Your job contains 1 sequence.
>003530
MAGSWDGGYDSGSQSDGSYHFERLHIEPIYDAFVCPLTKQVMRDPVTLENGQTFEREAIE
KWFKECRENGRKPVCPLTQKELRSTDLNPSIALRNTIEEWNARNEAAQLDMARKSLNLGS
SESDIMPALKYVQYFCQSSRSNKHVVHNSELIPMIIDMLKSSSRKVRCTALETLRIVVEE
DDDNKEILGQGDTVRTIVKFLSHELSREREEAVSLLYELSKSEALCEKIGSINGAILILV
GMTSSKSENLLTVEKAEKTLANLEKCENNVRQMAENGRLQPLLTQILEGPQETKLSLAAF
LGDLALNSDVKVLVARTVGSCLINIMKSGNMQAREAALKALNQISSCEPSAKVLIHAGIL
PPLVKDLFTVGSNHLPMRLKEVSATILANVVNSGHDFDSITVGPDNQTLVSEDIVHNLLH
LISNTGPTIECKLLQVLVGLTSSPTTVLSVVSAIKSSGATISLVQFVEAPQNDLRLASIE
LIQNLSPHMGHELADALRGAVGQLGSLIRVISENVGISKEQAAAVGLLAELPERDLGLTR
QMLDEGAFGLIFSRVKSIQLGETRGSRFVTPFLEGLLSVLARVTFVLSDEPDAIALCCEH
NLAALFIELLQSNGLDKVQMVSATALENLSLESKNLTKLPELPPSGFCASIFPCFSKQPV
ITGLCRLHRGLCSLKETFCLLEGHAVEKLIALLDHTNEKVVEASLAALSTVIDDGVDIEQ
GVMVLCEAQGIKPILDVLLEKRTENLQRRAVWVVERILRTDDIAYEVSGDPNVSTALVDA
FQHADYRTRQIAERALKHIDKIPNFSGIFPNMG
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 003530
(813 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2030462 - symbol:SAUL1 "senescence-associated ... 2587 5.4e-269 1
TAIR|locus:2014584 - symbol:PUB43 "plant U-box 43" specie... 2581 2.3e-268 1
TAIR|locus:2162276 - symbol:PUB15 "Plant U-Box 15" specie... 261 6.3e-19 1
TAIR|locus:2075140 - symbol:PUB13 "plant U-box 13" specie... 171 3.1e-18 2
TAIR|locus:2013990 - symbol:AT1G71020 species:3702 "Arabi... 153 2.8e-17 2
UNIPROTKB|Q5VRH9 - symbol:PUB12 "U-box domain-containing ... 245 3.0e-17 1
TAIR|locus:2017719 - symbol:AT1G23030 species:3702 "Arabi... 240 1.1e-16 1
TAIR|locus:2045334 - symbol:PUB4 "plant U-box 4" species:... 151 8.6e-16 2
TAIR|locus:2082682 - symbol:PUB14 "plant U-box 14" specie... 148 4.6e-15 2
UNIPROTKB|Q0IMG9 - symbol:SPL11 "E3 ubiquitin-protein lig... 234 5.9e-15 2
TAIR|locus:2158252 - symbol:AT5G67340 species:3702 "Arabi... 175 1.8e-12 2
TAIR|locus:2079706 - symbol:PUB9 "plant U-box 9" species:... 150 3.4e-12 2
UNIPROTKB|Q6EUK7 - symbol:PUB4 "U-box domain-containing p... 122 2.9e-11 2
TAIR|locus:2141226 - symbol:PUB8 "plant U-box 8" species:... 185 3.6e-11 1
TAIR|locus:2032472 - symbol:AT1G24330 species:3702 "Arabi... 190 9.4e-11 2
TAIR|locus:2115365 - symbol:AT4G36550 species:3702 "Arabi... 169 9.4e-11 2
TAIR|locus:2008813 - symbol:AT1G67530 species:3702 "Arabi... 193 9.5e-11 2
TAIR|locus:2171810 - symbol:PUB38 "plant U-box 38" specie... 111 3.8e-09 2
TAIR|locus:2154124 - symbol:AT5G62560 species:3702 "Arabi... 110 3.9e-09 2
TAIR|locus:2039265 - symbol:PUB23 "plant U-box 23" specie... 167 4.5e-09 1
TAIR|locus:2079964 - symbol:PUB22 "plant U-box 22" specie... 167 5.1e-09 1
TAIR|locus:2146183 - symbol:AT5G18320 species:3702 "Arabi... 117 6.8e-09 2
TAIR|locus:2100372 - symbol:PUB39 "PLANT U-BOX 39" specie... 112 7.7e-09 2
TAIR|locus:2097390 - symbol:AT3G49810 species:3702 "Arabi... 162 1.9e-08 1
TAIR|locus:2096687 - symbol:AT3G01400 species:3702 "Arabi... 155 4.8e-08 2
TAIR|locus:2090604 - symbol:PUB25 "plant U-box 25" specie... 140 8.1e-08 2
TAIR|locus:2198235 - symbol:AT1G01830 "AT1G01830" species... 144 1.0e-07 2
TAIR|locus:2010424 - symbol:PUB45 "plant U-box 45" specie... 144 1.1e-07 2
TAIR|locus:2013850 - symbol:CMPG1 ""CYS, MET, PRO, and GL... 136 1.2e-07 2
CGD|CAL0001835 - symbol:VAC8 species:5476 "Candida albica... 134 2.1e-07 2
UNIPROTKB|Q59MN0 - symbol:VAC8 "Vacuolar protein 8" speci... 134 2.1e-07 2
TAIR|locus:2194564 - symbol:PUB18 "plant U-box 18" specie... 136 2.4e-07 2
TAIR|locus:2102455 - symbol:AT3G54790 species:3702 "Arabi... 158 2.4e-07 2
TAIR|locus:2098816 - symbol:AT3G61390 species:3702 "Arabi... 150 3.7e-07 1
TAIR|locus:2152049 - symbol:AT5G65920 species:3702 "Arabi... 150 3.9e-07 1
TAIR|locus:2093974 - symbol:PUB29 "plant U-box 29" specie... 146 9.4e-07 1
TAIR|locus:2144846 - symbol:AT5G09800 species:3702 "Arabi... 142 9.5e-07 2
TAIR|locus:2181077 - symbol:SAUR21 "SMALL AUXIN UP RNA 21... 149 9.8e-07 1
ASPGD|ASPL0000008980 - symbol:AN12408 species:162425 "Eme... 146 1.2e-06 2
TAIR|locus:504954932 - symbol:AT5G57035 species:3702 "Ara... 149 1.2e-06 1
ZFIN|ZDB-GENE-061110-97 - symbol:zgc:154085 "zgc:154085" ... 145 1.6e-06 1
TAIR|locus:2178818 - symbol:AT5G58680 "AT5G58680" species... 148 2.0e-06 2
TAIR|locus:2150295 - symbol:ARIA "ARM repeat protein inte... 146 2.2e-06 1
TAIR|locus:505006475 - symbol:IMPA-2 "importin alpha isof... 102 2.3e-06 2
TAIR|locus:2179842 - symbol:ABAP1 "ARMADILLO BTB protein ... 146 2.3e-06 1
UNIPROTKB|F1N1K5 - symbol:KPNA5 "Importin subunit alpha" ... 143 3.1e-06 1
SGD|S000000739 - symbol:VAC8 "Phosphorylated and palmitoy... 134 3.3e-06 2
UNIPROTKB|E1C8F9 - symbol:E1C8F9 "Uncharacterized protein... 145 3.8e-06 1
TAIR|locus:2050659 - symbol:AT2G45920 species:3702 "Arabi... 140 4.0e-06 1
TAIR|locus:2195563 - symbol:PUB19 "plant U-box 19" specie... 135 5.0e-06 2
MGI|MGI:1919387 - symbol:Wdsub1 "WD repeat, SAM and U-box... 140 5.4e-06 1
TAIR|locus:2198165 - symbol:AT1G01660 species:3702 "Arabi... 141 5.6e-06 1
TAIR|locus:2012136 - symbol:PUB26 "plant U-box 26" specie... 129 6.7e-06 2
RGD|1359296 - symbol:Wdsub1 "WD repeat, sterile alpha mot... 139 7.0e-06 1
UNIPROTKB|F1MRF3 - symbol:WDSUB1 "Uncharacterized protein... 138 9.0e-06 1
UNIPROTKB|G3MZA8 - symbol:WDSUB1 "Uncharacterized protein... 138 9.0e-06 1
UNIPROTKB|J9NTP2 - symbol:KPNA5 "Importin subunit alpha" ... 138 1.1e-05 1
UNIPROTKB|Q8N9V3 - symbol:WDSUB1 "WD repeat, SAM and U-bo... 137 1.2e-05 1
UNIPROTKB|F1RTU5 - symbol:KPNA5 "Importin subunit alpha" ... 137 1.4e-05 1
POMBASE|SPBC354.14c - symbol:vac8 "vacuolar protein Vac8 ... 137 1.5e-05 1
MGI|MGI:1918132 - symbol:Armc3 "armadillo repeat containi... 109 1.5e-05 2
UNIPROTKB|O15131 - symbol:KPNA5 "Importin subunit alpha-6... 138 1.6e-05 2
TAIR|locus:2130699 - symbol:AT4G16490 "AT4G16490" species... 135 1.9e-05 1
ZFIN|ZDB-GENE-081030-6 - symbol:trim35-38 "tripartite mot... 134 2.2e-05 1
UNIPROTKB|E1C4J0 - symbol:KPNA5 "Importin subunit alpha" ... 135 2.3e-05 1
UNIPROTKB|G4MZS0 - symbol:MGG_15072 "Importin subunit alp... 116 2.8e-05 2
TAIR|locus:2169861 - symbol:AT5G37490 species:3702 "Arabi... 118 2.8e-05 2
UNIPROTKB|E2QX39 - symbol:WDSUB1 "Uncharacterized protein... 133 3.2e-05 1
UNIPROTKB|F1SV93 - symbol:KPNA6 "Importin subunit alpha" ... 132 3.4e-05 2
TAIR|locus:2043709 - symbol:AT2G45720 "AT2G45720" species... 133 4.0e-05 1
UNIPROTKB|Q5ZMC3 - symbol:WDSUB1 "WD repeat, SAM and U-bo... 132 4.1e-05 1
TAIR|locus:2198190 - symbol:PUB54 "plant U-box 54" specie... 128 4.9e-05 1
TAIR|locus:2099634 - symbol:AT3G03440 "AT3G03440" species... 130 5.2e-05 1
UNIPROTKB|F1LT58 - symbol:F1LT58 "Uncharacterized protein... 128 5.4e-05 2
ZFIN|ZDB-GENE-050522-22 - symbol:kpna5 "karyopherin alpha... 140 6.4e-05 2
TAIR|locus:2117343 - symbol:AT4G25160 species:3702 "Arabi... 133 7.0e-05 1
UNIPROTKB|G5E536 - symbol:KPNA6 "Importin subunit alpha" ... 130 7.1e-05 2
UNIPROTKB|Q0V7M0 - symbol:KPNA6 "Importin subunit alpha-7... 130 7.2e-05 2
TAIR|locus:2201205 - symbol:AT1G23180 "AT1G23180" species... 117 7.5e-05 3
TAIR|locus:2013688 - symbol:PUB17 "plant U-box 17" specie... 132 7.5e-05 1
RGD|1561324 - symbol:Kpna5 "karyopherin alpha 5 (importin... 130 8.0e-05 1
TAIR|locus:2176177 - symbol:AT5G51270 species:3702 "Arabi... 132 8.8e-05 1
MGI|MGI:103560 - symbol:Kpna1 "karyopherin (importin) alp... 129 0.00010 1
FB|FBgn0031905 - symbol:CG5155 species:7227 "Drosophila m... 130 0.00011 1
RGD|1306570 - symbol:Kpna6 "karyopherin alpha 6 (importin... 128 0.00012 2
MGI|MGI:1100836 - symbol:Kpna6 "karyopherin (importin) al... 128 0.00012 2
UNIPROTKB|F5H4G7 - symbol:KPNA6 "Importin subunit alpha" ... 127 0.00015 2
UNIPROTKB|Q5ZJZ0 - symbol:KPNA6 "Importin subunit alpha" ... 127 0.00015 2
UNIPROTKB|F1PM77 - symbol:KPNA6 "Importin subunit alpha" ... 127 0.00015 2
UNIPROTKB|O60684 - symbol:KPNA6 "Importin subunit alpha-7... 127 0.00015 2
UNIPROTKB|J9NST3 - symbol:KPNA6 "Importin subunit alpha" ... 127 0.00015 2
UNIPROTKB|F5GYL8 - symbol:KPNA6 "Importin subunit alpha" ... 127 0.00015 2
UNIPROTKB|Q5ZML1 - symbol:KPNA1 "Importin subunit alpha-1... 127 0.00017 1
TAIR|locus:2146213 - symbol:AT5G18340 species:3702 "Arabi... 96 0.00017 2
UNIPROTKB|I3L9F7 - symbol:KPNA1 "Importin subunit alpha" ... 131 0.00018 2
SGD|S000005133 - symbol:SRP1 "Karyopherin alpha homolog" ... 111 0.00019 2
TAIR|locus:2103351 - symbol:ARABIDILLO-2 "AT3G60350" spec... 129 0.00022 1
TAIR|locus:2198180 - symbol:AT1G01670 species:3702 "Arabi... 123 0.00025 1
UNIPROTKB|F1PFK6 - symbol:KPNA1 "Importin subunit alpha" ... 131 0.00029 2
UNIPROTKB|P52294 - symbol:KPNA1 "Importin subunit alpha-1... 131 0.00029 2
WARNING: Descriptions of 15 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2030462 [details] [associations]
symbol:SAUL1 "senescence-associated E3 ubiquitin ligase
1" species:3702 "Arabidopsis thaliana" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0070696 "transmembrane receptor
protein serine/threonine kinase binding" evidence=IPI] [GO:0005515
"protein binding" evidence=IPI] [GO:0010115 "regulation of abscisic
acid biosynthetic process" evidence=IMP] [GO:0010150 "leaf
senescence" evidence=IMP] [GO:0010271 "regulation of chlorophyll
catabolic process" evidence=IMP] [GO:0010380 "regulation of
chlorophyll biosynthetic process" evidence=IMP] [GO:0090359
"negative regulation of abscisic acid biosynthetic process"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 PROSITE:PS50176 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC069251 GO:GO:0010150
GO:GO:0010380 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0010271
GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40 eggNOG:NOG276937
HOGENOM:HOG000241783 ProtClustDB:CLSN2682757 EMBL:AY059775
EMBL:AY096753 IPI:IPI00539405 IPI:IPI00886504 RefSeq:NP_564125.2
UniGene:At.21947 ProteinModelPortal:Q9LM76 SMR:Q9LM76 IntAct:Q9LM76
STRING:Q9LM76 PaxDb:Q9LM76 PRIDE:Q9LM76 EnsemblPlants:AT1G20780.1
GeneID:838668 KEGG:ath:AT1G20780 TAIR:At1g20780 InParanoid:Q9LM76
OMA:VARDYNL PhylomeDB:Q9LM76 Genevestigator:Q9LM76 GO:GO:0090359
Uniprot:Q9LM76
Length = 801
Score = 2587 (915.7 bits), Expect = 5.4e-269, P = 5.4e-269
Identities = 518/794 (65%), Positives = 645/794 (81%)
Query: 20 HFERLHIEPIYDAFVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQ 79
HFER ++ IY+AF+CPLTK+VM DPVTLENG+TFEREAIEKWFKECR++GR P CPLT
Sbjct: 15 HFER-GVDHIYEAFICPLTKEVMHDPVTLENGRTFEREAIEKWFKECRDSGRPPSCPLTS 73
Query: 80 KELRSTDLNPSIALRNTIEEWNARNEAAQLDMARKSLNLGSSESDIMPALKYVQYFCQSS 139
+EL STD++ SIALRNTIEEW +RN+AA+LD+AR+SL LG++E+DI+ AL +V+ C++
Sbjct: 74 QELTSTDVSASIALRNTIEEWRSRNDAAKLDIARQSLFLGNAETDILQALMHVRQICRTI 133
Query: 140 RSNKHVVHNSELIPMIIDMLKSSSRKVRCTALETLRIVVEEDDDNKEILGQGDTVRTIVK 199
RSN+H V NS+LI MIIDMLKS+S +VR AL+TL++VVE DD++K I+ +GDTVRT+VK
Sbjct: 134 RSNRHGVRNSQLIHMIIDMLKSTSHRVRYKALQTLQVVVEGDDESKAIVAEGDTVRTLVK 193
Query: 200 FLSHELSREREEAVSLLYELSKSEALCEKIGSINGAILILVGMTSSKSENLLTVEKAEKT 259
FLSHE S+ RE AVSLL+ELSKSEALCEKIGSI+GA+++LVG+TSS SEN+ VEKA++T
Sbjct: 194 FLSHEPSKGREAAVSLLFELSKSEALCEKIGSIHGALILLVGLTSSNSENVSIVEKADRT 253
Query: 260 LANLEKCENNVRQMAENGRLQPLLTQILEGPQETKLSLAAFLGDLALNSDVKVLVARTVG 319
L N+E+ E VRQMA GRLQPLL ++LEG ETKLS+A+FLG+L LN+DVKVLVA+TVG
Sbjct: 254 LENMERSEEIVRQMASYGRLQPLLGKLLEGSPETKLSMASFLGELPLNNDVKVLVAQTVG 313
Query: 320 SCLINIMKSGNMQAREAALKALNQISSCEPSAKVLIHAGILPPLVKDLFTVGSNHLPMRL 379
S L+++M+SG+M REAALKALN+ISS E SAKVLI GILPPL+KDLF VG N+LP+RL
Sbjct: 314 SSLVDLMRSGDMPQREAALKALNKISSFEGSAKVLISKGILPPLIKDLFYVGPNNLPIRL 373
Query: 380 KEVSATILANVVNSGHDFDSITVGPDNQTLVSEDIVHNLLHLISNTGPTIECKLLQXXXX 439
KEVSATILAN+VN G+DFD T LVSE+ V NLLHLISNTGP I+CKLL+
Sbjct: 374 KEVSATILANIVNIGYDFDKAT-------LVSENRVENLLHLISNTGPAIQCKLLEVLVG 426
Query: 440 XXXXXXXXXXXXXAIKSSGATISLVQFVEAPQND-LRLASIELIQNLSPHMGHELADALR 498
AIK+SGA ISLVQF+E +ND LRLASI+L+ NLSP M ELA AL
Sbjct: 427 LTSCPKTVPKVVYAIKTSGAIISLVQFIEVRENDDLRLASIKLLHNLSPFMSEELAKALC 486
Query: 499 GAVGQLGSLIRVISENVGISKEQAAAVGLLAELPERDLGLTRQMLDEGAFGLIFSRVKSI 558
G GQLGSL+ +ISE I++EQAAA GLLAELP+RDLGLT++ML+ GAF I S+V I
Sbjct: 487 GTAGQLGSLVAIISEKTPITEEQAAAAGLLAELPDRDLGLTQEMLEVGAFEKIISKVFGI 546
Query: 559 QLGETRGSRFVTPFLEGLLSVLARVTFVLSDEPDAIALCCEHNLAALFIELLQSNGLDKV 618
+ G+ +G RFV PFLEGL+ +LAR+TFV + E AI C EH++A+LF+ LLQSNG D +
Sbjct: 547 RQGDIKGMRFVNPFLEGLVRILARITFVFNKEARAINFCREHDVASLFLHLLQSNGQDNI 606
Query: 619 QMVSATALENLSLESKNLTKLPELPPSGFCASIFPCFSKQPVITGLCRLHRGLCSLKETF 678
QMVSA ALENLSLES LT++P+ PP +C SIF C K V+ GLC++H+G+CSL+ETF
Sbjct: 607 QMVSAMALENLSLESIKLTRMPDPPPVNYCGSIFSCVRKPHVVNGLCKIHQGICSLRETF 666
Query: 679 CLLEGHAVEKLIALLDHTNEKVVEASLAALSTVIDDGVDIEQGVMVLCEAQGIKPILDVL 738
CL+EG AVEKL+ALLDH N KVVEA+LAALS++++DG+D+E+GV +L EA GI+ IL+VL
Sbjct: 667 CLVEGGAVEKLVALLDHENVKVVEAALAALSSLLEDGLDVEKGVKILDEADGIRHILNVL 726
Query: 739 LEKRTENLQRRAVWVVERILRTDDIAYEVSGDPNVSTALVDAFQHADYRTRQIAERALKH 798
E RTE L RRAVW+VERILR +DIA EV+ + ++S ALVDAFQ+AD+RTRQIAE ALKH
Sbjct: 727 RENRTERLTRRAVWMVERILRIEDIAREVAEEQSLSAALVDAFQNADFRTRQIAENALKH 786
Query: 799 IDKIPNFSGIFPNM 812
IDKIPNFS IFPN+
Sbjct: 787 IDKIPNFSSIFPNI 800
>TAIR|locus:2014584 [details] [associations]
symbol:PUB43 "plant U-box 43" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 PROSITE:PS50176 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC012394 GO:GO:0004842
GO:GO:0000151 UniGene:At.16778 UniGene:At.66969 HSSP:Q8VZ40
EMBL:AK226857 IPI:IPI00516849 PIR:E96791 RefSeq:NP_001077833.1
RefSeq:NP_177765.1 ProteinModelPortal:Q9SFX2 SMR:Q9SFX2
PaxDb:Q9SFX2 PRIDE:Q9SFX2 EnsemblPlants:AT1G76390.1
EnsemblPlants:AT1G76390.2 GeneID:843971 KEGG:ath:AT1G76390
TAIR:At1g76390 eggNOG:NOG276937 HOGENOM:HOG000241783
InParanoid:Q9SFX2 OMA:LTKQVMH PhylomeDB:Q9SFX2
ProtClustDB:CLSN2682757 Genevestigator:Q9SFX2 Uniprot:Q9SFX2
Length = 811
Score = 2581 (913.6 bits), Expect = 2.3e-268, P = 2.3e-268
Identities = 515/790 (65%), Positives = 640/790 (81%)
Query: 26 IEPIYDAFVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRST 85
I+ IY+AF+CPLTKQVM +PVTLENGQTFEREAIEKWF+ECRENG+ CP+T KEL T
Sbjct: 22 IDNIYEAFICPLTKQVMHNPVTLENGQTFEREAIEKWFQECRENGQPLSCPITSKELSIT 81
Query: 86 DLNPSIALRNTIEEWNARNEAAQLDMARKSLNLGSSESDIMPALKYVQYFCQSSRSNKHV 145
DL+PSIALRNTIEEW ARN+A +LD+AR+SL LG++E++I+ ALK V+ C++ R +
Sbjct: 82 DLSPSIALRNTIEEWRARNDALKLDIARQSLYLGNAETNILLALKNVREICRNIRKIRQR 141
Query: 146 VHNSELIPMIIDMLKSSSRKVRCTALETLRIVVEEDDDNKEILGQGDTVRTIVKFLSHEL 205
V N +L+ +I DMLKSSS +VRC AL+TL++VVE D+++K I+ +GDTVRTIVKFLS E
Sbjct: 142 VCNPQLVRLITDMLKSSSHEVRCKALQTLQVVVEGDEESKAIVAEGDTVRTIVKFLSQEP 201
Query: 206 SREREEAVSLLYELSKSEALCEKIGSINGAILILVGMTSSKSENLLTVEKAEKTLANLEK 265
S+ RE AVS+L+ELSKSEALCEKIGSI+GAI++LVG+TSSKSEN+ TVEKA+KTL NLE+
Sbjct: 202 SKGREAAVSVLFELSKSEALCEKIGSIHGAIILLVGLTSSKSENVSTVEKADKTLTNLER 261
Query: 266 CENNVRQMAENGRLQPLLTQILEGPQETKLSLAAFLGDLALNSDVKVLVARTVGSCLINI 325
E NVRQMA NGRLQPLL ++LEG ETK+S+A +LG LALN+DVKV+VA+TVGS LI++
Sbjct: 262 SEENVRQMAINGRLQPLLAKLLEGSPETKVSMAFYLGVLALNNDVKVIVAQTVGSSLIDL 321
Query: 326 MKSGNMQAREAALKALNQISSCEPSAKVLIHAGILPPLVKDLFTVGSNHLPMRLKEVSAT 385
M++ +M REAAL ALN ISS E SAK+LI+ GILPPL+KDLF VG N LP+RLKEVSAT
Sbjct: 322 MRTRDMSQREAALGALNNISSFEGSAKLLINTGILPPLIKDLFYVGPNQLPIRLKEVSAT 381
Query: 386 ILANVVNSGHDFDSITVGPDNQTLVSEDIVHNLLHLISNTGPTIECKLLQXXXXXXXXXX 445
ILAN+VN G+DFD + VGP +QTLVSE+IV NLL L SNTGP I+ KLL
Sbjct: 382 ILANIVNIGYDFDKVPVGPHHQTLVSEEIVENLLQLTSNTGPEIQGKLLAVLVGLTSCPN 441
Query: 446 XXXXXXXAIKSSGATISLVQFVEAPQND-LRLASIELIQNLSPHMGHELADALRGAVGQL 504
AI++S A ISLVQFVE +ND LRLASI+L+ N+SPHM ELA+ALR VGQL
Sbjct: 442 SVINVVSAIRNSAAIISLVQFVEIHENDDLRLASIKLLHNISPHMSEELANALRSTVGQL 501
Query: 505 GSLIRVISENVG-ISKEQAAAVGLLAELPERDLGLTRQMLDEGAFGLIFSRVKSIQLGET 563
GSL+ +ISEN I++EQAAA GLLAELPERDL LT ++L EGAF I S++ I+ GE
Sbjct: 502 GSLVSIISENTPTITEEQAAAAGLLAELPERDLVLTMRLLREGAFEKIISKIVGIRQGEI 561
Query: 564 RGSRFVTPFLEGLLSVLARVTFVLSDEPDAIALCCEHNLAALFIELLQSNGLDKVQMVSA 623
RG RF FLEGL+S+LAR+TF L+ E DA CCE NL +LF++LLQSN D +Q SA
Sbjct: 562 RGIRFERTFLEGLVSILARITFALTKETDATLFCCEKNLPSLFLDLLQSNSQDNIQRASA 621
Query: 624 TALENLSLESKNLTKLPELPPSGFCASIFPCFSKQPVITGLCRLHRGLCSLKETFCLLEG 683
TALENLSLESKNLTK+PELPP +C SIF C SK PV+ G+C++H+G+CS++E+FCL+EG
Sbjct: 622 TALENLSLESKNLTKIPELPPPTYCVSIFSCLSKPPVVLGICKIHQGICSVRESFCLVEG 681
Query: 684 HAVEKLIALLDHTNEKVVEASLAALSTVIDDGVDIEQGVMVLCEAQGIKPILDVLLEKRT 743
AV+KL+ LLDH N+KVV +LAALST+++DG+D+ QGV ++ EA GI PIL+VLLE RT
Sbjct: 682 QAVDKLVDLLDHENDKVVGPALAALSTLLEDGLDVVQGVRLIDEADGITPILNVLLENRT 741
Query: 744 ENLQRRAVWVVERILRTDDIAYEVSGDPNVSTALVDAFQHADYRTRQIAERALKHIDKIP 803
ENL+ RAVW+VERILR ++IA EV + NV+ ALVDAFQ+AD+RTRQIAE+AL+HIDKIP
Sbjct: 742 ENLRIRAVWMVERILRIEEIAREVGEEQNVTAALVDAFQNADFRTRQIAEKALRHIDKIP 801
Query: 804 NFSGIFPNMG 813
NFSGIF N+G
Sbjct: 802 NFSGIFTNIG 811
>TAIR|locus:2162276 [details] [associations]
symbol:PUB15 "Plant U-Box 15" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0006944 "cellular membrane
fusion" evidence=RCA] [GO:0030048 "actin filament-based movement"
evidence=RCA] [GO:0048610 "cellular process involved in
reproduction" evidence=RCA] [GO:0048868 "pollen tube development"
evidence=RCA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AB016888 GO:GO:0000151 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:AK175585 IPI:IPI00547462 RefSeq:NP_199049.2
UniGene:At.51075 ProteinModelPortal:Q681N2 SMR:Q681N2 PaxDb:Q681N2
PRIDE:Q681N2 EnsemblPlants:AT5G42340.1 GeneID:834240
KEGG:ath:AT5G42340 TAIR:At5g42340 eggNOG:NOG263115
InParanoid:Q681N2 OMA:CCHDGSK PhylomeDB:Q681N2
ProtClustDB:CLSN2681658 Genevestigator:Q681N2 Uniprot:Q681N2
Length = 660
Score = 261 (96.9 bits), Expect = 6.3e-19, P = 6.3e-19
Identities = 92/361 (25%), Positives = 174/361 (48%)
Query: 33 FVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTDLNPSIA 92
F+CP+T ++M DPV + GQT+E+E+I+KWF + G K CP T++EL L P+ A
Sbjct: 294 FLCPITLEIMLDPVIIATGQTYEKESIQKWF----DAGHK-TCPKTRQELDHLSLAPNFA 348
Query: 93 LRNTIEEWNARN--EAAQLDMARKSLN------------LGSSE-SDIMPALKYVQYFCQ 137
L+N I +W +N + + +++ S N L SS+ + ++K ++ +
Sbjct: 349 LKNLIMQWCEKNNFKIPEKEVSPDSQNEQKDEVSLLVEALSSSQLEEQRRSVKQMRLLAR 408
Query: 138 SSRSNKHVVHNSELIPMIIDMLKSSSRKVRCTALETLRIVVEEDDDNKEILGQGDTVRTI 197
+ N+ ++ N+ IP+++ +L ++ A+ TL + + D+ NK+++ + I
Sbjct: 409 ENPENRVLIANAGAIPLLVQLLSYPDSGIQENAVTTL-LNLSIDEVNKKLISNEGAIPNI 467
Query: 198 VKFLSHELSREREEAVSLLYELSKSEALCEKIGSINGAILILVGMTSSKSENLLTVEKAE 257
++ L + RE + + L+ LS + IG NG I LV + + L + A
Sbjct: 468 IEILENGNREARENSAAALFSLSMLDENKVTIGLSNG-IPPLVDLLQHGT--LRGKKDAL 524
Query: 258 KTLANLEKCENNVRQMAENGRLQPLLTQILE---GPQETKLSLAAFLGDLALNSDVKVLV 314
L NL N + + G +QPLL + + G + LS+ L A + + + +
Sbjct: 525 TALFNLSLNSANKGRAIDAGIVQPLLNLLKDKNLGMIDEALSILLLL---ASHPEGRQAI 581
Query: 315 AR-TVGSCLINIMKSGNMQAREAALKALNQISSCEPS-AKVLIHAGILPPLVKDLFTVGS 372
+ + L+ ++ G + +E A L ++ S S + G+ LV ++ T G+
Sbjct: 582 GQLSFIETLVEFIRQGTPKNKECATSVLLELGSNNSSFILAALQFGVYEYLV-EITTSGT 640
Query: 373 N 373
N
Sbjct: 641 N 641
>TAIR|locus:2075140 [details] [associations]
symbol:PUB13 "plant U-box 13" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0016567
"protein ubiquitination" evidence=IEA;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] [GO:0042742 "defense response to bacterium"
evidence=IGI] [GO:0000902 "cell morphogenesis" evidence=RCA]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
[GO:0006499 "N-terminal protein myristoylation" evidence=RCA]
[GO:0016049 "cell growth" evidence=RCA] [GO:0032880 "regulation of
protein localization" evidence=RCA] [GO:0046777 "protein
autophosphorylation" evidence=RCA] [GO:0048193 "Golgi vesicle
transport" evidence=RCA] [GO:0048767 "root hair elongation"
evidence=RCA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0042742 EMBL:AL133314
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:AY042791 EMBL:AY128813
IPI:IPI00531350 PIR:T45588 RefSeq:NP_190235.1 UniGene:At.23070
ProteinModelPortal:Q9SNC6 SMR:Q9SNC6 STRING:Q9SNC6 PaxDb:Q9SNC6
PRIDE:Q9SNC6 EnsemblPlants:AT3G46510.1 GeneID:823804
KEGG:ath:AT3G46510 TAIR:At3g46510 eggNOG:NOG269633
InParanoid:Q9SNC6 OMA:DSRIQEH PhylomeDB:Q9SNC6
ProtClustDB:CLSN2684834 Genevestigator:Q9SNC6 Uniprot:Q9SNC6
Length = 660
Score = 171 (65.3 bits), Expect = 3.1e-18, Sum P(2) = 3.1e-18
Identities = 36/80 (45%), Positives = 48/80 (60%)
Query: 26 IEPIYDAFVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRST 85
I I D F CP++ ++MRDPV + +GQT+ER IEKW E G CP TQ+ L ST
Sbjct: 253 IPVIPDDFRCPISLEMMRDPVIVSSGQTYERTCIEKWI----EGGHS-TCPKTQQALTST 307
Query: 86 DLNPSIALRNTIEEWNARNE 105
L P+ LR+ I +W N+
Sbjct: 308 TLTPNYVLRSLIAQWCEAND 327
Score = 136 (52.9 bits), Expect = 3.1e-18, Sum P(2) = 3.1e-18
Identities = 72/309 (23%), Positives = 139/309 (44%)
Query: 89 PSIALR-NTIEEWNARNEAAQLDMARKSLNLGSSESDIMPALKYVQYFCQSSRSNKHVVH 147
P +LR + +++ EA +++ L G+ E D A ++ + + N+ +
Sbjct: 333 PPSSLRPRKVSSFSSPAEANKIEDLMWRLAYGNPE-DQRSAAGEIRLLAKRNADNRVAIA 391
Query: 148 NSELIPMIIDMLKSSSRKVR---CTALETLRIVVEEDDDNKEILGQGDTVRTIVKFLSHE 204
+ IP+++ +L + +++ TAL L I ++NK + + IV+ L
Sbjct: 392 EAGAIPLLVGLLSTPDSRIQEHSVTALLNLSIC----ENNKGAIVSAGAIPGIVQVLKKG 447
Query: 205 LSREREEAVSLLYELSKSEALCEKIGSINGAILILVGMTSSKSENLLTVEKAEKTLANLE 264
RE A + L+ LS + IG++ GAI LV + + ++ + A L NL
Sbjct: 448 SMEARENAAATLFSLSVIDENKVTIGAL-GAIPPLVVLLNEGTQR--GKKDAATALFNLC 504
Query: 265 KCENNVRQMAENGRLQPLLTQILEGPQETKLSLA-AFLGDLALNSDVKVLVARTVG-SCL 322
+ N + G + P LT++L P + A A L L+ + + K ++ + L
Sbjct: 505 IYQGNKGKAIRAGVI-PTLTRLLTEPGSGMVDEALAILAILSSHPEGKAIIGSSDAVPSL 563
Query: 323 INIMKSGNMQAREAALKALNQISSCEPSAKVLIHA-GILPPLVKDLFTVGSNHLPMRLKE 381
+ +++G+ + RE A L + S +P V G++ PL+ DL G++ R K
Sbjct: 564 VEFIRTGSPRNRENAAAVLVHLCSGDPQHLVEAQKLGLMGPLI-DLAGNGTD----RGKR 618
Query: 382 VSATILANV 390
+A +L +
Sbjct: 619 KAAQLLERI 627
Score = 131 (51.2 bits), Expect = 5.7e-17, Sum P(3) = 5.7e-17
Identities = 53/198 (26%), Positives = 93/198 (46%)
Query: 234 GAILILVGMTSSKSENLLTVEKAEKTLANLEKCENNVRQMAENGRLQPLLTQILE-GPQE 292
GAI +LVG+ S+ + E + L NL CENN + G + P + Q+L+ G E
Sbjct: 394 GAIPLLVGLLSTPDSRIQ--EHSVTALLNLSICENNKGAIVSAGAI-PGIVQVLKKGSME 450
Query: 293 TKLSLAAFLGDLALNSDVKVLVARTVGSC--LINIMKSGNMQAREAALKALNQISSCEPS 350
+ + AA L L++ + KV + +G+ L+ ++ G + ++ A AL + + +
Sbjct: 451 ARENAAATLFSLSVIDENKVTIG-ALGAIPPLVVLLNEGTQRGKKDAATALFNLCIYQGN 509
Query: 351 AKVLIHAGILPPLVKDLFTVGSNHLPMRLKEVSATILANVVNSGHDFDSITVGPDNQTLV 410
I AG++P L + L GS + + + ILA + S H P+ + ++
Sbjct: 510 KGKAIRAGVIPTLTRLLTEPGSG-----MVDEALAILA--ILSSH--------PEGKAII 554
Query: 411 -SEDIVHNLLHLISNTGP 427
S D V +L+ I P
Sbjct: 555 GSSDAVPSLVEFIRTGSP 572
Score = 103 (41.3 bits), Expect = 6.0e-16, Sum P(3) = 6.0e-16
Identities = 47/153 (30%), Positives = 77/153 (50%)
Query: 267 ENNVRQMAENGRLQPLLTQILEGPQET--KLSLAAFLG-DLALNSDVKVLVARTVGSCLI 323
+N V +AE G + PLL +L P + S+ A L + N+ ++ A + ++
Sbjct: 385 DNRVA-IAEAGAI-PLLVGLLSTPDSRIQEHSVTALLNLSICENNKGAIVSAGAIPG-IV 441
Query: 324 NIMKSGNMQAREAALKALNQISSCEPSAKVLIHA-GILPPLVKDLFTVGSNHLPMRLKEV 382
++K G+M+ARE A L +S + + KV I A G +PPLV L G+ R K+
Sbjct: 442 QVLKKGSMEARENAAATLFSLSVIDEN-KVTIGALGAIPPLVV-LLNEGTQ----RGKKD 495
Query: 383 SATILANV-VNSGHDFDSITVG--PDNQTLVSE 412
+AT L N+ + G+ +I G P L++E
Sbjct: 496 AATALFNLCIYQGNKGKAIRAGVIPTLTRLLTE 528
Score = 103 (41.3 bits), Expect = 8.4e-15, Sum P(2) = 8.4e-15
Identities = 48/208 (23%), Positives = 90/208 (43%)
Query: 141 SNKHVVHNSELIPMIIDMLKSSSRKVRCTALETLRIVVEEDDDNKEILGQGDTVRTIVKF 200
+NK + ++ IP I+ +LK S + R A TL + D+NK +G + +V
Sbjct: 426 NNKGAIVSAGAIPGIVQVLKKGSMEARENAAATL-FSLSVIDENKVTIGALGAIPPLVVL 484
Query: 201 LSHELSREREEAVSLLYELSKSEALCEKIGSIN-GAILILVGMTSSKSENLLTVEKAEKT 259
L+ R +++A + L+ L + K +I G I L + + + V++A
Sbjct: 485 LNEGTQRGKKDAATALFNLCIYQG--NKGKAIRAGVIPTLTRLLTEPGSGM--VDEALAI 540
Query: 260 LANLEKCENNVRQMAENGRLQPLLTQILEGPQETKLSLAAFLGDLALNSDVKVLVARTVG 319
LA L + + + L+ I G + + AA L L ++ A+ +G
Sbjct: 541 LAILSSHPEGKAIIGSSDAVPSLVEFIRTGSPRNRENAAAVLVHLCSGDPQHLVEAQKLG 600
Query: 320 SC--LINIMKSGNMQAREAALKALNQIS 345
LI++ +G + + A + L +IS
Sbjct: 601 LMGPLIDLAGNGTDRGKRKAAQLLERIS 628
Score = 83 (34.3 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 37/142 (26%), Positives = 64/142 (45%)
Query: 140 RSNKHVVHNSELIPMIIDMLKSSSRKVRCTALETLRIVVEEDDDNKEILGQGDTVRTIVK 199
+ NK + +IP + +L + AL L I+ + K I+G D V ++V+
Sbjct: 507 QGNKGKAIRAGVIPTLTRLLTEPGSGMVDEALAILAIL-SSHPEGKAIIGSSDAVPSLVE 565
Query: 200 FLSHELSREREEAVSLLYELSKSEA--LCE--KIGSINGAILILVGMTSSKSENLLT--V 253
F+ R RE A ++L L + L E K+G + G ++ L G + + + +
Sbjct: 566 FIRTGSPRNRENAAAVLVHLCSGDPQHLVEAQKLG-LMGPLIDLAGNGTDRGKRKAAQLL 624
Query: 254 EKAEKTLANLEKCENNVRQMAE 275
E+ + LA +K E V Q E
Sbjct: 625 ERISR-LAEQQK-ETAVSQPEE 644
