_ARATH U-box domain-containing protein 45 OS=Arabidopsis thaliana GN=PUB45
PE=1 SV=1
Length = 768
Score = 69.7 bits (169), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 88/205 (42%), Gaps = 32/205 (15%)
Query: 35 CPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTDLNPSIALR 94
CP++ Q+M DPV + +GQT+ER IEKWF + CP T ++L L P+ ++
Sbjct: 285 CPISLQLMYDPVIIASGQTYERICIEKWFSDGHN-----TCPKTHQQLSHLCLTPNYCVK 339
Query: 95 NTIEEWNARN-------EAAQLDMARKSLNLGSSESDIMPALKYV--------------- 132
I W +N LD+ L L SES + K V
Sbjct: 340 ALISSWCEQNGVQVPDGPPESLDLNYWRLALSVSESTDTRSAKRVGSCKLKDVKVVPLEE 399
Query: 133 -----QYFCQSSRSNKHVVHNSELIPMIIDMLKSSSRKVRCTALETLRIVVEEDDDNKEI 187
+ C+S V ++ + + + +C +E +R+++++D++ + +
Sbjct: 400 SGTIKEEACESEYQEDQVTLVERCTELLTTLTDVDTLRKKCRVVEQIRVLLKDDEEARIL 459
Query: 188 LGQGDTVRTIVKFLSHELSREREEA 212
+G+ V +++FL L+ A
Sbjct: 460 MGENGCVEALLQFLGSALNENNASA 484
>sp|Q6EUK7|PUB04_ORYSJ U-box domain-containing protein 4 OS=Oryza sativa subsp. japonica
GN=PUB4 PE=2 SV=1
Length = 728
Score = 69.7 bits (169), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 123/295 (41%), Gaps = 30/295 (10%)
Query: 33 FVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTDLNPSIA 92
F CP++ +MRDPV GQT++R +I +W +E CP + + L L P+ A
Sbjct: 301 FSCPISLDLMRDPVVASTGQTYDRPSIIQWIEEGHST-----CPNSGQTLADHRLVPNRA 355
Query: 93 LRNTIEEWNARNEAAQLDMARKSLNLGSSESDIMPALKYVQYFCQSSRSNKHVVHNSELI 152
LR+ I +W L S ES+ + S S + N
Sbjct: 356 LRSLISQW----------CGVYGLQYDSPESNE----GMAECVAASCSSRAAMEANKATA 401
Query: 153 PMIIDMLKSSSRKVRCTALETLRIVVEEDDDNKEILGQGDTVRTIVKFLSHELSREREEA 212
+++ ML+ S V+ A + +R++ + N+ + + + + L +E A
Sbjct: 402 RILVRMLEDGSENVKAVAAKEIRLLAKTGKQNRAFIADLGAIPLLCRLLLSNDWMAQENA 461
Query: 213 VSLLYELSKSEALCEKIGSINGAILILVGMTSSKSENLLTVEKAEKTLANLEKCE--NNV 270
V+ L LS E +I G + ++VG+ +N T E E A L +N
Sbjct: 462 VTALLNLSIFEPNKGRIMEQEGCLRLIVGVL----QNGWTTEAKENAAATLFSLSVVHNF 517
Query: 271 RQ--MAENGRLQPLLTQILEGPQETKLSLAAFLGDLALNSDVKVLVARTVGSCLI 323
++ M E G ++ L + + +G K L +L+ + + AR + SC +
Sbjct: 518 KKLIMNEPGAVEELASMLTKGTSRGKKDAVMALFNLSTHPESS---ARMLESCAV 569
>sp|Q9SVC6|PUB22_ARATH E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis thaliana GN=PUB22
PE=1 SV=1
Length = 435
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 80/173 (46%), Gaps = 33/173 (19%)
Query: 33 FVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTDLNPSIA 92
F+CP++ +M+DPV + G T++RE+IEKW +G+K CP+T++ + TDL P+
Sbjct: 11 FLCPISLDIMKDPVIVSTGITYDRESIEKWLF----SGKKNSCPVTKQVITETDLTPNHT 66
Query: 93 LRNTIEEWNARNEAAQLDMARKSLNLGSSESDIMPALKYVQYFCQSSRSNKHVVHNSELI 152
LR I+ W N + Y + + K + SE+
Sbjct: 67 LRRLIQSWCTLNAS---------------------------YGIERIPTPKPPICKSEIE 99
Query: 153 PMIIDMLKSSSRKVRCTALETLRIVVEEDDDNKEILGQGDTVRTIVKFLSHEL 205
+I + S +V+C L+ LR +V E+ NK L + + +S+ +
Sbjct: 100 KLIKESSSSHLNQVKC--LKRLRQIVSENTTNKRCLEAAEVPEFLANIVSNSV 150
>sp|O48700|PUB6_ARATH U-box domain-containing protein 6 OS=Arabidopsis thaliana GN=PUB6
PE=2 SV=2
Length = 771
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 90/398 (22%), Positives = 155/398 (38%), Gaps = 94/398 (23%)
Query: 35 CPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTDLNPSIALR 94
CP++ Q+M DPV + +GQT+ER IEKWF + + CP TQ++L L P+ ++
Sbjct: 281 CPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNS-----CPKTQQQLPHLSLTPNYCVK 335