Score = 58 (25.5 bits), Expect = 1.5e-10, Sum P(3) = 1.5e-10
Identities = 30/118 (25%), Positives = 52/118 (44%)
Query: 453 AIKSSGATISLVQFVEAPQNDLRLASIELIQNLSPHMGHELADALRGAV---GQLGSLIR 509
AI +GA LV + P + ++ S+ + NLS + + +GA+ G + +++
Sbjct: 389 AIAEAGAIPLLVGLLSTPDSRIQEHSVTALLNLS------ICENNKGAIVSAGAIPGIVQ 442
Query: 510 VISENVGISKEQAAAVGLLAELPERDLGLTRQMLDEGAFGLIFSRVKSIQLGETRGSR 567
V+ + ++E AAA L L D + GA G I V + G RG +
Sbjct: 443 VLKKGSMEARENAAAT--LFSLSVID----ENKVTIGALGAIPPLVVLLNEGTQRGKK 494
Score = 55 (24.4 bits), Expect = 6.0e-16, Sum P(3) = 6.0e-16
Identities = 34/143 (23%), Positives = 61/143 (42%)
Query: 453 AIKSSGATISLVQFVEAPQNDLRLASIELIQNLSPHMGHELADALRGAVGQLGSLIRVIS 512
AI++ G +L + + P + + ++ ++ LS H A+ G+ + SL+ I
Sbjct: 513 AIRA-GVIPTLTRLLTEPGSGMVDEALAILAILS---SHPEGKAIIGSSDAVPSLVEFIR 568
Query: 513 ENVGISKEQAAAVGLLAELPERDLGLTRQMLDEGAFGLIFSRVKSIQLGETRGSRFVTPF 572
++E AAAV L L D + +++ GL+ + G RG R
Sbjct: 569 TGSPRNRENAAAV--LVHLCSGD---PQHLVEAQKLGLMGPLIDLAGNGTDRGKRKAAQL 623
Query: 573 LEGL--LSVLARVTFVLSDEPDA 593
LE + L+ + T V E +A
Sbjct: 624 LERISRLAEQQKETAVSQPEEEA 646
Score = 47 (21.6 bits), Expect = 1.5e-10, Sum P(3) = 1.5e-10
Identities = 25/115 (21%), Positives = 47/115 (40%)
Query: 685 AVEKLIALLDHTNEKVVEASLAALSTVIDDGVDIEQGVMVLCEAQGIKPILDVLLEKRTE 744
A+ L+ LL+ ++ + + AL + I QG G+ P L LL +
Sbjct: 477 AIPPLVVLLNEGTQRGKKDAATALFNLC-----IYQGNKGKAIRAGVIPTLTRLLTEPGS 531
Query: 745 NLQRRAVWVVERILRTDDIAYEVSGDPNVSTALVDAFQHADYRTRQIAERALKHI 799
+ A+ ++ IL + + G + +LV+ + R R+ A L H+
Sbjct: 532 GMVDEALAILA-ILSSHPEGKAIIGSSDAVPSLVEFIRTGSPRNRENAAAVLVHL 585
Score = 41 (19.5 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 34/155 (21%), Positives = 64/155 (41%)
Query: 495 DALRGAVGQLGSLIRVISENVGISKEQAAAVGLLAELPER-DLGLTRQMLDEGA--FGL- 550
+A A L SL VI EN K A+G + L + G R D F L
Sbjct: 450 EARENAAATLFSL-SVIDEN----KVTIGALGAIPPLVVLLNEGTQRGKKDAATALFNLC 504
Query: 551 IF--SRVKSIQLGETRG-SRFVTPFLEGLLSVLARVTFVLSDEPDAIALCCEHNLAALFI 607
I+ ++ K+I+ G +R +T G++ + +LS P+ A+ + +
Sbjct: 505 IYQGNKGKAIRAGVIPTLTRLLTEPGSGMVDEALAILAILSSHPEGKAIIGSSDAVPSLV 564
Query: 608 ELLQSNGLDKVQMVSATALENLSLESKNLTKLPEL 642
E +++ + +A + S + ++L + +L
Sbjct: 565 EFIRTGSPRNRENAAAVLVHLCSGDPQHLVEAQKL 599
Score = 37 (18.1 bits), Expect = 5.7e-17, Sum P(3) = 5.7e-17
Identities = 13/50 (26%), Positives = 23/50 (46%)
Query: 581 ARVTFVLSDEPDAIALCCEHNLAALFIELLQSNGLDKVQMVSATALENLS 630
A + + S +P + + L I+L NG D+ + +A LE +S
Sbjct: 580 AVLVHLCSGDPQHLVEAQKLGLMGPLIDLA-GNGTDRGKRKAAQLLERIS 628
>TAIR|locus:2013990 [details] [associations]
symbol:AT1G71020 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002684 GenomeReviews:CT485782_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC016972
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AC008148 HOGENOM:HOG000238412 EMBL:AY075626 EMBL:AY142062
EMBL:AK220971 IPI:IPI00534706 PIR:E96734 RefSeq:NP_177258.3
UniGene:At.43068 HSSP:Q8VZ40 ProteinModelPortal:Q9C9A6 SMR:Q9C9A6
IntAct:Q9C9A6 PaxDb:Q9C9A6 PRIDE:Q9C9A6 EnsemblPlants:AT1G71020.1
GeneID:843442 KEGG:ath:AT1G71020 TAIR:At1g71020 eggNOG:NOG261082
InParanoid:Q9C9A6 OMA:FQARESS PhylomeDB:Q9C9A6
ProtClustDB:CLSN2681864 Genevestigator:Q9C9A6 Uniprot:Q9C9A6
Length = 628
Score = 153 (58.9 bits), Expect = 2.8e-17, Sum P(2) = 2.8e-17
Identities = 53/209 (25%), Positives = 103/209 (49%)
Query: 181 DDDNKEILGQGDTVRTIVKFLSHELSREREEAVSLLYELSKSEALCEKIGSINGAILILV 240
D +++ G +R +V LS + +R AVS + LSK + + GAI +LV
Sbjct: 330 DGSFRDLSGDMSAIRALVCKLSSQSIEDRRTAVSEIRSLSKRSTDNRILIAEAGAIPVLV 389
Query: 241 GMTSSKSENLLTVEKAEKTLANLEKCENNVRQMAENGRLQPLLTQILEGPQETKLSLAAF 300
+ +S + T E A + NL E+N + G + ++ + G E + + AA
Sbjct: 390 KLLTSDGDTE-TQENAVTCILNLSIYEHNKELIMLAGAVTSIVLVLRAGSMEARENAAAT 448
Query: 301 LGDLALNSDVKVLVARTVG-SCLINIMKSGNMQAREAALKALNQISSCEPSAKVLIHAGI 359
L L+L + K+++ + L+++++ G+++ ++ A AL + + + + AGI
Sbjct: 449 LFSLSLADENKIIIGASGAIMALVDLLQYGSVRGKKDAATALFNLCIYQGNKGRAVRAGI 508
Query: 360 LPPLVKDLFTVGSNHLPMRLKEVSATILA 388
+ PLVK + T S+ R+ + + TIL+
Sbjct: 509 VKPLVK-MLTDSSSE---RMADEALTILS 533
Score = 145 (56.1 bits), Expect = 2.8e-17, Sum P(2) = 2.8e-17
Identities = 28/80 (35%), Positives = 48/80 (60%)
Query: 29 IYDAFVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTDLN 88
I + F+CP++ ++M+DP + GQT+ER I++W +C G CP TQ++L + L
Sbjct: 243 IPEDFLCPISLELMKDPAIVSTGQTYERSFIQRWI-DC---GNLS-CPKTQQKLENFTLT 297
Query: 89 PSIALRNTIEEWNARNEAAQ 108
P+ LR+ I +W ++ Q
Sbjct: 298 PNYVLRSLISQWCTKHNIEQ 317
Score = 129 (50.5 bits), Expect = 9.6e-15, Sum P(2) = 9.6e-15
Identities = 51/216 (23%), Positives = 100/216 (46%)
Query: 152 IPMIIDMLKSSSRKVRCTALETLRIVVEEDDDNKEILGQGDTVRTIVKFLSHELSREREE 211
I ++ L S S + R TA+ +R + + DN+ ++ + + +VK L+ + E +E
Sbjct: 343 IRALVCKLSSQSIEDRRTAVSEIRSLSKRSTDNRILIAEAGAIPVLVKLLTSDGDTETQE 402
Query: 212 -AVSLLYELSKSEALCEKIGSINGAILILVGMTSSKSENLLTVEKAEKTLANLEKCENNV 270
AV+ + LS E E I + GA+ +V + + S + E A TL +L + N
Sbjct: 403 NAVTCILNLSIYEHNKELI-MLAGAVTSIVLVLRAGS--MEARENAAATLFSLSLADENK 459
Query: 271 RQMAENGRLQPLLTQILEGPQETKLSLAAFLGDLALNSDVKVLVART-VGSCLINIMK-S 328
+ +G + L+ + G K A L +L + K R + L+ ++ S
Sbjct: 460 IIIGASGAIMALVDLLQYGSVRGKKDAATALFNLCIYQGNKGRAVRAGIVKPLVKMLTDS 519
Query: 329 GNMQAREAALKALNQISSCEPSAKVLIHAGILPPLV 364
+ + + AL L+ ++S + + ++ A +PPL+
Sbjct: 520 SSERMADEALTILSVLASNQVAKTAILRANAIPPLI 555
Score = 121 (47.7 bits), Expect = 6.5e-14, Sum P(2) = 6.5e-14
Identities = 61/249 (24%), Positives = 106/249 (42%)
Query: 120 SSES--DIMPALKYVQYFCQSSRSNKHVVHNSELIPMIIDMLKSSSRKVRCTALETLRIV 177
SS+S D A+ ++ + S N+ ++ + IP+++ +L S T +
Sbjct: 351 SSQSIEDRRTAVSEIRSLSKRSTDNRILIAEAGAIPVLVKLLTSDGDTETQENAVTCILN 410
Query: 178 VEEDDDNKEILGQGDTVRTIVKFLSHELSREREEAVSLLYELSKSEALCEKIGSINGAIL 237
+ + NKE++ V +IV L RE A + L+ LS ++ IG+ +GAI+
Sbjct: 411 LSIYEHNKELIMLAGAVTSIVLVLRAGSMEARENAAATLFSLSLADENKIIIGA-SGAIM 469
Query: 238 ILVGMTSSKSENLLTVEKAEKTLANLEKCENNVRQMAENGRLQPLLTQILEGPQETKLSL 297
LV + S + + A L NL + N + G ++PL+ + + E
Sbjct: 470 ALVDLLQYGS--VRGKKDAATALFNLCIYQGNKGRAVRAGIVKPLVKMLTDSSSERMADE 527
Query: 298 A-AFLGDLALNSDVKVLVARTVG-SCLINIMKSGNMQAREAALKALNQISSCEPSAKVLI 355
A L LA N K + R LI+ ++ + RE A L + C+ + LI
Sbjct: 528 ALTILSVLASNQVAKTAILRANAIPPLIDCLQKDQPRNRENAAAIL--LCLCKRDTEKLI 585
Query: 356 HAGILPPLV 364
G L +V
Sbjct: 586 SIGRLGAVV 594
Score = 70 (29.7 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 31/119 (26%), Positives = 51/119 (42%)
Query: 114 KSLNLGSSESDIMPALKYVQYFCQSSRSNKHVVHNSELIPMIIDMLKSSSRKVRCTALET 173
K L SSE AL + S++ K + + IP +ID L+ + R A
Sbjct: 514 KMLTDSSSERMADEALTILSVLA-SNQVAKTAILRANAIPPLIDCLQKDQPRNRENAAAI 572
Query: 174 LRIVVEEDDDNKEILGQGDTVRTIVKFLSHELSREREEAVSLLYELSKSEALCEKIGSI 232
L + + D + +G+ V +++ R + +A SLL L KS K+GS+
Sbjct: 573 LLCLCKRDTEKLISIGRLGAVVPLMELSRDGTERAKRKANSLLELLRKSS---RKLGSL 628
Score = 66 (28.3 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 48/227 (21%), Positives = 90/227 (39%)
Query: 573 LEGLLSVLARVTFVLSDEPDAIALCCEHNLAALFIELLQSNGLDKVQMVSATALENLSL- 631
+E + ++ + + D L E + ++LL S+G + Q + T + NLS+
Sbjct: 355 IEDRRTAVSEIRSLSKRSTDNRILIAEAGAIPVLVKLLTSDGDTETQENAVTCILNLSIY 414
Query: 632 -ESKNLTKLPELPPSGFCASIFPCFSKQPVITGLCRLHRGLCSLKETFCLLEGHAVEKLI 690
+K L L S + S + L SL + ++ G A ++
Sbjct: 415 EHNKELIMLAGAVTS--IVLVLRAGSMEARENAAATLFS--LSLADENKIIIG-ASGAIM 469
Query: 691 ALLDHTNEKVVEASLAALSTVIDDGVDIEQGVMVLCEAQGI-KPILDVLLEKRTENLQRR 749
AL+D V A + + + + I QG GI KP++ +L + +E +
Sbjct: 470 ALVDLLQYGSVRGKKDAATALFN--LCIYQGNKGRAVRAGIVKPLVKMLTDSSSERMADE 527
Query: 750 AVWVVERILRTDDIAYEVSGDPNVSTALVDAFQHADYRTRQIAERAL 796
A+ ++ +L ++ +A N L+D Q R R+ A L
Sbjct: 528 ALTILS-VLASNQVAKTAILRANAIPPLIDCLQKDQPRNRENAAAIL 573
Score = 55 (24.4 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 31/115 (26%), Positives = 51/115 (44%)
Query: 454 IKSSGATISLVQFVEAP-QNDLRLASIELIQNLSPHMGHELADALRGAVGQLGSLIRVIS 512
I +GA LV+ + + + + ++ I NLS + ++ L GAV + ++R S
Sbjct: 379 IAEAGAIPVLVKLLTSDGDTETQENAVTCILNLSIYEHNKELIMLAGAVTSIVLVLRAGS 438
Query: 513 ENVGISKEQAAAVGLLAELPERDLGLTRQMLDEGAFGLIFSRVKSIQLGETRGSR 567
++E AAA L L D + GA G I + V +Q G RG +
Sbjct: 439 ME---ARENAAAT--LFSLSLAD----ENKIIIGASGAIMALVDLLQYGSVRGKK 484
Score = 54 (24.1 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 20/80 (25%), Positives = 38/80 (47%)
Query: 322 LINIMKSGNMQAREAALKALNQISSCEPSAKVLI-HAGILPPLVKDLFTVGSNHLPMRLK 380
L+ + S +++ R A+ + +S ++LI AG +P LVK L + G +
Sbjct: 346 LVCKLSSQSIEDRRTAVSEIRSLSKRSTDNRILIAEAGAIPVLVKLLTSDGDTET----Q 401
Query: 381 EVSATILANVVNSGHDFDSI 400
E + T + N+ H+ + I
Sbjct: 402 ENAVTCILNLSIYEHNKELI 421
Score = 40 (19.1 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 12/57 (21%), Positives = 25/57 (43%)
Query: 745 NLQRRAVWVVERILRTDDIAYEVSGDPNVSTALVDAFQHADYRTRQIAERALKHIDK 801
N+++ ++ R +D ++SGD + ALV R+ A ++ + K
Sbjct: 314 NIEQPGGYMNGRTKNSDGSFRDLSGDMSAIRALVCKLSSQSIEDRRTAVSEIRSLSK 370
>UNIPROTKB|Q5VRH9 [details] [associations]
symbol:PUB12 "U-box domain-containing protein 12"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AP008212
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HOGENOM:HOG000238412 EMBL:AP002842 EMBL:AK067611 EMBL:AK071080
RefSeq:NP_001056535.2 UniGene:Os.11259 ProteinModelPortal:Q5VRH9
EnsemblPlants:LOC_Os06g01304.1 GeneID:4339839 KEGG:osa:4339839
Gramene:Q5VRH9 eggNOG:NOG242845 OMA:KTGSPRN ProtClustDB:CLSN2695872
Uniprot:Q5VRH9
Length = 611
Score = 245 (91.3 bits), Expect = 3.0e-17, P = 3.0e-17
Identities = 101/396 (25%), Positives = 185/396 (46%)
Query: 25 HIEPIY-DAFVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELR 83
H PI D F CP++ ++M+DPV + +GQT+ER I+KW ++G K CP TQ+ L
Sbjct: 223 HRSPIIPDEFRCPISLELMQDPVIVSSGQTYERSCIQKWL----DSGHK-TCPKTQQPLS 277
Query: 84 STDLNPSIALRNTIEEW---NA----RNEAAQLDM-ARKS-----------LN-LGSSES 123
T L P+ L++ I +W N +N+ D A KS +N L S
Sbjct: 278 HTSLTPNFVLKSLISQWCEANGIELPKNKQNSRDKKAAKSSDYDHAGLVSLMNRLRSGNQ 337
Query: 124 DIMPALK-YVQYFCQSSRSNKHVVHNSELIPMIIDMLKSSSRKVRCTALETLRIVVEEDD 182
D A ++ + + +N+ + + IP+++++L SS + + A+ L + + +
Sbjct: 338 DEQRAAAGEIRLLAKRNVNNRICIAEAGAIPLLVNLLSSSDPRTQEHAVTAL-LNLSIHE 396
Query: 183 DNKEILGQGDTVRTIVKFLSHELSREREEAVSLLYELSKSEALCEKIGSINGAILILVGM 242
+NK + + IV+ L RE A + L+ LS + IG+ GAI L+ +
Sbjct: 397 NNKASIVDSHAIPKIVEVLKTGSMETRENAAATLFSLSVVDENKVTIGAA-GAIPPLINL 455
Query: 243 TSSKSENLLTVEKAEKTLANLEKCENNVRQMAENGRLQPLLTQILEGPQETKLSLA-AFL 301
S + A + NL + N + + G + L+ +++ P + A + L
Sbjct: 456 LCDGSPR--GKKDAATAIFNLCIYQGNKVRAVKAGIVIHLMNFLVD-PTGGMIDEALSLL 512
Query: 302 GDLALNSDVKVLVARTVG-SCLINIMKSGNMQAREAALKALNQISSCEPSAKVLIHAGIL 360
LA N + K+++AR+ L+ ++K+G+ + RE A L + S + + A +
Sbjct: 513 SILAGNPEGKIVIARSEPIPPLVEVIKTGSPRNRENAAAILWLLCSADTEQTLAAKAAGV 572
Query: 361 PPLVKDLFTVGSNHLPMRLKEVSATILANVVNSGHD 396
+K+L G++ R K +++IL + + D
Sbjct: 573 EDALKELSETGTD----RAKRKASSILELMHQANED 604
>TAIR|locus:2017719 [details] [associations]
symbol:AT1G23030 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0010200 "response to
chitin" evidence=IEP] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AF000657
HOGENOM:HOG000238412 HSSP:Q8VZ40 ProtClustDB:CLSN2681864
EMBL:BT002518 EMBL:AK221923 IPI:IPI00532693 PIR:D86364
RefSeq:NP_173716.1 UniGene:At.41572 UniGene:At.74178
ProteinModelPortal:Q8GUG9 SMR:Q8GUG9 PaxDb:Q8GUG9 PRIDE:Q8GUG9
EnsemblPlants:AT1G23030.1 GeneID:838911 KEGG:ath:AT1G23030
TAIR:At1g23030 eggNOG:KOG0167 InParanoid:Q8GUG9 OMA:IDCGNLT
PhylomeDB:Q8GUG9 Genevestigator:Q8GUG9 Uniprot:Q8GUG9
Length = 612
Score = 240 (89.5 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 94/352 (26%), Positives = 165/352 (46%)
Query: 33 FVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTDLNPSIA 92
F+CP++ ++M+DPV + GQT+ER I++W +C G CP TQ++L + L P+
Sbjct: 245 FLCPVSLELMKDPVIVATGQTYERAYIQRWI-DC---GNL-TCPKTQQKLENFTLTPNYV 299
Query: 93 LRNTIEEW-------------NARNE-AAQLDMARKSLNLGSSES--DIMPALKYVQYFC 136
LR+ I W N R + + + + R + SS S D A+ ++
Sbjct: 300 LRSLISRWCAEHNIEQPAGYINGRTKNSGDMSVIRALVQRLSSRSTEDRRNAVSEIRSLS 359
Query: 137 QSSRSNKHVVHNSELIPMIIDMLKSSSRKVRCTALE-TLRIVVEEDDDNKEILGQGDTVR 195
+ S N+ ++ + IP+++++L S + A+ L + + E+ NKE++ V
Sbjct: 360 KRSTDNRILIAEAGAIPVLVNLLTSEDVATQENAITCVLNLSIYEN--NKELIMFAGAVT 417
Query: 196 TIVKFLSHELSREREEAVSLLYELSKSEALCEKIGSINGAILILVGMTSSKSENLLTVEK 255
+IV+ L RE A + L+ LS ++ IG +GAI LV + + + +
Sbjct: 418 SIVQVLRAGTMEARENAAATLFSLSLADENKIIIGG-SGAIPALVDLLENGTPR--GKKD 474
Query: 256 AEKTLANLEKCENNVRQMAENGRLQPLLTQILEGPQETKLSLA-AFLGDLALNSDVK--V 312
A L NL N + G + L+ + + + + A L LA N D K +
Sbjct: 475 AATALFNLCIYHGNKGRAVRAGIVTALVKMLSDSTRHRMVDEALTILSVLANNQDAKSAI 534
Query: 313 LVARTVGSCLINIMKSGNMQAREAALKALNQISSCEPSAKVLIHAGILPPLV 364
+ A T+ + LI I+++ + RE A L +S C+ + LI G L +V
Sbjct: 535 VKANTLPA-LIGILQTDQTRNRENAAAIL--LSLCKRDTEKLITIGRLGAVV 583
Score = 156 (60.0 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 53/206 (25%), Positives = 102/206 (49%)
Query: 189 GQGDTVRTIVKFLSHELSREREEAVSLLYELSKSEALCEKIGSINGAILILVGMTSSKSE 248
G +R +V+ LS + +R AVS + LSK + + GAI +LV + +S E
Sbjct: 328 GDMSVIRALVQRLSSRSTEDRRNAVSEIRSLSKRSTDNRILIAEAGAIPVLVNLLTS--E 385
Query: 249 NLLTVEKAEKTLANLEKCENNVRQMAENGRLQPLLTQILEGPQETKLSLAAFLGDLALNS 308
++ T E A + NL ENN + G + ++ + G E + + AA L L+L
Sbjct: 386 DVATQENAITCVLNLSIYENNKELIMFAGAVTSIVQVLRAGTMEARENAAATLFSLSLAD 445
Query: 309 DVKVLVARTVG-SCLINIMKSGNMQAREAALKALNQISSCEPSAKVLIHAGILPPLVKDL 367
+ K+++ + L++++++G + ++ A AL + + + AGI+ LVK +
Sbjct: 446 ENKIIIGGSGAIPALVDLLENGTPRGKKDAATALFNLCIYHGNKGRAVRAGIVTALVK-M 504
Query: 368 FTVGSNHLPMRLKEVSATILANVVNS 393
+ + H R+ + + TIL+ + N+
Sbjct: 505 LSDSTRH---RMVDEALTILSVLANN 527
>TAIR|locus:2045334 [details] [associations]
symbol:PUB4 "plant U-box 4" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019894 "kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 EMBL:CP002685 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 IPI:IPI00532127
RefSeq:NP_179895.6 UniGene:At.39339 ProteinModelPortal:F4ILG6
SMR:F4ILG6 PRIDE:F4ILG6 EnsemblPlants:AT2G23140.1 GeneID:816846
KEGG:ath:AT2G23140 OMA:WRRPSER Uniprot:F4ILG6
Length = 829
Score = 151 (58.2 bits), Expect = 8.6e-16, Sum P(2) = 8.6e-16
Identities = 61/246 (24%), Positives = 117/246 (47%)
Query: 152 IPMIIDMLKSSSRKVRCTALETLRIVVEEDDDNKEILGQGDTVRTIVKFLSHELSREREE 211
+ +++ LKSSS + A LR++ + + DN+ ++G + +V+ L S +E
Sbjct: 546 VKKLVEELKSSSLDTQRQATAELRLLAKHNMDNRIVIGNSGAIVLLVELLYSTDSATQEN 605
Query: 212 AVSLLYELSKSEALCEKIGSINGAILILVGMTSSKSENLLTVEKAEKTLANLEKCENNVR 271
AV+ L LS ++ + I GAI L+ + + S E + TL +L E N
Sbjct: 606 AVTALLNLSINDNNKKAIADA-GAIEPLIHVLENGSSE--AKENSAATLFSLSVIEENKI 662
Query: 272 QMAENGRLQPLLTQILEGPQETKLSLAAFLGDLALNSDVKVLVARTVGSC--LINIMKSG 329
++ ++G + PL+ + G K A L +L+++ + K ++ ++ G+ LI++M
Sbjct: 663 KIGQSGAIGPLVDLLGNGTPRGKKDAATALFNLSIHQENKAMIVQS-GAVRYLIDLMDPA 721
Query: 330 NMQAREAALKALNQISSCEPSAKVLIHAGILPPLVKDLFTVGSNHLPMRLKEVSATILAN 389
+ A+ L +++ + G +P LV ++ +GS R KE +A L
Sbjct: 722 AGMV-DKAVAVLANLATIPEGRNAIGQEGGIPLLV-EVVELGS----ARGKENAAAALLQ 775
Query: 390 V-VNSG 394
+ NSG
Sbjct: 776 LSTNSG 781
Score = 142 (55.0 bits), Expect = 8.0e-15, Sum P(2) = 8.0e-15
Identities = 52/197 (26%), Positives = 103/197 (52%)
Query: 175 RIVVEEDDDNKEILGQGDT-VRTIVKFL-SHELSREREEAVSLLYELSKSEALCEKIGSI 232
RIV ++ + L + +T V+ +V+ L S L +R+ A + L L+K +
Sbjct: 526 RIVSAPSNETRRDLSEVETQVKKLVEELKSSSLDTQRQ-ATAELRLLAKHNMDNRIVIGN 584
Query: 233 NGAILILVGMTSSKSENLLTVEKAEKTLANLEKCENNVRQMAENGRLQPLLTQILEGPQE 292
+GAI++LV + S T E A L NL +NN + +A+ G ++PL+ + G E
Sbjct: 585 SGAIVLLVELLYSTDS--ATQENAVTALLNLSINDNNKKAIADAGAIEPLIHVLENGSSE 642
Query: 293 TKLSLAAFLGDLALNSDVKVLVART--VGSCLINIMKSGNMQAREAALKALNQISSCEPS 350
K + AA L L++ + K+ + ++ +G L++++ +G + ++ A AL +S + +
Sbjct: 643 AKENSAATLFSLSVIEENKIKIGQSGAIGP-LVDLLGNGTPRGKKDAATALFNLSIHQEN 701
Query: 351 AKVLIHAGILPPLVKDL 367
+++ +G + L+ DL
Sbjct: 702 KAMIVQSGAVRYLI-DL 717
Score = 136 (52.9 bits), Expect = 8.6e-16, Sum P(2) = 8.6e-16
Identities = 32/86 (37%), Positives = 49/86 (56%)
Query: 33 FVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTDLNPSIA 92
F CPL+ +VM DPV + +GQT+E+ I++W + G K VCP T++ L T L P+
Sbjct: 237 FFCPLSLEVMTDPVIVSSGQTYEKAFIKRWI----DLGLK-VCPKTRQTLTHTTLIPNYT 291
Query: 93 LRNTIEEWNARNEAAQLDMARKSLNL 118
++ I W N+ +L KS +L
Sbjct: 292 VKALIANWCETNDV-KLPDPNKSTSL 316
Score = 132 (51.5 bits), Expect = 9.2e-14, Sum P(2) = 9.2e-14
Identities = 52/205 (25%), Positives = 97/205 (47%)
Query: 141 SNKHVVHNSELIPMIIDMLKSSSRKVRCTALETLRIVVEEDDDNKEILGQGDTVRTIVKF 200
+NK + ++ I +I +L++ S + + + TL + ++NK +GQ + +V
Sbjct: 618 NNKKAIADAGAIEPLIHVLENGSSEAKENSAATL-FSLSVIEENKIKIGQSGAIGPLVDL 676
Query: 201 LSHELSREREEAVSLLYELSKSEALCEKIGSINGAILILVGMTSSKSENLLTVEKAEKTL 260
L + R +++A + L+ LS + I +GA+ L+ + + V+KA L
Sbjct: 677 LGNGTPRGKKDAATALFNLSIHQENKAMIVQ-SGAVRYLIDLMDPAAG---MVDKAVAVL 732
Query: 261 ANLEKCENNVRQMAENGRLQPLLTQILE-GPQETKLSLAAFLGDLALNSDVKVLVARTVG 319
ANL + + G + PLL +++E G K + AA L L+ NS + G
Sbjct: 733 ANLATIPEGRNAIGQEGGI-PLLVEVVELGSARGKENAAAALLQLSTNSGRFCNMVLQEG 791
Query: 320 SC--LINIMKSGNMQAREAALKALN 342
+ L+ + +SG +ARE A L+
Sbjct: 792 AVPPLVALSQSGTPRAREKAQALLS 816
Score = 65 (27.9 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 30/125 (24%), Positives = 58/125 (46%)
Query: 140 RSNKHVVHNSELIPMIIDMLKSSSRKV-RCTA-LETLRIVVEEDDDNKEILGQGDTVRTI 197
+ NK ++ S + +ID++ ++ V + A L L + E + +GQ + +
Sbjct: 699 QENKAMIVQSGAVRYLIDLMDPAAGMVDKAVAVLANLATIPE----GRNAIGQEGGIPLL 754
Query: 198 VKFLSHELSREREEAVSLLYELS-KSEALCEKIGSINGAILILVGMTSSKSENLLTVEKA 256
V+ + +R +E A + L +LS S C + GA+ LV ++ S + EKA
Sbjct: 755 VEVVELGSARGKENAAAALLQLSTNSGRFCNMVLQ-EGAVPPLVALSQSGTPRAR--EKA 811
Query: 257 EKTLA 261
+ L+
Sbjct: 812 QALLS 816
Score = 60 (26.2 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 38/169 (22%), Positives = 70/169 (41%)
Query: 399 SITVGPDNQTLVSE-DIVHNLLHLISNTGPTIECKLLQXXXXXXXXXXXXXXXXXAIKSS 457
++++ +N+ +++ + L+H++ N G + E K + I S
Sbjct: 612 NLSINDNNKKAIADAGAIEPLIHVLEN-GSS-EAK--ENSAATLFSLSVIEENKIKIGQS 667
Query: 458 GATISLVQFV-EAPQNDLRLASIELIQNLSPHMGHELADALRGAVGQLGSLIRVISENVG 516
GA LV + + A+ L NLS H ++ GAV L I ++ G
Sbjct: 668 GAIGPLVDLLGNGTPRGKKDAATALF-NLSIHQENKAMIVQSGAVRYL---IDLMDPAAG 723
Query: 517 ISKEQAAAVGLLAELPERDLGLTRQMLDEGAFGLIFSRVKSIQLGETRG 565
+ + A + LA +PE + + EG L+ V+ ++LG RG
Sbjct: 724 MVDKAVAVLANLATIPEGRNAIGQ----EGGIPLL---VEVVELGSARG 765
Score = 57 (25.1 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 20/71 (28%), Positives = 37/71 (52%)
Query: 454 IKSSGATISLVQFVEAPQNDLRLASIELIQNLSPHMGHELADALRGAVGQLGSLIRVISE 513
I +SGA + LV+ + + + + ++ + NLS + ++ A A GA+ L I V+
Sbjct: 582 IGNSGAIVLLVELLYSTDSATQENAVTALLNLSINDNNKKAIADAGAIEPL---IHVLEN 638
Query: 514 NVGISKEQAAA 524
+KE +AA
Sbjct: 639 GSSEAKENSAA 649
Score = 57 (25.1 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 44/179 (24%), Positives = 72/179 (40%)
Query: 465 QFVEAPQNDLR--LASIEL-IQNLSPHMGHELADALRGAVGQLGSLIRVISENVGISKEQ 521
+ V AP N+ R L+ +E ++ L + D R A +L L + +N I
Sbjct: 526 RIVSAPSNETRRDLSEVETQVKKLVEELKSSSLDTQRQATAELRLLAKHNMDN-RIVIGN 584
Query: 522 AAAVGLLAELPERDLGLTRQMLDEGAFGLIFSRVKSIQLGETRGSRFVTPFLEGLLSVL- 580
+ A+ LL EL T++ L + + + + LE S
Sbjct: 585 SGAIVLLVELLYSTDSATQENAVTALLNLSINDNNKKAIADAGAIEPLIHVLENGSSEAK 644
Query: 581 ---ARVTFVLSD-EPDAIALCCEHNLAALFIELLQSNGLDKVQMVSATALENLSLESKN 635
A F LS E + I + + L ++LL NG + + +ATAL NLS+ +N
Sbjct: 645 ENSAATLFSLSVIEENKIKIGQSGAIGPL-VDLL-GNGTPRGKKDAATALFNLSIHQEN 701
Score = 51 (23.0 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 16/59 (27%), Positives = 34/59 (57%)
Query: 680 LLEGHAVEKLIALLDHTNEKVVEASLAALSTVIDDGVDIEQGVMVLCEAQGIKPILDVL 738
+ + A+E LI +L++ + + E S A L ++ V IE+ + + ++ I P++D+L
Sbjct: 623 IADAGAIEPLIHVLENGSSEAKENSAATLFSL---SV-IEENKIKIGQSGAIGPLVDLL 677
Score = 48 (22.0 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 48/194 (24%), Positives = 83/194 (42%)
Query: 607 IELLQSNGLDKVQMVSATALENLSLESKNLTKLPELPPSGFCASIFPCFS---KQPVITG 663
I +L+ NG + + SA L +LS+ +N K+ + G + + K+ T
Sbjct: 633 IHVLE-NGSSEAKENSAATLFSLSVIEENKIKIGQSGAIGPLVDLLGNGTPRGKKDAATA 691
Query: 664 LCRLHRGLCSLKETFCLLEGHAVEKLIALLDHTN---EKVVEASLAALSTVID--DGVDI 718
L L + +++ AV LI L+D +K V A LA L+T+ + + +
Sbjct: 692 LFNLS---IHQENKAMIVQSGAVRYLIDLMDPAAGMVDKAV-AVLANLATIPEGRNAIGQ 747
Query: 719 EQGVMVLCE------AQGIKPILDVLLEKRTENLQRRAVWVVERILRTDDIAYEVSGDPN 772
E G+ +L E A+G + LL+ T N R V++ +A SG P
Sbjct: 748 EGGIPLLVEVVELGSARGKENAAAALLQLST-NSGRFCNMVLQEGAVPPLVALSQSGTPR 806
Query: 773 V---STALVDAFQH 783
+ AL+ F++
Sbjct: 807 AREKAQALLSYFRN 820
>TAIR|locus:2082682 [details] [associations]
symbol:PUB14 "plant U-box 14" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA;ISS] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0070696 "transmembrane receptor protein
serine/threonine kinase binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0046777 "protein autophosphorylation"
evidence=RCA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 EMBL:AL049655
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HOGENOM:HOG000238412
eggNOG:NOG242845 OMA:KTGSPRN EMBL:AY065279 EMBL:AY096530
IPI:IPI00539579 PIR:T06735 RefSeq:NP_191045.2 UniGene:At.28098
PDB:1T1H PDBsum:1T1H ProteinModelPortal:Q8VZ40 SMR:Q8VZ40
IntAct:Q8VZ40 STRING:Q8VZ40 PaxDb:Q8VZ40 PRIDE:Q8VZ40
EnsemblPlants:AT3G54850.1 GeneID:824650 KEGG:ath:AT3G54850
TAIR:At3g54850 InParanoid:Q8VZ40 PhylomeDB:Q8VZ40
ProtClustDB:CLSN2690608 EvolutionaryTrace:Q8VZ40
Genevestigator:Q8VZ40 GermOnline:AT3G54850 Uniprot:Q8VZ40
Length = 632
Score = 148 (57.2 bits), Expect = 4.6e-15, Sum P(2) = 4.6e-15
Identities = 36/104 (34%), Positives = 57/104 (54%)
Query: 25 HIEPIY-DAFVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELR 83
H P+ + F CP++ ++M+DPV + GQT+ER +I+KW + G K CP +Q+ L
Sbjct: 243 HRSPVIPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWL----DAGHK-TCPKSQETLL 297
Query: 84 STDLNPSIALRNTIEEWNARN--EAAQLDMARKSLNLG-SSESD 124
L P+ L++ I W N E Q + ++ +G SS SD
Sbjct: 298 HAGLTPNYVLKSLIALWCESNGIELPQNQGSCRTTKIGGSSSSD 341
Score = 129 (50.5 bits), Expect = 4.6e-15, Sum P(2) = 4.6e-15
Identities = 50/214 (23%), Positives = 98/214 (45%)
Query: 139 SRSNKHVVHNSELIPMIIDMLKSSSRKVRCTALETLRIVVEEDDDNKEILGQGDTVRTIV 198
+ NK + ++ I I+++LK+ S + R A TL + D+NK +G ++ ++
Sbjct: 417 NEGNKGAIVDAGAITDIVEVLKNGSMEARENAAATL-FSLSVIDENKVAIGAAGAIQALI 475
Query: 199 KFLSHELSREREEAVSLLYELSKSEALCEKIGSINGAILI-LVGMTSSKSENLLTVEKAE 257
L R +++A + ++ L + K ++ G I+ L + + V++A
Sbjct: 476 SLLEEGTRRGKKDAATAIFNLCIYQG--NKSRAVKGGIVDPLTRLLKDAGGGM--VDEAL 531
Query: 258 KTLANLEKCENNVRQMAENGRLQPLLTQILE-GPQETKLSLAAFLGDLALNSDVKVLVAR 316
LA L + +AE + P+L +I+ G + + AA L L + + ++ VAR
Sbjct: 532 AILAILSTNQEGKTAIAEAESI-PVLVEIIRTGSPRNRENAAAILWYLCIGNIERLNVAR 590
Query: 317 TVGS--CLINIMKSGNMQAREAALKALNQISSCE 348
VG+ L + ++G +A+ A L I E
Sbjct: 591 EVGADVALKELTENGTDRAKRKAASLLELIQQTE 624
Score = 124 (48.7 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 55/235 (23%), Positives = 108/235 (45%)
Query: 155 IIDMLKSSSRKVRCTALETLRIVVEEDDDNKEILGQGDTVRTIVKFLSHELSREREEAVS 214
+++ L + + + + A LR++ + + DN+ + + + +V+ LS R +E +V+
Sbjct: 350 LLEKLANGTTEQQRAAAGELRLLAKRNVDNRVCIAEAGAIPLLVELLSSPDPRTQEHSVT 409
Query: 215 LLYELSKSEALCEKIGSIN-GAILILVGMTSSKSENLLTVEKAEKTLANLEKCENNVRQM 273
L LS +E K ++ GAI +V + K+ ++ E A TL +L + N +
Sbjct: 410 ALLNLSINEG--NKGAIVDAGAITDIVEVL--KNGSMEARENAAATLFSLSVIDENKVAI 465
Query: 274 AENGRLQPLLTQILEGPQETKLSLAAFLGDLALNSDVKVLVART-VGSCLINIMKSGNMQ 332
G +Q L++ + EG + K A + +L + K + + L ++K
Sbjct: 466 GAAGAIQALISLLEEGTRRGKKDAATAIFNLCIYQGNKSRAVKGGIVDPLTRLLKDAGGG 525
Query: 333 AREAALKALNQISSCEPSAKVLIHAGILPPLVKDLFTVGSNHLPMRLKEVSATIL 387
+ AL L +S+ + + A +P LV ++ GS P R +E +A IL
Sbjct: 526 MVDEALAILAILSTNQEGKTAIAEAESIPVLV-EIIRTGS---P-RNRENAAAIL 575
Score = 50 (22.7 bits), Expect = 6.7e-07, Sum P(2) = 6.7e-07
Identities = 14/88 (15%), Positives = 42/88 (47%)
Query: 138 SSRSNKHVVHNSELIPMIIDMLKSSSRKVRCTALETLRIVVEEDDDNKEILGQGDTVRTI 197
+++ K + +E IP++++++++ S + R A L + + + + + +
Sbjct: 539 TNQEGKTAIAEAESIPVLVEIIRTGSPRNRENAAAILWYLCIGNIERLNVAREVGADVAL 598
Query: 198 VKFLSHELSREREEAVSLLYELSKSEAL 225
+ + R + +A SLL + ++E +
Sbjct: 599 KELTENGTDRAKRKAASLLELIQQTEGV 626
Score = 48 (22.0 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 22/87 (25%), Positives = 43/87 (49%)
Query: 453 AIKSSGATISLVQFVEAPQNDLRLASIELIQNLSPHMGHELADALRGAVGQLGSLIRVIS 512
AI ++GA +L+ +E + + I NL + G++ + A++G + + L R++
Sbjct: 464 AIGAAGAIQALISLLEEGTRRGKKDAATAIFNLCIYQGNK-SRAVKGGI--VDPLTRLLK 520
Query: 513 ENVGISKEQAAAVGLLAELPERDLGLT 539
+ G ++A A+ LA L G T
Sbjct: 521 DAGGGMVDEALAI--LAILSTNQEGKT 545