Query: 95 NTIEEWNARN-------EAAQLDMARKSLNLGSSESDIMPALKYVQY--FC--------- 136
I W +N LD+ L + SES P K V C
Sbjct: 336 GLIASWCEQNGITVPTGPPESLDLNYWRLAMSDSES---PNSKSVDSVGLCTPKDIRVVP 392
Query: 137 -------QSSRSNK-------------HVVHNSELIPMIIDMLKSSSRKVRCTALETLRI 176
+S R K +V+ + I I+D + ++K C +E +RI
Sbjct: 393 LEESSTIESERQQKEKNNAPDEVDSEINVLEGYQDILAIVDKEEDLAKK--CKVVENVRI 450
Query: 177 VVEEDDDNKEILGQGDTVRTIVKFLSHELSREREEAVSLLYELSKSEALCEKIGSINGAI 236
+++++++ + ++G V ++FL E AV
Sbjct: 451 LLKDNEEARILMGANGFVEAFLQFL--------ESAV----------------------- 479
Query: 237 LILVGMTSSKSENLLTVEKAEKTLANLEKCENNVRQMAENGRLQPLLTQILEGPQETKLS 296
N E L NL N +++ + PLL +++ Q +
Sbjct: 480 ---------HDNNAAAQETGAMALFNLAVNNNRNKELMLTSGVIPLLEKMISCSQSQGPA 530
Query: 297 LAAFLGDLALNSDVKVLVARTVGSCLIN-IMKSGNMQAREAALKALNQISSCEPSAKVLI 355
A +L L V+ + S +N +++ Q + AL AL +S+ P+ L+
Sbjct: 531 TALYLNLSCLEKAKPVIGSSQAVSFFVNLLLQDTKTQCKLDALHALYNLSTYSPNIPTLL 590
Query: 356 HAGILPPLVKDLFTVGSNHLPMRLKEVSATILANVVNS 393
+ I+ L + NHL + E S +L N+ +S
Sbjct: 591 SSNIIKSL--QVLASTGNHLWI---EKSLAVLLNLASS 623
>sp|Q9LZW3|PUB16_ARATH U-box domain-containing protein 16 OS=Arabidopsis thaliana GN=PUB16
PE=2 SV=1
Length = 674
Score = 67.4 bits (163), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 115/268 (42%), Gaps = 40/268 (14%)
Query: 33 FVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTDLNPSIA 92
F CP+T ++MRDPV + GQT++RE+I+ W + CP T + L+ T L P+ A
Sbjct: 278 FRCPITLELMRDPVVVATGQTYDRESIDLWIQSGHNT-----CPKTGQVLKHTSLVPNRA 332
Query: 93 LRNTIEEWNARNEAAQLDMARKSLNLGSSESDIMPALKYVQYFCQSSRSNKHVVHNSELI 152
L+N I W R++ ++ G + P + V++ ++
Sbjct: 333 LKNLIVLW-CRDQKIPFEL------YGDGGGEPAPCKEAVEF-------------TKMMV 372
Query: 153 PMIIDMLKSSSRKVRCTALETLRIVVEEDDDNKEILGQGDTVRTIVKFLSHELSREREEA 212
+I+ L + + LR + + D + + + + +V++L+ E + A
Sbjct: 373 SFLIEKLSVADSN---GVVFELRALAKSDTVARACIAEAGAIPKLVRYLATECPSLQINA 429
Query: 213 VSLLYELSKSEA----LCEKIGSINGAILIL-VGMTSSKSENLLTVEKAEKTLANLEKCE 267
V+ + LS E + E G++NG I +L G T N A TL +L
Sbjct: 430 VTTILNLSILEQNKTRIMETDGALNGVIEVLRSGATWEAKAN------AAATLFSLAGVS 483
Query: 268 NNVRQMAENGRLQPLLTQIL-EGPQETK 294
R++ R+ L + +GP +K
Sbjct: 484 AYRRRLGRKARVVSGLVDLAKQGPTSSK 511
>sp|Q9SF15|PUB24_ARATH E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis thaliana GN=PUB24
PE=1 SV=1
Length = 456
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 89/175 (50%), Gaps = 20/175 (11%)
Query: 29 IYDAFVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELR-STDL 87
I + F+CP++ ++M+DPVT +G T++R+ I KW ++ P CP+T++ L +DL
Sbjct: 10 IPNYFICPISLEIMKDPVTTVSGITYDRQNIVKWLEKV------PSCPVTKQPLPLDSDL 63
Query: 88 NPSIALRNTIEEWNARNEAAQLDMARKSLNLGSSESDIMPALKYVQYFCQSSRSNKHVVH 147
P+ LR I+ W NE + + + + + +++ +K ++ F Q + + +
Sbjct: 64 TPNHMLRRLIQHWCVENETRGV-VRISTPRVPPGKLNVVEEIKNLKKFGQEALGREETLQ 122
Query: 148 NSELIPMIIDMLKSSSRKVRCTA-------LETLRIVVEEDDDNKEILGQGDTVR 195
E++ M ++R++ C L ++ E++D + I G +++R
Sbjct: 123 KLEVLAM-----DGNNRRLMCECGVHKSLILFVVKCTSEDEDGRRRIKGLDESLR 172
>sp|Q5XEZ8|PUB2_ARATH U-box domain-containing protein 2 OS=Arabidopsis thaliana GN=PUB2
PE=2 SV=1
Length = 707
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 102/444 (22%), Positives = 173/444 (38%), Gaps = 124/444 (27%)
Query: 33 FVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTDLNPSIA 92
F C L+ ++M DPV + +GQTFER I+KW + VCP T++ L T L P+
Sbjct: 244 FRCSLSLELMTDPVIVASGQTFERVFIQKWI-----DMGLMVCPKTRQALSHTTLTPNFI 298
Query: 93 LRNTIEEWNARNEAAQLD------------MARKSLNLGSSE---SDIMPALKYVQYF-- 135
+R + W N D + +S+ SSE S+ + A + Q F
Sbjct: 299 VRAFLASWCETNNVYPPDPLELIHSSEPFPLLVESVRASSSENGHSESLDAEELRQVFSR 358
Query: 136 ------------CQSSRSN--------------------KHVVHNSELIPM--------- 154
C++ R+N +H H +IP
Sbjct: 359 SASAPGIVSEVVCKTKRNNNAAADRSLTRSNTPWKFPEERHWRHPG-IIPATVRETGSSS 417
Query: 155 --------IIDMLKSSSRKVRCTALETLRIVVEEDDDNKEILGQGDTVRTIVKFLSHELS 206
+ID LKSSS + A +RI+ DN+ ++ + + + ++V L
Sbjct: 418 SIETEVKKLIDDLKSSSLDTQREATARIRILARNSTDNRIVIARCEAIPSLVSLLYSTDE 477
Query: 207 REREEAVSLLYELS---KSEALCEKIGSINGAILIL-VGMTSSKSENLLTVEKAEKTLAN 262
R + +AV+ L LS +++L + G+I I +L G N + TL +
Sbjct: 478 RIQADAVTCLLNLSINDNNKSLIAESGAIVPLIHVLKTGYLEEAKAN------SAATLFS 531
Query: 263 LEKCENNVRQMAENGRLQPLLTQI----LEGPQETKLSL--------------------- 297
L E ++ E G ++PL+ + L G ++ +L
Sbjct: 532 LSVIEEYKTEIGEAGAIEPLVDLLGSGSLSGKKDAATALFNLSIHHENKTKVIEAGAVRY 591
Query: 298 ------AAF---------LGDLALNSDVKVLVARTVG-SCLINIMKSGNMQAREAALKAL 341
AF L +LA + K+ + G L+ +++ G+ + +E A AL
Sbjct: 592 LVELMDPAFGMVEKAVVVLANLATVREGKIAIGEEGGIPVLVEVVELGSARGKENATAAL 651
Query: 342 NQISSCEPS-AKVLIHAGILPPLV 364
Q+ + P +I G++PPLV
Sbjct: 652 LQLCTHSPKFCNNVIREGVIPPLV 675
Score = 33.5 bits (75), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 102/252 (40%), Gaps = 45/252 (17%)
Query: 128 ALKYVQYFCQSSRSNKHVVHNSELIPMIIDMLKSSSRKVRCTALETLRIVVEEDDDNKEI 187
A ++ ++S N+ V+ E IP ++ +L S+ +++ A+ L + + +D+NK +
Sbjct: 441 ATARIRILARNSTDNRIVIARCEAIPSLVSLLYSTDERIQADAVTCL-LNLSINDNNKSL 499
Query: 188 LGQGDTVRTIVKFL-SHELSREREEAVSLLYELSKSEALCEKIGSINGAILILVGMTSSK 246
+ + + ++ L + L + + + L+ LS E +IG GAI LV + S
Sbjct: 500 IAESGAIVPLIHVLKTGYLEEAKANSAATLFSLSVIEEYKTEIGEA-GAIEPLVDLLGSG 558
Query: 247 S------------------EN--------------------LLTVEKAEKTLANLEKCEN 268
S EN VEKA LANL
Sbjct: 559 SLSGKKDAATALFNLSIHHENKTKVIEAGAVRYLVELMDPAFGMVEKAVVVLANLATVRE 618
Query: 269 NVRQMAENGRLQPLLTQILE-GPQETKLSLAAFLGDLALNSD--VKVLVARTVGSCLINI 325
+ E G + P+L +++E G K + A L L +S ++ V L+ +
Sbjct: 619 GKIAIGEEGGI-PVLVEVVELGSARGKENATAALLQLCTHSPKFCNNVIREGVIPPLVAL 677
Query: 326 MKSGNMQAREAA 337
KSG + +E A
Sbjct: 678 TKSGTARGKEKA 689
>sp|D1FP53|LIN_MEDTR Putative E3 ubiquitin-protein ligase LIN OS=Medicago truncatula
GN=LIN PE=2 SV=1
Length = 1488
Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 61/116 (52%), Gaps = 10/116 (8%)
Query: 10 DSGSQSDGSY-HFERLHI--EPIYDAFVCPLTKQVMRDPVTLENGQTFEREAIEKWFKEC 66
+ G QS S+ E+L I +P D FVCP+T Q+ DPVTLE GQT+ER+AI++W
Sbjct: 492 EDGYQSSSSFPKLEKLTIGSKPPKD-FVCPITGQIFSDPVTLETGQTYERKAIQEWL--- 547
Query: 67 RENGRKPVCPLTQKELRSTDL-NPSIALRNTIEEWNARNEAAQLDMARKSLNLGSS 121
CP+T++ L + L + L+ I W +N + + + GSS
Sbjct: 548 --GTGNTTCPITRQALSANILPKTNYVLKRLIVSWKEQNPELAQEFSNSNTPRGSS 601
>sp|A0AUS0|WSDU1_DANRE WD repeat, SAM and U-box domain-containing protein 1 OS=Danio rerio
GN=wdsub1 PE=2 SV=1
Length = 487
Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 9/84 (10%)
Query: 22 ERLHIEPIY----DAFVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPL 77
E L + P+Y D F+CP+T+++M+DPV +G ++EREAIE W + P+
Sbjct: 406 EELKMVPVYNGTPDEFLCPITREIMKDPVIAADGYSYEREAIEAWIST-----KNRTSPM 460
Query: 78 TQKELRSTDLNPSIALRNTIEEWN 101
T L++T L P+ L+ I W+
Sbjct: 461 TNLPLQTTLLTPNRTLKMAIFRWS 484