Score = 45 (20.9 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 64/293 (21%), Positives = 119/293 (40%)
Query: 482 IQNLSPHMGHELADALRGAVGQLGSLI-RVISENVGISKEQAAAVGLLAELPERDLGLTR 540
+ +L + + + R A G+L L R + V I+ +A A+ LL EL T+
Sbjct: 347 VLSLLEKLANGTTEQQRAAAGELRLLAKRNVDNRVCIA--EAGAIPLLVELLSSPDPRTQ 404
Query: 541 QMLDEGAFGLIFSRVKSIQLGETRGSRFVTPFLEGLL--SVLAR-----VTFVLS--DEP 591
+ L+ + G + +T +E L S+ AR F LS DE
Sbjct: 405 E---HSVTALLNLSINEGNKGAIVDAGAITDIVEVLKNGSMEARENAAATLFSLSVIDE- 460
Query: 592 DAIALCCEHNLAALFIELLQSNGLDKVQMVSATALENLSLESKNLTKLPELPPSGFCASI 651
+ +A+ + AL I LL+ G + + +ATA+ NL + N ++ + +
Sbjct: 461 NKVAIGAAGAIQAL-ISLLEE-GTRRGKKDAATAIFNLCIYQGNKSRAVKGGIVDPLTRL 518
Query: 652 FPCFSKQPVITGLCRLHRGLCSLKETFCLLEGHAVEKLIALLDHTNEKVVEASLAALSTV 711
V L L + + + E ++ L+ ++ T + AA+
Sbjct: 519 LKDAGGGMVDEALAILAILSTNQEGKTAIAEAESIPVLVEII-RTGSPRNRENAAAILWY 577
Query: 712 IDDGVDIEQGVMVLCEAQGIKPILDVLLEKRTENLQRRAVWVVERILRTDDIA 764
+ G +IE+ + + G L L E T+ +R+A ++E I +T+ +A
Sbjct: 578 LCIG-NIER--LNVAREVGADVALKELTENGTDRAKRKAASLLELIQQTEGVA 627
>UNIPROTKB|Q0IMG9 [details] [associations]
symbol:SPL11 "E3 ubiquitin-protein ligase SPL11"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0031348 "negative regulation of
defense response" evidence=IMP] [GO:0043069 "negative regulation of
programmed cell death" evidence=IMP] [GO:0048586 "regulation of
long-day photoperiodism, flowering" evidence=IMP]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
GO:GO:0006952 SUPFAM:SSF48371 GO:GO:0031348 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0043069 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0009908 GO:GO:0004842 GO:GO:0000151
EMBL:DP000011 EMBL:AP008218 GO:GO:0048586 eggNOG:NOG242845
EMBL:AY652589 EMBL:AY652590 EMBL:AK105835 RefSeq:NP_001067077.2
UniGene:Os.21174 ProteinModelPortal:Q0IMG9 SMR:Q0IMG9
GeneID:4352575 KEGG:dosa:Os03t0275900-01 KEGG:dosa:Os12t0570000-01
KEGG:osa:4352575 Gramene:Q0IMG9 Uniprot:Q0IMG9
Length = 694
Score = 234 (87.4 bits), Expect = 5.9e-15, Sum P(2) = 5.9e-15
Identities = 95/373 (25%), Positives = 167/373 (44%)
Query: 29 IYDAFVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTDLN 88
I D F CP++ ++M+DPV + GQT+ER IEKW +G CP TQ+++ ++ L
Sbjct: 273 IPDEFRCPISLELMKDPVIVSTGQTYERACIEKWIA----SGHH-TCPTTQQKMSTSALT 327
Query: 89 PSIALRNTIEEWNARN---------------------EAAQLDMARKSLNLGSSESDIMP 127
P+ LR+ I +W N E A +D L +E
Sbjct: 328 PNYVLRSLISQWCETNGMEPPKRSTQPNKPTPACSSSERANIDALLSKLCSPDTEEQRSA 387
Query: 128 ALKYVQYFCQSSRSNKHVVHNSELIPMIIDMLKSSSRKVRCTALETLRIVVEEDDDNKEI 187
A + ++ + + +N+ + + IP+++ +L SS + + A+ L + +D+ I
Sbjct: 388 AAE-LRLLAKRNANNRICIAEAGAIPLLLSLLSSSDLRTQEHAVTALLNLSIHEDNKASI 446
Query: 188 LGQGDTVRTIVKFLSHELSREREEAVSLLYELSKSEALCEKIGSING--AILILVGMTSS 245
+ G V +IV L + RE A + L+ LS + IG + A+++L+G S
Sbjct: 447 ISSG-AVPSIVHVLKNGSMEARENAAATLFSLSVIDEYKVTIGGMGAIPALVVLLGEGSQ 505
Query: 246 KSENLLTVEKAEKTLANLEKCENNVRQMAENGRLQPLLTQILEGPQETKLSLA-AFLGDL 304
+ + + A L NL + N + G L PL+ ++ P + A A L L
Sbjct: 506 RGK-----KDAAAALFNLCIYQGNKGRAIRAG-LVPLIMGLVTNPTGALMDEAMAILSIL 559
Query: 305 ALNSDVKVLV-ARTVGSCLINIMKSGNMQAREAALKALNQISSCEPSAKVLIHA---GIL 360
+ + + K + A L+ ++ SG + RE A + + S E L A GI+
Sbjct: 560 SSHPEGKAAIGAAEPVPVLVEMIGSGTPRNRENAAAVMLHLCSGEHHLVHLARAQECGIM 619
Query: 361 PPLVKDLFTVGSN 373
PL ++L G++
Sbjct: 620 VPL-RELALNGTD 631
Score = 39 (18.8 bits), Expect = 5.9e-15, Sum P(2) = 5.9e-15
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 719 EQGVMVLCEAQ--GIKPILDVLLEKRTENLQRRAVWVVERILR 759
E ++ L AQ GI L L T+ +R+AV ++ER+ R
Sbjct: 604 EHHLVHLARAQECGIMVPLRELALNGTDRGKRKAVQLLERMSR 646
>TAIR|locus:2158252 [details] [associations]
symbol:AT5G67340 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0000165
"MAPK cascade" evidence=RCA] [GO:0006499 "N-terminal protein
myristoylation" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0006865 "amino acid transport"
evidence=RCA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0006984 "ER-nucleus signaling pathway" evidence=RCA]
[GO:0007154 "cell communication" evidence=RCA] [GO:0009409
"response to cold" evidence=RCA] [GO:0009414 "response to water
deprivation" evidence=RCA] [GO:0009611 "response to wounding"
evidence=RCA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0009697 "salicylic acid biosynthetic process"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009862 "systemic acquired resistance,
salicylic acid mediated signaling pathway" evidence=RCA]
[GO:0009867 "jasmonic acid mediated signaling pathway"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=RCA] [GO:0031348 "negative regulation of
defense response" evidence=RCA] [GO:0034976 "response to
endoplasmic reticulum stress" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0050832 "defense response to fungus" evidence=RCA]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AB007645 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:BT015818 EMBL:BT020206 EMBL:AK229487
IPI:IPI00537014 RefSeq:NP_201535.3 UniGene:At.28815
ProteinModelPortal:Q5XEZ8 SMR:Q5XEZ8 STRING:Q5XEZ8 PaxDb:Q5XEZ8
PRIDE:Q5XEZ8 EnsemblPlants:AT5G67340.1 GeneID:836869
KEGG:ath:AT5G67340 TAIR:At5g67340 eggNOG:NOG269447
InParanoid:Q5XEZ8 OMA:LASWCET PhylomeDB:Q5XEZ8
ProtClustDB:CLSN2681130 Genevestigator:Q5XEZ8 Uniprot:Q5XEZ8
Length = 707
Score = 175 (66.7 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 65/281 (23%), Positives = 132/281 (46%)
Query: 88 NPSIALRNTIEEWNARNEAAQLDMARKSLNLGSSESDIM-PALKYVQYFCQSSRSNKHVV 146
+P I + T+ E + + + + ++ + +L SS D A ++ ++S N+ V+
Sbjct: 402 HPGI-IPATVRETGS-SSSIETEVKKLIDDLKSSSLDTQREATARIRILARNSTDNRIVI 459
Query: 147 HNSELIPMIIDMLKSSSRKVRCTALETLRIVVEEDDDNKEILGQGDTVRTIVKFL-SHEL 205
E IP ++ +L S+ +++ A+ L + + +D+NK ++ + + ++ L + L
Sbjct: 460 ARCEAIPSLVSLLYSTDERIQADAVTCL-LNLSINDNNKSLIAESGAIVPLIHVLKTGYL 518
Query: 206 SREREEAVSLLYELSKSEALCEKIGSINGAILILVGMTSSKSENLLTVEKAEKTLANLEK 265
+ + + L+ LS E +IG GAI LV + S S L + A L NL
Sbjct: 519 EEAKANSAATLFSLSVIEEYKTEIGEA-GAIEPLVDLLGSGS--LSGKKDAATALFNLSI 575
Query: 266 CENNVRQMAENGRLQPLLTQILEGPQETKLSLAAFLGDLALNSDVKVLVARTVG-SCLIN 324
N ++ E G ++ L ++++ L +LA + K+ + G L+
Sbjct: 576 HHENKTKVIEAGAVR-YLVELMDPAFGMVEKAVVVLANLATVREGKIAIGEEGGIPVLVE 634
Query: 325 IMKSGNMQAREAALKALNQISSCEPS-AKVLIHAGILPPLV 364
+++ G+ + +E A AL Q+ + P +I G++PPLV
Sbjct: 635 VVELGSARGKENATAALLQLCTHSPKFCNNVIREGVIPPLV 675
Score = 129 (50.5 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 55/225 (24%), Positives = 102/225 (45%)
Query: 152 IPMIIDMLKSSSRKVRCTALETLRIVVEEDDDNKEILGQGDTVRTIVKFLSHELSREREE 211
+ +ID LKSSS + A +RI+ DN+ ++ + + + ++V L R + +
Sbjct: 423 VKKLIDDLKSSSLDTQREATARIRILARNSTDNRIVIARCEAIPSLVSLLYSTDERIQAD 482
Query: 212 AVSLLYELSKSEALCEKIGSINGAILILVGMTSSKSENLLTVEKAEK--TLANLEKCENN 269
AV+ L LS ++ I +GAI+ L+ + + L KA TL +L E
Sbjct: 483 AVTCLLNLSINDNNKSLIAE-SGAIVPLIHVLKT---GYLEEAKANSAATLFSLSVIEEY 538
Query: 270 VRQMAENGRLQPLLTQILEGPQETKLSLAAFLGDLALNSD--VKVLVARTVGSCLINIMK 327
++ E G ++PL+ + G K A L +L+++ + KV+ A V L+ +M
Sbjct: 539 KTEIGEAGAIEPLVDLLGSGSLSGKKDAATALFNLSIHHENKTKVIEAGAV-RYLVELMD 597
Query: 328 SGNMQAREAALKALNQISSCEPSAKVLIHAGILPPLVKDLFTVGS 372
+A + N + E + GI P++ ++ +GS
Sbjct: 598 PAFGMVEKAVVVLANLATVREGKIAIGEEGGI--PVLVEVVELGS 640
Score = 125 (49.1 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 40/112 (35%), Positives = 54/112 (48%)
Query: 33 FVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTDLNPSIA 92
F C L+ ++M DPV + +GQTFER I+KW + G VCP T++ L T L P+
Sbjct: 244 FRCSLSLELMTDPVIVASGQTFERVFIQKWI----DMGLM-VCPKTRQALSHTTLTPNFI 298
Query: 93 LRNTIEEWNARNEAAQLDMARKSLNLGSSESDIMPALKYVQYFCQSSRSNKH 144
+R + W N D L L S S+ P L V+ SS N H
Sbjct: 299 VRAFLASWCETNNVYPPD----PLELIHS-SEPFPLL--VESVRASSSENGH 343
Score = 80 (33.2 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 41/149 (27%), Positives = 70/149 (46%)
Query: 246 KSENLLTVEKAEKTLANLEKCENNVRQMAENGRLQPLLTQILEGPQET-KLSLAAFLGDL 304
KS +L T +A + L + + R + P L +L E + L +L
Sbjct: 431 KSSSLDTQREATARIRILARNSTDNRIVIARCEAIPSLVSLLYSTDERIQADAVTCLLNL 490
Query: 305 ALNSDVKVLVARTVGSC--LINIMKSGNMQAREAALKA-LNQISSCEPSAKVLIHAGILP 361
++N + K L+A + G+ LI+++K+G ++ +A A L +S E + AG +
Sbjct: 491 SINDNNKSLIAES-GAIVPLIHVLKTGYLEEAKANSAATLFSLSVIEEYKTEIGEAGAIE 549
Query: 362 PLVKDLFTVGSNHLPMRLKEVSATILANV 390
PLV DL GS + K+ +AT L N+
Sbjct: 550 PLV-DLLGSGS----LSGKKDAATALFNL 573
Score = 55 (24.4 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 28/107 (26%), Positives = 49/107 (45%)
Query: 607 IELLQSNGLDKVQMVSATALENLSLESKNLTKLPELPPSGFCASIF-PCFSKQP----VI 661
++LL S L + +ATAL NLS+ +N TK+ E + + P F V+
Sbjct: 552 VDLLGSGSLSG-KKDAATALFNLSIHHENKTKVIEAGAVRYLVELMDPAFGMVEKAVVVL 610
Query: 662 TGLCRLHRGLCSLKETFCLLEGHAVEKLIALLDHTNEKVVEASLAAL 708
L + G ++ E EG + L+ +++ + + E + AAL
Sbjct: 611 ANLATVREGKIAIGE-----EG-GIPVLVEVVELGSARGKENATAAL 651
Score = 54 (24.1 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 32/143 (22%), Positives = 64/143 (44%)
Query: 660 VITGLCRLHRGLCSLK-ETFCLLEGHAVEKLIALLDHTNEKVVEASLAALSTVIDDGVDI 718
++ C L SL T ++ AV L+ L + N K + A A+ +I +
Sbjct: 457 IVIARCEAIPSLVSLLYSTDERIQADAVTCLLNLSINDNNKSLIAESGAIVPLIHV---L 513
Query: 719 EQGVMVLCEAQGIKPI--LDVLLEKRTENLQRRAVWVVERILRTDDIAYEVSGDPNVSTA 776
+ G + +A + L V+ E +TE + A+ + +L + + SG + +TA
Sbjct: 514 KTGYLEEAKANSAATLFSLSVIEEYKTEIGEAGAIEPLVDLLGSGSL----SGKKDAATA 569
Query: 777 LVDAFQHADYRTRQIAERALKHI 799
L + H + +T+ I A++++
Sbjct: 570 LFNLSIHHENKTKVIEAGAVRYL 592
Score = 54 (24.1 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 48/180 (26%), Positives = 78/180 (43%)
Query: 479 IELIQNLSPHMGH-ELADA--LRGAVGQLGSLIRVISENVGISKEQ--AAAVGLLA---- 529
+E ++ S GH E DA LR + S ++SE V +K AAA L
Sbjct: 331 VESVRASSSENGHSESLDAEELRQVFSRSASAPGIVSEVVCKTKRNNNAAADRSLTRSNT 390
Query: 530 --ELPE----RDLGLTRQMLDE-GAFGLIFSRVKSIQLGETRGSRFVTPF-LEGLLSVLA 581
+ PE R G+ + E G+ I + VK + + + + S T + +LA
Sbjct: 391 PWKFPEERHWRHPGIIPATVRETGSSSSIETEVKKL-IDDLKSSSLDTQREATARIRILA 449
Query: 582 RVTFVLSDEPDAIALCCEHNLAALFIELLQSNGLDKVQMVSATALENLSLESKNLTKLPE 641
R + +D IA C + +L + LL S +++Q + T L NLS+ N + + E
Sbjct: 450 RNS---TDNRIVIARC--EAIPSL-VSLLYSTD-ERIQADAVTCLLNLSINDNNKSLIAE 502
>TAIR|locus:2079706 [details] [associations]
symbol:PUB9 "plant U-box 9" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] [GO:0071215 "cellular response to abscisic
acid stimulus" evidence=IMP] [GO:0046777 "protein
autophosphorylation" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005886 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 GO:GO:0009738
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0071215 GO:GO:0004842 GO:GO:0000151
EMBL:AC009853 HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:AY075636
IPI:IPI00538175 RefSeq:NP_566304.1 UniGene:At.21635
ProteinModelPortal:Q9SRT0 SMR:Q9SRT0 STRING:Q9SRT0 PaxDb:Q9SRT0
PRIDE:Q9SRT0 EnsemblPlants:AT3G07360.1 GeneID:819924
KEGG:ath:AT3G07360 TAIR:At3g07360 eggNOG:NOG271821
InParanoid:Q9SRT0 OMA:LIREMIS PhylomeDB:Q9SRT0
ProtClustDB:CLSN2917129 Genevestigator:Q9SRT0 Uniprot:Q9SRT0
Length = 460
Score = 150 (57.9 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 31 DAFVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTDLNPS 90
+ F CPL+ ++MRDPV L +GQT+++ I+KW +G + CP TQ+ L T L P+
Sbjct: 76 EEFRCPLSNELMRDPVVLASGQTYDKLFIQKWLS----SGNR-TCPKTQQVLPHTALTPN 130
Query: 91 IALRNTIEEWNARN 104
+ +R I +W +N
Sbjct: 131 LLIREMISKWCKKN 144
Score = 95 (38.5 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 47/150 (31%), Positives = 75/150 (50%)
Query: 247 SENLLTVEKAEKTLANLEKCENNVRQM-AEN-GRLQPLLTQILEG--PQETKLS--LAAF 300
S NL + A K L L + R + E+ + L+ +L G P E KL +
Sbjct: 180 SSNLQDQKSAAKELRLLTRKGTEFRALFGESPDEITRLVNPLLHGSNPDE-KLQEDVVTT 238
Query: 301 LGDLALNSDV-KVLVART--VGSCLINIMKSGNMQAREAALKALNQISSCEPSAKVLI-H 356
L +++++ D K LV V LI+ ++ G + R A A+ +S+ + S KVLI
Sbjct: 239 LLNISIHDDSNKKLVCENPNVIPLLIDALRRGTVATRSNAAAAIFTLSALD-SNKVLIGK 297
Query: 357 AGILPPLVKDLFTVGSNHLPMRLKEVSATI 386
+GIL PL+ DL G+ P+ +K+V+A I
Sbjct: 298 SGILKPLI-DLLEEGN---PLAIKDVAAAI 323
Score = 78 (32.5 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 33/144 (22%), Positives = 63/144 (43%)
Query: 141 SNKHVV-HNSELIPMIIDMLKSSSRKVRCTALETLRIVVEEDDDNKEILGQGDTVRTIVK 199
SNK +V N +IP++ID L+ + R A + + D NK ++G+ ++ ++
Sbjct: 248 SNKKLVCENPNVIPLLIDALRRGTVATRSNAAAAI-FTLSALDSNKVLIGKSGILKPLID 306
Query: 200 FLSHELSREREEAVSLLYELSKSEALCEKIGSINGAILILVGMTSSKSENLLTVEKAEKT 259
L ++ + ++ L + + +GA+ +L K N L V++
Sbjct: 307 LLEEGNPLAIKDVAAAIFTLCIAHENRSRAVR-DGAVRVL----GKKISNGLYVDELLAI 361
Query: 260 LANLEKCENNVRQMAENGRLQPLL 283
LA L V ++ E G + LL
Sbjct: 362 LAMLVTHWKAVEELGELGGVSWLL 385
Score = 52 (23.4 bits), Expect = 9.4e-08, Sum P(2) = 9.4e-08
Identities = 18/54 (33%), Positives = 24/54 (44%)
Query: 744 ENLQRRAVWVVERILRTDDIAYE-VSGDPNVSTALVDAFQHADYRTRQIAERAL 796
E LQ V + I DD + V +PNV L+DA + TR A A+
Sbjct: 229 EKLQEDVVTTLLNISIHDDSNKKLVCENPNVIPLLIDALRRGTVATRSNAAAAI 282
Score = 45 (20.9 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 28/97 (28%), Positives = 45/97 (46%)
Query: 306 LNSDVKVLVA-RTVGSCLINIMKSGNMQAREAALKALNQISSCEPSAKVLIHAGI--LPP 362
+N D V + R + + L+ + S N+Q +++A K L ++ + L +
Sbjct: 157 VNEDETVTRSDREIFNSLLCKVSSSNLQDQKSAAKELRLLTRKGTEFRALFGESPDEITR 216
Query: 363 LVKDLFTVGSNHLPMRLKEVSATILANVVNSGHDFDS 399
LV L GSN +L+E T L N+ S HD DS
Sbjct: 217 LVNPLLH-GSNP-DEKLQEDVVTTLLNI--SIHD-DS 248
Score = 39 (18.8 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 16/64 (25%), Positives = 28/64 (43%)
Query: 160 KSSSRKVRCTALETLRIVVEEDDDN-KEILGQGDTVRTIVKFLSHELSREREEAVSLLYE 218
+S ++ + A+ L + D KEI + + TI K SR + +A +L
Sbjct: 390 ESECKRNKENAIVILHTICFSDRTKWKEIKEEENAHGTITKLSREGTSRAQRKANGILDR 449
Query: 219 LSKS 222
L K+
Sbjct: 450 LRKA 453
Score = 39 (18.8 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 15/100 (15%), Positives = 40/100 (40%)
Query: 686 VEKLIALLDHTNEKVVEASLAALSTVIDDGVDIEQGVMVLCEAQGIKPILDVLLEKRTEN 745
+ +L+ L H + + ++T+++ + + ++CE + P+L L + T
Sbjct: 214 ITRLVNPLLHGSNPDEKLQEDVVTTLLNISIHDDSNKKLVCENPNVIPLLIDALRRGTVA 273
Query: 746 LQRRAVWVVERILRTDDIAYEVSGDPNVSTALVDAFQHAD 785
+ A + + D + G + L+D + +
Sbjct: 274 TRSNAAAAIFTLSALDSNKVLI-GKSGILKPLIDLLEEGN 312
>UNIPROTKB|Q6EUK7 [details] [associations]
symbol:PUB4 "U-box domain-containing protein 4"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:AP008208
EMBL:CM000139 GO:GO:0000151 EMBL:AP004030 EMBL:AK062592
RefSeq:NP_001046379.1 UniGene:Os.5133 ProteinModelPortal:Q6EUK7
EnsemblPlants:LOC_Os02g13960.1 GeneID:4328818
KEGG:dosa:Os02t0234300-01 KEGG:osa:4328818 Gramene:Q6EUK7
eggNOG:NOG329430 HOGENOM:HOG000238412 OMA:ENRAYIA
ProtClustDB:CLSN2692596 Uniprot:Q6EUK7
Length = 728
Score = 122 (48.0 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 26/68 (38%), Positives = 39/68 (57%)
Query: 33 FVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTDLNPSIA 92
F CP++ +MRDPV GQT++R +I +W +E G CP + + L L P+ A
Sbjct: 301 FSCPISLDLMRDPVVASTGQTYDRPSIIQWIEE----GHS-TCPNSGQTLADHRLVPNRA 355
Query: 93 LRNTIEEW 100
LR+ I +W
Sbjct: 356 LRSLISQW 363
Score = 121 (47.7 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 76/331 (22%), Positives = 134/331 (40%)
Query: 68 ENGRKPVCPLTQKELRSTDLNPSIALRNTIEEWNARNEAAQLDMARKSLNLGSSESDIMP 127
E G CP + + L L P+ ALR+ I +W Q D N G +E
Sbjct: 332 EEGHS-TCPNSGQTLADHRLVPNRALRSLISQW-CGVYGLQYDSPES--NEGMAEC---- 383
Query: 128 ALKYVQYFCQSSRSNKHVVHNSELIPMIIDMLKSSSRKVRCTALETLRIVVEEDDDNKEI 187
V C SSR+ N +++ ML+ S V+ A + +R++ + N+
Sbjct: 384 ----VAASC-SSRAAMEA--NKATARILVRMLEDGSENVKAVAAKEIRLLAKTGKQNRAF 436
Query: 188 LGQGDTVRTIVKFLSHELSREREEAVSLLYELSKSEALCEKIGSINGAILILVGMTSSKS 247
+ + + + L +E AV+ L LS E +I G + ++VG+ +
Sbjct: 437 IADLGAIPLLCRLLLSNDWMAQENAVTALLNLSIFEPNKGRIMEQEGCLRLIVGVLQN-G 495
Query: 248 ENLLTVEKAEKTLANLEKCENNVRQ-MAENGRLQPLLTQILEGPQETKLSLAAFLGDLAL 306
E A TL +L N + M E G ++ L + + +G K L +L+
Sbjct: 496 WTTEAKENAAATLFSLSVVHNFKKLIMNEPGAVEELASMLTKGTSRGKKDAVMALFNLST 555
Query: 307 NSDVKVLVARTVGSC-LINIMKS-GNMQAREAALKALNQISSCEPSAKVLIH-AGILPPL 363
+ + AR + SC ++ +++S N E A AL + +PS ++H G +
Sbjct: 556 HPESS---ARMLESCAVVALIQSLRNDTVSEEAAGALALLMK-QPS---IVHLVGSSETV 608
Query: 364 VKDLFTVGSNHLPMRLKEVSATILANVVNSG 394
+ L + P + KE + + L + G
Sbjct: 609 ITSLVGLMRRGTP-KGKENAVSALYEICRRG 638
>TAIR|locus:2141226 [details] [associations]
symbol:PUB8 "plant U-box 8" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA;NAS] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00184 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL161554 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:EF637083 EMBL:AL031187 EMBL:EF182720 HSSP:Q8VZ40
IPI:IPI00526364 PIR:T05177 RefSeq:NP_193866.1 UniGene:At.65012
ProteinModelPortal:O81902 SMR:O81902 PaxDb:O81902
EnsemblPlants:AT4G21350.1 GeneID:827885 KEGG:ath:AT4G21350
TAIR:At4g21350 eggNOG:NOG271823 HOGENOM:HOG000272744
InParanoid:O81902 OMA:LCKLPEN PhylomeDB:O81902
ProtClustDB:CLSN2685551 ArrayExpress:O81902 Genevestigator:O81902
Uniprot:O81902
Length = 374
Score = 185 (70.2 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 79/332 (23%), Positives = 149/332 (44%)
Query: 33 FVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTD-LNPSI 91
F CP++ ++M DPV L++G TF+R +I++W ++G + CP+T+ L T L P+
Sbjct: 9 FRCPISLEIMSDPVILQSGHTFDRVSIQQWI----DSGNR-TCPITKLPLSETPYLIPNH 63
Query: 92 ALRNTI---------EEWNARNEAAQLDMARKSL-----NLGSSESDIMPALKYVQYFCQ 137
ALR+ I E R + ++L + SS + + +L + +
Sbjct: 64 ALRSLILNFAHVSLKESSRPRTQQEHSHSQSQALISTLVSQSSSNASKLESLTRLVRLTK 123
Query: 138 SSRSNKHVVHNSELIPMIIDMLKSSSRKVRCTALETLRIVVEEDDDNKEILGQGDTVRTI 197
S + V S + +D + S ++ ++ +L L + EDD+ ++ G +R I
Sbjct: 124 RDSSIRRKVTESGAVRAALDCVDSCNQVLQEKSLSLLLNLSLEDDNKVGLVADG-VIRRI 182
Query: 198 VKFLSHELSREREEAVSLLYELSKSEALCEKIGSINGAILILVGMTSSKSENLLTVEKAE 257
V L + A +LL L+ E IGS AI LV + ++ E+ E
Sbjct: 183 VTVLRVGSPDCKAIAATLLTSLAVVEVNKATIGSYPDAISALVSLLRVGNDR----ERKE 238
Query: 258 KTLANLEKCE--NNVRQMAENGRLQPLLTQILEGPQETKLSLAAFLGDLALNSDVKVLVA 315
A C +N +++ + G + P+L + + E + + L + V+
Sbjct: 239 SATALYALCSFPDNRKRVVDCGSV-PILVEAADSGLERAVEVLGLLVKCRGGREEMSKVS 297
Query: 316 RTVGSCLINIMKSGNMQAREAALKALNQISSC 347
V L+N++++GN++ + +L LN + C
Sbjct: 298 GFV-EVLVNVLRNGNLKGIQYSLFILNCLCCC 328
>TAIR|locus:2032472 [details] [associations]
symbol:AT1G24330 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=IDA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009507 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AC002396
HSSP:Q8VZ40 eggNOG:NOG251146 HOGENOM:HOG000082565
ProtClustDB:CLSN2679347 IPI:IPI00520534 PIR:T00664
RefSeq:NP_173843.2 UniGene:At.41444 ProteinModelPortal:O48700
SMR:O48700 PaxDb:O48700 PRIDE:O48700 EnsemblPlants:AT1G24330.1
GeneID:839049 KEGG:ath:AT1G24330 TAIR:At1g24330 InParanoid:O48700
OMA:RILMGAN PhylomeDB:O48700 Genevestigator:O48700 Uniprot:O48700
Length = 771
Score = 190 (71.9 bits), Expect = 9.4e-11, Sum P(2) = 9.4e-11
Identities = 88/369 (23%), Positives = 157/369 (42%)
Query: 35 CPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTDLNPSIALR 94
CP++ Q+M DPV + +GQT+ER IEKWF + + CP TQ++L L P+ ++
Sbjct: 281 CPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNS-----CPKTQQQLPHLSLTPNYCVK 335
Query: 95 NTIEEWNARNEAA-------QLDMARKSLNLGSSESDIMPALKYVQYFCQSSRSNKHVVH 147
I W +N LD+ L + SES ++ V C + K +
Sbjct: 336 GLIASWCEQNGITVPTGPPESLDLNYWRLAMSDSESPNSKSVDSVG-LC----TPKDI-- 388
Query: 148 NSELIPMIIDMLKSSSRKVRCTALETLRIVVEEDDDNKEILGQGDTVRTIVKFLSHELSR 207
++P+ S R+ + E E D + + G D + + K +L++
Sbjct: 389 --RVVPLEESSTIESERQQK----EKNNAPDEVDSEINVLEGYQDILAIVDK--EEDLAK 440
Query: 208 EREEAVSLLYELSKSEALCEKIGSINGAILILVGMTSSK--SENLLTVEKAEKTLANLEK 265
+ + ++ L +E +G+ NG + + S N E L NL
Sbjct: 441 KCKVVENVRILLKDNEEARILMGA-NGFVEAFLQFLESAVHDNNAAAQETGAMALFNLAV 499
Query: 266 CENNVRQMAENGRLQPLLTQILEGPQETKLSLAAFLGDLALNSDVKVLVARTVGSCLINI 325
N +++ + PLL +++ Q + A +L L V+ + S +N+
Sbjct: 500 NNNRNKELMLTSGVIPLLEKMISCSQSQGPATALYLNLSCLEKAKPVIGSSQAVSFFVNL 559
Query: 326 M-KSGNMQAREAALKALNQISSCEPSAKVLIHAGILPPLVKDLFTVGSNHLPMRLKEVSA 384
+ + Q + AL AL +S+ P+ L+ + I+ L + L + G NHL + E S
Sbjct: 560 LLQDTKTQCKLDALHALYNLSTYSPNIPTLLSSNIIKSL-QVLASTG-NHLWI---EKSL 614
Query: 385 TILANVVNS 393
+L N+ +S
Sbjct: 615 AVLLNLASS 623
Score = 46 (21.3 bits), Expect = 9.4e-11, Sum P(2) = 9.4e-11
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 702 EASLAALSTVIDDGVDIEQGVMVLC 726
+ ++ L+TV+D G +EQ V C
Sbjct: 634 QGMISTLATVLDTGDTVEQEQAVSC 658
>TAIR|locus:2115365 [details] [associations]
symbol:AT4G36550 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0001666 "response to hypoxia" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010310 "regulation of
hydrogen peroxide metabolic process" evidence=RCA] [GO:0031347
"regulation of defense response" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002687 GenomeReviews:CT486007_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:AL161589
GO:GO:0000151 EMBL:Z99708 HSSP:Q8VZ40 IPI:IPI00536151 PIR:E85431
RefSeq:NP_195373.6 UniGene:At.31319 ProteinModelPortal:O23225
SMR:O23225 GeneID:829807 KEGG:ath:AT4G36550 TAIR:At4g36550
eggNOG:NOG316001 HOGENOM:HOG000241850 InParanoid:O23225 OMA:CERIRDS
ArrayExpress:O23225 Genevestigator:O23225 Uniprot:O23225
Length = 718
Score = 169 (64.5 bits), Expect = 9.4e-11, Sum P(2) = 9.4e-11
Identities = 35/97 (36%), Positives = 56/97 (57%)
Query: 25 HIEPIYDAFVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRS 84
H + + F C L++ VM DPV + +G TFER I+KWF E ++ CP+++++L
Sbjct: 215 HNGTLPEKFKCTLSRTVMYDPVIISSGNTFERMQIQKWFDEGNDS-----CPISKRKLDD 269
Query: 85 TDLNPSIALRNTIEEWNARNEAAQLDMARKSLNLGSS 121
L P++ L++ I EW A+N D ARK + +S
Sbjct: 270 FTLKPNVELKSQISEWCAKNGLDVQDPARKHVKASNS 306
Score = 67 (28.6 bits), Expect = 9.4e-11, Sum P(2) = 9.4e-11
Identities = 39/185 (21%), Positives = 81/185 (43%)
Query: 170 ALETLRIVVEEDDDNKEILGQGDTVRTIVKFLSHELSREREEAVSLLYELSKSEALCEKI 229
AL L ++ +I G ++ +++K + + +E+A+ L LS S +C ++
Sbjct: 482 ALNILEVLSNHPHGPSKITSSG-SLSSLLKIVESQAEHLQEQAMITLKNLSSSMEICLEM 540
Query: 230 GSINGAILILVGMTSSKSENLLTVEKAEKTLANLEKCENNVRQMAENGRLQPLLTQILEG 289
S++ + +TS + + + + L NL E + E + ++LE
Sbjct: 541 VSLD----FIQKLTSFLQQKVFC-KHSIIILKNLCSTEKGRGCITETPDCLASIAELLES 595
Query: 290 --PQETKLSLAAFLGDLALNSDVKVLVART---VGSCLINIMKSGNMQAREAA---LKAL 341
P+E + +++ L + LV R + S LI I +G + + +A L+AL
Sbjct: 596 NVPEEQENAISILLQLCVQKIEYCCLVVREATDIYSSLILISNNGTEEVKVSASELLRAL 655
Query: 342 NQISS 346
++ S
Sbjct: 656 VEVDS 660
Score = 52 (23.4 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 11/38 (28%), Positives = 23/38 (60%)
Query: 149 SELIPMIIDMLKSSSRKVRCTALETLRIVVEEDDDNKE 186
+++ +I + + + +V+ +A E LR +VE D D +E
Sbjct: 627 TDIYSSLILISNNGTEEVKVSASELLRALVEVDSDKEE 664
Score = 51 (23.0 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 454 IKSSGATISLVQFVEAPQNDLRLASIELIQNLSPHM 489
I SSG+ SL++ VE+ L+ ++ ++NLS M
Sbjct: 499 ITSSGSLSSLLKIVESQAEHLQEQAMITLKNLSSSM 534
Score = 38 (18.4 bits), Expect = 9.2e-08, Sum P(2) = 9.2e-08
Identities = 11/44 (25%), Positives = 22/44 (50%)
Query: 479 IELIQNLSPHMGHELADALRGAVGQLGSLIRVISENVGISKEQA 522
+E++ N PH ++ + G L SL++++ +EQA
Sbjct: 486 LEVLSN-HPHGPSKITSS-----GSLSSLLKIVESQAEHLQEQA 523
Score = 37 (18.1 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 35/157 (22%), Positives = 64/157 (40%)
Query: 239 LVGMTSSKSENLLTVEKAEKTLANLEKCENNVRQMAENGRLQPLLTQILEGPQETKLSLA 298
L G+T+ + + V E + E R M+ + L+PL+T + + +
Sbjct: 381 LCGLTNLPWDAQIKV--VEDVRSRFEHSTRAFRSMSPSKFLEPLITYLKNALERNGTAGE 438
Query: 299 AFLGDLALNSDVKVLVARTVGSCLINIMK--SGNMQAREAALKALN--QISSCEPSAKVL 354
G L L R + S + K S +++ A +ALN ++ S P
Sbjct: 439 IIKGGLDLLLAFLSGNRRAIESLEEEVFKMFSVFLESEVVAEEALNILEVLSNHPHGPSK 498
Query: 355 I-HAGILPPLVKDLFTVGSNHLP----MRLKEVSATI 386
I +G L L+K + + HL + LK +S+++
Sbjct: 499 ITSSGSLSSLLK-IVESQAEHLQEQAMITLKNLSSSM 534
>TAIR|locus:2008813 [details] [associations]
symbol:AT1G67530 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC011020 HSSP:Q8VZ40
HOGENOM:HOG000082565 ProtClustDB:CLSN2679347 EMBL:AK117197
EMBL:BT006484 IPI:IPI00538541 PIR:G96698 RefSeq:NP_001154455.1
RefSeq:NP_176920.1 UniGene:At.35639 UniGene:At.66850
ProteinModelPortal:Q9CAG5 SMR:Q9CAG5 IntAct:Q9CAG5 PaxDb:Q9CAG5
PRIDE:Q9CAG5 EnsemblPlants:AT1G67530.1 EnsemblPlants:AT1G67530.2
GeneID:843074 KEGG:ath:AT1G67530 TAIR:At1g67530 eggNOG:NOG240771
InParanoid:Q9CAG5 OMA:GELENTR PhylomeDB:Q9CAG5
Genevestigator:Q9CAG5 Uniprot:Q9CAG5
Length = 782
Score = 193 (73.0 bits), Expect = 9.5e-11, Sum P(2) = 9.5e-11
Identities = 87/366 (23%), Positives = 159/366 (43%)
Query: 35 CPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTDLNPSIALR 94