>sp|C6L7U1|LIN1_LOTJA Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus japonicus
GN=CERBERUS PE=2 SV=2
Length = 1485
Score = 63.5 bits (153), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 59/104 (56%), Gaps = 11/104 (10%)
Query: 10 DSGSQSDGSY-HFERLHI--EPIYDAFVCPLTKQVMRDPVTLENGQTFEREAIEKWFKEC 66
D G QS S E+L + +P D FVCP+T Q+ DPVTLE GQT+ER+AI++W +
Sbjct: 490 DDGYQSFNSLPKLEKLSMGSKPPKD-FVCPITGQIFCDPVTLETGQTYERKAIQEWLR-- 546
Query: 67 RENGRKPVCPLTQKELRSTDL-NPSIALRNTIEEWNARN-EAAQ 108
CP+T++ L ++ L + L+ I W +N E AQ
Sbjct: 547 ---TGNTTCPITRQPLSASILPKTNYVLKRLITSWKEQNPELAQ 587
>sp|Q9SRT0|PUB9_ARATH U-box domain-containing protein 9 OS=Arabidopsis thaliana GN=PUB9
PE=1 SV=1
Length = 460
Score = 63.5 bits (153), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 5/87 (5%)
Query: 18 SYHFERLHIEPIYDAFVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPL 77
S E L + F CPL+ ++MRDPV L +GQT+++ I+KW +G + CP
Sbjct: 63 SSSLEMLETVSCPEEFRCPLSNELMRDPVVLASGQTYDKLFIQKWL----SSGNR-TCPK 117
Query: 78 TQKELRSTDLNPSIALRNTIEEWNARN 104
TQ+ L T L P++ +R I +W +N
Sbjct: 118 TQQVLPHTALTPNLLIREMISKWCKKN 144
>sp|Q9CAG5|PUB7_ARATH U-box domain-containing protein 7 OS=Arabidopsis thaliana GN=PUB7
PE=2 SV=1
Length = 782
Score = 63.5 bits (153), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 130/308 (42%), Gaps = 54/308 (17%)
Query: 35 CPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTDLNPSIALR 94
CP++ Q+M DPV + +GQT+ER IEKWF + CP TQ++L L P+ ++
Sbjct: 278 CPISLQLMCDPVIIASGQTYERVCIEKWFSDGHN-----TCPKTQQQLPHISLTPNNCVK 332
Query: 95 NTIEEWNARN---------EAAQLDMARKSLNLGSSES-----------------DIMPA 128
I W +N E+ LD R L L SES I+P
Sbjct: 333 GLIASWCEQNGTQIPSGPPESQDLDYWR--LALSDSESTKSQSVNSIGSYKLKGVKIVPL 390
Query: 129 LKYVQYFCQSSRSNKHVVHNS--------ELIPMIIDML----KSSSRKVRCTALETLRI 176
+ + + + V + ++ D+L + + +C +E +R+
Sbjct: 391 EENGTTVVERQNTEESFVSDDDDEEDSDINVLERYQDLLAVLNEEEGLEKKCKVVEKIRL 450
Query: 177 VVEEDDDNKEILGQGDTVRTIVKFLSHEL----SREREEAVSLLYELSKSEALCEKIGSI 232
++++D++ + +G V +++FL + + ++ L+ L+ + +++
Sbjct: 451 LLKDDEEARIFMGANGFVEALLRFLGSAVDDNNAAAQDSGAMALFNLAVNNNRNKELMLT 510
Query: 233 NGAILILVGMTSSKSENLLTVEKAEKTLANLEKCENNVRQMAENGRLQPLLTQILEGPQE 292
+G I +L M SS + A NL C + + + + + P L Q+L+ E
Sbjct: 511 SGVIRLLEKMISSAESH----GSATALYLNL-SCLDEAKSVIGSSQAVPFLVQLLQKEIE 565
Query: 293 TKLSLAAF 300
T+ L A
Sbjct: 566 TQCKLDAL 573
>sp|Q058P4|PUB30_ARATH U-box domain-containing protein 30 OS=Arabidopsis thaliana GN=PUB30
PE=2 SV=1
Length = 448
Score = 63.2 bits (152), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 8/110 (7%)
Query: 21 FERLHIEPIYDAFVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQK 80
+ L ++ I F+CP++ + M+DPVTL GQT+ER I KWF N CP T +
Sbjct: 56 IKELDLQDIPSVFICPISLEPMQDPVTLCTGQTYERLNIHKWF-----NLGHLTCPTTMQ 110
Query: 81 ELRSTDLNPSIALRNTIEEWNARNEAAQLDMARKSLNLGSSESDIMPALK 130
EL + P+ L + I W ++ M ++S ++ +I+ LK
Sbjct: 111 ELWDDTVTPNKTLHHLIYTWFSQKYVL---MKKRSEDVQGRAIEILGTLK 157
>sp|D1FP57|LIN2_LOTJA Putative E3 ubiquitin-protein ligase LIN-2 OS=Lotus japonicus
GN=LIN PE=1 SV=1
Length = 1485
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 59/104 (56%), Gaps = 11/104 (10%)
Query: 10 DSGSQSDGSY-HFERLHI--EPIYDAFVCPLTKQVMRDPVTLENGQTFEREAIEKWFKEC 66
+ G QS S E+L + +P D FVCP+T Q+ DPVTLE GQT+ER+AI++W +
Sbjct: 490 EDGYQSSSSLPKLEKLSMGSKPPKD-FVCPITGQIFCDPVTLETGQTYERKAIQEWLR-- 546
Query: 67 RENGRKPVCPLTQKELRSTDL-NPSIALRNTIEEWNARN-EAAQ 108
CP+T++ L ++ L + L+ I W +N E AQ
Sbjct: 547 ---TGNTTCPITRQPLSASILPKTNYVLKRLITSWKEQNPELAQ 587
>sp|Q8GZ84|PUB36_ARATH U-box domain-containing protein 36 OS=Arabidopsis thaliana GN=PUB36
PE=2 SV=2
Length = 435
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 6/76 (7%)
Query: 25 HIEPIYDAFVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRS 84
H EP F+CP+T +M DP +G T+E EAI +WF+ E P+ K L
Sbjct: 350 HREPP-QYFICPITHDIMEDPHVAADGFTYEGEAISRWFERGHETS-----PMINKRLPH 403
Query: 85 TDLNPSIALRNTIEEW 100
T L P++ALR+ I+EW
Sbjct: 404 TSLVPNLALRSAIQEW 419
>sp|Q9FHN9|PUB31_ARATH U-box domain-containing protein 31 OS=Arabidopsis thaliana GN=PUB31
PE=2 SV=1
Length = 444
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 49/107 (45%), Gaps = 10/107 (9%)
Query: 3 GSWDGGY-----DSGSQSDGSYHFERLHIEPIYDAFVCPLTKQVMRDPVTLENGQTFERE 57
G DG + D + D L + I F+CP++ + M+DPVTL GQT+ER
Sbjct: 29 GGGDGKFLVVVTDEKKKLDLKEMISELELPEIPSVFICPISLEPMQDPVTLCTGQTYERS 88
Query: 58 AIEKWFKECRENGRKPVCPLTQKELRSTDLNPSIALRNTIEEWNARN 104
I KWF N CP T +EL + P+ L I W ++
Sbjct: 89 NILKWF-----NIGHCTCPTTMQELWDDLVTPNKTLHQLIYTWFSQK 130
>sp|Q9LT79|PUB25_ARATH U-box domain-containing protein 25 OS=Arabidopsis thaliana GN=PUB25
PE=2 SV=1
Length = 421
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 85/196 (43%), Gaps = 35/196 (17%)
Query: 33 FVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTDLNPSIA 92
F CP++ ++M+DPVT+ GQT++R +IE W G CP+T+ L L P+
Sbjct: 18 FRCPISLELMQDPVTVCTGQTYDRASIESWVS----IGNNTTCPVTRAPLSDFTLIPNHT 73
Query: 93 LRNTIEEW---NARNEAAQLDMARKSLNLGSSESDIMPALKYVQYFCQSSRSNKHVVHNS 149
LR I+EW N N ++ ++ + S + + A S+ + HV
Sbjct: 74 LRRLIQEWCVANRSNGVERIPTPKQPADPTSVRALLSQA---------SAITGTHV---- 120
Query: 150 ELIPMIIDMLKSSSRKVRCTALETLRIVVEEDDDNKEILGQGDTVRTIVKFLSHELSRER 209
S + R AL LR + D N+ ++ + ++K L E +
Sbjct: 121 -------------SVRSRAAALRRLRGFARDSDKNRVLIAAHNATEILIKILFSETTSSE 167
Query: 210 --EEAVSLLYELSKSE 223
E+++LL L +E
Sbjct: 168 LVSESLALLVMLPITE 183
>sp|Q9D0I6|WSDU1_MOUSE WD repeat, SAM and U-box domain-containing protein 1 OS=Mus
musculus GN=Wdsub1 PE=2 SV=1
Length = 474
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 29 IYDAFVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTDLN 88
I D F+CP+T+++M+DPV +G ++EREA+E W + +K P+T L S L
Sbjct: 402 IPDEFICPITRELMKDPVIASDGYSYEREAMESWIHK-----KKRTSPMTNLALPSLVLT 456
Query: 89 PSIALRNTIEEWNARNE 105
P+ L+ I W +E
Sbjct: 457 PNRTLKMAINRWLETHE 473
>sp|Q5FVN8|WSDU1_RAT WD repeat, SAM and U-box domain-containing protein 1 OS=Rattus
norvegicus GN=Wdsub1 PE=2 SV=1
Length = 476
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Query: 29 IYDAFVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTDLN 88
I D F+CP+T+++M+DPV +G ++EREA+E W + +K P+T L S L
Sbjct: 404 IPDEFICPITRELMKDPVIASDGYSYEREAMESWIHK-----KKRTSPMTNLALPSLVLT 458
Query: 89 PSIALRNTIEEW 100
P+ L+ I W
Sbjct: 459 PNRTLKMAINRW 470
>sp|O81902|PUB8_ARATH U-box domain-containing protein 8 OS=Arabidopsis thaliana GN=PUB8
PE=2 SV=1
Length = 374
Score = 60.5 bits (145), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 150/336 (44%), Gaps = 37/336 (11%)
Query: 33 FVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTD-LNPSI 91
F CP++ ++M DPV L++G TF+R +I++W ++G + CP+T+ L T L P+
Sbjct: 9 FRCPISLEIMSDPVILQSGHTFDRVSIQQWI----DSGNR-TCPITKLPLSETPYLIPNH 63