CP++ Q+M DPV + +GQT+ER IEKWF + G CP TQ++L L P+ ++
Sbjct: 278 CPISLQLMCDPVIIASGQTYERVCIEKWFSD----GHN-TCPKTQQQLPHISLTPNNCVK 332
Query: 95 NTIEEWNARNEAAQLDMARKSLNLGSSESDIMPALKYVQYFCQSSRSNK-HVVHNSELIP 153
I W +N Q+ G ES + + +S++S + + + +L
Sbjct: 333 GLIASWCEQN-GTQIPS-------GPPESQDLDYWRLALSDSESTKSQSVNSIGSYKLKG 384
Query: 154 MIIDMLKSSSRKVRCTALETLRIVVEEDDDNKEI-LGQGDTVRTIVKFLSHELSRERE-E 211
+ I L+ + V T V +DDD ++ + + + ++ L+ E E++ +
Sbjct: 385 VKIVPLEENGTTV-VERQNTEESFVSDDDDEEDSDINVLERYQDLLAVLNEEEGLEKKCK 443
Query: 212 AVSLLYELSKSEALCEKIGSINGAILILVGMTSSKSE--NLLTVEKAEKTLANLEKCEN- 268
V + L K + NG + L+ S + N + L NL N
Sbjct: 444 VVEKIRLLLKDDEEARIFMGANGFVEALLRFLGSAVDDNNAAAQDSGAMALFNLAVNNNR 503
Query: 269 NVRQMAENGRLQPLLTQILEGPQETKLSLAAFLGDLALNSDVKVLVARTVGSCLINIM-K 327
N M +G ++ LL +++ + + A +L L+ V+ + L+ ++ K
Sbjct: 504 NKELMLTSGVIR-LLEKMISSAESHGSATALYLNLSCLDEAKSVIGSSQAVPFLVQLLQK 562
Query: 328 SGNMQAREAALKALNQISSCEPSAKVLIHAGILPPLVKDLFTVGSNHLPMRLKEVSATIL 387
Q + AL AL +S+ P+ L+ + I+ L L + G N + + E S +L
Sbjct: 563 EIETQCKLDALHALYNLSTYSPNIPALLSSNIIKSLQGLLASTGEN---LWI-EKSLAVL 618
Query: 388 ANVVNS 393
N+ +S
Sbjct: 619 LNLASS 624
Score = 43 (20.2 bits), Expect = 9.5e-11, Sum P(2) = 9.5e-11
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 609 LLQSNGLDKVQMVSATALENLSLESKNLTKLPELPPS 645
LL SN + +Q + A+ ENL +E K+L L L S
Sbjct: 589 LLSSNIIKSLQGLLASTGENLWIE-KSLAVLLNLASS 624
Score = 42 (19.8 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 16/58 (27%), Positives = 27/58 (46%)
Query: 671 LCSLKETFCLLEGHAVEKLIALLDHTNEKVVEAS--LAALSTVIDDGVDIEQGVMVLC 726
L S E + + AV +A ++ V + +++L+TV+D G EQ V C
Sbjct: 602 LASTGENLWIEKSLAVLLNLASSQEGKDEAVSSQGMISSLATVLDMGDTTEQEQAVSC 659
>TAIR|locus:2171810 [details] [associations]
symbol:PUB38 "plant U-box 38" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0019894 "kinesin binding" evidence=IEA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AB013395 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
EMBL:BT015352 EMBL:BT015720 IPI:IPI00548483 RefSeq:NP_201323.1
UniGene:At.49809 ProteinModelPortal:Q9FJP6 SMR:Q9FJP6 STRING:Q9FJP6
PRIDE:Q9FJP6 EnsemblPlants:AT5G65200.1 GeneID:836643
KEGG:ath:AT5G65200 TAIR:At5g65200 eggNOG:NOG286330
HOGENOM:HOG000239874 InParanoid:Q9FJP6 OMA:RTRHDSA PhylomeDB:Q9FJP6
ProtClustDB:CLSN2719312 Genevestigator:Q9FJP6 Uniprot:Q9FJP6
Length = 556
Score = 111 (44.1 bits), Expect = 3.8e-09, Sum P(2) = 3.8e-09
Identities = 23/69 (33%), Positives = 42/69 (60%)
Query: 33 FVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRS-TDLNPSI 91
F+CP++K VM DPV + +GQTFER ++ CR+ P ++ L +++ P++
Sbjct: 37 FLCPISKSVMSDPVVVSSGQTFERVCVQV----CRDLNFIPKLNDDEESLPDFSNIIPNL 92
Query: 92 ALRNTIEEW 100
+++TI+ W
Sbjct: 93 NMKSTIDTW 101
Score = 109 (43.4 bits), Expect = 3.8e-09, Sum P(2) = 3.8e-09
Identities = 56/216 (25%), Positives = 96/216 (44%)
Query: 140 RSNKHVVHNSELIPMIIDMLKSSSRKVRCTALETLRIVVEEDDDNKEILGQGDTVRTIVK 199
+ NK + +P++ID+LKS SR+ + A T+ + +DDNK +G ++ ++
Sbjct: 297 KKNKLTIVRLGFVPILIDVLKSGSREAQEHAAGTI-FSLSLEDDNKMPIGVLGALQPLLH 355
Query: 200 FL-SHELSREREEAVSLLYELSKSEALCEKIGSINGAILILVGMTSSKSENLLTVEKAEK 258
L + E R R ++ LY L+ ++ K+ + GA+ L M S + +A
Sbjct: 356 ALRAAESDRTRHDSALALYHLTLNQTNRSKLVRL-GAVPALFSMVRSGE----SASRALL 410
Query: 259 TLANLEKCENNVRQMAENGRLQPLLTQI----LEGPQETKLSLAA----FLGDLALNSD- 309
+ NL C M + + L+ ++ E P E + S +A AL+ +
Sbjct: 411 VICNLACCSEGRSAMLDANAVAILVGKLREEWTEEPTEARSSSSARENCVAALFALSHES 470
Query: 310 --VKVLV--ARTVGSCLINIMKSGNMQAREAALKAL 341
K L AR V L + + G +ARE A K L
Sbjct: 471 LRFKGLAKEARAV-EVLKEVEERGTERAREKAKKIL 505
Score = 68 (29.0 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 31/126 (24%), Positives = 59/126 (46%)
Query: 246 KSENLLTVEKAEKTLANLEKCENNVRQMAENGRLQPLLTQILEGPQE-TKLSLAAFLGDL 304
KS + E+ + + + + R + R+ LL ++ + + A L +L
Sbjct: 234 KSSEIFDQEQGLIMMRKMTRTNDEARVSLCSPRILSLLKNMIVSRYSLVQTNALASLVNL 293
Query: 305 ALNSDVKVLVARTVG--SCLINIMKSGNMQAREAALKALNQISSCEPSAKVLIHA-GILP 361
+L+ K+ + R +G LI+++KSG+ +A+E A + +S E K+ I G L
Sbjct: 294 SLDKKNKLTIVR-LGFVPILIDVLKSGSREAQEHAAGTIFSLS-LEDDNKMPIGVLGALQ 351
Query: 362 PLVKDL 367
PL+ L
Sbjct: 352 PLLHAL 357
>TAIR|locus:2154124 [details] [associations]
symbol:AT5G62560 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AB015469 GO:GO:0000151 HOGENOM:HOG000239874
ProtClustDB:CLSN2719312 EMBL:AY128369 EMBL:BT000351 EMBL:AK227203
IPI:IPI00530696 RefSeq:NP_201062.1 UniGene:At.29043
ProteinModelPortal:Q0WUF6 SMR:Q0WUF6 PaxDb:Q0WUF6 PRIDE:Q0WUF6
EnsemblPlants:AT5G62560.1 GeneID:836376 KEGG:ath:AT5G62560
TAIR:At5g62560 eggNOG:NOG313122 InParanoid:Q0WUF6 OMA:FERACIQ
PhylomeDB:Q0WUF6 Genevestigator:Q0WUF6 Uniprot:Q0WUF6
Length = 559
Score = 110 (43.8 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 28/74 (37%), Positives = 46/74 (62%)
Query: 33 FVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKP-VCPLTQKELRSTDLNPSI 91
F+CP+T +M DPV + +GQTFER +++ CR G P + T+ +L ST + P++
Sbjct: 35 FLCPITGFLMSDPVVVSSGQTFERLSVQV----CRNLGYIPDLLDGTRPDL-STVI-PNL 88
Query: 92 ALRNTIEEWNARNE 105
A+++TI W R +
Sbjct: 89 AMKSTIFSWCDRQK 102
Score = 110 (43.8 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 52/209 (24%), Positives = 92/209 (44%)
Query: 140 RSNKHVVHNSELIPMIIDMLKSSSRKVRCTALETLRIVVEEDDDNKEILGQGDTVRTIVK 199
+ NK + S +P++ID+LKS + + + L + ED+ NK ++G V ++
Sbjct: 307 KQNKVKIVRSGFVPLLIDVLKSGTTEAQEHVAGALFSLALEDE-NKMVIGVLGAVEPLLH 365
Query: 200 FL-SHELSREREEAVSLLYELSKSEALCEKIGSINGAILILVGMTSSKSENLLTVEKAEK 258
L S E R R++A LY LS + ++ GA+ L+ M S + +
Sbjct: 366 ALRSSESERARQDAALALYHLSLIPSNRTRLVRA-GAVPTLLSMVRSGD----STSRILL 420
Query: 259 TLANLEKCENNVRQMAENGRLQPLLTQILE---GPQET-KLSLAAFLGDLAL-NSDVKVL 313
L NL C + M + + L+ ++ E G E + + A L L N + L
Sbjct: 421 VLCNLAACPDGKGAMLDGNAVAILVGKLREVGGGDSEAARENCVAVLLTLCQGNLRFRGL 480
Query: 314 VART-VGSCLINIMKSGNMQAREAALKAL 341
+ L+ + ++GN + +E A K L
Sbjct: 481 ASEAGAEEVLMEVEENGNERVKEKASKIL 509
Score = 96 (38.9 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 43/163 (26%), Positives = 82/163 (50%)
Query: 208 EREEAVSLLYELSKS-EALCEKIGSINGAILILVGMTSSKSENLLTVEKAEKTL-ANLEK 265
+ E+ + LL ++++S E L ++ IL + NL+ A + +LEK
Sbjct: 250 DHEQGLILLRKMTRSSEDL--RVSLCTDRILSFLRSLLVSRYNLVQTNAAASVVNLSLEK 307
Query: 266 CENNVRQMAENGRLQPLLTQILE-GPQETKLSLAAFLGDLALNSDVKVLVARTVGSC--L 322
+N V+ + +G + PLL +L+ G E + +A L LAL + K+++ +G+ L
Sbjct: 308 -QNKVK-IVRSGFV-PLLIDVLKSGTTEAQEHVAGALFSLALEDENKMVIG-VLGAVEPL 363
Query: 323 INIMKSGNMQ-AREAALKALNQISSCEPSAKVLIHAGILPPLV 364
++ ++S + AR+ A AL +S + L+ AG +P L+
Sbjct: 364 LHALRSSESERARQDAALALYHLSLIPSNRTRLVRAGAVPTLL 406
Score = 67 (28.6 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 26/110 (23%), Positives = 51/110 (46%)
Query: 260 LANLEKCENNVRQMAENGRLQPLLTQILEGPQE-TKLSLAAFLGDLALNSDVKVLVART- 317
L + + ++R R+ L +L + + AA + +L+L KV + R+
Sbjct: 258 LRKMTRSSEDLRVSLCTDRILSFLRSLLVSRYNLVQTNAAASVVNLSLEKQNKVKIVRSG 317
Query: 318 VGSCLINIMKSGNMQAREAALKALNQISSCEPSAKVLIHAGILPPLVKDL 367
LI+++KSG +A+E AL ++ + + V+ G + PL+ L
Sbjct: 318 FVPLLIDVLKSGTTEAQEHVAGALFSLALEDENKMVIGVLGAVEPLLHAL 367
Score = 66 (28.3 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 37/193 (19%), Positives = 78/193 (40%)
Query: 119 GSSESDIMPALKYVQYFCQSSRSNKHVVHNSELIPMIIDMLKSSSRKVRCTALETLRIVV 178
G+ D L ++ +SS + + ++ + +L S V+ A ++ + +
Sbjct: 245 GTDIFDHEQGLILLRKMTRSSEDLRVSLCTDRILSFLRSLLVSRYNLVQTNAAASV-VNL 303
Query: 179 EEDDDNKEILGQGDTVRTIVKFLSHELSREREEAVSLLYELSKSEALCEKIGSINGAILI 238
+ NK + + V ++ L + +E L+ L+ + IG + +
Sbjct: 304 SLEKQNKVKIVRSGFVPLLIDVLKSGTTEAQEHVAGALFSLALEDENKMVIGVLGAVEPL 363
Query: 239 LVGMTSSKSENLLTVEKAEKTLANLEKCENNVRQMAENGRLQPLLTQILEGPQETKLSLA 298
L + SS+SE + A L +L +N ++ G + LL+ + G +++ L
Sbjct: 364 LHALRSSESERAR--QDAALALYHLSLIPSNRTRLVRAGAVPTLLSMVRSGDSTSRILLV 421
Query: 299 AFLGDLALNSDVK 311
L +LA D K
Sbjct: 422 --LCNLAACPDGK 432
Score = 65 (27.9 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 24/74 (32%), Positives = 41/74 (55%)
Query: 574 EGLLSVLARVTFVLSDEPDAIALCCEHNLAALFIELLQSNGLDKVQMVSATALENLSLES 633
+GL+ +L ++T S E ++LC + L+ F+ L + + VQ +A ++ NLSLE
Sbjct: 253 QGLI-LLRKMT--RSSEDLRVSLCTDRILS--FLRSLLVSRYNLVQTNAAASVVNLSLEK 307
Query: 634 KNLTKLPELPPSGF 647
+N K+ SGF
Sbjct: 308 QNKVKIVR---SGF 318
Score = 50 (22.7 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 35/149 (23%), Positives = 63/149 (42%)
Query: 607 IELLQSNGLDKVQMVSATALENLSLESKNLTKLPELPPSGFCASIFPCF-SKQPVITGLC 665
+ L+S+ ++ + +A AL +LSL N T+L S+ S ++ LC
Sbjct: 364 LHALRSSESERARQDAALALYHLSLIPSNRTRLVRAGAVPTLLSMVRSGDSTSRILLVLC 423
Query: 666 RLHRGLCSLKETFCLLEGHAVEKLIALLDHT----NEKVVEASLAALSTVIDDGVDIEQG 721
L C + +L+G+AV L+ L +E E +A L T+ + +G
Sbjct: 424 NL--AACPDGKG-AMLDGNAVAILVGKLREVGGGDSEAARENCVAVLLTLCQGNLRF-RG 479
Query: 722 VMVLCEAQGIKPILDVLLEKRTENLQRRA 750
L G + +L + E E ++ +A
Sbjct: 480 ---LASEAGAEEVLMEVEENGNERVKEKA 505
>TAIR|locus:2039265 [details] [associations]
symbol:PUB23 "plant U-box 23" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;IGI;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0002679 "respiratory burst involved in defense
response" evidence=IGI;RCA] [GO:0006952 "defense response"
evidence=IGI] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006612
"protein targeting to membrane" evidence=RCA] [GO:0006944 "cellular
membrane fusion" evidence=RCA] [GO:0009862 "systemic acquired
resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0031348
"negative regulation of defense response" evidence=RCA] [GO:0035556
"intracellular signal transduction" evidence=RCA] [GO:0042742
"defense response to bacterium" evidence=RCA] [GO:0043069 "negative
regulation of programmed cell death" evidence=RCA] [GO:0050832
"defense response to fungus" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005829 EMBL:CP002685
GenomeReviews:CT485783_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0009414 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 GO:GO:0051865
EMBL:AC007017 GO:GO:0002679 HSSP:Q8VZ40 HOGENOM:HOG000238505
eggNOG:NOG331697 ProtClustDB:CLSN2684770 EMBL:BT005829
EMBL:AK227343 IPI:IPI00548709 PIR:G84774 RefSeq:NP_181137.2
UniGene:At.43241 ProteinModelPortal:Q84TG3 SMR:Q84TG3 IntAct:Q84TG3
STRING:Q84TG3 PRIDE:Q84TG3 EnsemblPlants:AT2G35930.1 GeneID:818166
KEGG:ath:AT2G35930 TAIR:At2g35930 InParanoid:Q84TG3 OMA:RLHARAW
PhylomeDB:Q84TG3 Genevestigator:Q84TG3 Uniprot:Q84TG3
Length = 411
Score = 167 (63.8 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 51/213 (23%), Positives = 98/213 (46%)
Query: 22 ERLHIEPIYDAFVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKE 81
E + I P F+CP++ ++M+DPV + G T++R++IEKW G+K CP+T+++
Sbjct: 8 EEIEIPPF---FLCPISLEIMKDPVIVSTGITYDRDSIEKWLFA----GKKNSCPVTKQD 60
Query: 82 LRSTDLNPSIALRNTIEEW---NARNEAAQLDMARKSL----------NLGSSESDIMPA 128
+ DL P+ LR I+ W NA ++ R + + SS + +
Sbjct: 61 ITDADLTPNHTLRRLIQSWCTLNASYGVERIPTPRPPICKSEIEKLIRDSASSHENQVKC 120
Query: 129 LKYVQYFCQSSRSNKHVVHNSELIPMIIDMLKSSSRKVRCT--ALETLRIVVEEDDDNKE 186
LK ++ + +NK + + + + +++ + S T AL L + + K
Sbjct: 121 LKRLRQIVSENATNKRCLEAAGVPEFLANIVSNDSENGSLTDEALNLLYHLETSETVLKN 180
Query: 187 ILGQ---GDTVRTIVKFLSHELSREREEAVSLL 216
+L + V+++ K + + R A LL
Sbjct: 181 LLNNKKDNNIVKSLTKIMQRGMYESRVYATLLL 213
>TAIR|locus:2079964 [details] [associations]
symbol:PUB22 "plant U-box 22" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;IGI;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0002679 "respiratory burst involved in defense
response" evidence=IGI;RCA] [GO:0006952 "defense response"
evidence=IGI] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0006865 "amino acid transport" evidence=RCA]
[GO:0015824 "proline transport" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143
GO:GO:0005829 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0009414
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GO:GO:0051865 EMBL:AL050300 GO:GO:0002679 HSSP:Q8VZ40
HOGENOM:HOG000238505 EMBL:BT015763 EMBL:BT020203 EMBL:AK228993
IPI:IPI00521627 PIR:T08454 RefSeq:NP_190813.1 UniGene:At.35294
ProteinModelPortal:Q9SVC6 SMR:Q9SVC6 STRING:Q9SVC6
EnsemblPlants:AT3G52450.1 GeneID:824410 KEGG:ath:AT3G52450
TAIR:At3g52450 eggNOG:NOG331697 InParanoid:Q9SVC6 OMA:RNSEMAM
PhylomeDB:Q9SVC6 ProtClustDB:CLSN2684770 Genevestigator:Q9SVC6
Uniprot:Q9SVC6
Length = 435
Score = 167 (63.8 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 63/221 (28%), Positives = 107/221 (48%)
Query: 33 FVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTDLNPSIA 92
F+CP++ +M+DPV + G T++RE+IEKW +G+K CP+T++ + TDL P+
Sbjct: 11 FLCPISLDIMKDPVIVSTGITYDRESIEKWLF----SGKKNSCPVTKQVITETDLTPNHT 66
Query: 93 LRNTIEEW---NARNEAAQLDMAR----KS----LNLGSSESDI--MPALKYVQYFCQSS 139
LR I+ W NA ++ + KS L SS S + + LK ++ +
Sbjct: 67 LRRLIQSWCTLNASYGIERIPTPKPPICKSEIEKLIKESSSSHLNQVKCLKRLRQIVSEN 126
Query: 140 RSNKHVVHNSELIPMIIDMLKSSSRKVRCTALETLRIVVEEDDDNKEILGQGDTVRTIVK 199
+NK + +E +P + + S+S + +L N + Q + + +
Sbjct: 127 TTNKRCLEAAE-VPEFLANIVSNSVDTYNSPSSSL------SSSNLNDMCQSNMLEN--R 177
Query: 200 FLSHELSRE-REEAVSLLYELSKSE-ALCEKIGSINGAILI 238
F S SR +EA+S+LY L SE AL + + G L+
Sbjct: 178 FDS---SRSLMDEALSVLYHLDTSETALKSLLNNKKGTNLV 215
>TAIR|locus:2146183 [details] [associations]
symbol:AT5G18320 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
IPI:IPI00534776 RefSeq:NP_197333.2 UniGene:At.54897
ProteinModelPortal:Q3E9F7 SMR:Q3E9F7 PaxDb:Q3E9F7 PRIDE:Q3E9F7
EnsemblPlants:AT5G18320.1 GeneID:831950 KEGG:ath:AT5G18320
TAIR:At5g18320 eggNOG:NOG312656 InParanoid:Q3E9F7 OMA:NTIMIEP
PhylomeDB:Q3E9F7 ProtClustDB:CLSN2686550 Genevestigator:Q3E9F7
Uniprot:Q3E9F7
Length = 458
Score = 117 (46.2 bits), Expect = 6.8e-09, Sum P(2) = 6.8e-09
Identities = 44/152 (28%), Positives = 73/152 (48%)
Query: 229 IGSINGAILILVGMTSSKSE----NLLTVEKAEKTLANLEKCENNVRQMAENGRLQPLLT 284
+ I+ +I L+ S+ E +L E L NL E+N +AEN + PLLT
Sbjct: 199 VAGIHDSITRLLSPLSTLDEAVDSSLELQENIVTALFNLSILESNKTVIAENCLVIPLLT 258
Query: 285 QIL-EGPQETKLSLAAFLGDLALNSDVKVLVARTVG-SCLINIMKSGNMQA-REAALKAL 341
+ L +G ET+ + AA L L+ K+++ + LI++++ G++ A +EA
Sbjct: 259 KSLKQGTDETRRNAAATLSSLSAIDSNKIIIGNSEAVKALIDLIEEGDLLATKEATSTVF 318
Query: 342 NQISSCEPSAKVLIHAGILPPLVKDLFTVGSN 373
N E KV + AG++ K + GSN
Sbjct: 319 NLCIVLENKGKV-VSAGLIHAATKKI-KAGSN 348
Score = 98 (39.6 bits), Expect = 6.8e-09, Sum P(2) = 6.8e-09
Identities = 21/68 (30%), Positives = 36/68 (52%)
Query: 33 FVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTDLNPSIA 92
F+C L+ +M +PV + +GQT+E+ I +W K R CP T++ L P+
Sbjct: 76 FICTLSNTIMIEPVIIASGQTYEKRYITEWLKHER------TCPKTKQVLSHRLWIPNHL 129
Query: 93 LRNTIEEW 100
+ + I +W
Sbjct: 130 ISDLITQW 137
Score = 92 (37.4 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 39/151 (25%), Positives = 66/151 (43%)
Query: 141 SNKHVV-HNSELIPMIIDMLKSSSRKVRCTALETLRIVVEEDDDNKEILGQGDTVRTIVK 199
SNK V+ N +IP++ LK + + R A TL + D NK I+G + V+ ++
Sbjct: 242 SNKTVIAENCLVIPLLTKSLKQGTDETRRNAAATLSSL-SAIDSNKIIIGNSEAVKALID 300
Query: 200 FLSHELSREREEAVSLLYELSKSEALCEKIGSINGAILILVGMTSSKSENLLTVEKAEKT 259
+ +EA S ++ L + E G + A LI K+ + V++
Sbjct: 301 LIEEGDLLATKEATSTVFNLC---IVLENKGKVVSAGLIHAATKKIKAGS--NVDELLSL 355
Query: 260 LANLEKCENNVRQMAENGRLQPLLTQILEGP 290
LA + V +M + G + L + IL P
Sbjct: 356 LALISTHNRAVEEMDKLGFIYDLFS-ILRKP 385
>TAIR|locus:2100372 [details] [associations]
symbol:PUB39 "PLANT U-BOX 39" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL049746 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
HOGENOM:HOG000239874 ProtClustDB:CLSN2719312 EMBL:AY091018
EMBL:BT020355 IPI:IPI00534988 PIR:T07721 RefSeq:NP_190366.1
UniGene:At.35768 ProteinModelPortal:Q9STT1 SMR:Q9STT1 PaxDb:Q9STT1
PRIDE:Q9STT1 EnsemblPlants:AT3G47820.1 GeneID:823936
KEGG:ath:AT3G47820 TAIR:At3g47820 eggNOG:NOG271898
InParanoid:Q9STT1 OMA:ARENCVG PhylomeDB:Q9STT1
Genevestigator:Q9STT1 Uniprot:Q9STT1
Length = 509
Score = 112 (44.5 bits), Expect = 7.7e-09, Sum P(2) = 7.7e-09
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 33 FVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKP-VCPLTQKELRSTDLNPSI 91
F+CP+T +M DPV + +GQTFER +++ CR P + TQ +L ST + P++
Sbjct: 14 FLCPITGFLMSDPVVVASGQTFERISVQV----CRNLSFAPKLHDGTQPDL-STVI-PNL 67
Query: 92 ALRNTIEEWNARNE 105
A+++TI W RN+
Sbjct: 68 AMKSTILSWCDRNK 81
Score = 104 (41.7 bits), Expect = 7.7e-09, Sum P(2) = 7.7e-09
Identities = 42/154 (27%), Positives = 71/154 (46%)
Query: 140 RSNKHVVHNSELIPMIIDMLKSSSRKVRCTALETL-RIVVEEDDDNKEILGQGDTVRTIV 198
+ NK + S +P++ID+LKS S + + + L + VEE+ NK ++G V ++
Sbjct: 256 KPNKLKIVRSGFVPLLIDVLKSGSTEAQEHVIGALFSLAVEEE--NKMVIGVLGAVEPLL 313
Query: 199 KFL-SHELSREREEAVSLLYELS---KSEALCEKIGSINGAILILVGMTSSKSENLLTVE 254
L S E R R++A LY LS + + K G++ +L ++ S S LL
Sbjct: 314 HALRSSESERARQDAALALYHLSLIPNNRSRLVKAGAVP-MMLSMIRSGESASRILLL-- 370
Query: 255 KAEKTLANLEKCENNVRQMAENGRLQPLLTQILE 288
L NL C M + + L+ ++ E
Sbjct: 371 -----LCNLAACSEGKGAMLDGNAVSILVGKLRE 399
Score = 77 (32.2 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 36/161 (22%), Positives = 76/161 (47%)
Query: 208 EREEAVSLLYELSKSEALCEKIGSINGAILILVGMTSSKSENLLTVEKAEKTLANLEKCE 267
+ E+ + L + ++S +I IL L+ N++ A ++ NL +
Sbjct: 199 DHEQGLIQLRKTTRSNETT-RISLCTDRILSLLRSLIVSRYNIVQTNAAA-SIVNLSLEK 256
Query: 268 NNVRQMAENGRLQPLLTQILE-GPQETKLSLAAFLGDLALNSDVKVLVARTVGSC--LIN 324
N ++ +G + PLL +L+ G E + + L LA+ + K+++ +G+ L++
Sbjct: 257 PNKLKIVRSGFV-PLLIDVLKSGSTEAQEHVIGALFSLAVEEENKMVIG-VLGAVEPLLH 314
Query: 325 IMKSGNMQ-AREAALKALNQISSCEPSAKVLIHAGILPPLV 364
++S + AR+ A AL +S + L+ AG +P ++
Sbjct: 315 ALRSSESERARQDAALALYHLSLIPNNRSRLVKAGAVPMML 355
Score = 70 (29.7 bits), Expect = 4.2e-07, Sum P(3) = 4.2e-07
Identities = 24/92 (26%), Positives = 48/92 (52%)
Query: 278 RLQPLLTQILEGPQE-TKLSLAAFLGDLALNSDVKVLVART-VGSCLINIMKSGNMQARE 335
R+ LL ++ + + AA + +L+L K+ + R+ LI+++KSG+ +A+E
Sbjct: 225 RILSLLRSLIVSRYNIVQTNAAASIVNLSLEKPNKLKIVRSGFVPLLIDVLKSGSTEAQE 284
Query: 336 AALKALNQISSCEPSAKVLIHAGILPPLVKDL 367
+ AL ++ E + V+ G + PL+ L
Sbjct: 285 HVIGALFSLAVEEENKMVIGVLGAVEPLLHAL 316
Score = 62 (26.9 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 26/74 (35%), Positives = 39/74 (52%)
Query: 574 EGLLSVLARVTFVLSDEPDAIALCCEHNLAALFIELLQSNGLDKVQMVSATALENLSLES 633
+GL+ L + T S+E I+LC + L+ L L+ S + VQ +A ++ NLSLE
Sbjct: 202 QGLIQ-LRKTT--RSNETTRISLCTDRILS-LLRSLIVSR-YNIVQTNAAASIVNLSLEK 256
Query: 634 KNLTKLPELPPSGF 647
N K+ SGF
Sbjct: 257 PNKLKIVR---SGF 267
Score = 62 (26.9 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 39/152 (25%), Positives = 56/152 (36%)
Query: 118 LGSSESD-IMPALKYVQYFCQSSRSNKHVVHNSELIPMIIDMLKSSSRKVRCTALETLRI 176
L SSES+ Y +N+ + + +PM++ M++S R L
Sbjct: 316 LRSSESERARQDAALALYHLSLIPNNRSRLVKAGAVPMMLSMIRSGESASRILLLLCNLA 375
Query: 177 VVEEDDDNKEILGQGDTVRTIVKFLSHELSRE-----REEAVSLLYELSKSEALCEKIGS 231
E K + G+ V +V L E RE V L LS + S
Sbjct: 376 ACSE---GKGAMLDGNAVSILVGKLRESGGAESDAAARENCVGALLTLSVGNMRFRGLAS 432
Query: 232 INGAILILVGMTSSKSENLLTVEKAEKTLANL 263
GA IL + S+S + EKA K L L
Sbjct: 433 EAGAEEILTEIVESESGSGRLKEKASKILQTL 464
Score = 59 (25.8 bits), Expect = 4.2e-07, Sum P(3) = 4.2e-07
Identities = 38/158 (24%), Positives = 69/158 (43%)
Query: 607 IELLQSNGLDKVQMVSATALENLSLESKNLTKLPELPPSGFCASIFPCF-SKQPVITGLC 665
+ L+S+ ++ + +A AL +LSL N ++L + S+ S ++ LC
Sbjct: 313 LHALRSSESERARQDAALALYHLSLIPNNRSRLVKAGAVPMMLSMIRSGESASRILLLLC 372
Query: 666 RLHRGLCSLKETFCLLEGHAVEKLIALLDHTNEKVVEASLAALSTVIDDGVDIEQGVMV- 724
L CS + +L+G+AV L+ L + E+ AA + + + G M
Sbjct: 373 NL--AACS-EGKGAMLDGNAVSILVGKLRESGG--AESDAAARENCVGALLTLSVGNMRF 427
Query: 725 --LCEAQGIKPILDVLLEKRTENLQRRAVWVVERILRT 760
L G + IL ++E +E+ R +IL+T
Sbjct: 428 RGLASEAGAEEILTEIVE--SESGSGRLKEKASKILQT 463
Score = 58 (25.5 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 36/144 (25%), Positives = 63/144 (43%)
Query: 663 GLCRLHRGLCSLKETFCLLEGHAVEKLIALLDHTNEKVVEASLAALSTVIDDGVDIEQGV 722
GL +L + S + T L + L+ L + +V+ + AA ++++ + +E+
Sbjct: 203 GLIQLRKTTRSNETTRISLCTDRILSLLRSLIVSRYNIVQTNAAA--SIVN--LSLEKPN 258
Query: 723 MVLCEAQGIKPIL-DVLLEKRTENLQRRAVWVVERILRTDDIAYEVSGDPNVSTALVDAF 781
+ G P+L DVL TE Q + + L ++ V G L+ A
Sbjct: 259 KLKIVRSGFVPLLIDVLKSGSTE-AQEHVIGALFS-LAVEEENKMVIGVLGAVEPLLHAL 316
Query: 782 QHADY-RTRQIAERALKHIDKIPN 804
+ ++ R RQ A AL H+ IPN
Sbjct: 317 RSSESERARQDAALALYHLSLIPN 340
>TAIR|locus:2097390 [details] [associations]
symbol:AT3G49810 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:BT029174
EMBL:AY084697 IPI:IPI00522796 PIR:T46047 RefSeq:NP_566927.1
UniGene:At.43608 UniGene:At.71195 ProteinModelPortal:Q058P4
SMR:Q058P4 IntAct:Q058P4 PRIDE:Q058P4 EnsemblPlants:AT3G49810.1
GeneID:824143 KEGG:ath:AT3G49810 TAIR:At3g49810 eggNOG:NOG289804
HOGENOM:HOG000077474 InParanoid:Q058P4 OMA:ELRKMMD PhylomeDB:Q058P4
ProtClustDB:CLSN2686657 Genevestigator:Q058P4 Uniprot:Q058P4
Length = 448
Score = 162 (62.1 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 73/304 (24%), Positives = 130/304 (42%)
Query: 22 ERLHIEPIYDAFVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKE 81
+ L ++ I F+CP++ + M+DPVTL GQT+ER I KWF N CP T +E
Sbjct: 57 KELDLQDIPSVFICPISLEPMQDPVTLCTGQTYERLNIHKWF-----NLGHLTCPTTMQE 111
Query: 82 LRSTDLNPSIALRNTIEEWNARN----EAAQLDMARKSLN-LGS-----SESDIMPALKY 131
L + P+ L + I W ++ + D+ +++ LG+ ++ + +
Sbjct: 112 LWDDTVTPNKTLHHLIYTWFSQKYVLMKKRSEDVQGRAIEILGTLKKAKGQARVHALSEL 171
Query: 132 VQYFCQSSRSNKHVVHNSELIPMIIDMLKSSSRKVRCTALETLRIVVEEDDDNKEILGQG 191
Q + K VV + +I +L + + + + + ++ D D+K L Q
Sbjct: 172 KQIVIAHLMARKTVVEEGG-VSVISSLLGPFTSHAVGSEVVAILVSLDLDSDSKSGLMQP 230
Query: 192 DTVRTIVKFLSHELSREREEAVSLLYELSKSEALCEKIGSINGAILILVGMTSSKSENLL 251
V IV L+ + + L+ L + + ++ S + ++ L+ + K
Sbjct: 231 AKVSLIVDMLNDGSNETKINCARLIRGLVEEKGFRAELVSSHSLLVGLMRLVKDKRHRN- 289
Query: 252 TVEKAEKTLANLEKCENNVRQMAENGRLQPLLTQILEGPQETKLSLAAFLGDLALNSDVK 311
V A + L + VR + + P L IL L LA F+ D AL +DV+
Sbjct: 290 GVSPALRLLKPIS-VHKQVRSLMVSIGAVPQLVDILPSLDPECLELALFVLD-ALCTDVE 347
Query: 312 VLVA 315
VA
Sbjct: 348 GRVA 351
>TAIR|locus:2096687 [details] [associations]
symbol:AT3G01400 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000225
InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
EMBL:CP002686 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:AC010870 ProtClustDB:CLSN2686276 IPI:IPI00535994
RefSeq:NP_566136.1 UniGene:At.20281 ProteinModelPortal:Q9SGH8
SMR:Q9SGH8 PRIDE:Q9SGH8 EnsemblPlants:AT3G01400.1 GeneID:821320
KEGG:ath:AT3G01400 TAIR:At3g01400 InParanoid:Q9SGH8 OMA:VAELECP
PhylomeDB:Q9SGH8 Genevestigator:Q9SGH8 Uniprot:Q9SGH8
Length = 355
Score = 155 (59.6 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 50/186 (26%), Positives = 92/186 (49%)
Query: 192 DTVRTIVKFL--SHELSREREEAVSL-LYELSKSEALCEKIGSINGAILILVGMTSSKSE 248
D + +V L S+ + +++ A+ + L +K E KI GAI L+ + SS
Sbjct: 62 DLINHLVSHLDSSYSIDEQKQAAMEIRLLSKNKPENRI-KIAKA-GAIKPLISLISSS-- 117
Query: 249 NLLTVEKAEKTLANLEKCENNVRQMAENGRLQPLLTQILEGPQETKLSLAAFLGDLALNS 308
+L E + NL C+ N +A +G ++PL+ + G K + A L L+
Sbjct: 118 DLQLQEYGVTAILNLSLCDENKESIASSGAIKPLVRALKMGTPTAKENAACALLRLSQIE 177
Query: 309 DVKVLVARTVG-SCLINIMKSGNMQAREAALKALNQISSCEPSAKVLIHAGILPPLVKDL 367
+ KV + R+ L+N++++G +A++ A AL + S + + + +GI+ PLV+ +
Sbjct: 178 ENKVAIGRSGAIPLLVNLLETGGFRAKKDASTALYSLCSAKENKIRAVQSGIMKPLVELM 237
Query: 368 FTVGSN 373
GSN
Sbjct: 238 ADFGSN 243
Score = 131 (51.2 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 54/241 (22%), Positives = 112/241 (46%)
Query: 132 VQYFCQSSRSNKHVVHNSELIPMIIDMLKSSSRKVR---CTALETLRIVVEEDDDNKEIL 188
++ ++ N+ + + I +I ++ SS +++ TA+ L + D+NKE +
Sbjct: 87 IRLLSKNKPENRIKIAKAGAIKPLISLISSSDLQLQEYGVTAILNLSLC----DENKESI 142
Query: 189 GQGDTVRTIVKFLSHELSREREEAVSLLYELSKSEALCEKIGSINGAILILVGMTSSKSE 248
++ +V+ L +E A L LS+ E IG +GAI +LV + ++
Sbjct: 143 ASSGAIKPLVRALKMGTPTAKENAACALLRLSQIEENKVAIGR-SGAIPLLVNLL--ETG 199
Query: 249 NLLTVEKAEKTLANLEKCENNVRQMAENGRLQPLLTQILEGPQETKLSLAAFLGDLALN- 307
+ A L +L + N + ++G ++PL+ +++ + +AF+ L ++
Sbjct: 200 GFRAKKDASTALYSLCSAKENKIRAVQSGIMKPLV-ELMADFGSNMVDKSAFVMSLLMSV 258
Query: 308 SDVKVLVARTVG-SCLINIMKSGNMQAREAALKALNQISSCEPSA--KVLI-HAGILPPL 363
+ K + G L+ I++ G + +E A+ L Q+ CE S + ++ G +PPL
Sbjct: 259 PESKPAIVEEGGVPVLVEIVEVGTQRQKEMAVSILLQL--CEESVVYRTMVAREGAIPPL 316
Query: 364 V 364
V
Sbjct: 317 V 317
Score = 45 (20.9 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 17/73 (23%), Positives = 32/73 (43%)
Query: 502 GQLGSLIRVISENVGISKEQAAAVGLLAELPERDLGLTRQMLDEGAFGLIFSRVKSIQLG 561
G + L+ ++ VG +++ AV +L +L E + + EGA + V Q G
Sbjct: 269 GGVPVLVEIVE--VGTQRQKEMAVSILLQLCEESVVYRTMVAREGAIPPL---VALSQAG 323
Query: 562 ETRGSRFVTPFLE 574
+R + +E
Sbjct: 324 TSRAKQKAEALIE 336
>TAIR|locus:2090604 [details] [associations]