Query: 92 ALRNTIEEW-------NARNEAAQLDMARKSLNL-------GSSESDIMPALKYVQYFCQ 137
ALR+ I + ++R Q +S L SS + + +L + +
Sbjct: 64 ALRSLILNFAHVSLKESSRPRTQQEHSHSQSQALISTLVSQSSSNASKLESLTRLVRLTK 123
Query: 138 SSRSNKHVVHNSELIPMIIDMLKSSSRKVRCTALETLRIVVEEDDDNKEILGQGDTVRTI 197
S + V S + +D + S ++ ++ +L L + EDD+ ++ G +R I
Sbjct: 124 RDSSIRRKVTESGAVRAALDCVDSCNQVLQEKSLSLLLNLSLEDDNKVGLVADG-VIRRI 182
Query: 198 VKFLSHELSREREEAVSLLYELSKSEALCEKIGSINGAILILVGMTSSKSENLLTVEKAE 257
V L + A +LL L+ E IGS AI LV + ++ E+ E
Sbjct: 183 VTVLRVGSPDCKAIAATLLTSLAVVEVNKATIGSYPDAISALVSLLRVGNDR----ERKE 238
Query: 258 KTLANLEKCE--NNVRQMAENGRLQPLLTQILEGPQETKLSLAAFL----GDLALNSDVK 311
A C +N +++ + G + P+L + + E + + L G S V
Sbjct: 239 SATALYALCSFPDNRKRVVDCGSV-PILVEAADSGLERAVEVLGLLVKCRGGREEMSKVS 297
Query: 312 VLVARTVGSCLINIMKSGNMQAREAALKALNQISSC 347
V L+N++++GN++ + +L LN + C
Sbjct: 298 GFV-----EVLVNVLRNGNLKGIQYSLFILNCLCCC 328
>sp|Q683D5|PUB37_ARATH U-box domain-containing protein 37 OS=Arabidopsis thaliana GN=PUB37
PE=2 SV=1
Length = 400
Score = 60.5 bits (145), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 7/73 (9%)
Query: 28 PIYDAFVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTDL 87
P Y F+CP++ +VM+DP +G T+E EAI W + G P+T +L T L
Sbjct: 326 PQY--FICPISLEVMKDPQLAADGFTYEAEAISTWLQ-----GGHETSPMTNTKLHHTKL 378
Query: 88 NPSIALRNTIEEW 100
P++ALR+ I+EW
Sbjct: 379 VPNLALRSAIQEW 391
>sp|Q9LSA6|PUB29_ARATH U-box domain-containing protein 29 OS=Arabidopsis thaliana GN=PUB29
PE=1 SV=1
Length = 415
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 72/148 (48%), Gaps = 19/148 (12%)
Query: 33 FVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTDLNPSIA 92
F CP++ VMR PV+L G T++R +I++W +G CP T + L++ D P++
Sbjct: 16 FKCPISLDVMRSPVSLCTGVTYDRASIQRWL-----DGGNNTCPATMQLLKTKDFVPNLT 70
Query: 93 LRNTIEEWN------------ARNEAAQLDM-ARKSLNLGSSESDIMPALKYVQYFCQSS 139
L+ I W+ N + ++ ++ +N+ + L + F + S
Sbjct: 71 LQRLINIWSDSIGRRHNGDSPVLNPPSGREVPTKEEVNVLLERLMSLENLMKIVRFVKDS 130
Query: 140 RSNKHVVHNS-ELIPMIIDMLKSSSRKV 166
SN+ + E +PM++D++++ K+
Sbjct: 131 DSNREFLSKKMEFVPMLVDIIRTKKTKI 158
>sp|P0C6E7|PUB55_ARATH Putative U-box domain-containing protein 55 OS=Arabidopsis thaliana
GN=PUB55 PE=3 SV=1
Length = 568
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 48/77 (62%), Gaps = 7/77 (9%)
Query: 28 PIYDAFVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTDL 87
P Y F+CP++++VMR+P +G T+E E++ +W +NG + P+T +L +L
Sbjct: 498 PSY--FICPISQEVMREPRVAADGFTYEAESLREWL----DNGHE-TSPMTNLKLAHNNL 550
Query: 88 NPSIALRNTIEEWNARN 104
P+ ALR+ I+EW RN
Sbjct: 551 VPNHALRSAIQEWLQRN 567
>sp|Q9C8D1|PUB20_ARATH U-box domain-containing protein 20 OS=Arabidopsis thaliana GN=PUB20
PE=2 SV=1
Length = 431
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 44/72 (61%), Gaps = 5/72 (6%)
Query: 29 IYDAFVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTDLN 88
I F CP++ ++M+DPV + +G T++RE IEKWF E+G + CP+T L S +
Sbjct: 33 IPSQFQCPISYELMKDPVIIASGITYDRENIEKWF----ESGYQ-TCPVTNTVLTSLEQI 87
Query: 89 PSIALRNTIEEW 100
P+ +R I+ W
Sbjct: 88 PNHTIRRMIQGW 99
>sp|Q8GWV5|PUB3_ARATH U-box domain-containing protein 3 OS=Arabidopsis thaliana GN=PUB3
PE=2 SV=2
Length = 760
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 52/88 (59%), Gaps = 10/88 (11%)
Query: 28 PIYDAFVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTDL 87
P Y F CPL+ ++M DPV + +GQTF+R +I+KW +NG VCP T++ L +L
Sbjct: 239 PPY--FRCPLSTELMLDPVIVASGQTFDRTSIKKWL----DNGL-AVCPRTRQVLTHQEL 291
Query: 88 NPSIALRNTIEEWNARNEAAQLDMARKS 115
P+ ++ I W EA ++++A S
Sbjct: 292 IPNYTVKAMIASW---LEANRINLATNS 316
Score = 38.1 bits (87), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 110/237 (46%), Gaps = 15/237 (6%)
Query: 155 IIDMLKSSSRKVRCTALETLRIVVEEDDDNKEILGQGDTVRTIVKFLSHELSREREEAVS 214
+++ LKS S KV+ A +R + +N+ +G+ + ++ L E +E AV+
Sbjct: 477 LVEDLKSGSNKVKTAAAAEIRHLTINSIENRVHIGRCGAITPLLSLLYSEEKLTQEHAVT 536
Query: 215 LLYELSKSE---ALCEKIGSINGAILILVGMTSSKSENLLTVEKAEKTLANLEKCENNVR 271
L LS SE A+ ++G+I + +L EN + +L +L + N
Sbjct: 537 ALLNLSISELNKAMIVEVGAIEPLVHVLNTGNDRAKEN------SAASLFSLSVLQVNRE 590
Query: 272 QMAE-NGRLQPLLTQILEGPQETKLSLAAFLGDLALNSDVKVLVARTVGSCLINIMKSGN 330
++ + N +Q L+ + +G K A+ L +L++ D K + + + + +
Sbjct: 591 RIGQSNAAIQALVNLLGKGTFRGKKDAASALFNLSITHDNKARIVQAKAVKYLVELLDPD 650
Query: 331 MQAREAALKALNQISSCEPSAKVLIHAGILPPLVKDLFTVGSNHLPMRLKEVSATIL 387
++ + A+ L +S+ + ++ G +P LV+ + +GS R KE +A++L
Sbjct: 651 LEMVDKAVALLANLSAVGEGRQAIVREGGIPLLVETV-DLGS----QRGKENAASVL 702
>sp|Q8N9V3|WSDU1_HUMAN WD repeat, SAM and U-box domain-containing protein 1 OS=Homo
sapiens GN=WDSUB1 PE=1 SV=3
Length = 476
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Query: 29 IYDAFVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTDLN 88
I D F+CP+T+++M+DPV +G ++E+EA+E W + +K P+T L S L
Sbjct: 404 IPDEFICPITRELMKDPVIASDGYSYEKEAMENWISK-----KKRTSPMTNLVLPSAVLT 458
Query: 89 PSIALRNTIEEW 100
P+ L+ I W
Sbjct: 459 PNRTLKMAINRW 470
>sp|Q9LU47|PUB53_ARATH Putative U-box domain-containing protein 53 OS=Arabidopsis thaliana
GN=PUB53 PE=3 SV=1
Length = 819
Score = 57.4 bits (137), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 33 FVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTDLNPSIA 92
F CPL K VM++P +G T++R AIE+W EN R P+T L++ +L P+
Sbjct: 753 FFCPLLKDVMKEPCIAADGYTYDRRAIEEWM----ENHR--TSPVTNSPLQNVNLLPNHT 806
Query: 93 LRNTIEEWNARNE 105
L I EW RN+
Sbjct: 807 LYAAIVEWRNRNQ 819
>sp|Q9SW11|PUB35_ARATH U-box domain-containing protein 35 OS=Arabidopsis thaliana GN=PUB35
PE=1 SV=2
Length = 835
Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Query: 33 FVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTDLNPSIA 92
F+CPL K VM +P +G T++R AIE+W KE P+T L S +L P+
Sbjct: 770 FICPLLKDVMNEPCVAADGYTYDRHAIEEWLKEHN------TSPMTDSPLHSKNLLPNYT 823
Query: 93 LRNTIEEWNA 102
L I EW +
Sbjct: 824 LYTAIMEWRS 833
>sp|Q9FXA4|PUB26_ARATH U-box domain-containing protein 26 OS=Arabidopsis thaliana GN=PUB26
PE=2 SV=1
Length = 421
Score = 56.6 bits (135), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 33 FVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTDLNPSIA 92
F CP++ +M DPVT+ GQT++R +I+ W CP+T+ L L P+
Sbjct: 18 FRCPISLDLMSDPVTISTGQTYDRTSIDSWIAM-----GNTTCPVTRVALSDFTLIPNHT 72
Query: 93 LRNTIEEWNARNEA 106
LR I+EW N +
Sbjct: 73 LRRLIQEWCVANRS 86
>sp|Q5ZMC3|WSDU1_CHICK WD repeat, SAM and U-box domain-containing protein 1 OS=Gallus
gallus GN=WDSUB1 PE=2 SV=2
Length = 476
Score = 56.6 bits (135), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 31 DAFVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTDLNPS 90
D F+CP+T+++M+DPV +G ++E+EA+E W R + P+T L S L P+
Sbjct: 406 DEFLCPITRELMKDPVIAADGYSYEKEAMENWISNNRRSS-----PMTNLPLPSLVLTPN 460