symbol:PUB25 "plant U-box 25" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0010200 "response to chitin"
evidence=IEP] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB025624
HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT025982 EMBL:AY086503
EMBL:AK229923 IPI:IPI00525992 RefSeq:NP_566632.1 UniGene:At.5707
ProteinModelPortal:Q9LT79 SMR:Q9LT79 EnsemblPlants:AT3G19380.1
GeneID:821472 KEGG:ath:AT3G19380 TAIR:At3g19380 eggNOG:NOG262907
InParanoid:Q9LT79 OMA:ECTERAK PhylomeDB:Q9LT79
ProtClustDB:CLSN2682687 Genevestigator:Q9LT79 Uniprot:Q9LT79
Length = 421
Score = 140 (54.3 bits), Expect = 8.1e-08, Sum P(2) = 8.1e-08
Identities = 28/74 (37%), Positives = 42/74 (56%)
Query: 33 FVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTDLNPSIA 92
F CP++ ++M+DPVT+ GQT++R +IE W G CP+T+ L L P+
Sbjct: 18 FRCPISLELMQDPVTVCTGQTYDRASIESWVSI----GNNTTCPVTRAPLSDFTLIPNHT 73
Query: 93 LRNTIEEWNARNEA 106
LR I+EW N +
Sbjct: 74 LRRLIQEWCVANRS 87
Score = 62 (26.9 bits), Expect = 8.1e-08, Sum P(2) = 8.1e-08
Identities = 23/100 (23%), Positives = 43/100 (43%)
Query: 124 DIMPALKYVQYFCQSSRSNKHVVHNSELIPMIID-MLKSSSRKVRCTALETLRIVVEEDD 182
D AL V+ C++ ++ +P+++ +L+ S R A L + E+
Sbjct: 300 DTERALATVELLCRTPEGCAAFGEHALTVPLLVKTILRVSDRATEYAAGALLALCTAEER 359
Query: 183 DNKEILGQGDTVRTIVKFLSHELSREREEAVSLLYELSKS 222
+E G G V+ ++ S R +++A LL L S
Sbjct: 360 WREEAAGAGVVVQLLLMVQSECTERAKKKAQKLLKLLRDS 399
Score = 55 (24.4 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 46/220 (20%), Positives = 84/220 (38%)
Query: 163 SRKVRCTALETLRIVVEEDDDNKEILGQGDTVRTIVKFLSHELSRER--EEAVSLLYELS 220
S + R AL LR + D N+ ++ + ++K L E + E+++LL L
Sbjct: 121 SVRSRAAALRRLRGFARDSDKNRVLIAAHNATEILIKILFSETTSSELVSESLALLVMLP 180
Query: 221 KSEA-LCEKIGSINGAILILVGM-------TSSKSENLLTVEKAEKTLANLEKCENNVRQ 272
+E I S G + L + T + L+ + A+L+ +N
Sbjct: 181 ITEPNQFVSISSDPGRVEFLTRLLFDSSIETRVNAAALIEIVSTGTKSADLKGSISNSES 240
Query: 273 MAENGRLQPLLTQILEGPQETKLSLAAFLGDLALNSDVKVLVARTVGSCLINIMKSGNMQ 332
+ E G L LL + + K+ + ++ S + + LI+ + + +
Sbjct: 241 VFE-GVLD-LLRNPISSRRALKIGIKTLFALCSVKSTRHIAITAGAPEILIDRLAADFDR 298
Query: 333 A-REAALKALNQISSC-EPSAKVLIHAGILPPLVKDLFTV 370
E AL + + E A HA +P LVK + V
Sbjct: 299 CDTERALATVELLCRTPEGCAAFGEHALTVPLLVKTILRV 338
>TAIR|locus:2198235 [details] [associations]
symbol:AT1G01830 "AT1G01830" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000225 InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176
SMART:SM00185 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
eggNOG:NOG268795 HOGENOM:HOG000239669 ProtClustDB:CLSN2683369
EMBL:AY059739 EMBL:AY091273 IPI:IPI00535901 RefSeq:NP_001077443.1
RefSeq:NP_001077444.1 RefSeq:NP_563637.1 UniGene:At.26641
ProteinModelPortal:Q93YW3 SMR:Q93YW3 EnsemblPlants:AT1G01830.1
EnsemblPlants:AT1G01830.2 EnsemblPlants:AT1G01830.3 GeneID:839264
KEGG:ath:AT1G01830 TAIR:At1g01830 InParanoid:Q93YW3 OMA:GHLESKH
PhylomeDB:Q93YW3 ArrayExpress:Q93YW3 Genevestigator:Q93YW3
Uniprot:Q93YW3
Length = 574
Score = 144 (55.7 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 59/229 (25%), Positives = 117/229 (51%)
Query: 170 ALETLRIVVEEDDDN--KEILGQGDTVRTIVKFLSHELSREREEAVSLLYELSKSEALCE 227
ALE+L ++ED+ ++G+ + V +V+ L+ +R RE+AV+L+ L++S C+
Sbjct: 187 ALESLLGAMQEDEKMVLMPLIGRAN-VAALVQLLTATSTRIREKAVNLISVLAES-GHCD 244
Query: 228 KIGSINGAILILVGMTSSKSENLLTVEKAEKTLANLEKCENNVRQMAENGRLQPLLTQIL 287
+ G + LV + S S L T EKA + L E N R++A +G + PL+
Sbjct: 245 EWLISEGVLPPLVRLIESGS--LETKEKAAIAIQRLSMTEENAREIAGHGGITPLIDLCK 302
Query: 288 EGPQETKLSLAAFLGDLALNSDVKVLVART-VGSCLINIMKSGNMQ-AREAALKALNQIS 345
G ++ + AA L +++ S+++ L+A + I+++ G + +RE + L ++
Sbjct: 303 TGDSVSQAASAAALKNMSAVSELRQLLAEEGIIRVSIDLLNHGILLGSREHMAECLQNLT 362
Query: 346 SCEPSAK-VLIHAGILPPLVKDLFTVGSNHLPMRLKEVSATILANVVNS 393
+ + + ++ G +P L+ L LP ++ + T L N++ S
Sbjct: 363 AASDALREAIVSEGGVPSLLAYL----DGPLP---QQPAVTALRNLIPS 404
Score = 133 (51.9 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 58/270 (21%), Positives = 129/270 (47%)
Query: 128 ALKYVQYFCQSSRSNKHVVHNSELIPMIIDMLKSSSRKVRCTALETLRIVVEEDDDNKEI 187
A+ + +S ++ ++ ++P ++ +++S S + + A ++ + +++ +EI
Sbjct: 230 AVNLISVLAESGHCDEWLISEG-VLPPLVRLIESGSLETKEKAAIAIQRLSMTEENAREI 288
Query: 188 LGQGDTVRTIVKFLSHELSREREEAVSLLYELSKSEALCEKIGSINGAILILVGMTSSKS 247
G G + ++ S + + + L +S L + + G I + + + +
Sbjct: 289 AGHGG-ITPLIDLCKTGDSVSQAASAAALKNMSAVSELRQLLAE-EGIIRVSIDLLNH-G 345
Query: 248 ENLLTVEKAEKTLANLEKCENNVRQ--MAENGRLQPLLTQILEGPQETKLSLAAFLGDLA 305
L + E + L NL + +R+ ++E G P L L+GP + ++ A L +L
Sbjct: 346 ILLGSREHMAECLQNLTAASDALREAIVSEGG--VPSLLAYLDGPLPQQPAVTA-LRNLI 402
Query: 306 LNSDVKVLVARTVGSCLINIMKSGNMQAREAALKALNQISSCEPSAKVLI-HAGILPPLV 364
+ + ++ VA + L +++KSG++ A++AA A+ + + C P K L+ +G +P +V
Sbjct: 403 PSVNPEIWVALNLLPRLRHVLKSGSLGAQQAAASAICRFA-CSPETKRLVGESGCIPEIV 461
Query: 365 KDLFTVGSNHLPMRLKEVSATILANVVNSG 394
K L SN +E +A +A +V G
Sbjct: 462 K-LLESKSNGC----REAAAQAIAGLVAEG 486
Score = 61 (26.5 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 22/98 (22%), Positives = 41/98 (41%)
Query: 454 IKSSGATISLVQFVEAPQNDLRLASIELIQNLSPHMGHELADALRGAVGQLGSLIRVISE 513
+ SG +V+ +E+ N R A+ + I L G + + L +L+ ++
Sbjct: 451 VGESGCIPEIVKLLESKSNGCREAAAQAIAGLVAE-GRIRRELKKDGKSVLTNLVMLLDS 509
Query: 514 NVGISKEQAAAVGLLAELPERDLGLTRQMLDEGAFGLI 551
N G + ++ A GLL + M+ GA G +
Sbjct: 510 NPGNTAKKYAVAGLLGMSGSEKS--KKMMVSYGAIGYL 545
Score = 53 (23.7 bits), Expect = 6.7e-07, Sum P(2) = 6.7e-07
Identities = 25/100 (25%), Positives = 45/100 (45%)
Query: 619 QMVSATALENL--SLESKNLTKLPELPPSGFCASIFPCFSKQPVITGLCRLHRGLCSLKE 676
Q + TAL NL S+ + L LP ++Q + +CR CS E
Sbjct: 391 QQPAVTALRNLIPSVNPEIWVALNLLPRLRHVLKSGSLGAQQAAASAICRF---ACS-PE 446
Query: 677 TFCLL-EGHAVEKLIALLDHTNEKVVEASLAALSTVIDDG 715
T L+ E + +++ LL+ + EA+ A++ ++ +G
Sbjct: 447 TKRLVGESGCIPEIVKLLESKSNGCREAAAQAIAGLVAEG 486
>TAIR|locus:2010424 [details] [associations]
symbol:PUB45 "plant U-box 45" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0019894 "kinesin binding" evidence=IEA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC069471
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HSSP:Q8VZ40 EMBL:AY094469 EMBL:BT002721 EMBL:AK230080
IPI:IPI00517206 PIR:D86404 RefSeq:NP_174112.1 UniGene:At.22435
ProteinModelPortal:Q9C7G1 SMR:Q9C7G1 PRIDE:Q9C7G1
EnsemblPlants:AT1G27910.1 GeneID:839684 KEGG:ath:AT1G27910
TAIR:At1g27910 eggNOG:NOG251146 HOGENOM:HOG000082565
InParanoid:Q9C7G1 OMA:SENMSIP PhylomeDB:Q9C7G1
ProtClustDB:CLSN2679347 Genevestigator:Q9C7G1 Uniprot:Q9C7G1
Length = 768
Score = 144 (55.7 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 59/203 (29%), Positives = 94/203 (46%)
Query: 35 CPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTDLNPSIALR 94
CP++ Q+M DPV + +GQT+ER IEKWF + G CP T ++L L P+ ++
Sbjct: 285 CPISLQLMYDPVIIASGQTYERICIEKWFSD----GHN-TCPKTHQQLSHLCLTPNYCVK 339
Query: 95 NTIEEWNARNEAAQLDMARKSLNLGSSESDIMPALKYVQYFCQSSRSNKHVVHNSELIPM 154
I W +N D +SL+L AL + +RS K V + +L +
Sbjct: 340 ALISSWCEQNGVQVPDGPPESLDLNYWRL----ALSVSE--STDTRSAKRV-GSCKLKDV 392
Query: 155 IIDMLKSSS--RKVRCTA--LETLRIVVEEDDDNKEILGQGDTVRTIVKFLSH--ELSRE 208
+ L+ S ++ C + E +VE + L DT+R + + L ++
Sbjct: 393 KVVPLEESGTIKEEACESEYQEDQVTLVERCTELLTTLTDVDTLRKKCRVVEQIRVLLKD 452
Query: 209 REEAVSLLYELSKSEALCEKIGS 231
EEA L+ E EAL + +GS
Sbjct: 453 DEEARILMGENGCVEALLQFLGS 475
Score = 64 (27.6 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 29/118 (24%), Positives = 50/118 (42%)
Query: 679 CLLEGHAVEKLIALLDHTNEKVVEASLAALSTVIDDGVDIEQGVMVLCEAQGIKPILDVL 738
CLL V L +L ++ E SLA L ++ + E G + A + L +
Sbjct: 586 CLLSADLVNALQSLTISDEQRWTEKSLAVLLNLVLN----EAGKDEMVSAPSLVSNLCTI 641
Query: 739 LEKRTENLQRRAVWVVERILRTDDIAYEVSGDPNVSTALVDAFQHADYRTRQIAERAL 796
L+ N Q +AV ++ + +I E+ V +LV + R R+ A++ L
Sbjct: 642 LDTGEPNEQEQAVSLLLILCNHSEICSEMVLQEGVIPSLVSISVNGTQRGRERAQKLL 699
Score = 58 (25.5 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 22/81 (27%), Positives = 33/81 (40%)
Query: 495 DALRGAVGQLGSLIRVISENVGISKEQAAAVGLLAELPERDLGLTRQMLDEGAF-GLIFS 553
D + A + +L ++ + G EQ AV LL L + +L EG L+
Sbjct: 626 DEMVSAPSLVSNLCTIL--DTGEPNEQEQAVSLLLILCNHSEICSEMVLQEGVIPSLVSI 683
Query: 554 RVKSIQLGETRGSRFVTPFLE 574
V Q G R + +T F E
Sbjct: 684 SVNGTQRGRERAQKLLTLFRE 704
>TAIR|locus:2013850 [details] [associations]
symbol:CMPG1 ""CYS, MET, PRO, and GLY protein 1""
species:3702 "Arabidopsis thaliana" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0015824 "proline transport" evidence=RCA] [GO:0035556
"intracellular signal transduction" evidence=RCA]
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC026480
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 UniGene:At.23473 HSSP:Q8VZ40 EMBL:AY034913
EMBL:AY063104 EMBL:AY087421 IPI:IPI00524256 PIR:D96686
RefSeq:NP_564866.1 UniGene:At.71474 ProteinModelPortal:Q9C8D1
SMR:Q9C8D1 STRING:Q9C8D1 EnsemblPlants:AT1G66160.1 GeneID:842931
KEGG:ath:AT1G66160 TAIR:At1g66160 eggNOG:NOG283749
HOGENOM:HOG000238505 InParanoid:Q9C8D1 OMA:AFSENAN PhylomeDB:Q9C8D1
ProtClustDB:CLSN2689039 Genevestigator:Q9C8D1 Uniprot:Q9C8D1
Length = 431
Score = 136 (52.9 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 27/68 (39%), Positives = 43/68 (63%)
Query: 33 FVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTDLNPSIA 92
F CP++ ++M+DPV + +G T++RE IEKWF E+G + CP+T L S + P+
Sbjct: 37 FQCPISYELMKDPVIIASGITYDRENIEKWF----ESGYQ-TCPVTNTVLTSLEQIPNHT 91
Query: 93 LRNTIEEW 100
+R I+ W
Sbjct: 92 IRRMIQGW 99
Score = 65 (27.9 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 26/114 (22%), Positives = 58/114 (50%)
Query: 150 ELIPMIIDMLKSSSRKVRCTALETLRIVVEEDDDNKEILGQGDTVRTIVKFLSHELSRER 209
+L+ + ++ML S V AL L ++ E + +++ + +VK + ++S E+
Sbjct: 293 DLVNITVEMLVDSENSVCEKALTVLNVICETKEGREKVRRNKLVIPILVKKIL-KIS-EK 350
Query: 210 EEAVSLLYELSKS-------EALCEKIGSINGAILIL-VGMTSSKSENLLTVEK 255
++ VS+++++ KS EAL ++G+ +++L VG E + + K
Sbjct: 351 KDLVSVMWKVCKSGDGSEVEEAL--RLGAFKKLVVMLQVGCGEGTKEKVTELLK 402
Score = 42 (19.8 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 334 REAALKALNQISSCEPSAKVLIHAGIL 360
+EA +K++N+ S+C S + IH IL
Sbjct: 255 QEAFMKSINRDSTCVNSL-ISIHHMIL 280
>CGD|CAL0001835 [details] [associations]
symbol:VAC8 species:5476 "Candida albicans" [GO:0000011
"vacuole inheritance" evidence=ISS;IMP] [GO:0030448 "hyphal growth"
evidence=IMP] [GO:0000324 "fungal-type vacuole" evidence=ISS]
[GO:0000329 "fungal-type vacuole membrane" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0071563
"Myo2p-Vac17p-Vac8p transport complex" evidence=IEA] [GO:0071561
"nucleus-vacuole junction" evidence=IEA] [GO:0043495 "protein
anchor" evidence=IEA] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:0071562 "nucleus-vacuole junction assembly" evidence=IEA]
[GO:0071255 "CVT vesicle assembly" evidence=IEA] [GO:0042144
"vacuole fusion, non-autophagic" evidence=IEA] [GO:0016236
"macroautophagy" evidence=IEA] InterPro:IPR000225
InterPro:IPR016024 InterPro:IPR026958 PROSITE:PS50176 SMART:SM00185
CGD:CAL0001835 GO:GO:0005774 GO:GO:0071216 GO:GO:0036180
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0000011
GO:GO:0000324 GO:GO:0030448 eggNOG:NOG265712 KO:K08332
EMBL:AACQ01000222 EMBL:AACQ01000221 RefSeq:XP_710979.1
RefSeq:XP_710992.1 ProteinModelPortal:Q59MN0 STRING:Q59MN0
GeneID:3647410 GeneID:3647417 KEGG:cal:CaO19.745
KEGG:cal:CaO19.8364 PANTHER:PTHR23315:SF8 Uniprot:Q59MN0
Length = 585
Score = 134 (52.2 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 84/349 (24%), Positives = 151/349 (43%)
Query: 195 RTIVKFLSHELSREREEAV-SLLYELSKSEALC-----EK-IGSINGAILILVGMTSSKS 247
R+ V F S+ R V S +L +S AL EK + +N +L + + +
Sbjct: 40 RSDVDFFSNGPLRALSTLVYSENIDLQRSAALAFAEITEKDVREVNRDVLEPILILLQSA 99
Query: 248 ENLLTVEKAE-KTLANLEKCENNVRQMAENGRLQPLLTQILEGPQETKLSLAAFLGDLAL 306
++ V++A L NL N + E G L+PL+ Q++ E + + + +LA
Sbjct: 100 DS--EVQRAACGALGNLAVNTENKILIVEMGGLEPLIRQMMSTNIEVQCNAVGCITNLAT 157
Query: 307 NSDVKVLVARTVGSC--LINIMKSGNMQAREAALKALNQISSCEPSAKVLIHAGILPPLV 364
D K +A++ G+ L + KS +++ + A AL ++ + + L++AG +P LV
Sbjct: 158 QDDNKSKIAKS-GALIPLTKLAKSKDIRVQRNATGALLNMTHSGENRQELVNAGAVPVLV 216
Query: 365 KDLFTVGSNHLPMRLKEVSATILANVVNSGHDFDSITVGPDNQTLVSED--IVHNLLHLI 422
L SN ++ T L+N+ D + + + L S + +V L+HL+
Sbjct: 217 SLL----SNE-DADVQYYCTTALSNIA-----VDEV----NRKKLASTEPKLVGQLVHLM 262
Query: 423 SNTGPTIECKLLQXXXXXXXXXXXXXXXXXAIKSSGATISLVQFVEAPQNDLRLASIELI 482
+ P ++C Q +++ G LVQ + L LA++ I
Sbjct: 263 DSPSPRVQC---QATLALRNLASDSGYQVEIVRAGGLP-HLVQLLTCNHQPLVLAAVACI 318
Query: 483 QNLSPHMGHELADALRGAVGQLGSLIRVISENVGISKEQAAAVGLLAEL 531
+N+S H L +AL G L L+ ++ + + Q AV L L
Sbjct: 319 RNISIH---PLNEALIIEAGFLKPLVGLL-DYTDSEEIQCHAVSTLRNL 363
Score = 126 (49.4 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 51/223 (22%), Positives = 101/223 (45%)
Query: 145 VVHNSELIPMIIDMLKSSSRKVRCTALETLRIVVEEDDDNKEILGQGDTVRTIVKFLSHE 204
+V L P+I M+ S++ +V+C A+ + + +DD+ +I G + S +
Sbjct: 124 IVEMGGLEPLIRQMM-STNIEVQCNAVGCITNLATQDDNKSKIAKSGALIPLTKLAKSKD 182
Query: 205 LSREREEAVSLLYELSKSEALCEKIGSINGAILILVGMTSSKSENLLTVEKAEKTLANLE 264
+ +R +LL E E + + GA+ +LV + S++ ++ L+N+
Sbjct: 183 IRVQRNATGALLNMTHSGENRQELVNA--GAVPVLVSLLSNEDADVQYY--CTTALSNIA 238
Query: 265 KCENNVRQMAENG-RLQPLLTQILEGPQ-ETKLSLAAFLGDLALNSDVKVLVARTVG-SC 321
E N +++A +L L +++ P + L +LA +S +V + R G
Sbjct: 239 VDEVNRKKLASTEPKLVGQLVHLMDSPSPRVQCQATLALRNLASDSGYQVEIVRAGGLPH 298
Query: 322 LINIMKSGNMQAREAALKALNQISSCEPSAKVLIHAGILPPLV 364
L+ ++ + AA+ + IS + ++I AG L PLV
Sbjct: 299 LVQLLTCNHQPLVLAAVACIRNISIHPLNEALIIEAGFLKPLV 341
Score = 123 (48.4 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 66/305 (21%), Positives = 128/305 (41%)
Query: 205 LSREREEAVSLLYELSKSEALCEKIGSINGAILILVGMTSSKSENLLTVEKAEKTLANLE 264
L+ EA+S L + ++ + + NG + L T SEN+ A LA E
Sbjct: 22 LAENEREAISALLQYLENRSDVDFFS--NGPLRAL--STLVYSENIDLQRSA--ALAFAE 75
Query: 265 KCENNVRQMAENGRLQPLLTQILEGPQETKLSLAAFLGDLALNSDVKVLVARTVG-SCLI 323
E +VR++ + L+P+L + E + + LG+LA+N++ K+L+ G LI
Sbjct: 76 ITEKDVREVNRDV-LEPILILLQSADSEVQRAACGALGNLAVNTENKILIVEMGGLEPLI 134
Query: 324 NIMKSGNMQAREAALKALNQISSCEPSAKVLIHAGILPPLVKDLFTVGSNHLPMRLKEVS 383
M S N++ + A+ + +++ + + + +G L PL K S + R++ +
Sbjct: 135 RQMMSTNIEVQCNAVGCITNLATQDDNKSKIAKSGALIPLTK---LAKSKDI--RVQRNA 189
Query: 384 ATILANVVNSGHDFDSITVGPDNQTLVSEDIVHNLLHLISNTGPTIECKLLQXXXXXXXX 443
L N+ +SG + Q LV+ V L+ L+SN ++
Sbjct: 190 TGALLNMTHSGEN---------RQELVNAGAVPVLVSLLSNEDADVQYYC--TTALSNIA 238
Query: 444 XXXXXXXXXAIKSSGATISLVQFVEAPQNDLRLASIELIQNLSPHMGHELADALRGAVGQ 503
A LV +++P ++ + ++NL+ G+++ G +
Sbjct: 239 VDEVNRKKLASTEPKLVGQLVHLMDSPSPRVQCQATLALRNLASDSGYQVEIVRAGGLPH 298
Query: 504 LGSLI 508
L L+
Sbjct: 299 LVQLL 303
Score = 77 (32.2 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 51/194 (26%), Positives = 79/194 (40%)
Query: 579 VLARVTFV--LSDEPDAIALCCEHNLAALFIELLQSNGLDKVQMVSATALENLSLES-KN 635
VLA V + +S P AL E + LL +++Q + + L NL+ S KN
Sbjct: 311 VLAAVACIRNISIHPLNEALIIEAGFLKPLVGLLDYTDSEEIQCHAVSTLRNLAASSEKN 370
Query: 636 LTKLPELPPSGFCASIF---PCFSKQPVITGLCRLHRGLCSLKETFCLLEGHAVEKLIAL 692
T L C + P + Q I+ + LK L E H ++ LI L
Sbjct: 371 RTALLAAGAVDKCKELVLKVP-LTVQSEISACFAILALADDLKPK--LYESHIIDVLIPL 427
Query: 693 LDHTNEKVVEASLAALSTVIDDGVDIEQGVMVLCE-AQ---GIKPILDVLLEKRTENLQR 748
N +V S AAL+ + V E +L AQ GI L LE + +
Sbjct: 428 TFSENGEVCGNSAAALANLCSR-VSNEHKQYILNNWAQPNEGIYGFLIRFLESGSPTFEH 486
Query: 749 RAVWVVERILRTDD 762
A+W + ++L +++
Sbjct: 487 IALWTILQLLESNN 500
>UNIPROTKB|Q59MN0 [details] [associations]
symbol:VAC8 "Vacuolar protein 8" species:237561 "Candida
albicans SC5314" [GO:0000011 "vacuole inheritance"
evidence=ISS;IMP] [GO:0000324 "fungal-type vacuole" evidence=ISS]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0030448 "hyphal
growth" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] InterPro:IPR000225 InterPro:IPR016024
InterPro:IPR026958 PROSITE:PS50176 SMART:SM00185 CGD:CAL0001835
GO:GO:0005774 GO:GO:0071216 GO:GO:0036180 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0000011 GO:GO:0000324
GO:GO:0030448 eggNOG:NOG265712 KO:K08332 EMBL:AACQ01000222
EMBL:AACQ01000221 RefSeq:XP_710979.1 RefSeq:XP_710992.1
ProteinModelPortal:Q59MN0 STRING:Q59MN0 GeneID:3647410
GeneID:3647417 KEGG:cal:CaO19.745 KEGG:cal:CaO19.8364
PANTHER:PTHR23315:SF8 Uniprot:Q59MN0
Length = 585
Score = 134 (52.2 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 84/349 (24%), Positives = 151/349 (43%)
Query: 195 RTIVKFLSHELSREREEAV-SLLYELSKSEALC-----EK-IGSINGAILILVGMTSSKS 247
R+ V F S+ R V S +L +S AL EK + +N +L + + +
Sbjct: 40 RSDVDFFSNGPLRALSTLVYSENIDLQRSAALAFAEITEKDVREVNRDVLEPILILLQSA 99
Query: 248 ENLLTVEKAE-KTLANLEKCENNVRQMAENGRLQPLLTQILEGPQETKLSLAAFLGDLAL 306
++ V++A L NL N + E G L+PL+ Q++ E + + + +LA
Sbjct: 100 DS--EVQRAACGALGNLAVNTENKILIVEMGGLEPLIRQMMSTNIEVQCNAVGCITNLAT 157
Query: 307 NSDVKVLVARTVGSC--LINIMKSGNMQAREAALKALNQISSCEPSAKVLIHAGILPPLV 364
D K +A++ G+ L + KS +++ + A AL ++ + + L++AG +P LV
Sbjct: 158 QDDNKSKIAKS-GALIPLTKLAKSKDIRVQRNATGALLNMTHSGENRQELVNAGAVPVLV 216
Query: 365 KDLFTVGSNHLPMRLKEVSATILANVVNSGHDFDSITVGPDNQTLVSED--IVHNLLHLI 422
L SN ++ T L+N+ D + + + L S + +V L+HL+
Sbjct: 217 SLL----SNE-DADVQYYCTTALSNIA-----VDEV----NRKKLASTEPKLVGQLVHLM 262
Query: 423 SNTGPTIECKLLQXXXXXXXXXXXXXXXXXAIKSSGATISLVQFVEAPQNDLRLASIELI 482
+ P ++C Q +++ G LVQ + L LA++ I
Sbjct: 263 DSPSPRVQC---QATLALRNLASDSGYQVEIVRAGGLP-HLVQLLTCNHQPLVLAAVACI 318
Query: 483 QNLSPHMGHELADALRGAVGQLGSLIRVISENVGISKEQAAAVGLLAEL 531
+N+S H L +AL G L L+ ++ + + Q AV L L
Sbjct: 319 RNISIH---PLNEALIIEAGFLKPLVGLL-DYTDSEEIQCHAVSTLRNL 363
Score = 126 (49.4 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 51/223 (22%), Positives = 101/223 (45%)
Query: 145 VVHNSELIPMIIDMLKSSSRKVRCTALETLRIVVEEDDDNKEILGQGDTVRTIVKFLSHE 204
+V L P+I M+ S++ +V+C A+ + + +DD+ +I G + S +
Sbjct: 124 IVEMGGLEPLIRQMM-STNIEVQCNAVGCITNLATQDDNKSKIAKSGALIPLTKLAKSKD 182
Query: 205 LSREREEAVSLLYELSKSEALCEKIGSINGAILILVGMTSSKSENLLTVEKAEKTLANLE 264
+ +R +LL E E + + GA+ +LV + S++ ++ L+N+
Sbjct: 183 IRVQRNATGALLNMTHSGENRQELVNA--GAVPVLVSLLSNEDADVQYY--CTTALSNIA 238
Query: 265 KCENNVRQMAENG-RLQPLLTQILEGPQ-ETKLSLAAFLGDLALNSDVKVLVARTVG-SC 321
E N +++A +L L +++ P + L +LA +S +V + R G
Sbjct: 239 VDEVNRKKLASTEPKLVGQLVHLMDSPSPRVQCQATLALRNLASDSGYQVEIVRAGGLPH 298
Query: 322 LINIMKSGNMQAREAALKALNQISSCEPSAKVLIHAGILPPLV 364
L+ ++ + AA+ + IS + ++I AG L PLV
Sbjct: 299 LVQLLTCNHQPLVLAAVACIRNISIHPLNEALIIEAGFLKPLV 341
Score = 123 (48.4 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 66/305 (21%), Positives = 128/305 (41%)
Query: 205 LSREREEAVSLLYELSKSEALCEKIGSINGAILILVGMTSSKSENLLTVEKAEKTLANLE 264
L+ EA+S L + ++ + + NG + L T SEN+ A LA E
Sbjct: 22 LAENEREAISALLQYLENRSDVDFFS--NGPLRAL--STLVYSENIDLQRSA--ALAFAE 75
Query: 265 KCENNVRQMAENGRLQPLLTQILEGPQETKLSLAAFLGDLALNSDVKVLVARTVG-SCLI 323
E +VR++ + L+P+L + E + + LG+LA+N++ K+L+ G LI
Sbjct: 76 ITEKDVREVNRDV-LEPILILLQSADSEVQRAACGALGNLAVNTENKILIVEMGGLEPLI 134
Query: 324 NIMKSGNMQAREAALKALNQISSCEPSAKVLIHAGILPPLVKDLFTVGSNHLPMRLKEVS 383
M S N++ + A+ + +++ + + + +G L PL K S + R++ +
Sbjct: 135 RQMMSTNIEVQCNAVGCITNLATQDDNKSKIAKSGALIPLTK---LAKSKDI--RVQRNA 189
Query: 384 ATILANVVNSGHDFDSITVGPDNQTLVSEDIVHNLLHLISNTGPTIECKLLQXXXXXXXX 443
L N+ +SG + Q LV+ V L+ L+SN ++
Sbjct: 190 TGALLNMTHSGEN---------RQELVNAGAVPVLVSLLSNEDADVQYYC--TTALSNIA 238
Query: 444 XXXXXXXXXAIKSSGATISLVQFVEAPQNDLRLASIELIQNLSPHMGHELADALRGAVGQ 503
A LV +++P ++ + ++NL+ G+++ G +
Sbjct: 239 VDEVNRKKLASTEPKLVGQLVHLMDSPSPRVQCQATLALRNLASDSGYQVEIVRAGGLPH 298
Query: 504 LGSLI 508
L L+
Sbjct: 299 LVQLL 303
Score = 77 (32.2 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 51/194 (26%), Positives = 79/194 (40%)
Query: 579 VLARVTFV--LSDEPDAIALCCEHNLAALFIELLQSNGLDKVQMVSATALENLSLES-KN 635
VLA V + +S P AL E + LL +++Q + + L NL+ S KN
Sbjct: 311 VLAAVACIRNISIHPLNEALIIEAGFLKPLVGLLDYTDSEEIQCHAVSTLRNLAASSEKN 370
Query: 636 LTKLPELPPSGFCASIF---PCFSKQPVITGLCRLHRGLCSLKETFCLLEGHAVEKLIAL 692
T L C + P + Q I+ + LK L E H ++ LI L
Sbjct: 371 RTALLAAGAVDKCKELVLKVP-LTVQSEISACFAILALADDLKPK--LYESHIIDVLIPL 427
Query: 693 LDHTNEKVVEASLAALSTVIDDGVDIEQGVMVLCE-AQ---GIKPILDVLLEKRTENLQR 748
N +V S AAL+ + V E +L AQ GI L LE + +
Sbjct: 428 TFSENGEVCGNSAAALANLCSR-VSNEHKQYILNNWAQPNEGIYGFLIRFLESGSPTFEH 486
Query: 749 RAVWVVERILRTDD 762
A+W + ++L +++
Sbjct: 487 IALWTILQLLESNN 500
>TAIR|locus:2194564 [details] [associations]
symbol:PUB18 "plant U-box 18" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA;IDA] [GO:0010029 "regulation of seed
germination" evidence=IGI] InterPro:IPR001841 InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00184 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0010029 GO:GO:0004842
EMBL:AC007067 GO:GO:0000151 HOGENOM:HOG000238412 HSSP:Q8VZ40
EMBL:AY075683 IPI:IPI00537444 PIR:B86239 RefSeq:NP_172526.1
UniGene:At.14982 ProteinModelPortal:Q9XIJ5 SMR:Q9XIJ5 PRIDE:Q9XIJ5
EnsemblPlants:AT1G10560.1 GeneID:837597 KEGG:ath:AT1G10560
TAIR:At1g10560 eggNOG:NOG251934 InParanoid:Q9XIJ5 OMA:EPSSKHR
PhylomeDB:Q9XIJ5 ProtClustDB:CLSN2679599 Genevestigator:Q9XIJ5
Uniprot:Q9XIJ5
Length = 697
Score = 136 (52.9 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 90/363 (24%), Positives = 153/363 (42%)
Query: 75 CPLTQKELRSTDLNPSIALRNTIEEWNARNEAAQLDMARKSLNLGSSESDIMPALKYVQY 134
CP+T K L ST+L ++++R I + N ++R+ S D++P
Sbjct: 329 CPITGKILTSTELVDNVSVRQVIRKHCKTNGIVLAGISRRR----KSHDDVVPES----- 379
Query: 135 FCQSSRSNKHVVH--NSELIPMIIDMLKSSSRKVRCTALETLRIVVEEDDDNKEILGQGD 192
+ + K + SELI + ++ A+ +R+ + N+ L +
Sbjct: 380 -LAAKGAGKLIAKFLTSELI--------NGGEEMIYRAVREIRVQTKTSSFNRSCLVKAG 430
Query: 193 TVRTIVKFLSHELSREREEAVSLLYELSKSEALCEKIGSINGAILILVGMTSSKSENLLT 252
V ++K LS R +E A++ + LSK KI IL+ + +K+E L
Sbjct: 431 AVTPLLKLLSSVDIRIQENAMAGILNLSKHVTGKSKIAGEGLKILVEILNEGAKTETRLY 490
Query: 253 VEKAEKTLANLEKCENNVRQMAENGRLQPLLTQILEGPQ---ETKLS-LAAFLGDLALNS 308
A L L E+ R + EN P L I++G K S L A +G L + S
Sbjct: 491 SASA---LFYLSSVEDYSRLIGENPDAIPGLMNIVKGDDYGDSAKRSALLAVMG-LLMQS 546
Query: 309 DV--KVLVARTVGSCLINIMKSGNMQAREAA--LKALNQISSCEPSAKVLIHAGILPPLV 364
D +VL A V L+++++SG + A L L +++ +I G L V
Sbjct: 547 DNHWRVLAAGAV-PILLDLLRSGEISGGLTADCLATLAKLAEYPDGTIGVIRRGGLKLAV 605
Query: 365 KDLFTVGSNHLPMRLKEVSATILANV-VNSGHDFDSITVGPDNQTLVSEDIVHNLLHLIS 423
K L + S P+ +K+ ++ N+ +N G D VG LV +V L+ +
Sbjct: 606 KILSS--SEDSPVAVKQHCVGLILNLCLNGGRD----VVG----VLVKNSLVMGSLYTVL 655
Query: 424 NTG 426
+ G
Sbjct: 656 SNG 658
Score = 135 (52.6 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 30/94 (31%), Positives = 52/94 (55%)
Query: 34 VCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTDLNPSIAL 93
+CP++ ++M DPV +E G T++R +I KWF +G CP+T K L ST+L ++++
Sbjct: 293 LCPISLEIMTDPVVIETGHTYDRSSITKWFG----SGNI-TCPITGKILTSTELVDNVSV 347
Query: 94 RNTIEEWNARNEAAQLDMARKSLNLGSSESDIMP 127
R I + N ++R+ S D++P
Sbjct: 348 RQVIRKHCKTNGIVLAGISRRR----KSHDDVVP 377
Score = 68 (29.0 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 22/71 (30%), Positives = 33/71 (46%)
Query: 479 IELIQNLSPHMGHELADALRGAVGQLGSLIRVISEN-VGISKEQAAAVGLLAELPERDLG 537
+ LI NL + G ++ L +GSL V+S G SK+ +A + ++ E ER G
Sbjct: 623 VGLILNLCLNGGRDVVGVLVKNSLVMGSLYTVLSNGEYGGSKKASALIRMIHEFQERKTG 682
Query: 538 LTRQMLDEGAF 548
L G F
Sbjct: 683 SVEPNLQRGRF 693
Score = 51 (23.0 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 19/108 (17%), Positives = 49/108 (45%)
Query: 679 CLLEGHAVEKLIALLDHTNEKVVEASLAALSTVIDDGVDIEQGVMVLCEAQGIKPILDVL 738
CL++ AV L+ LL + ++ E ++A + + V + + +G+K ++++L
Sbjct: 425 CLVKAGAVTPLLKLLSSVDIRIQENAMAGILN-LSKHVTGKSKIA----GEGLKILVEIL 479
Query: 739 LEKRTENLQRRAVWVVERILRTDDIAYEVSGDPNVSTALVDAFQHADY 786
E + + + + +D + + +P+ L++ + DY
Sbjct: 480 NEGAKTETRLYSASALFYLSSVEDYSRLIGENPDAIPGLMNIVKGDDY 527
Score = 51 (23.0 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 49/237 (20%), Positives = 95/237 (40%)
Query: 313 LVARTVGSCLINIMKSGNMQAREAAL-KALNQIS-SCEPSA---KVLIHAGILPPLVKDL 367
L A+ G + + S + E + +A+ +I + S+ L+ AG + PL+K L
Sbjct: 380 LAAKGAGKLIAKFLTSELINGGEEMIYRAVREIRVQTKTSSFNRSCLVKAGAVTPLLKLL 439
Query: 368 FTVGSNHLPMRLKEVSATILANVVN-SGHDFDSITVGPDNQTLVSEDIVHNLLHLISNTG 426
+V +R++E +A ++N S H +T G + E + +L I N G
Sbjct: 440 SSVD-----IRIQE---NAMAGILNLSKH----VT-GKSK--IAGEGL--KILVEILNEG 482
Query: 427 PTIECKLLQXXXXXXXXXXXXXXXXXAIKSSGATISLVQFVEAPQ--NDLRLASIELIQN 484
E +L ++ A L+ V+ + + +++ +
Sbjct: 483 AKTETRLYSASALFYLSSVEDYSRLIG-ENPDAIPGLMNIVKGDDYGDSAKRSALLAVMG 541
Query: 485 LSPHMGHELADALRGAVGQLGSLIRVISENVGISKEQAAAVGLLAELPERDLGLTRQ 541
L + GAV L L+R + G++ + A + LAE P+ +G+ R+
Sbjct: 542 LLMQSDNHWRVLAAGAVPILLDLLRSGEISGGLTADCLATLAKLAEYPDGTIGVIRR 598
>TAIR|locus:2102455 [details] [associations]