Query: 91 IALRNTIEEW 100
L+ I W
Sbjct: 461 RTLKMAISRW 470
>sp|Q8GUH1|PUB33_ARATH U-box domain-containing protein 33 OS=Arabidopsis thaliana GN=PUB33
PE=2 SV=2
Length = 834
Score = 56.2 bits (134), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 9/92 (9%)
Query: 11 SGSQSDGSYHFER--LHIEPIYDAFVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRE 68
+ S S+H R I P Y F+CP+ ++VM+DP +G T+E EAI W
Sbjct: 745 ASSGGSSSFHLGRNEHRIAPPY--FICPIFQEVMQDPHVAADGFTYEAEAIRAWL----- 797
Query: 69 NGRKPVCPLTQKELRSTDLNPSIALRNTIEEW 100
+ P+T +L T L + ALR+ I+EW
Sbjct: 798 DSEHDTSPMTNVKLSHTSLIANHALRSAIQEW 829
>sp|Q9FLF4|PUB27_ARATH U-box domain-containing protein 27 OS=Arabidopsis thaliana GN=PUB27
PE=2 SV=1
Length = 420
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 137/323 (42%), Gaps = 77/323 (23%)
Query: 33 FVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTDLNPSIA 92
F CP++ VM+ PV+L G T++R +I++W +G CP T + L++ D P+
Sbjct: 14 FRCPISLDVMKSPVSLCTGVTYDRASIQRWL-----DGGNNTCPATMQILQNKDFIPNRT 68
Query: 93 LRNTIEEWNARNEAAQLDMARKSLNLGSSESDIMPALKYVQYFCQSSRSNKHVVHNSELI 152
L+ IE W+ D R+ + S+E
Sbjct: 69 LQRLIEIWS--------DSVRRRTCVESAE------------------------------ 90
Query: 153 PMIIDMLKSSSRKVRCTALETLRIVVEEDDDNKEILGQGDTVRTIVKFLSHELSREREEA 212
L + +R A++ ++I EE DD +E+L + IV+F RE ++
Sbjct: 91 ------LAAPTRDEIADAIDRVKIEKEERDD-REVLSK------IVRF-----GRESDDN 132
Query: 213 VSLLYELSKSEALCEKIGSINGAILILVGMTSSKSENLLTVEKAEKTLANLEKCENNVRQ 272
L K + + + IN V ++ + L V++A K L+ + ++ R+
Sbjct: 133 RGFLA--GKDDFVKLLVDLINQ-----VDFETTSAAKSLVVQEAVKILSTIRSKVSDRRR 185
Query: 273 MAE----NG--RLQPLLTQILEGPQETKLSLAAFLGDLALNSDVKVLVARTVG---SCLI 323
+ NG RL ++ G E K+ A L +A++++ K+L+A G +
Sbjct: 186 FSNLILTNGRDRLSVIVYLFKTGNVELKIDCAGLLEFIAVDAESKLLIAERDGLITELMK 245
Query: 324 NIMKSGNMQAREAALKALNQISS 346
+I K ++ E++L L ISS
Sbjct: 246 SISKDSDLSLIESSLSCLIAISS 268
>sp|Q503E9|IMA5_DANRE Importin subunit alpha-6 OS=Danio rerio GN=kpna5 PE=2 SV=2
Length = 536
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 78/169 (46%), Gaps = 20/169 (11%)
Query: 643 PPSGFCASIFPC--------FSKQPVI-----TGLCRLHRGLCSLKETFCLLEGHAVEKL 689
PP F A + PC FS P + L L G +T +++ +L
Sbjct: 243 PPPDF-AKVSPCLSVLSRLLFSSDPDVLADACWALSYLSDGPNDKIQT--VIDSGVCRRL 299
Query: 690 IALLDHTNEKVVEASLAALSTVIDDGVDIEQGVMVLCEAQGIKPILDVLLEKRTENLQRR 749
+ LL H++ KVV +L A+ ++ G DI+ V++ C A P L LL E++++
Sbjct: 300 VELLMHSDYKVVSPALRAVGNIVT-GDDIQTQVILNCSA---LPCLLHLLSSPKESIKKE 355
Query: 750 AVWVVERILRTDDIAYEVSGDPNVSTALVDAFQHADYRTRQIAERALKH 798
A W V I + + D NV L++ Q A++RTR+ A A+ +
Sbjct: 356 ACWTVSNITAGNRAQIQAVIDSNVFPVLIEILQKAEFRTRKEAAWAITN 404
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.133 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 274,897,180
Number of Sequences: 539616
Number of extensions: 10996463
Number of successful extensions: 34579
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 109
Number of HSP's successfully gapped in prelim test: 131
Number of HSP's that attempted gapping in prelim test: 34036
Number of HSP's gapped (non-prelim): 507
length of query: 813
length of database: 191,569,459
effective HSP length: 126
effective length of query: 687
effective length of database: 123,577,843
effective search space: 84897978141
effective search space used: 84897978141
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)