symbol:AT3G54790 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AL138650 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:AK118613 IPI:IPI00538000 PIR:T47638
RefSeq:NP_191039.2 UniGene:At.1218 UniGene:At.48768
ProteinModelPortal:Q8GWV5 SMR:Q8GWV5 PaxDb:Q8GWV5 PRIDE:Q8GWV5
EnsemblPlants:AT3G54790.1 GeneID:824644 KEGG:ath:AT3G54790
TAIR:At3g54790 eggNOG:NOG259040 InParanoid:Q8GWV5 OMA:LSHFRNQ
PhylomeDB:Q8GWV5 ProtClustDB:CLSN2680413 Genevestigator:Q8GWV5
Uniprot:Q8GWV5
Length = 760
Score = 158 (60.7 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 80/343 (23%), Positives = 152/343 (44%)
Query: 33 FVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTDLNPSIA 92
F CPL+ ++M DPV + +GQTF+R +I+KW +NG VCP T++ L +L P+
Sbjct: 242 FRCPLSTELMLDPVIVASGQTFDRTSIKKWL----DNGLA-VCPRTRQVLTHQELIPNYT 296
Query: 93 LRNTIEEWNARNEAAQLDMARKSLN-LGSSESDIMPALKYVQYFCQSSRSNKHVVHNSEL 151
++ I W EA ++++A S + ++ M Q F + S + + +S L
Sbjct: 297 VKAMIASWL---EANRINLATNSCHQYDGGDASSMANNMGSQDF-NRTESFRFSLRSSSL 352
Query: 152 IPMIIDMLKSSSRKVRCTALETLRIVVEEDD-DNKEILGQGDTVRTIVKFLSHELSRERE 210
+ K++ +L + D + E+L G + +H S
Sbjct: 353 TSRSSLETGNGFEKLKINVSASLCGESQSKDLEIFELLSPGQSY-------THSRSESVC 405
Query: 211 EAVSLL-YELSKSEALCEKIGSINGAILILVGMTSSKSENLLTVEKAEKTL-ANLEKCEN 268
VS + Y S + +G+ + + S N+ A KT ++ ++
Sbjct: 406 SVVSSVDYVPSVTHETESILGNHQSSSEMSPKKNLESSNNVNHEHSAAKTYECSVHDLDD 465
Query: 269 NVRQMAENGRLQPLLTQILEGPQETKLSLAAFLGDLALNS-DVKVLVARTVG-SCLINIM 326
+ M + ++ L+ + G + K + AA + L +NS + +V + R + L++++
Sbjct: 466 S-GTMTTSHTIK-LVEDLKSGSNKVKTAAAAEIRHLTINSIENRVHIGRCGAITPLLSLL 523
Query: 327 KSGNMQAREAALKALNQISSCEPSAKVLIHAGILPPLVKDLFT 369
S +E A+ AL +S E + +++ G + PLV L T
Sbjct: 524 YSEEKLTQEHAVTALLNLSISELNKAMIVEVGAIEPLVHVLNT 566
Score = 46 (21.3 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 27/120 (22%), Positives = 56/120 (46%)
Query: 680 LLEGHAVEKLIALLDHTNEKVVEASLAALSTVIDDGVDIEQGVMVLCEAQGIKPILDVLL 739
+++ AV+ L+ LLD E +V+ ++A L+ + G +G + GI P+L +
Sbjct: 634 IVQAKAVKYLVELLDPDLE-MVDKAVALLANLSAVG----EGRQAIVREGGI-PLLVETV 687
Query: 740 EKRTENLQRRAVWVVERI-LRTDDIAYEVSGDPNVSTALVDAFQHADYRTRQIAERALKH 798
+ ++ + A V+ ++ L + V + + LV Q R ++ A++ L H
Sbjct: 688 DLGSQRGKENAASVLLQLCLNSPKFCTLVLQEGAIPP-LVALSQSGTQRAKEKAQQLLSH 746
>TAIR|locus:2098816 [details] [associations]
symbol:AT3G61390 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002686 GenomeReviews:BA000014_GR
EMBL:AL132962 EMBL:AL137898 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151
HSSP:Q8VZ40 EMBL:AK117154 EMBL:BT005367 IPI:IPI00525308 PIR:T47931
RefSeq:NP_191698.2 UniGene:At.34291 ProteinModelPortal:Q8GZ84
SMR:Q8GZ84 EnsemblPlants:AT3G61390.2 GeneID:825311
KEGG:ath:AT3G61390 TAIR:At3g61390 eggNOG:NOG327619
HOGENOM:HOG000115794 InParanoid:Q8GZ84 OMA:QITESYT PhylomeDB:Q8GZ84
ProtClustDB:CLSN2680474 Genevestigator:Q8GZ84 Uniprot:Q8GZ84
Length = 435
Score = 150 (57.9 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 32/76 (42%), Positives = 44/76 (57%)
Query: 25 HIEPIYDAFVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRS 84
H EP F+CP+T +M DP +G T+E EAI +WF E G + P+ K L
Sbjct: 350 HREPP-QYFICPITHDIMEDPHVAADGFTYEGEAISRWF----ERGHE-TSPMINKRLPH 403
Query: 85 TDLNPSIALRNTIEEW 100
T L P++ALR+ I+EW
Sbjct: 404 TSLVPNLALRSAIQEW 419
>TAIR|locus:2152049 [details] [associations]
symbol:AT5G65920 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AL021684 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB018108
HSSP:Q8VZ40 HOGENOM:HOG000077474 ProtClustDB:CLSN2686657
EMBL:AY062476 EMBL:AY093259 IPI:IPI00534056 PIR:T05882
RefSeq:NP_201393.1 UniGene:At.27331 UniGene:At.74058
ProteinModelPortal:Q9FHN9 SMR:Q9FHN9 EnsemblPlants:AT5G65920.1
GeneID:836721 KEGG:ath:AT5G65920 TAIR:At5g65920 eggNOG:NOG268350
InParanoid:Q9FHN9 OMA:CKLASEE PhylomeDB:Q9FHN9
Genevestigator:Q9FHN9 Uniprot:Q9FHN9
Length = 444
Score = 150 (57.9 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 97/400 (24%), Positives = 162/400 (40%)
Query: 24 LHIEPIYDAFVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELR 83
L + I F+CP++ + M+DPVTL GQT+ER I KWF N CP T +EL
Sbjct: 55 LELPEIPSVFICPISLEPMQDPVTLCTGQTYERSNILKWF-----NIGHCTCPTTMQELW 109
Query: 84 STDLNPSIALRNTIEEW--------NARNEAAQ------LDMARKSLNLGSSESDIMPAL 129
+ P+ L I W R+E Q L RK+ G ++ + L
Sbjct: 110 DDLVTPNKTLHQLIYTWFSQKYVLMKKRSEDVQGRAIEILGTLRKAK--GKAKVHALSEL 167
Query: 130 KYVQYFCQSSRSNKHVVHNSELIPMIIDMLKS--SSRKVRCTALETLRIVVEEDDDNKEI 187
K Q + + K VV + +I L S +S V A+ L + +E D D+K
Sbjct: 168 K--QVVMAHAIAKKTVVDEGGVF--VISSLLSPFTSHAVGSEAIAIL-VNLELDSDSKAG 222
Query: 188 LGQGDTVRTIVKFLSHELSREREEAVSLLYELSKSEALCEKIGSINGAILILVGMTSSKS 247
L Q V +V L+ + L+ L + + ++ S + ++ L+ + +
Sbjct: 223 LMQPARVSLMVDMLNDGSIETKINCARLIGRLVEEKGFRAELVSSHSLLVGLMRLVKDRR 282
Query: 248 ENLLTVEKAEKTLANLEKCENNVRQMAENGRLQPLLTQILEGPQETKLSLAAFLGD-LAL 306
V A TL VR + P L +L L A F+ D L L
Sbjct: 283 RRN-GVSPA-LTLLKSVSVHKQVRNLLVRIGAVPQLVDVLPCLDVECLESALFVLDSLCL 340
Query: 307 NSDVKVLVARTVGSC--LINIMKSGNMQAREAALKALNQIS--SCEPSAKVLIHAGILPP 362
S+ ++ + +V + + ++ + + A+ L + + E + + + G+
Sbjct: 341 ESEGRIALKDSVNTIPHTVRLLMKVSEKCTNYAISILWSVCKLASEECSSLAVEVGLAAK 400
Query: 363 LVKDLFTVGSNHLPMRLKEVSATILANVVNSGHDFDSITV 402
L L + S P LK+ SA +L + S H DS+ +
Sbjct: 401 L---LLVIQSGCDPA-LKQRSAELLK--LCSLHYSDSMFI 434
>TAIR|locus:2093974 [details] [associations]
symbol:PUB29 "plant U-box 29" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA;IDA] [GO:0010200 "response to chitin"
evidence=IEP] [GO:0070696 "transmembrane receptor protein
serine/threonine kinase binding" evidence=IPI] [GO:0009506
"plasmodesma" evidence=IDA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143
GO:GO:0009506 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
EMBL:AB026654 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000238505
ProtClustDB:CLSN2684525 EMBL:AK117976 EMBL:BT005359 IPI:IPI00545400
RefSeq:NP_188501.1 UniGene:At.38506 ProteinModelPortal:Q9LSA6
SMR:Q9LSA6 IntAct:Q9LSA6 ProMEX:Q9LSA6 EnsemblPlants:AT3G18710.1
GeneID:821402 KEGG:ath:AT3G18710 TAIR:At3g18710 eggNOG:NOG292721
InParanoid:Q9LSA6 OMA:YITVPSF PhylomeDB:Q9LSA6
Genevestigator:Q9LSA6 Uniprot:Q9LSA6
Length = 415
Score = 146 (56.5 bits), Expect = 9.4e-07, P = 9.4e-07
Identities = 75/343 (21%), Positives = 148/343 (43%)
Query: 33 FVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTDLNPSIA 92
F CP++ VMR PV+L G T++R +I++W +G CP T + L++ D P++
Sbjct: 16 FKCPISLDVMRSPVSLCTGVTYDRASIQRWL-----DGGNNTCPATMQLLKTKDFVPNLT 70
Query: 93 LRNTIEEWN---AR---------NEAAQLDMARKS-LNLGSSESDIMPALKYVQYFCQSS 139
L+ I W+ R N + ++ K +N+ + L + F + S
Sbjct: 71 LQRLINIWSDSIGRRHNGDSPVLNPPSGREVPTKEEVNVLLERLMSLENLMKIVRFVKDS 130
Query: 140 RSNKHVVHNS-ELIPMIIDMLKSSSRKVRCT--ALETL-RIVVEEDDDNKEILGQ--GDT 193
SN+ + E +PM++D++++ K+ A+ L I V+ + + +L GD
Sbjct: 131 DSNREFLSKKMEFVPMLVDIIRTKKTKIELVIMAIRILDSIKVDRERLSNLMLANDGGDC 190
Query: 194 VRTIVKFLSHELSREREEAVSLLYELSKSEALCEKIGSINGAIL-ILVGMTSSKSENLLT 252
+ I+ + + E+V +L +S I +G + ++ ++ ++S +
Sbjct: 191 LTAILLAIQRGNLESKIESVRVLDWISFDAKSKLMIAERDGVLTEMMKSISITESSDPSL 250
Query: 253 VEKAEKTLANLEKCENNVRQMAENGRLQPLLTQILEGPQETKLSLAAFLGDLALNSDVKV 312
+E + L + K + VR + + IL ET ++A L L ++
Sbjct: 251 IEASLSFLITISKSKR-VRSKLIAAKAITKIKDILL--TETLTNVAVTEKSLKL---LET 304
Query: 313 LVARTVGSCLINIMKSGNMQAREAALKALNQISSCEPSAKVLI 355
L ++ G + I N + E +K L ++S+ V I
Sbjct: 305 LSSKREGR--LEICGDDNGRCVEGVVKKLLKVSTTATEHAVTI 345
>TAIR|locus:2144846 [details] [associations]
symbol:AT5G09800 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0010200 "response to chitin" evidence=IEP;RCA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002688 GenomeReviews:BA000015_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AB020752 EMBL:AL353994 HSSP:Q8VZ40 HOGENOM:HOG000238505
eggNOG:NOG315056 ProtClustDB:CLSN2684525 EMBL:BT010883
EMBL:AK175195 EMBL:AK176549 IPI:IPI00520675 PIR:T49918
RefSeq:NP_196542.1 UniGene:At.32456 ProteinModelPortal:Q9LXE3
SMR:Q9LXE3 IntAct:Q9LXE3 EnsemblPlants:AT5G09800.1 GeneID:830840
KEGG:ath:AT5G09800 TAIR:At5g09800 InParanoid:Q9LXE3 OMA:RSEICDG
PhylomeDB:Q9LXE3 Genevestigator:Q9LXE3 Uniprot:Q9LXE3
Length = 409
Score = 142 (55.0 bits), Expect = 9.5e-07, Sum P(2) = 9.5e-07
Identities = 37/148 (25%), Positives = 72/148 (48%)
Query: 24 LHIEPIYDAFVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELR 83
L+I + F CP++ VM+ PV+L G T++R +I++W ++G CP T + L+
Sbjct: 6 LYITTVPCFFKCPISLDVMKSPVSLSTGVTYDRVSIQRWL----DDGNN-TCPATMQILQ 60
Query: 84 STDLNPSIALRNTIEEWN------ARNEAAQLDM-ARKSLNLGSSESDIM-PALKYVQYF 135
+ + P++ L I+ W+ A +E+ + D R +N I A + F
Sbjct: 61 NKEFVPNLTLHRLIDHWSDSINRRADSESPESDTPTRDEINAAIERFRIENDARSKILRF 120
Query: 136 CQSSRSNKH-VVHNSELIPMIIDMLKSS 162
+ S N+ + + + M++D++ S
Sbjct: 121 ARESDENREFLAGKDDFVAMLVDLISDS 148
Score = 49 (22.3 bits), Expect = 9.5e-07, Sum P(2) = 9.5e-07
Identities = 48/210 (22%), Positives = 89/210 (42%)
Query: 180 EDDDNKEIL-GQGDTVRTIVKFLSHELSREREEAVSLLY-ELSKSEALCE-KIGSING-A 235
E D+N+E L G+ D V +V +S SR ++ LL E K ++ KI +
Sbjct: 123 ESDENREFLAGKDDFVAMLVDLISD--SRNFSDSQLLLVGEAVKILSMIRRKIFDRRRLS 180
Query: 236 ILILVGMTSSKSENLLTVEKAEKTL-----ANLEKCENNVRQMAENGRLQPLLTQILE-- 288
LIL + L +++ L A LE + + + L+T+I++
Sbjct: 181 NLILTNGGDCLTSFFLLIKRGNPKLKIDCSAVLEFIAVDAESKLIIAKGEGLVTEIIKLI 240
Query: 289 -GPQETKLSLA--AFLGDLALNSDVKV-LVARTVGSCLINIMK--SGNMQAREAALKALN 342
++ L A + L +A + VK+ L+ + + L +++ + ++ E LK L
Sbjct: 241 SSDSDSSLIEANLSLLIAIASSKRVKLALIREKLVTKLTSLLTDPTTSVSVTEKCLKLLE 300
Query: 343 QISSCEPSAKVLIHAGILPPLVKDLFTVGS 372
ISSC+ + + +V L V +
Sbjct: 301 AISSCKEGRSEICDGVCVETVVNKLMKVST 330
>TAIR|locus:2181077 [details] [associations]
symbol:SAUR21 "SMALL AUXIN UP RNA 21" species:3702
"Arabidopsis thaliana" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AL162351
HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:BT015367 EMBL:BT015725
EMBL:AK229397 IPI:IPI00524109 PIR:T48204 RefSeq:NP_195803.1
UniGene:At.33496 ProteinModelPortal:Q9LZW3 SMR:Q9LZW3 PRIDE:Q9LZW3
EnsemblPlants:AT5G01830.1 GeneID:831850 KEGG:ath:AT5G01830
TAIR:At5g01830 eggNOG:NOG307369 InParanoid:Q9LZW3 OMA:IPADFRC
PhylomeDB:Q9LZW3 ProtClustDB:CLSN2687143 Genevestigator:Q9LZW3
Uniprot:Q9LZW3
Length = 674
Score = 149 (57.5 bits), Expect = 9.8e-07, P = 9.8e-07
Identities = 76/347 (21%), Positives = 146/347 (42%)
Query: 33 FVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTDLNPSIA 92
F CP+T ++MRDPV + GQT++RE+I+ W ++G CP T + L+ T L P+ A
Sbjct: 278 FRCPITLELMRDPVVVATGQTYDRESIDLWI----QSGHN-TCPKTGQVLKHTSLVPNRA 332
Query: 93 LRNTIEEWNARNEAAQLDM----------ARKSLNLGS----------SESDIMPALKYV 132
L+N I W R++ ++ ++++ S +D + +
Sbjct: 333 LKNLIVLW-CRDQKIPFELYGDGGGEPAPCKEAVEFTKMMVSFLIEKLSVADSNGVVFEL 391
Query: 133 QYFCQSSRSNKHVVHNSELIPMIIDMLKSSSRKVRCTALET-LRIVVEEDDDNKEILGQG 191
+ +S + + + IP ++ L + ++ A+ T L + + E + + I+
Sbjct: 392 RALAKSDTVARACIAEAGAIPKLVRYLATECPSLQINAVTTILNLSILEQNKTR-IMETD 450
Query: 192 DTVRTIVKFLSHELSRE-REEAVSLLYELSKSEALCEKIGSINGAILILVGMTSSKSENL 250
+ +++ L + E + A + L+ L+ A ++G + LV + +K
Sbjct: 451 GALNGVIEVLRSGATWEAKANAAATLFSLAGVSAYRRRLGRKARVVSGLVDL--AKQGPT 508
Query: 251 LTVEKAEKTLANLEKCENNVRQMAENGRLQPLLTQILEGPQETKLSLAAFL--GDLALNS 308
+ A + NL NV + E G + E P+E + A + G L S
Sbjct: 509 SSKRDALVAILNLVAERENVGRFVEAGVMGAAGDAFQELPEEAVAVVEAVVRRGGLMAVS 568
Query: 309 DVKVLVARTVGSCLINIMKSGNMQAREAALKALNQISSCEPSAKVLI 355
L+ R +G +M+ G RE+A L ++ C L+
Sbjct: 569 AAFSLI-RLLGE----VMREGADTTRESAAATL--VTMCRKGGSELV 608
>ASPGD|ASPL0000008980 [details] [associations]
symbol:AN12408 species:162425 "Emericella nidulans"
[GO:0000329 "fungal-type vacuole membrane" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0000011 "vacuole inheritance"
evidence=IEA] InterPro:IPR000225 InterPro:IPR016024
InterPro:IPR026958 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0000329
EMBL:BN001301 GO:GO:0000011 GO:GO:0016236 GO:GO:0042144
PANTHER:PTHR23315:SF8 HOGENOM:HOG000177331 OMA:EEIQCHA
GO:GO:0071255 GO:GO:0071563 GO:GO:0071561 GO:GO:0071562
ProteinModelPortal:C8V2Y6 EnsemblFungi:CADANIAT00007711
Uniprot:C8V2Y6
Length = 579
Score = 146 (56.5 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 65/268 (24%), Positives = 126/268 (47%)
Query: 246 KSENLLTVEKAEKTLANLE-KCENNVRQMAENGRLQPLLTQILEGPQETKLSLAAFLGDL 304
+S ++ A L NL +N V +A G L PL+ Q++ E + + + +L
Sbjct: 116 QSSDIEVQRAASAALGNLAVNADNKVLIVALGG-LAPLIKQMMSPNVEVQCNAVGCITNL 174
Query: 305 ALNSDVKVLVARTVGSC--LINIMKSGNMQAREAALKALNQISSCEPSAKVLIHAGILPP 362
A + D K +AR+ G+ LI + KS +M+ + A AL ++ + + + L++AG +P
Sbjct: 175 ATHEDNKAKIARS-GALGPLIRLAKSKDMRVQRNATGALLNMTHSDDNRQQLVNAGAIPV 233
Query: 363 LVKDLFTVGSNHLPMRLKEVSATILANVVNSGHDFDSITVGPDNQTLVSEDIVHNLLHLI 422
LV+ L S+ + ++ T L+N+ + + QT +V +L+HL+
Sbjct: 234 LVQLL---SSSDVDVQY--YCTTALSNIAVDASNRKRLA-----QT--ESRLVQSLVHLM 281
Query: 423 SNTGPTIECKLLQXXXXXXXXXXXXXXXXXAIKSSGATISLVQFVEAPQNDLRLASIELI 482
++ P ++C Q +++ G L++ +++ L L+++ I
Sbjct: 282 DSSTPKVQC---QAALALRNLASDEKYQLEIVRAKGLP-PLLRLLQSSYLPLILSAVACI 337
Query: 483 QNLSPHMGHE--LADA--LRGAVGQLGS 506
+N+S H +E + DA L+ V LGS
Sbjct: 338 RNISIHPLNESPIIDAGFLKPLVDLLGS 365
Score = 118 (46.6 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 48/185 (25%), Positives = 93/185 (50%)
Query: 247 SENLLTVEKAEKTLANLEKCENNVRQMAENGRLQPLLTQILEGPQETKLSLAAFLGDLAL 306
S+N+ A T A + E +VR++ + L+P+L + E + + +A LG+LA+
Sbjct: 79 SDNVDLQRSASLTFAEIT--ERDVREV-DRDTLEPILFLLQSSDIEVQRAASAALGNLAV 135
Query: 307 NSDVKVLVARTVGSC-LINIMKSGNMQAREAALKALNQISSCEPSAKVLIHAGILPPLVK 365
N+D KVL+ G LI M S N++ + A+ + +++ E + + +G L PL++
Sbjct: 136 NADNKVLIVALGGLAPLIKQMMSPNVEVQCNAVGCITNLATHEDNKAKIARSGALGPLIR 195
Query: 366 DLFTVGSNHLPMRLKEVSATILANVVNSGHDFDSITVGPDNQTLVSEDIVHNLLHLISNT 425
L + MR++ +AT ++N H D+ Q LV+ + L+ L+S++
Sbjct: 196 -L----AKSKDMRVQR-NAT--GALLNMTHSDDN------RQQLVNAGAIPVLVQLLSSS 241
Query: 426 GPTIE 430
++
Sbjct: 242 DVDVQ 246
Score = 78 (32.5 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 33/160 (20%), Positives = 74/160 (46%)
Query: 605 LFIELLQSNGLDKVQMVSATALENLSLESKNLTKLPELPPSGFCASIFPCFSKQPVITGL 664
+ ++LL S+ +D VQ TAL N+++++ N +L + + + S P +
Sbjct: 233 VLVQLLSSSDVD-VQYYCTTALSNIAVDASNRKRLAQTESRLVQSLVHLMDSSTPKVQCQ 291
Query: 665 CRLH-RGLCS-LKETFCLLEGHAVEKLIALLDHTNEKVVEASLAALSTVIDDGVDIEQGV 722
L R L S K ++ + L+ LL + ++ +++A + + ++ E +
Sbjct: 292 AALALRNLASDEKYQLEIVRAKGLPPLLRLLQSSYLPLILSAVACIRNISIHPLN-ESPI 350
Query: 723 MVLCEAQGIKPILDVLLEKRTENLQRRAVWVVERILRTDD 762
+ +A +KP++D+L E +Q A+ + + + D
Sbjct: 351 I---DAGFLKPLVDLLGSTDNEEIQCHAISTLRNLAASSD 387
Score = 45 (20.9 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 34/160 (21%), Positives = 62/160 (38%)
Query: 607 IELLQSNGLDKVQMVSATALENLSLESKNLTKLPELPPSGFCASIFPCFSKQPV-ITGLC 665
++LL S +++Q + + L NL+ S +L + +G + PV +
Sbjct: 360 VDLLGSTDNEEIQCHAISTLRNLAASSDRNKEL--VLQAGAVQKCKDLVLRVPVTVQSEM 417
Query: 666 RLHRGLCSLKETFC--LLEGHAVEKLIALLDHTNEKVVEASLAALSTVIDDGVDIEQGVM 723
+ +L + LL + LI L + + +V S AAL + D V
Sbjct: 418 TAAIAVLALSDELKPHLLSLGVFDVLIPLTESDSIEVQGNSAAALGNLSSKVGDYSIFVR 477
Query: 724 VLCEAQG-IKPILDVLLEKRTENLQRRAVWVVERILRTDD 762
+ G I L L Q A+W + ++L ++D
Sbjct: 478 DWADPNGGIHGYLKRFLASGDPTFQHIAIWTLLQLLESED 517
>TAIR|locus:504954932 [details] [associations]
symbol:AT5G57035 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR006016
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 Pfam:PF00582 Pfam:PF04564 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504 GO:GO:0005524
EMBL:CP002688 GO:GO:0006950 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 IPI:IPI00538382
RefSeq:NP_680448.2 UniGene:At.23555 UniGene:At.45477
ProteinModelPortal:F4K964 SMR:F4K964 EnsemblPlants:AT5G57035.1
GeneID:835807 KEGG:ath:AT5G57035 OMA:EYQRTGT PhylomeDB:F4K964
Uniprot:F4K964
Length = 789
Score = 149 (57.5 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 32/88 (36%), Positives = 55/88 (62%)
Query: 33 FVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTDLNPSIA 92
+ CP+ K++M DP +G T+ER+AI++W ++ ++ V P+T+ L+ +DL P+
Sbjct: 712 YYCPILKEIMEDPQIAADGFTYERKAIKEWIQKHQD-----VSPVTKHRLKHSDLTPNHT 766
Query: 93 LRNTIEEWNARNEAAQLDMARKSLNLGS 120
LR+ I EW +R+ +LD+ S LGS
Sbjct: 767 LRSAIREWRSRS---RLDL---STTLGS 788
>ZFIN|ZDB-GENE-061110-97 [details] [associations]
symbol:zgc:154085 "zgc:154085" species:7955 "Danio
rerio" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 ZFIN:ZDB-GENE-061110-97 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 EMBL:CABZ01026183 EMBL:CABZ01026184 EMBL:CABZ01048063
EMBL:CABZ01048064 EMBL:FP236277 IPI:IPI00993801
Ensembl:ENSDART00000128024 ArrayExpress:E7F9P4 Bgee:E7F9P4
Uniprot:E7F9P4
Length = 487
Score = 145 (56.1 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 30/84 (35%), Positives = 48/84 (57%)
Query: 22 ERLHIEPIY----DAFVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPL 77
E L + P+Y D F+CP+T+++M+DPV +G ++EREAIE W + P+
Sbjct: 406 EELKMVPVYNGTPDEFLCPITREIMKDPVIAADGYSYEREAIEAWIST-----KNRTSPM 460
Query: 78 TQKELRSTDLNPSIALRNTIEEWN 101
T L++T L P+ L+ I W+
Sbjct: 461 TNLPLQTTLLTPNRTLKMAIFRWS 484
>TAIR|locus:2178818 [details] [associations]
symbol:AT5G58680 "AT5G58680" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009693 "ethylene
biosynthetic process" evidence=RCA] InterPro:IPR000225
InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
EMBL:CP002688 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:AY084344 EMBL:DQ447090 IPI:IPI00540553 RefSeq:NP_200676.1
UniGene:At.29268 ProteinModelPortal:Q8LGC7 SMR:Q8LGC7
EnsemblPlants:AT5G58680.1 GeneID:835982 KEGG:ath:AT5G58680
TAIR:At5g58680 HOGENOM:HOG000084464 InParanoid:Q8LGC7 OMA:LCSTNEN
PhylomeDB:Q8LGC7 ProtClustDB:CLSN2686276 Genevestigator:Q8LGC7
Uniprot:Q8LGC7
Length = 357
Score = 148 (57.2 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 47/177 (26%), Positives = 87/177 (49%)
Query: 192 DTVRTIVKFLSHELS-REREEAVSLLYELSKSEALCE-KIGSINGAILILVGMTSSKSEN 249
D +R ++ L S E+++A + LSK++ K+ GAI LV + SS +
Sbjct: 60 DVIRNLITHLESSSSIEEQKQAAMEIRLLSKNKPENRIKLAKA-GAIKPLVSLISSS--D 116
Query: 250 LLTVEKAEKTLANLEKCENNVRQMAENGRLQPLLTQILEGPQETKLSLAAFLGDLALNSD 309
L E + NL C+ N + +G ++PL+ + G TK + A L L+ +
Sbjct: 117 LQLQEYGVTAVLNLSLCDENKEMIVSSGAVKPLVNALRLGTPTTKENAACALLRLSQVEE 176
Query: 310 VKVLVARTVG-SCLINIMKSGNMQAREAALKALNQISSCEPSAKVLIHAGILPPLVK 365
K+ + R+ L+N++++G +A++ A AL + S + + +GI+ PLV+
Sbjct: 177 NKITIGRSGAIPLLVNLLENGGFRAKKDASTALYSLCSTNENKTRAVESGIMKPLVE 233
Score = 138 (53.6 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 69/297 (23%), Positives = 136/297 (45%)
Query: 76 PLTQKELRSTDLNPSIALRNTIEEWNARNEAAQLDMARKSLNLGSSESDIMPALKYVQYF 135
P T E R L S A+ N+ + RN L+ + S E A++ ++
Sbjct: 38 PTTTSESRQRKLFLSCAVDNSDDV--IRNLITHLESS------SSIEEQKQAAME-IRLL 88
Query: 136 CQSSRSNKHVVHNSELIPMIIDMLKSSSRKVR---CTALETLRIVVEEDDDNKEILGQGD 192
++ N+ + + I ++ ++ SS +++ TA+ L + D+NKE++
Sbjct: 89 SKNKPENRIKLAKAGAIKPLVSLISSSDLQLQEYGVTAVLNLSLC----DENKEMIVSSG 144
Query: 193 TVRTIVKFLSHELSREREEAVSLLYELSKSEALCEKIGSINGAILILVGMTSSKSENLLT 252
V+ +V L +E A L LS+ E IG +GAI +LV + ++
Sbjct: 145 AVKPLVNALRLGTPTTKENAACALLRLSQVEENKITIGR-SGAIPLLVNLL--ENGGFRA 201
Query: 253 VEKAEKTLANLEKCENNVRQMAENGRLQPLLTQILEGPQETKLSLAAFLGDLALNS-DVK 311
+ A L +L N + E+G ++PL+ +++ + + +AF+ +L +++ + K
Sbjct: 202 KKDASTALYSLCSTNENKTRAVESGIMKPLVELMIDFESDM-VDKSAFVMNLLMSAPESK 260
Query: 312 VLVARTVG-SCLINIMKSGNMQAREAALKALNQISSCEPSA--KVLI-HAGILPPLV 364
V G L+ I+++G + +E ++ L Q+ CE S + ++ G +PPLV
Sbjct: 261 PAVVEEGGVPVLVEIVEAGTQRQKEISVSILLQL--CEESVVYRTMVAREGAVPPLV 315
Score = 37 (18.1 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 10/46 (21%), Positives = 22/46 (47%)
Query: 502 GQLGSLIRVISENVGISKEQAAAVGLLAELPERDLGLTRQMLDEGA 547
G + L+ ++ G +++ +V +L +L E + + EGA
Sbjct: 267 GGVPVLVEIVE--AGTQRQKEISVSILLQLCEESVVYRTMVAREGA 310
>TAIR|locus:2150295 [details] [associations]
symbol:ARIA "ARM repeat protein interacting with ABF2"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005515
"protein binding" evidence=IPI] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009651 "response to salt stress" evidence=IEP]
[GO:0009737 "response to abscisic acid stimulus" evidence=IEP;IMP]
[GO:0010187 "negative regulation of seed germination" evidence=IMP]
[GO:0000956 "nuclear-transcribed mRNA catabolic process"
evidence=RCA] InterPro:IPR000225 InterPro:IPR000210
InterPro:IPR013069 InterPro:IPR016024 Pfam:PF00514 Pfam:PF00651
PROSITE:PS50097 PROSITE:PS50176 SMART:SM00185 SMART:SM00225
UniPathway:UPA00143 GO:GO:0005886 GO:GO:0009737 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0009651 EMBL:AF296837
eggNOG:COG5064 HOGENOM:HOG000030229 GO:GO:0016567
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0010187
EMBL:AY058878 EMBL:AK317640 EMBL:AK220904 IPI:IPI00546696
RefSeq:NP_850852.1 UniGene:At.20128 ProteinModelPortal:B9DHT4
SMR:B9DHT4 STRING:B9DHT4 PaxDb:B9DHT4 PRIDE:B9DHT4
EnsemblPlants:AT5G19330.1 GeneID:832053 KEGG:ath:AT5G19330
TAIR:At5g19330 OMA:SEAFHAM PhylomeDB:B9DHT4 ArrayExpress:B9DHT4
Genevestigator:B9DHT4 Uniprot:B9DHT4
Length = 710
Score = 146 (56.5 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 54/222 (24%), Positives = 106/222 (47%)
Query: 152 IPMIIDMLKSSSRKVRCTALETLRIVVEEDDDNKEILGQGDTVRTIVKFLSHELSREREE 211
IP ++++L+ S KV+ A LR + ++DDNK + + + + T++ L E + E
Sbjct: 200 IPPLVELLEFSDSKVQRAAAGALRTLAFKNDDNKNQIVECNALPTLILMLGSEDAAIHYE 259
Query: 212 AVSLLYELSKSEALCEKIGSINGAILILVGMTSSKSENLLTVEKAEKTLANLEKCENNVR 271
AV ++ L S +K GA+ ++G+ SS + +A L +++ +
Sbjct: 260 AVGVIGNLVHSSPHIKKEVLTAGALQPVIGLLSSCCPE--SQREAALLLGQFASTDSDCK 317
Query: 272 -QMAENGRLQPLLTQILEGPQETKLSLAAF-LGDLALNSDVKVLVARTVG-SCLINIMKS 328
+ + G ++PL+ ++L+ P ++AF LG LA ++ + +A + G L+ ++ S
Sbjct: 318 VHIVQRGAVRPLI-EMLQSPDVQLKEMSAFALGRLAQDAHNQAGIAHSGGLGPLLKLLDS 376
Query: 329 GNMQAREAALKALNQISSCEPSAKVLIHAGILPPLVKDLFTV 370
N + A AL ++ E + I G + L F V
Sbjct: 377 RNGSLQHNAAFALYGLADNEDNVSDFIRVGGIQKLQDGEFIV 418
>TAIR|locus:505006475 [details] [associations]
symbol:IMPA-2 "importin alpha isoform 2" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM;IEA] [GO:0006606 "protein
import into nucleus" evidence=IEA;ISS] [GO:0006886 "intracellular
protein transport" evidence=ISS] [GO:0008565 "protein transporter
activity" evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0009407 "toxin catabolic process" evidence=RCA]
InterPro:IPR000225 InterPro:IPR002652 InterPro:IPR016024
InterPro:IPR024931 Pfam:PF00514 Pfam:PF01749 PIRSF:PIRSF005673
PROSITE:PS50176 PROSITE:PS51214 SMART:SM00185
EnsemblPlants:AT4G16143.1 GO:GO:0005829 GO:GO:0009506 EMBL:CP002687
SUPFAM:SSF48371 GO:GO:0005730 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0008565 GO:GO:0006606 OMA:MQTKTVI IPI:IPI00534241
RefSeq:NP_001154239.1 RefSeq:NP_567485.4 UniGene:At.21119
ProteinModelPortal:F4JL11 SMR:F4JL11 PRIDE:F4JL11
EnsemblPlants:AT4G16143.2 GeneID:827302 KEGG:ath:AT4G16143
Uniprot:F4JL11
Length = 535
Score = 102 (41.0 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 73/338 (21%), Positives = 145/338 (42%)
Query: 98 EEWNARNEAAQLDM--ARKSLNLGSSESDIMPALKYVQYFCQSSRSNKHVVHNSELIPMI 155
EE R E +++ +++ +L + + A + Q+ ++ V E +P +
Sbjct: 23 EEGRRRREDNMVEIRKSKREESLQKKRREGLQANQLPQFAPSPVPASSTVEKKLESLPAM 82
Query: 156 IDMLKSSSRKVRCTALETLR--IVVEEDDDNKEILGQGDTVRTIVKFLSHELSRERE-EA 212
+ + S R ++ A R + +E +E++ G V V+FL+ E + + EA
Sbjct: 83 VGGVWSDDRSLQLEATTQFRKLLSIERSPPIEEVIDAG-VVPRFVEFLTREDYPQLQFEA 141
Query: 213 VSLLYELSKSEALCEKIGSINGAILILVGMTSSKSENLLTVEKAEKTLANLEKCENNVRQ 272
L ++ + K+ +GA+ I V + +S+S+++ E+A L N+ R
Sbjct: 142 AWALTNIASGTSENTKVVIEHGAVPIFVQLLASQSDDVR--EQAVWALGNVAGDSPRCRD 199
Query: 273 MA-ENGRLQPLLTQILEGPQETKLSLAAF-LGDLALNSDVKVL-VARTVGSCLINIMKSG 329
+ G L PLL+Q+ E + + L A + L + R L ++ S
Sbjct: 200 LVLGQGALIPLLSQLNEHAKLSMLRNATWTLSNFCRGKPQPPFDQVRPALPALERLIHST 259
Query: 330 NMQAREAALKALNQISS-CEPSAKVLIHAGILPPLVKDLFTVGSNHLPMRLKEVSATILA 388
+ + A AL+ +S + +I AG++P LV+ L+ S ++L
Sbjct: 260 DEEVLTDACWALSYLSDGTNDKIQSVIEAGVVPRLVE------------LLQHQSPSVLI 307
Query: 389 NVVNSGHDFDSITVGPDNQT--LVSEDIVHNLLHLISN 424
+ S +I G D QT ++S + +LL L+++
Sbjct: 308 PALRS---IGNIVTGDDLQTQCVISHGALLSLLSLLTH 342
Score = 91 (37.1 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 34/141 (24%), Positives = 64/141 (45%)
Query: 676 ETFCLLEGHAVEKLIALLDHTNEKVVEASLAALSTVIDDGVDIEQGVMVLCEAQGIKPIL 735
+T C++ A+ L++LL H ++K ++ + I G + +Q + +CEA I P++
Sbjct: 323 QTQCVISHGALLSLLSLLTHNHKKSIKKEACWTISNITAG-NRDQ-IQAVCEAGLICPLV 380
Query: 736 DVLLEKRTENLQRRAVWVVERILR---TDDIAYEVSGDPNVSTALVDAFQHADYRTRQIA 792
+ LL+ ++++ A W + D I Y V + V L D D R +
Sbjct: 381 N-LLQNAEFDIKKEAAWAISNATSGGSPDQIKYMV--EQGVVKPLCDLLVCPDPRIITVC 437
Query: 793 ERALKHIDKIPNFSGIFPNMG 813
L++I K+ + N G
Sbjct: 438 LEGLENILKVGEAEKVTGNTG 458
>TAIR|locus:2179842 [details] [associations]
symbol:ABAP1 "ARMADILLO BTB protein 1" species:3702
"Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=ISM]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006261 "DNA-dependent DNA replication"
evidence=TAS] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] [GO:0031261 "DNA replication
preinitiation complex" evidence=IDA] [GO:0042127 "regulation of
cell proliferation" evidence=IMP] [GO:2000104 "negative regulation
of DNA-dependent DNA replication" evidence=IMP] InterPro:IPR000225
InterPro:IPR000210 InterPro:IPR013069 InterPro:IPR016024
Pfam:PF00514 Pfam:PF00651 PROSITE:PS50097 PROSITE:PS50176
SMART:SM00185 SMART:SM00225 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0008285 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:FJ422582 EMBL:AL391711
EMBL:AY074524 IPI:IPI00547704 RefSeq:NP_196810.5 UniGene:At.28791
ProteinModelPortal:B7U179 SMR:B7U179 IntAct:B7U179 STRING:B7U179
PRIDE:B7U179 EnsemblPlants:AT5G13060.1 GeneID:831145
KEGG:ath:AT5G13060 TAIR:At5g13060 eggNOG:COG5064
HOGENOM:HOG000030229 InParanoid:Q8RY88 OMA:ASSDIFR PhylomeDB:B7U179
ProtClustDB:CLSN2686776 Genevestigator:B7U179 GO:GO:0031261
GO:GO:0006261 GO:GO:2000104 GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Uniprot:B7U179
Length = 737
Score = 146 (56.5 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 61/224 (27%), Positives = 110/224 (49%)
Query: 152 IPMIIDMLKSSSRKVRCTALETLRIVVEEDDDNKEILGQGDTVRTIVKFLSHELSREREE 211
I ++++L KV+ A LR V +D+NK + + + + T+V L + S E
Sbjct: 227 IAPLVELLNFPDVKVQRAAAGALRTVSFRNDENKSQIVELNALPTLVLMLQSQDSTVHGE 286
Query: 212 AVSLLYELSKSEALCEKIGSINGAILILVGMTSSKSENLLTVEKAEKTLANLEKCENNVR 271
A+ + L S +K GA+ ++G+ SS L T +A + +++ +
Sbjct: 287 AIGAIGNLVHSSPDIKKEVIRAGALQPVIGLLSSTC--LETQREAALLIGQFAAPDSDCK 344
Query: 272 -QMAENGRLQPLLTQILEGPQETKLSLAAF-LGDLALNSDVKVLVARTVGSC-LINIM-- 326
+A+ G + PL+ ++LE E + ++AF LG LA ++ + +A G L+N++
Sbjct: 345 VHIAQRGAITPLI-KMLESSDEQVVEMSAFALGRLAQDAHNQAGIAHRGGIISLLNLLDV 403
Query: 327 KSGNMQAREAALKALNQISSCEPSAKVLIHAGILPPLVKDLFTV 370
K+G++Q AA AL ++ E + I AG + L D FTV
Sbjct: 404 KTGSVQ-HNAAF-ALYGLADNEENVADFIKAGGIQKLQDDNFTV 445
>UNIPROTKB|F1N1K5 [details] [associations]
symbol:KPNA5 "Importin subunit alpha" species:9913 "Bos
taurus" [GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0006606 "protein import into nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000225 InterPro:IPR002652 InterPro:IPR016024
InterPro:IPR024931 Pfam:PF00514 Pfam:PF01749 PIRSF:PIRSF005673
PROSITE:PS50176 PROSITE:PS51214 SMART:SM00185 GO:GO:0005634
GO:GO:0005737 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0008565 GO:GO:0006606 GeneTree:ENSGT00610000085856
EMBL:DAAA02025787 EMBL:DAAA02025786 IPI:IPI00786473
Ensembl:ENSBTAT00000019262 OMA:IFPILIE Uniprot:F1N1K5
Length = 538
Score = 143 (55.4 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 61/213 (28%), Positives = 96/213 (45%)
Query: 596 LCCEHNLAALFIELL-QSNGLDKVQMVSATALENLSLESKNLTKLPELPPSGFCASIFPC 654
L CE + +ELL SN L + + AL NL KN PP F + + PC
Sbjct: 208 LNCE--ILPPLLELLTNSNRLTTTRN-AVWALSNLC-RGKN-------PPPNF-SKVSPC 255
Query: 655 --------FSKQP-VITGLCRLHRGLC--SLKETFCLLEGHAVEKLIALLDHTNEKVVEA 703
FS P V+ +C L S + +++ +L+ LL H + KVV
Sbjct: 256 LNVLSRLLFSSDPDVLADVCWALSYLSDGSNDKIQAVIDSGVCRRLVELLMHNDYKVVSP 315
Query: 704 SLAALSTVIDDGVDIEQGVMVLCEAQGIKPILDVLLEKRTENLQRRAVWVVERILRTDDI 763
+L A+ ++ G DI+ V++ C A P L LL E++++ A W V I +
Sbjct: 316 ALRAVGNIVT-GDDIQTQVILNCSAL---PCLLHLLSSSKESIRKEACWTVSNITAGNRA 371
Query: 764 AYEVSGDPNVSTALVDAFQHADYRTRQIAERAL 796
+ D N+ L++ Q A++RTR+ A A+
Sbjct: 372 QIQAVIDANIFPVLIEILQKAEFRTRKEAAWAI 404
>SGD|S000000739 [details] [associations]
symbol:VAC8 "Phosphorylated and palmitoylated vacuolar
membrane protein" species:4932 "Saccharomyces cerevisiae"
[GO:0042144 "vacuole fusion, non-autophagic" evidence=IMP]
[GO:0043495 "protein anchor" evidence=IMP;IPI] [GO:0071562
"nucleus-vacuole junction assembly" evidence=IMP] [GO:0071561
"nucleus-vacuole junction" evidence=IDA;IPI] [GO:0000011 "vacuole
inheritance" evidence=IEA;IMP] [GO:0071255 "CVT vesicle assembly"
evidence=IMP] [GO:0016236 "macroautophagy" evidence=IMP]
[GO:0034727 "piecemeal microautophagy of nucleus" evidence=IMP]
[GO:0000329 "fungal-type vacuole membrane" evidence=IDA]
[GO:0071563 "Myo2p-Vac17p-Vac8p transport complex"
evidence=IDA;IPI] [GO:0005774 "vacuolar membrane" evidence=IEA]
[GO:0005773 "vacuole" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] InterPro:IPR000225 InterPro:IPR016024
InterPro:IPR026958 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
SGD:S000000739 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
eggNOG:COG5064 GO:GO:0000329 EMBL:BK006939 GO:GO:0043495
GO:GO:0000011 GO:GO:0016236 GeneTree:ENSGT00680000099702
EMBL:U18530 GO:GO:0042144 RefSeq:NP_010907.3 GeneID:856709
KEGG:sce:YEL009C KO:K09464 RefSeq:NP_010903.3 GeneID:856702
KEGG:sce:YEL013W KO:K08332 PANTHER:PTHR23315:SF8
HOGENOM:HOG000177331 OMA:EEIQCHA OrthoDB:EOG4QZBV8 GO:GO:0071255
EMBL:AF005267 PIR:S50446 ProteinModelPortal:P39968 SMR:P39968
DIP:DIP-5121N IntAct:P39968 MINT:MINT-517641 STRING:P39968
PaxDb:P39968 PeptideAtlas:P39968 EnsemblFungi:YEL013W
NextBio:982766 Genevestigator:P39968 GermOnline:YEL013W
GO:GO:0071563 GO:GO:0071561 GO:GO:0071562 Uniprot:P39968
Length = 578
Score = 134 (52.2 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 69/291 (23%), Positives = 123/291 (42%)
Query: 260 LANLEKCENNVRQMAENGRLQPLLTQILEGPQETKLSLAAFLGDLALNSDVKVLVARTVG 319
L NL N + E G L+PL+ Q++ E + + + +LA D K +A T G
Sbjct: 109 LGNLAVNNENKLLIVEMGGLEPLINQMMGDNVEVQCNAVGCITNLATRDDNKHKIA-TSG 167
Query: 320 SC--LINIMKSGNMQAREAALKALNQISSCEPSAKVLIHAGILPPLVKDLFTVGSNHLPM 377
+ L + KS +++ + A AL ++ E + K L++AG +P LV L + +
Sbjct: 168 ALIPLTKLAKSKHIRVQRNATGALLNMTHSEENRKELVNAGAVPVLVSLLSSTDPD---- 223
Query: 378 RLKEVSATILANVVNSGHDFDSITVGPDNQTLVSEDIVHNLLHLISNTGPTIECKLLQXX 437
++ T L+N+ + + QT +V L+ L+ + ++C Q
Sbjct: 224 -VQYYCTTALSNIAVDEANRKKLA-----QT--EPRLVSKLVSLMDSPSSRVKC---QAT 272
Query: 438 XXXXXXXXXXXXXXXAIKSSGATISLVQFVEAPQNDLRLASIELIQNLSPHMGHELADAL 497
+++ G LV+ +++ L LAS+ I+N+S H L + L
Sbjct: 273 LALRNLASDTSYQLEIVRAGGLP-HLVKLIQSDSIPLVLASVACIRNISIH---PLNEGL 328
Query: 498 RGAVGQLGSLIRVISENVGISKE-QAAAVGLLAELPERDLGLTRQMLDEGA 547
G L L+R++ S+E Q AV L L ++ + GA
Sbjct: 329 IVDAGFLKPLVRLLDYKD--SEEIQCHAVSTLRNLAASSEKNRKEFFESGA 377
Score = 131 (51.2 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 70/303 (23%), Positives = 128/303 (42%)
Query: 208 EREEAVSLLYELSKSEALCEKIGSINGAILILVGMTSSKSENLLTVEKAEKTLANLEKCE 267
ERE LL L + L G A+ LV S+NL A LA E E
Sbjct: 24 EREAVTLLLGYLEDKDQLDFYSGGPLKALTTLV-----YSDNLNLQRSA--ALAFAEITE 76
Query: 268 NNVRQMAENGRLQPLLTQILEGPQETKLSLAAFLGDLALNSDVKVLVARTVG-SCLINIM 326
VRQ++ L+P+L + + +++ A LG+LA+N++ K+L+ G LIN M
Sbjct: 77 KYVRQVSREV-LEPILILLQSQDPQIQVAACAALGNLAVNNENKLLIVEMGGLEPLINQM 135
Query: 327 KSGNMQAREAALKALNQISSCEPSAKVLIHAGILPPLVKDLFTVGSNHLPMRLKEVSATI 386
N++ + A+ + +++ + + + +G L PL K S H+ R++ +
Sbjct: 136 MGDNVEVQCNAVGCITNLATRDDNKHKIATSGALIPLTK---LAKSKHI--RVQRNATGA 190
Query: 387 LANVVNSGHDFDSITVGPDNQTLVSEDIVHNLLHLISNTGPTIECKLLQXXXXXXXXXXX 446
L N+ +S + + LV+ V L+ L+S+T P ++
Sbjct: 191 LLNMTHSEEN---------RKELVNAGAVPVLVSLLSSTDPDVQYYC--TTALSNIAVDE 239
Query: 447 XXXXXXAIKSSGATISLVQFVEAPQNDLRLASIELIQNLSPHMGHELADALRGAVGQLGS 506
A LV +++P + ++ + ++NL+ ++L G + L
Sbjct: 240 ANRKKLAQTEPRLVSKLVSLMDSPSSRVKCQATLALRNLASDTSYQLEIVRAGGLPHLVK 299
Query: 507 LIR 509
LI+
Sbjct: 300 LIQ 302
Score = 60 (26.2 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 45/205 (21%), Positives = 85/205 (41%)
Query: 579 VLARVTFV--LSDEPDAIALCCEHNLAALFIELLQSNGLDKVQMVSATALENLSLES-KN 635
VLA V + +S P L + + LL +++Q + + L NL+ S KN
Sbjct: 309 VLASVACIRNISIHPLNEGLIVDAGFLKPLVRLLDYKDSEEIQCHAVSTLRNLAASSEKN 368
Query: 636 LTKLPELPPSGFCASIF---PCFSKQPVITGLCRLHRGLCSLKETFCLLEGHAVEKLIAL 692
+ E C + P S Q I+ C L + + LLE + ++ LI +
Sbjct: 369 RKEFFESGAVEKCKELALDSPV-SVQSEISA-CFAILALADVSK-LDLLEANILDALIPM 425
Query: 693 LDHTNEKVVEASLAALSTVIDDGVDIEQGVMVLCEA--QGIKPILDVLLEKRTENLQRRA 750
N++V + AAL+ + V+ ++ + +GI+ L L+ + A
Sbjct: 426 TFSQNQEVSGNAAAALANLCSR-VNNYTKIIEAWDRPNEGIRGFLIRFLKSDYATFEHIA 484
Query: 751 VWVVERILRT--DDIAYEVSGDPNV 773
+W + ++L + D + V D ++
Sbjct: 485 LWTILQLLESHNDKVEDLVKNDDDI 509
>UNIPROTKB|E1C8F9 [details] [associations]
symbol:E1C8F9 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
InterPro:IPR000225 InterPro:IPR002553 InterPro:IPR016024
Pfam:PF00514 Pfam:PF01602 PROSITE:PS50176 SMART:SM00185
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0030117 GO:GO:0016192 GeneTree:ENSGT00680000099702
OMA:LTNMAMQ InterPro:IPR026840 Pfam:PF14381 EMBL:AADN02000591
EMBL:AADN02000592 IPI:IPI00589277 Ensembl:ENSGALT00000012763
Uniprot:E1C8F9
Length = 876
Score = 145 (56.1 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 61/257 (23%), Positives = 123/257 (47%)
Query: 118 LGSSESDIMP-ALKYVQYFCQSSRSNKHVVHNSELIPMIIDMLKSSSRKVRCTALETLRI 176
LGS + D+ +++ + Q +S + V +IP ++D+LKS ++ AL+TL
Sbjct: 159 LGSPDPDVTKNSVECIYLLVQEFQS-RAAVCELNVIPPLLDLLKSEYPVIQLLALKTLE- 216
Query: 177 VVEEDDDNKEILGQGDTVRTIVKFL-SHELSREREEAVSLLYELSKSEALCEKIGSINGA 235
V+ +D + + ILG+ + + ++K L ++E + EA+++L + + I G
Sbjct: 217 VISKDREMRIILGENEGLDCLLKILETNEFNDLHVEALAVLGNCLEDVHTMQLIRQTGGL 276
Query: 236 --ILILVGMTSSKSENLLTVEK-AEKTLANLEKCENNVRQMAENGRLQPLLTQILEGPQE 292
+L VG+++ ++K A K +A N R++ ++ L +LE +
Sbjct: 277 KKLLSFVGVSTVPD-----IQKNAAKAIAKAASDSEN-RKILNEEDVESCLINLLEIDDD 330
Query: 293 -TKLSLAAFLGDLALNSDVKVLVARTVGSCLINIMKSGNMQAREAALKALNQISSCEPS- 350
K++ + + + N K L+ ++ S + + +EAA+ AL +++ PS
Sbjct: 331 GVKVAASQAISAMCENLASKRAFGLQGIPQLVQLLSSDDEEVKEAAVIALANLTTASPSN 390
Query: 351 AKVLIHAGILPPLVKDL 367
A + A + PLVK L
Sbjct: 391 ASAVAEAEGIEPLVKSL 407
>TAIR|locus:2050659 [details] [associations]
symbol:AT2G45920 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 EMBL:AC004665
HSSP:Q8VZ40 HOGENOM:HOG000115794 ProtClustDB:CLSN2680474
EMBL:AK175182 EMBL:BT015764 EMBL:BT020181 IPI:IPI00546399
PIR:T02455 RefSeq:NP_182116.2 UniGene:At.22480
ProteinModelPortal:Q683D5 SMR:Q683D5 IntAct:Q683D5
EnsemblPlants:AT2G45920.1 GeneID:819200 KEGG:ath:AT2G45920
TAIR:At2g45920 eggNOG:NOG265582 InParanoid:Q683D5 OMA:ENRITES
PhylomeDB:Q683D5 Genevestigator:Q683D5 Uniprot:Q683D5
Length = 400
Score = 140 (54.3 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 31/77 (40%), Positives = 45/77 (58%)
Query: 25 HIE-PIYDAFVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELR 83
H E P Y F+CP++ +VM+DP +G T+E EAI W + G P+T +L
Sbjct: 322 HREAPQY--FICPISLEVMKDPQLAADGFTYEAEAISTWLQ-----GGHETSPMTNTKLH 374
Query: 84 STDLNPSIALRNTIEEW 100
T L P++ALR+ I+EW
Sbjct: 375 HTKLVPNLALRSAIQEW 391
>TAIR|locus:2195563 [details] [associations]
symbol:PUB19 "plant U-box 19" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
InterPro:IPR001841 InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00184 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0010029 GO:GO:0004842 GO:GO:0000151
EMBL:AC004473 HOGENOM:HOG000238412 HSSP:Q8VZ40 eggNOG:NOG251934
ProtClustDB:CLSN2679599 IPI:IPI00530780 PIR:T02271
RefSeq:NP_176225.1 UniGene:At.66059 ProteinModelPortal:O80742
SMR:O80742 PaxDb:O80742 PRIDE:O80742 EnsemblPlants:AT1G60190.1
GeneID:842314 KEGG:ath:AT1G60190 TAIR:At1g60190 InParanoid:O80742
OMA:TELHVAM PhylomeDB:O80742 Genevestigator:O80742 Uniprot:O80742
Length = 686
Score = 135 (52.6 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 29/91 (31%), Positives = 50/91 (54%)
Query: 31 DAFVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTDLNPS 90
D CP++ ++M DPV LE+G T++R +I KWF +G CP T K L ST L +
Sbjct: 280 DDLRCPISLEIMSDPVVLESGHTYDRSSITKWFA----SGNI-TCPKTGKTLVSTVLVDN 334
Query: 91 IALRNTIEEWNARNEAAQLDMARKSLNLGSS 121
+++ I+ ++ +N +K +++ S
Sbjct: 335 FSVKQVIQSYSKQNGVVMGQKGKKKVDVAES 365
Score = 56 (24.8 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 20/74 (27%), Positives = 38/74 (51%)
Query: 679 CLLEGHAVEKLIALLDHTNEKVVEASLAALSTVIDDGVDIEQGVMVLCE-AQGIKPILDV 737
CL+E VE L+ +L + ++ E ++A + + DI ++ E G++ I++V
Sbjct: 411 CLVEAGVVESLMKILRSDDPRIQENAMAGIMNL---SKDIAGKTRIVGEDGGGLRLIVEV 467
Query: 738 LLE-KRTENLQRRA 750
L + R E+ Q A
Sbjct: 468 LNDGARRESRQYAA 481
Score = 38 (18.4 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 11/45 (24%), Positives = 25/45 (55%)
Query: 500 AVGQLGSLIRVI-SENV--GISKEQAAAVGLLAELPERDLGLTRQ 541
A G + L+ ++ SE + G++ + A + +AE P+ + + R+
Sbjct: 544 AAGIVPVLLDLVKSEEISDGVTADSMAILAKMAEYPDGMISVLRR 588
>MGI|MGI:1919387 [details] [associations]
symbol:Wdsub1 "WD repeat, SAM and U-box domain containing 1"
species:10090 "Mus musculus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR011510
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 Pfam:PF07647
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 MGI:MGI:1919387 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ CTD:151525 OMA:HCCCFSP EMBL:AK011391
EMBL:AL929242 EMBL:BC050792 EMBL:BC061948 IPI:IPI00132574
RefSeq:NP_001153108.1 RefSeq:NP_082394.1 UniGene:Mm.288734
UniGene:Mm.488684 ProteinModelPortal:Q9D0I6 SMR:Q9D0I6
PhosphoSite:Q9D0I6 PRIDE:Q9D0I6 Ensembl:ENSMUST00000028368
GeneID:72137 KEGG:mmu:72137 UCSC:uc008jto.2 InParanoid:Q9D0I6
NextBio:335536 Bgee:Q9D0I6 CleanEx:MM_WDSUB1 Genevestigator:Q9D0I6
Uniprot:Q9D0I6
Length = 474
Score = 140 (54.3 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 28/77 (36%), Positives = 44/77 (57%)
Query: 29 IYDAFVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTDLN 88
I D F+CP+T+++M+DPV +G ++EREA+E W + +K P+T L S L
Sbjct: 402 IPDEFICPITRELMKDPVIASDGYSYEREAMESWIHK-----KKRTSPMTNLALPSLVLT 456
Query: 89 PSIALRNTIEEWNARNE 105
P+ L+ I W +E
Sbjct: 457 PNRTLKMAINRWLETHE 473
>TAIR|locus:2198165 [details] [associations]
symbol:AT1G01660 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC009273 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 eggNOG:KOG0167
HOGENOM:HOG000115794 IPI:IPI00527810 PIR:E86147 RefSeq:NP_171672.1
UniGene:At.51449 ProteinModelPortal:P0C6E7 SMR:P0C6E7 PRIDE:P0C6E7
EnsemblPlants:AT1G01660.1 GeneID:839461 KEGG:ath:AT1G01660
TAIR:At1g01660 InParanoid:P0C6E7 PhylomeDB:P0C6E7
ProtClustDB:CLSN2912787 Genevestigator:P0C6E7 Uniprot:P0C6E7
Length = 568
Score = 141 (54.7 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 29/77 (37%), Positives = 48/77 (62%)
Query: 28 PIYDAFVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTDL 87
P Y F+CP++++VMR+P +G T+E E++ +W +NG + P+T +L +L
Sbjct: 498 PSY--FICPISQEVMREPRVAADGFTYEAESLREWL----DNGHE-TSPMTNLKLAHNNL 550
Query: 88 NPSIALRNTIEEWNARN 104
P+ ALR+ I+EW RN
Sbjct: 551 VPNHALRSAIQEWLQRN 567
>TAIR|locus:2012136 [details] [associations]
symbol:PUB26 "plant U-box 26" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC011807 HSSP:Q8VZ40
HOGENOM:HOG000238505 eggNOG:NOG262907 ProtClustDB:CLSN2682687
EMBL:AK118346 EMBL:BT029013 IPI:IPI00542667 PIR:E96534
RefSeq:NP_175400.1 UniGene:At.38168 ProteinModelPortal:Q9FXA4
SMR:Q9FXA4 EnsemblPlants:AT1G49780.1 GeneID:841401
KEGG:ath:AT1G49780 TAIR:At1g49780 InParanoid:Q9FXA4 OMA:CTERAKR
PhylomeDB:Q9FXA4 Genevestigator:Q9FXA4 Uniprot:Q9FXA4
Length = 421
Score = 129 (50.5 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 27/74 (36%), Positives = 40/74 (54%)
Query: 33 FVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTDLNPSIA 92
F CP++ +M DPVT+ GQT++R +I+ W G CP+T+ L L P+
Sbjct: 18 FRCPISLDLMSDPVTISTGQTYDRTSIDSWIAM----GNT-TCPVTRVALSDFTLIPNHT 72
Query: 93 LRNTIEEWNARNEA 106
LR I+EW N +
Sbjct: 73 LRRLIQEWCVANRS 86
Score = 55 (24.4 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 19/75 (25%), Positives = 36/75 (48%)
Query: 163 SRKVRCTALETLRIVVEEDDDNKEILGQGDTVRTIVKFL-----SHELSRER-EEAVSLL 216
S + R A+ LR + + + N+ ++ + +V+ L + LS E E+++LL
Sbjct: 120 SVRSRAAAIRRLRGLARDSEKNRVLIAGHNAREILVRILFADIETTSLSSELVSESLALL 179
Query: 217 YELSKSEALCEKIGS 231
L +E CE + S
Sbjct: 180 VLLHMTETECEAVAS 194
>RGD|1359296 [details] [associations]
symbol:Wdsub1 "WD repeat, sterile alpha motif and U-box domain
containing 1" species:10116 "Rattus norvegicus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 RGD:1359296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ CTD:151525 OMA:HCCCFSP EMBL:BC089856
IPI:IPI00391796 RefSeq:NP_001014201.1 UniGene:Rn.101918
ProteinModelPortal:Q5FVN8 PRIDE:Q5FVN8 Ensembl:ENSRNOT00000008168
GeneID:362137 KEGG:rno:362137 UCSC:RGD:1359296 InParanoid:Q5FVN8
NextBio:678784 ArrayExpress:Q5FVN8 Genevestigator:Q5FVN8
Uniprot:Q5FVN8
Length = 476
Score = 139 (54.0 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 27/72 (37%), Positives = 42/72 (58%)
Query: 29 IYDAFVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTDLN 88
I D F+CP+T+++M+DPV +G ++EREA+E W + +K P+T L S L
Sbjct: 404 IPDEFICPITRELMKDPVIASDGYSYEREAMESWIHK-----KKRTSPMTNLALPSLVLT 458
Query: 89 PSIALRNTIEEW 100
P+ L+ I W
Sbjct: 459 PNRTLKMAINRW 470
>UNIPROTKB|F1MRF3 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 CTD:151525
EMBL:DAAA02004471 IPI:IPI00702869 RefSeq:XP_002685394.1
UniGene:Bt.105170 ProteinModelPortal:F1MRF3
Ensembl:ENSBTAT00000005476 GeneID:783784 KEGG:bta:783784
NextBio:20926301 Uniprot:F1MRF3
Length = 476
Score = 138 (53.6 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 25/72 (34%), Positives = 42/72 (58%)
Query: 29 IYDAFVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTDLN 88
I D F+CP+T+++M+DP+ +G ++E+EA+E W +K P+T L S L
Sbjct: 403 IPDEFICPITRELMKDPIIASDGYSYEKEAMENWISR-----KKRTSPMTNLVLSSVILT 457
Query: 89 PSIALRNTIEEW 100
P+ L+ I+ W
Sbjct: 458 PNRTLKMAIDRW 469
>UNIPROTKB|G3MZA8 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 OMA:HCCCFSP
EMBL:DAAA02004471 ProteinModelPortal:G3MZA8
Ensembl:ENSBTAT00000064632 Uniprot:G3MZA8
Length = 477
Score = 138 (53.6 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 25/72 (34%), Positives = 42/72 (58%)
Query: 29 IYDAFVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTDLN 88
I D F+CP+T+++M+DP+ +G ++E+EA+E W +K P+T L S L
Sbjct: 404 IPDEFICPITRELMKDPIIASDGYSYEKEAMENWISR-----KKRTSPMTNLVLSSVILT 458
Query: 89 PSIALRNTIEEW 100
P+ L+ I+ W
Sbjct: 459 PNRTLKMAIDRW 470
>UNIPROTKB|J9NTP2 [details] [associations]
symbol:KPNA5 "Importin subunit alpha" species:9615 "Canis
lupus familiaris" [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0006606 "protein import into nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000225 InterPro:IPR002652
InterPro:IPR016024 InterPro:IPR024931 Pfam:PF00514 Pfam:PF01749
PIRSF:PIRSF005673 PROSITE:PS50176 PROSITE:PS51214 SMART:SM00185
GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0008565 GO:GO:0006606
GeneTree:ENSGT00610000085856 EMBL:AAEX03000382
Ensembl:ENSCAFT00000047201 Uniprot:J9NTP2
Length = 539
Score = 138 (53.6 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 60/213 (28%), Positives = 95/213 (44%)
Query: 596 LCCEHNLAALFIELL-QSNGLDKVQMVSATALENLSLESKNLTKLPELPPSGFCASIFPC 654
L CE + +ELL SN L + + AL NL KN PP F + + PC
Sbjct: 209 LNCE--ILPPLLELLTNSNRLTTTRN-AVWALSNLC-RGKN-------PPPNF-SKVSPC 256
Query: 655 --------FSKQP-VITGLCRLHRGLCS--LKETFCLLEGHAVEKLIALLDHTNEKVVEA 703
FS P V+ +C L + +++ +L+ LL H + KVV
Sbjct: 257 LNVLSRLLFSSDPDVLADVCWALSYLSDGPNDKIQAVIDSGVCRRLVELLMHNDYKVVSP 316
Query: 704 SLAALSTVIDDGVDIEQGVMVLCEAQGIKPILDVLLEKRTENLQRRAVWVVERILRTDDI 763
+L A+ ++ G DI+ V++ C A P L LL E++++ A W V I +
Sbjct: 317 ALRAVGNIVT-GDDIQTQVILNCSAL---PCLLHLLSSPKESIRKEACWTVSNITAGNRA 372
Query: 764 AYEVSGDPNVSTALVDAFQHADYRTRQIAERAL 796
+ D N+ L++ Q A++RTR+ A A+
Sbjct: 373 QIQAVIDANIFPVLIEILQKAEFRTRKEAAWAI 405
>UNIPROTKB|Q8N9V3 [details] [associations]
symbol:WDSUB1 "WD repeat, SAM and U-box domain-containing
protein 1" species:9606 "Homo sapiens" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR011510
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 Pfam:PF07647
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
EMBL:AC009307 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ EMBL:AK093494 EMBL:AC008277 EMBL:BC029520
IPI:IPI00167822 IPI:IPI00477952 RefSeq:NP_001121684.1
RefSeq:NP_689741.2 UniGene:Hs.20848 ProteinModelPortal:Q8N9V3
SMR:Q8N9V3 PhosphoSite:Q8N9V3 DMDM:229463016 PaxDb:Q8N9V3
PRIDE:Q8N9V3 Ensembl:ENST00000358147 Ensembl:ENST00000359774
Ensembl:ENST00000392796 Ensembl:ENST00000409990 GeneID:151525
KEGG:hsa:151525 UCSC:uc010foo.3 CTD:151525 GeneCards:GC02M160092
HGNC:HGNC:26697 HPA:HPA036840 neXtProt:NX_Q8N9V3
PharmGKB:PA128394761 InParanoid:Q8N9V3 OMA:HCCCFSP PhylomeDB:Q8N9V3
GenomeRNAi:151525 NextBio:86717 ArrayExpress:Q8N9V3 Bgee:Q8N9V3
CleanEx:HS_WDSUB1 Genevestigator:Q8N9V3 Uniprot:Q8N9V3
Length = 476
Score = 137 (53.3 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 26/72 (36%), Positives = 42/72 (58%)
Query: 29 IYDAFVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTDLN 88
I D F+CP+T+++M+DPV +G ++E+EA+E W + +K P+T L S L
Sbjct: 404 IPDEFICPITRELMKDPVIASDGYSYEKEAMENWISK-----KKRTSPMTNLVLPSAVLT 458
Query: 89 PSIALRNTIEEW 100
P+ L+ I W
Sbjct: 459 PNRTLKMAINRW 470
>UNIPROTKB|F1RTU5 [details] [associations]
symbol:KPNA5 "Importin subunit alpha" species:9823 "Sus
scrofa" [GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0006606 "protein import into nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000225 InterPro:IPR002652 InterPro:IPR016024
InterPro:IPR024931 Pfam:PF00514 Pfam:PF01749 PIRSF:PIRSF005673
PROSITE:PS50176 PROSITE:PS51214 SMART:SM00185 GO:GO:0005634
GO:GO:0005737 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0008565 GO:GO:0006606 GeneTree:ENSGT00610000085856
OMA:IFPILIE EMBL:CU407116 Ensembl:ENSSSCT00000004711
ArrayExpress:F1RTU5 Uniprot:F1RTU5
Length = 538
Score = 137 (53.3 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 57/212 (26%), Positives = 94/212 (44%)
Query: 596 LCCEHNLAALFIELLQSNGLDKVQMVSATALENLSLESKNLTKLPELPPSGFCASIFPC- 654
L CE + +ELL ++ + AL NL KN PP F + + PC
Sbjct: 208 LNCE--ILPPLLELLTNSDRLTTTRNAVWALSNLC-RGKN-------PPPNF-SKVSPCL 256
Query: 655 -------FSKQP-VITGLCRLHRGLCS--LKETFCLLEGHAVEKLIALLDHTNEKVVEAS 704
FS P V+ +C L + +++ +L+ LL H++ KVV +
Sbjct: 257 NVLSRLLFSSDPDVLADVCWALSYLSDGPNDKIQAVIDSGVCRRLVELLMHSDYKVVSPA 316
Query: 705 LAALSTVIDDGVDIEQGVMVLCEAQGIKPILDVLLEKRTENLQRRAVWVVERILRTDDIA 764
L A+ ++ G DI+ V++ C A P L LL E++++ A W V I +
Sbjct: 317 LRAVGNIVT-GNDIQTQVILNCSAL---PCLLHLLSSSKESIRKEACWTVSNITAGNRAQ 372
Query: 765 YEVSGDPNVSTALVDAFQHADYRTRQIAERAL 796
+ D N+ L++ Q A++RTR+ A A+
Sbjct: 373 IQAVIDANIFPVLIEILQKAEFRTRKEAAWAI 404
>POMBASE|SPBC354.14c [details] [associations]
symbol:vac8 "vacuolar protein Vac8 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000011 "vacuole
inheritance" evidence=ISO] [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0000324 "fungal-type vacuole" evidence=ISO]
[GO:0000329 "fungal-type vacuole membrane" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0016236
"macroautophagy" evidence=ISO] [GO:0042144 "vacuole fusion,
non-autophagic" evidence=ISO] [GO:0043234 "protein complex"
evidence=NAS] [GO:0043495 "protein anchor" evidence=ISO]
[GO:0071255 "CVT vesicle assembly" evidence=ISO] InterPro:IPR000225
InterPro:IPR016024 InterPro:IPR026958 Pfam:PF00514 PROSITE:PS50176
SMART:SM00185 PomBase:SPBC354.14c GO:GO:0005794 GO:GO:0043234
GO:GO:0000139 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:CU329671 GenomeReviews:CU329671_GR eggNOG:COG5064
GO:GO:0000329 GO:GO:0043495 GO:GO:0000011 HSSP:Q02248 GO:GO:0016236
GO:GO:0042144 KO:K08332 PANTHER:PTHR23315:SF8 PIR:T40294
RefSeq:NP_595238.1 ProteinModelPortal:O43028 STRING:O43028
EnsemblFungi:SPBC354.14c.1 GeneID:2541010 KEGG:spo:SPBC354.14c
HOGENOM:HOG000177331 OMA:EEIQCHA OrthoDB:EOG4QZBV8 NextBio:20802124
GO:GO:0071255 Uniprot:O43028
Length = 550
Score = 137 (53.3 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 79/288 (27%), Positives = 129/288 (44%)
Query: 76 PLTQ----KELRSTDLNPSIALRNTIEEWNARNEAAQLDMARKSLNL-GSSESDIMPALK 130
PLT+ K++R N + AL N + R + ++L SS++D
Sbjct: 171 PLTRLAKSKDIR-VQRNATGALLNMTHSYENRQQLVSAGTIPVLVSLLPSSDTD------ 223
Query: 131 YVQYFCQSSRSNKHV--VHN-----SE--LIPMIIDMLKSSSRKVRCTALETLRIVVEED 181
VQY+C +S SN V VH SE L+ +I ++ +SS KV+C A LR + ++
Sbjct: 224 -VQYYCTTSISNIAVDAVHRKRLAQSEPKLVRSLIQLMDTSSPKVQCQAALALRNLASDE 282
Query: 182 DDNKEILGQGDTVRTIVKFLSHELSREREEAVSLLYELSKSEALCEKIGSINGAILILVG 241
EI+ Q + + ++++ L +V+ + +S L E G + LV
Sbjct: 283 RYQIEIV-QSNALPSLLRLLRSSYLPLILASVACIRNIS-IHPLNESPIIDAGFLRPLVD 340
Query: 242 MTSSKSENLLTVEKAEKTLANLE-KCENNVRQMAENGRLQPLLTQILEGPQETKLSLAAF 300
+ S +EN A TL NL E N R + E +Q L IL+ P + + A
Sbjct: 341 LLSC-TENEEIQCHAVSTLRNLAASSERNKRAIIEANAIQKLRCLILDAPVSVQSEMTAC 399
Query: 301 LGDLALNSDVKVLVARTVGSC--LINIMKSGNMQAREAALKALNQISS 346
L LAL+ + K + G C LI + S +++ + + AL +SS
Sbjct: 400 LAVLALSDEFKSYLLN-FGICNVLIPLTDSMSIEVQGNSAAALGNLSS 446
Score = 108 (43.1 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 34/121 (28%), Positives = 66/121 (54%)
Query: 247 SENLLTVEKAEKTLANLEKCENNVRQMAENGRLQPLLTQILEGPQ-ETKLSLAAFLGDLA 305
S+NL A LA E E +VR++ + ++P+L +L+ P E + + + LG+LA
Sbjct: 58 SDNLDLQRSA--ALAFAEITEKDVREV-DRETIEPVLF-LLQSPDAEIQRAASVALGNLA 113
Query: 306 LNSDVKVLVARTVG-SCLINIMKSGNMQAREAALKALNQISSCEPSAKVLIHAGILPPLV 364
+N++ K LV + G LI M S +++ + A+ + +++ + + + H+G L PL
Sbjct: 114 VNAENKALVVKLNGLDLLIRQMMSPHVEVQCNAVGCITNLATLDENKSKIAHSGALGPLT 173
Query: 365 K 365
+
Sbjct: 174 R 174
Score = 70 (29.7 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 32/160 (20%), Positives = 76/160 (47%)
Query: 605 LFIELLQSNGLDKVQMVSATALENLSLESKNLTKLPELPPSGFCASIFPCFSKQPVITGL 664
+ + LL S+ D VQ T++ N+++++ + +L + P + I + P +
Sbjct: 212 VLVSLLPSSDTD-VQYYCTTSISNIAVDAVHRKRLAQSEPKLVRSLIQLMDTSSPKVQCQ 270
Query: 665 CRLH-RGLCSLKE-TFCLLEGHAVEKLIALLDHTNEKVVEASLAALSTVIDDGVDIEQGV 722
L R L S + +++ +A+ L+ LL + ++ AS+A + + ++ E +
Sbjct: 271 AALALRNLASDERYQIEIVQSNALPSLLRLLRSSYLPLILASVACIRNISIHPLN-ESPI 329
Query: 723 MVLCEAQGIKPILDVLLEKRTENLQRRAVWVVERILRTDD 762
+ +A ++P++D+L E +Q AV + + + +
Sbjct: 330 I---DAGFLRPLVDLLSCTENEEIQCHAVSTLRNLAASSE 366
>MGI|MGI:1918132 [details] [associations]
symbol:Armc3 "armadillo repeat containing 3" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000225
InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
MGI:MGI:1918132 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AK041744 EMBL:AL929034 IPI:IPI00226920
IPI:IPI00606353 RefSeq:NP_001074552.1 UniGene:Mm.276696
ProteinModelPortal:A2AU72 SMR:A2AU72 PhosphoSite:A2AU72
PaxDb:A2AU72 PRIDE:A2AU72 Ensembl:ENSMUST00000114640 GeneID:70882
KEGG:mmu:70882 UCSC:uc008imd.1 CTD:219681 eggNOG:NOG265712
GeneTree:ENSGT00680000099702 HOGENOM:HOG000231960
HOVERGEN:HBG059366 InParanoid:A2AU72 OMA:LTNMAMQ OrthoDB:EOG47M1XS
NextBio:332490 Bgee:A2AU72 CleanEx:MM_ARMC3 Genevestigator:A2AU72
InterPro:IPR026840 Pfam:PF14381 Uniprot:A2AU72
Length = 881
Score = 109 (43.4 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 56/241 (23%), Positives = 101/241 (41%)
Query: 155 IIDMLKSSSRKVRCTALETLRIVVEEDDDNKEILGQGDTVRTIVKFLSHELSREREEAVS 214
++ MLKS + A E + + ++NK L + V + K L+HE R A+
Sbjct: 30 VVLMLKSPEEDILAKACEAIYKFALKGEENKATLLELGAVEPLTKLLTHEDKTVRRNAMM 89
Query: 215 LLYEL-SKSEA--LCEKIGSINGAILILVGMTSSKSENLLTVEKAEKTLANLEKCENNVR 271
+ L S S+ L ++ +N I L S E ++ E A LAN+
Sbjct: 90 IFGILASNSDVKKLLRELEVMNSVIAQL-----SPEEEVVIHEFASLCLANMSVEYTGKV 144
Query: 272 QMAENGRLQPLLTQILEGPQETKLSLAAFLGDLALNSDVKVLVARTVG-SCLINIMKSGN 330
Q+ E+G L+PL+ + + K + + +L + + + ++ +++S
Sbjct: 145 QIFEHGGLEPLIRLLSSSDPDVKKNSIECIYNLVQDFQCRTTLQELNAIPPILELLRSEY 204
Query: 331 MQAREAALKALNQISSCEPSAKVLIHAGI-LPPLVKDLFTVGSNHLPMRLKEVSATILAN 389
+ ALK L I+ C+ A+ ++ L L K L T N L + V A L +
Sbjct: 205 PIIQLLALKTLGVIT-CDKEARTMLKENQGLDHLTKILETKELNDLHVEALSVIANCLED 263
Query: 390 V 390
+
Sbjct: 264 M 264
Score = 81 (33.6 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 39/163 (23%), Positives = 70/163 (42%)
Query: 607 IELLQSNGLDKVQMVSATALENLSLESK-NLTKLPELPPSGFCASIFPCFSKQPVITGLC 665
++LL+S+ ++V+ +A AL NL+ S N E +I + I
Sbjct: 362 VQLLRSDN-EEVREAAALALANLTTSSPANANAAAEADAIDPLINILSS-KRDGAIANAA 419
Query: 666 RLHRGLCSLKETFCLLEGHAV-EKLIALLDHTNEKVVEASLAALSTVIDDGVDIEQGVMV 724
+ + + + +++ H + L+ L TN V S AAL TV D+E
Sbjct: 420 TVLTNMATQEPLRAIIQNHEIMHALLGPLHSTNTLV--QSTAAL-TVAATACDVEARTQ- 475
Query: 725 LCEAQGIKPILDVLLEKRTENLQRRAVWVVERILRTDDIAYEV 767
L G+ P++ LL + + ++R A W V + +A E+
Sbjct: 476 LRNCGGLVPLVG-LLHSKNDEVRRHASWAVMVCAGDEPMAVEL 517
Score = 65 (27.9 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 36/169 (21%), Positives = 66/169 (39%)
Query: 577 LSVLARVTFVLSDEPDAIALCCEHNLAALFIELLQSNGLDKVQMVSATALENLSLESKNL 636
LSV+A ++ D + L + + +S+ + +Q +A A+ + + +N
Sbjct: 254 LSVIANCL----EDMDTMVLMQQTGSLKKVLSFAESSTIPDIQKNAAKAIAKAAYDPENR 309
Query: 637 TKLPELPPSGFCASIFPCFSKQPVITGLCRLHRGLC---SLKETFCLLEGHAVEKLIALL 693
E ++ S I + LC S KE F + +++ LL
Sbjct: 310 KVFHEQEVEKCLVTLLGSDSDGTKIAASQAIS-ALCENLSCKEFF---NTQGIPQIVQLL 365
Query: 694 DHTNEKVVEASLAALSTVIDDGVDIEQGVMVLCEAQGIKPILDVLLEKR 742
NE+V EA+ AL+ + EA I P++++L KR
Sbjct: 366 RSDNEEVREAAALALANLTTSS---PANANAAAEADAIDPLINILSSKR 411
>UNIPROTKB|O15131 [details] [associations]
symbol:KPNA5 "Importin subunit alpha-6" species:9606 "Homo
sapiens" [GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0006607 "NLS-bearing substrate import into nucleus"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0019221 "cytokine-mediated signaling
pathway" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000225 InterPro:IPR002652 InterPro:IPR016024
InterPro:IPR024931 Pfam:PF00514 Pfam:PF01749 PIRSF:PIRSF005673
PROSITE:PS50176 PROSITE:PS51214 SMART:SM00185 GO:GO:0005829
Reactome:REACT_6900 GO:GO:0005654 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0008565 EMBL:CH471051 GO:GO:0019221
eggNOG:COG5064 GO:GO:0006607 HOGENOM:HOG000167616
HOVERGEN:HBG001846 CTD:3841 OrthoDB:EOG4NP739 EMBL:AF005361
EMBL:AK314206 EMBL:AL132795 EMBL:BC047409 IPI:IPI00413214
RefSeq:NP_002260.2 UniGene:Hs.182971 ProteinModelPortal:O15131
SMR:O15131 DIP:DIP-33405N IntAct:O15131 MINT:MINT-2860255
STRING:O15131 PhosphoSite:O15131 PaxDb:O15131 PRIDE:O15131
DNASU:3841 Ensembl:ENST00000356348 Ensembl:ENST00000368564
GeneID:3841 KEGG:hsa:3841 UCSC:uc003pxh.3 GeneCards:GC06P117048
HGNC:HGNC:6398 HPA:CAB026464 MIM:604545 neXtProt:NX_O15131
PharmGKB:PA30189 InParanoid:O15131 ChiTaRS:KPNA5 GenomeRNAi:3841
NextBio:15115 ArrayExpress:O15131 Bgee:O15131 CleanEx:HS_KPNA5
Genevestigator:O15131 GermOnline:ENSG00000196911 Uniprot:O15131
Length = 536
Score = 138 (53.6 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 60/213 (28%), Positives = 95/213 (44%)
Query: 596 LCCEHNLAALFIELL-QSNGLDKVQMVSATALENLSLESKNLTKLPELPPSGFCASIFPC 654
L CE + +ELL SN L + + AL NL KN PP F + + PC
Sbjct: 206 LNCE--ILPPLLELLTNSNRLTTTRN-AVWALSNLC-RGKN-------PPPNF-SKVSPC 253
Query: 655 --------FSKQP-VITGLCRLHRGLCS--LKETFCLLEGHAVEKLIALLDHTNEKVVEA 703
FS P V+ +C L + +++ +L+ LL H + KVV
Sbjct: 254 LNVLSRLLFSSDPDVLADVCWALSYLSDGPNDKIQAVIDSGVCRRLVELLMHNDYKVVSP 313
Query: 704 SLAALSTVIDDGVDIEQGVMVLCEAQGIKPILDVLLEKRTENLQRRAVWVVERILRTDDI 763
+L A+ ++ G DI+ V++ C A P L LL E++++ A W V I +
Sbjct: 314 ALRAVGNIVT-GDDIQTQVILNCSAL---PCLLHLLSSPKESIRKEACWTVSNITAGNRA 369
Query: 764 AYEVSGDPNVSTALVDAFQHADYRTRQIAERAL 796
+ D N+ L++ Q A++RTR+ A A+
Sbjct: 370 QIQAVIDANIFPVLIEILQKAEFRTRKEAAWAI 402
Score = 45 (20.9 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 17/81 (20%), Positives = 38/81 (46%)
Query: 290 PQETKLSLAAFLGDLALNSDVKVLVARTVGSCLINIMKSGNMQAREAALKALNQISSCEP 349
P+ + L + + D ++S V + V + ++ ++ S N + A + ++ S EP
Sbjct: 53 PRNDESMLESPIQDPDISSTVPIPEEEVVTTDMVQMIFSNNADQQLTATQKFRKLLSKEP 112
Query: 350 SA---KVLIHAGILPPLVKDL 367
+ +V+ G++ VK L
Sbjct: 113 NPPIDQVIQKPGVVQRFVKFL 133
>TAIR|locus:2130699 [details] [associations]
symbol:AT4G16490 "AT4G16490" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0006816
"calcium ion transport" evidence=RCA] [GO:0007030 "Golgi
organization" evidence=RCA] [GO:0009651 "response to salt stress"
evidence=RCA] InterPro:IPR000225 InterPro:IPR016024 Pfam:PF00514
PROSITE:PS50176 SMART:SM00185 EMBL:CP002687 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 IPI:IPI00531461
RefSeq:NP_567501.4 UniGene:At.23147 UniGene:At.75353
ProteinModelPortal:F4JMH0 SMR:F4JMH0 EnsemblPlants:AT4G16490.1
GeneID:827347 KEGG:ath:AT4G16490 OMA:DLQPTVK Uniprot:F4JMH0
Length = 472
Score = 135 (52.6 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 50/216 (23%), Positives = 98/216 (45%)
Query: 152 IPMIIDMLKSSSRKVRCTALETLRIVVEEDDDNKEILGQGDTVRTIVKFLSHELSREREE 211
+ + ID L+SSS ++ +A LR++ + DN+ ++G+ ++ ++ L +E
Sbjct: 185 VKLCIDGLRSSSVAIKRSAAAKLRLLAKNRADNRVLIGESGAIQALIPLLRCNDPWTQEH 244
Query: 212 AVSLLYELSKSEALCEKIGSINGAILILVGMTSSKSENLLTVEKAEKTLANLEKCENNVR 271
AV+ L LS + I + GAI LV + + +E + + A L +L E N
Sbjct: 245 AVTALLNLSLHDQNKAVIAA-GGAIKSLVWVLKTGTET--SKQNAACALLSLALLEENKG 301
Query: 272 QMAENGRLQPLLTQILEGPQETKLSLAAFLGDLALNSDVKVLVARTVGSC--LINIMKSG 329
+ G + PL++ +L G K L L K A T G+ L++++
Sbjct: 302 SIGACGAIPPLVSLLLNGSCRGKKDALTTLYKLCTLQQNKER-AVTAGAVKPLVDLVAEE 360
Query: 330 NMQAREAALKALNQISSCEPSAKVLIHAGILPPLVK 365
E A+ L+ +++ + + ++ G + LV+
Sbjct: 361 GTGMAEKAMVVLSSLAAIDDGKEAIVEEGGIAALVE 396
Score = 135 (52.6 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 63/265 (23%), Positives = 117/265 (44%)
Query: 132 VQYFCQSSRSNKHVVHNSELIPMIIDMLKSSSRKVRCTALETLRIVVEEDDDNKEILGQG 191
++ ++ N+ ++ S I +I +L+ + + A+ L + + D NK ++ G
Sbjct: 207 LRLLAKNRADNRVLIGESGAIQALIPLLRCNDPWTQEHAVTAL-LNLSLHDQNKAVIAAG 265
Query: 192 DTVRTIVKFLSHELSREREEAVSLLYELSKSEALCEKIGSINGAI-----LILVGMTSSK 246
++++V L ++ A L L+ E IG+ GAI L+L G K
Sbjct: 266 GAIKSLVWVLKTGTETSKQNAACALLSLALLEENKGSIGAC-GAIPPLVSLLLNGSCRGK 324
Query: 247 SENLLTVEKAEKTLANLEKCENNVRQMAENGRLQPLLTQILEGPQETKLSLAAFLGDLAL 306
+ L T+ K L L+ +N R + G ++PL+ + E L LA
Sbjct: 325 KDALTTLYK----LCTLQ--QNKERAVTA-GAVKPLVDLVAEEGTGMAEKAMVVLSSLAA 377
Query: 307 NSDVKVLVARTVG-SCLINIMKSGNMQAREAALKALNQISSCEPSAK---VLIHAGILPP 362
D K + G + L+ ++ G+++ +E A+ L Q+ C S + +L+ G +PP
Sbjct: 378 IDDGKEAIVEEGGIAALVEAIEDGSVKGKEFAILTLLQL--CSDSVRNRGLLVREGAIPP 435
Query: 363 LVKDLFTVGSNHLPMRLKEVSATIL 387
LV L GS + +R K + +L
Sbjct: 436 LV-GLSQSGS--VSVRAKRKAERLL 457
>ZFIN|ZDB-GENE-081030-6 [details] [associations]
symbol:trim35-38 "tripartite motif containing 35-38"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-081030-6 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00680000099496
EMBL:CU137686 IPI:IPI00859170 Ensembl:ENSDART00000036309
Uniprot:E7F326
Length = 450
Score = 134 (52.2 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 61/238 (25%), Positives = 119/238 (50%)
Query: 30 YDAFVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTDLNP 89
YD ++CP+ +++ + PV L +F +E ++++++ +N ++ CP+ ++ RS+ NP
Sbjct: 7 YD-YICPVCQEIFKTPVILSCSHSFCKECLQQFWRN--KNTQE--CPVCRR--RSSKENP 59
Query: 90 --SIALRNTIEEW-NARNEAAQLDMARKSLNLGSSESDIMPALKYVQYFCQSSR-SNKHV 145
++AL+N E + RNE ++ + + +L S + + L+ Q C R S KH+
Sbjct: 60 PVNLALQNLCESFLKERNER-RISGSEEICSLHSEKLKLF-CLEDKQPVCLVCRDSEKHL 117
Query: 146 VHN----SELIPMIIDMLKSSSRKV--RCTALETLRIVVEEDDDNKEILGQGD-TVRTIV 198
H SE+ P + L ++ + + +C E ++ E+ + I Q + T R I
Sbjct: 118 KHTFRPISEMAPAKKEELNTALKSLQEKCKLNEEMKREFEKTAQH--IKAQAEHTERQIK 175
Query: 199 KFLS--HELSREREEA-VSLLYELS--KSEALCEKIGSINGAILILVGMTSSKSENLL 251
+ H+ R+ EEA ++ L E K + + EK+ +N I L T +E +L
Sbjct: 176 QQFEKLHQFLRDEEEATITALREEEEQKKQMMKEKLEEMNTHISAL-SHTIKDTEEML 232
>UNIPROTKB|E1C4J0 [details] [associations]
symbol:KPNA5 "Importin subunit alpha" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006606 "protein import into nucleus"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] InterPro:IPR000225 InterPro:IPR002652
InterPro:IPR016024 InterPro:IPR024931 Pfam:PF00514 Pfam:PF01749
PIRSF:PIRSF005673 PROSITE:PS50176 PROSITE:PS51214 SMART:SM00185
GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0008565 GO:GO:0006606
GeneTree:ENSGT00610000085856 CTD:3841 OMA:IFPILIE EMBL:AADN02001990
IPI:IPI00584385 RefSeq:XP_419770.2 UniGene:Gga.54182
Ensembl:ENSGALT00000024093 GeneID:421738 KEGG:gga:421738
NextBio:20824463 Uniprot:E1C4J0
Length = 539
Score = 135 (52.6 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 54/196 (27%), Positives = 88/196 (44%)
Query: 607 IELL-QSNGLDKVQMVSATALENLSLESKNLTKLPELPPSGFCASIFP--CFSKQP-VIT 662
+ELL SN L + + AL NL KN P+ C ++ FS P V+
Sbjct: 218 LELLTNSNRLTTTRN-AVWALSNLC-RGKNPP--PDFSKVAPCLNVLSRLLFSSDPDVLA 273
Query: 663 GLCRLHRGLCS--LKETFCLLEGHAVEKLIALLDHTNEKVVEASLAALSTVIDDGVDIEQ 720
C L + +++ +L+ LL H + KVV +L A+ ++ G DI+
Sbjct: 274 DACWALSYLSDGPNDKIQAVIDSGVCRRLVELLMHNDYKVVSPALRAVGNIVT-GDDIQT 332
Query: 721 GVMVLCEAQGIKPILDVLLEKRTENLQRRAVWVVERILRTDDIAYEVSGDPNVSTALVDA 780
V++ C A P L LL E++++ A W V I + + D N+ L++
Sbjct: 333 QVILNCSAL---PCLLHLLSSPKESIRKEACWTVSNITAGNRAQIQAVIDANIFPILIEI 389
Query: 781 FQHADYRTRQIAERAL 796
Q A++RTR+ A A+
Sbjct: 390 LQKAEFRTRKEAAWAI 405
>UNIPROTKB|G4MZS0 [details] [associations]
symbol:MGG_15072 "Importin subunit alpha" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR000225 InterPro:IPR002652
InterPro:IPR016024 InterPro:IPR024931 Pfam:PF00514 Pfam:PF01749
PIRSF:PIRSF005673 PROSITE:PS50176 PROSITE:PS51214 SMART:SM00185
GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0008565 GO:GO:0006606 EMBL:CM001232
RefSeq:XP_003715241.1 ProteinModelPortal:G4MZS0 SMR:G4MZS0
EnsemblFungi:MGG_15072T0 GeneID:12985596 KEGG:mgr:MGG_15072
Uniprot:G4MZS0
Length = 551
Score = 116 (45.9 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 64/310 (20%), Positives = 131/310 (42%)
Query: 120 SSESDIMPALKYVQYFCQSSRSNKHVVHNSELIPMIIDMLKSSSRKVRCTALETLRIVVE 179
S ++ I K+ + + V + ++ ++ L+S V+ A L +
Sbjct: 94 SIDAQIQATTKFRKLLSKERNPPIEEVIKTGVVSRFVEFLRSPHTLVQFEAAWALTNIAS 153
Query: 180 EDDDNKEILGQGDTVRTIVKFLSHELSREREEAVSLLYELSKSEALCEKIGSINGAILIL 239
+++ + V V+ L RE+AV L ++ C GA+ L
Sbjct: 154 GSATQTQVVIEAGAVPIFVELLGSPEPDVREQAVWALGNIAGDSPQCRDYVLSCGALKPL 213
Query: 240 VGMTSSKSENLLTVEKAEKTLANLEKCENNVRQMAENGRLQPLLTQILEGPQETKLSLA- 298
+ + S L + A TL+N + + P+L +++ + L A
Sbjct: 214 LNLLGD-SRKLSMLRNATWTLSNFCRGKTPQPDWTTIAPALPVLAKLVYSLDDEVLIDAC 272
Query: 299 ---AFLGDLALNSDVKVLVARTVGSCLINIMKSGNMQAREAALKAL-NQISSCEPSAKVL 354
++L D N ++ ++ + L+ ++ + + AL+++ N ++ + +V+
Sbjct: 273 WAISYLSD-GSNDKIQAVIEAGIPRRLVELLMHASTSVQTPALRSVGNIVTGDDVQTQVI 331
Query: 355 IHAGILPPLVKDLFTVGSNHLPMRLKEVSATILANVVNSGHDFDSITVGPDNQTLVSEDI 414
I+ G LP L L +GSN +R KE TI +N+ +G+ S + Q++V +I
Sbjct: 332 INCGALPCL---LSLLGSNKDGIR-KEACWTI-SNIT-AGN---SAQI----QSVVDANI 378
Query: 415 VHNLLHLISN 424
+ L+HL+SN
Sbjct: 379 IPPLIHLLSN 388
Score = 66 (28.3 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 24/92 (26%), Positives = 46/92 (50%)
Query: 680 LLEGHAVEKLIALLDHTNEKVVEASLAALSTVIDDGVDIEQGVMVLCEAQG-IKPILDVL 738
+++ + + LI LL + + K + + A+S G+ + L AQG IKP+ D L
Sbjct: 373 VVDANIIPPLIHLLSNGDLKTRKEACWAISNATSGGLQKPDQIRYLV-AQGCIKPLCD-L 430
Query: 739 LEKRTENLQRRAVWVVERILRTDDIAYEVSGD 770
L + + A+ +E IL+ D+ + +G+
Sbjct: 431 LSCPDNKIIQVALDGLENILKVGDLDKQAAGE 462
>TAIR|locus:2169861 [details] [associations]
symbol:AT5G37490 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0010200 "response to chitin"
evidence=IEP;RCA] [GO:0002679 "respiratory burst involved in
defense response" evidence=RCA] [GO:0009693 "ethylene biosynthetic
process" evidence=RCA] [GO:0035556 "intracellular signal
transduction" evidence=RCA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002688 GenomeReviews:BA000015_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AB025630 HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT020311
EMBL:BT020439 IPI:IPI00541809 RefSeq:NP_198565.1 UniGene:At.30484
ProteinModelPortal:Q5PNY6 SMR:Q5PNY6 STRING:Q5PNY6 PRIDE:Q5PNY6
EnsemblPlants:AT5G37490.1 GeneID:833727 KEGG:ath:AT5G37490
TAIR:At5g37490 eggNOG:NOG287305 InParanoid:Q5PNY6 OMA:HAPLRHE
PhylomeDB:Q5PNY6 ProtClustDB:CLSN2916550 Genevestigator:Q5PNY6
Uniprot:Q5PNY6
Length = 435
Score = 118 (46.6 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 24/68 (35%), Positives = 38/68 (55%)
Query: 33 FVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTDLNPSIA 92
F CP++ +M+DPV + G T++R +IE W +G K CP+T L + D P+
Sbjct: 35 FQCPISIDLMKDPVIISTGITYDRVSIETWIN----SGNK-TCPVTNTVLTTFDQIPNHT 89
Query: 93 LRNTIEEW 100
+R I+ W
Sbjct: 90 IRKMIQGW 97
Score = 61 (26.5 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 38/160 (23%), Positives = 67/160 (41%)
Query: 192 DTVRTIVKFLSHE-LSREREEAVSLLYELSKSEALCEKI------GSINGAILILVGMTS 244
D+VR F+ E LS + S E +EAL + I S +++ + M
Sbjct: 226 DSVRQNAAFIMKEILSLDETRVHSFAVENGVAEALVKLIRDSVSSSSTKSSLIAIYQMVL 285
Query: 245 SKSE---NLLTVEKAEKTLANLEKCENNVRQMAENGRLQPLLTQILEGPQETKLSLAAFL 301
K E L + T+ + EN+V + A + + + G +E + + A +
Sbjct: 286 QKPEIASEFLEIGLVSITVEMIVDAENSVCEKAL--AVLDAICETEHGREEVRKN--ALV 341
Query: 302 GDLALNSDVKV--LVARTVGSCLINIMKSGNMQAREAALK 339
L + KV L R+ S ++ + K+GN A E A++
Sbjct: 342 MPLLVKKIAKVSELATRSSMSMILKLWKTGNTVAVEDAVR 381
Score = 58 (25.5 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 42/204 (20%), Positives = 89/204 (43%)
Query: 80 KELRSTDLNP--SIALRNTIEEWNARNEAAQLDMARKSLNLGSSESDIMPALKYVQYFCQ 137
KE+ S D S A+ N + E A + + R S++ S++S ++ A+ Y Q Q
Sbjct: 237 KEILSLDETRVHSFAVENGVAE-------ALVKLIRDSVSSSSTKSSLI-AI-Y-QMVLQ 286
Query: 138 SSRSNKHVVHNSELIPMIIDMLKSSSRKVRCTALETLRIVVEEDDDNKEILGQGDTVRTI 197
+ L+ + ++M+ + V AL L + E + +E+ + +
Sbjct: 287 KPEIASEFLEIG-LVSITVEMIVDAENSVCEKALAVLDAICETEHGREEVRKNALVMPLL 345
Query: 198 VKFLSHELSREREEAVSLLYELSKS--EALCE---KIGSINGAILIL-VGM---TSSKSE 248
VK ++ ++S++ +L K+ E ++G+ +L+L VG T K+
Sbjct: 346 VKKIAKVSELATRSSMSMILKLWKTGNTVAVEDAVRLGAFQKVLLVLQVGYGEETKEKAT 405
Query: 249 NLLTVEKAEKTLANLEKCENNVRQ 272
LL + + L + C +++++
Sbjct: 406 ELLKMMNTQMKL--MSDCVDSLKE 427
Score = 50 (22.7 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 17/73 (23%), Positives = 33/73 (45%)
Query: 295 LSLAAFLGDLALNSDVKVLVARTVGSCLINIMKSGNMQAREAALKALNQISSCEPSA--K 352
LSL ++ + L + L + T C+ ++KS + R+ A + +I S + +
Sbjct: 191 LSLLTWMFPIGLEG-ISKLASATSFRCVAGLLKSTDDSVRQNAAFIMKEILSLDETRVHS 249
Query: 353 VLIHAGILPPLVK 365
+ G+ LVK
Sbjct: 250 FAVENGVAEALVK 262
>UNIPROTKB|E2QX39 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 Gene3D:3.30.40.10 InterPro:IPR013083
Gene3D:1.10.150.50 InterPro:IPR013761 InterPro:IPR021129
Pfam:PF00536 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 CTD:151525 OMA:HCCCFSP
EMBL:AAEX03017692 RefSeq:XP_535926.3 Ensembl:ENSCAFT00000039730
GeneID:478761 KEGG:cfa:478761 NextBio:20854042 Uniprot:E2QX39
Length = 476
Score = 133 (51.9 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 26/72 (36%), Positives = 42/72 (58%)
Query: 29 IYDAFVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTDLN 88
I D F+CP+T+++M+DPV +G ++E+EA+E W + +K P+T L S L
Sbjct: 404 IPDEFLCPITRELMKDPVIASDGYSYEKEAMENWISK-----KKRTSPMTNLILPSMVLT 458
Query: 89 PSIALRNTIEEW 100
P+ L+ I W
Sbjct: 459 PNRTLKMAISRW 470
>UNIPROTKB|F1SV93 [details] [associations]
symbol:KPNA6 "Importin subunit alpha" species:9823 "Sus
scrofa" [GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0006606 "protein import into nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000225 InterPro:IPR002652 InterPro:IPR016024
InterPro:IPR024931 Pfam:PF00514 Pfam:PF01749 PIRSF:PIRSF005673
PROSITE:PS50176 PROSITE:PS51214 SMART:SM00185 GO:GO:0005634
GO:GO:0005737 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0008565 GO:GO:0006606 GeneTree:ENSGT00610000085856
OMA:HNDNKVA EMBL:FP102820 EMBL:FP325355 Ensembl:ENSSSCT00000023741
Ensembl:ENSSSCT00000026268 Uniprot:F1SV93
Length = 490
Score = 132 (51.5 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 32/117 (27%), Positives = 59/117 (50%)
Query: 680 LLEGHAVEKLIALLDHTNEKVVEASLAALSTVIDDGVDIEQGVMVLCEAQGIKPILDVLL 739
+++ +L+ LL H + KV +L A+ ++ G DI+ V+V+C P L LL
Sbjct: 290 VIDSGVCRRLVELLMHNDNKVASPALRAVGNIVT-GDDIQTQVIVICVYA--PPCLLHLL 346
Query: 740 EKRTENLQRRAVWVVERILRTDDIAYEVSGDPNVSTALVDAFQHADYRTRQIAERAL 796
E++++ A W + I + + D N+ L++ Q A++RTR+ A A+
Sbjct: 347 SSSKESIRKEACWTISNITAGNRAQIQAVIDANIFPVLIEILQKAEFRTRKEAAWAI 403
Score = 47 (21.6 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 15/51 (29%), Positives = 25/51 (49%)
Query: 583 VTFVLSDEPDAIALCCEHNLAALFIELLQSNGLDKVQMVSATALENLSLES 633
+T + S + E +FIELL S+ + VQ + AL N++ +S
Sbjct: 149 LTNIASGTSQQTKIVIEAGAVPIFIELLNSD-FEDVQEQAVWALGNIAGDS 198
Score = 45 (20.9 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 606 FIELLQSNGLDKVQMVSATALENLSLESKNLTKL 639
F+E L+ N +Q +A AL N++ + TK+
Sbjct: 129 FVEFLKRNENCTLQFEAAWALTNIASGTSQQTKI 162
Score = 39 (18.8 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 17/98 (17%), Positives = 39/98 (39%)
Query: 460 TISLVQFVEAPQNDLRLASIELIQNLSPHMGHELADALRGAVGQLGSLIRVISENVGISK 519
T +V+ + + +DL+LA+ + + L D + G + + + N +
Sbjct: 82 TREMVEMLFSDDSDLQLATTQKFRKLLSKEPSPPIDEVINTPGVVDRFVEFLKRNENCTL 141
Query: 520 EQAAAVGLLAELPERDLGLTRQMLDEGAFGLIFSRVKS 557
+ AA L + T+ +++ GA + + S
Sbjct: 142 QFEAAWAL-TNIASGTSQQTKIVIEAGAVPIFIELLNS 178
>TAIR|locus:2043709 [details] [associations]
symbol:AT2G45720 "AT2G45720" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0010413
"glucuronoxylan metabolic process" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR000225
InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
EMBL:CP002685 GenomeReviews:CT485783_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC003680 EMBL:AC004665
EMBL:BT015356 EMBL:BT015888 IPI:IPI00524023 PIR:T00885
RefSeq:NP_001031543.1 RefSeq:NP_182096.1 UniGene:At.28663
UniGene:At.36601 ProteinModelPortal:O64651 SMR:O64651 PaxDb:O64651
EnsemblPlants:AT2G45720.1 EnsemblPlants:AT2G45720.2 GeneID:819180
KEGG:ath:AT2G45720 TAIR:At2g45720 eggNOG:NOG268795
HOGENOM:HOG000239669 InParanoid:O64651 OMA:RSIVGHG PhylomeDB:O64651
ProtClustDB:CLSN2683369 ArrayExpress:O64651 Genevestigator:O64651
Uniprot:O64651
Length = 553
Score = 133 (51.9 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 53/245 (21%), Positives = 124/245 (50%)
Query: 152 IPMIIDMLKSSSRKVRCTALETLRIVVEEDDDNKEILGQGDTVRTIVKFLSHELSREREE 211
+P +I +L+S S + A+ +L+ + + ++ I+G G V +++ S +
Sbjct: 234 LPSLIRLLESGSIVAKEKAVISLQRMSISSETSRSIVGHGG-VGPLIEICKTGDSVSQSA 292
Query: 212 AVSLLYELSKSEALCEKIGSINGAILILVGMTSSKSENLLTVEKAEKTLANLEKCENNVR 271
+ L +S + + + G + +++ + + L + E A + L NL +R
Sbjct: 293 SACTLKNISAVPEVRQNLAE-EGIVKVMINILNC-GILLGSKEYAAECLQNLTSSNETLR 350
Query: 272 Q--MAENGRLQPLLTQILEGPQETKLSLAAF---LGDLALNSDVKVLVARTVGSCLINIM 326
+ ++ENG +Q LL L+GP + +AA +G +++ + K++ + L++++
Sbjct: 351 RSVISENG-IQTLLAY-LDGPLPQESGVAAIRNLVGSVSVETYFKIIPS------LVHVL 402
Query: 327 KSGNMQAREAALKALNQISSCEPSAKVLIHAGILPPLVKDLFTVGSNHLPMRLKEVSATI 386
KSG++ A++AA + +I++ + +++ +G +P L++ L S +EV+A
Sbjct: 403 KSGSIGAQQAAASTICRIATSNETKRMIGESGCIPLLIRMLEAKASG-----AREVAAQA 457
Query: 387 LANVV 391
+A++V
Sbjct: 458 IASLV 462
>UNIPROTKB|Q5ZMC3 [details] [associations]
symbol:WDSUB1 "WD repeat, SAM and U-box domain-containing
protein 1" species:9031 "Gallus gallus" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50105
PROSITE:PS50294 SMART:SM00320 SMART:SM00454 SMART:SM00504
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 InterPro:IPR021129 Pfam:PF00536 SUPFAM:SSF47769
GO:GO:0004842 GeneTree:ENSGT00700000104017 GO:GO:0000151
HSSP:P16649 EMBL:AJ719461 IPI:IPI00588518 UniGene:Gga.5996
ProteinModelPortal:Q5ZMC3 Ensembl:ENSGALT00000020533
HOGENOM:HOG000231980 HOVERGEN:HBG080511 InParanoid:Q5ZMC3
OrthoDB:EOG4NCMCJ Uniprot:Q5ZMC3
Length = 476
Score = 132 (51.5 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 26/70 (37%), Positives = 41/70 (58%)
Query: 31 DAFVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTDLNPS 90
D F+CP+T+++M+DPV +G ++E+EA+E W N R+ P+T L S L P+
Sbjct: 406 DEFLCPITRELMKDPVIAADGYSYEKEAMENWIS----NNRRS-SPMTNLPLPSLVLTPN 460
Query: 91 IALRNTIEEW 100
L+ I W
Sbjct: 461 RTLKMAISRW 470
>TAIR|locus:2198190 [details] [associations]
symbol:PUB54 "plant U-box 54" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR006016
Pfam:PF00582 Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0006950
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC009273 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 HSSP:Q8VZ40
IPI:IPI00532514 PIR:F86147 RefSeq:NP_171674.2 UniGene:At.42636
ProteinModelPortal:Q9LQ92 SMR:Q9LQ92 EnsemblPlants:AT1G01680.1
GeneID:839251 KEGG:ath:AT1G01680 TAIR:At1g01680 eggNOG:NOG331289
HOGENOM:HOG000115795 InParanoid:Q9LQ92 OMA:RDICINK PhylomeDB:Q9LQ92
ProtClustDB:CLSN2917980 Genevestigator:Q9LQ92 Uniprot:Q9LQ92
Length = 308
Score = 128 (50.1 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 28/78 (35%), Positives = 42/78 (53%)
Query: 27 EPIYDAFVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTD 86
+P + F CP++ ++MRDP +G T+E E KW R GR P T K L + +
Sbjct: 231 DPRLEDFKCPISMEIMRDPHVAADGFTYEAEEFRKWL---RSGGR--TSPKTNKPLENHN 285
Query: 87 LNPSIALRNTIEEWNARN 104
L P+ LR I++W +N
Sbjct: 286 LVPNHTLRIIIKDWLEKN 303
>TAIR|locus:2099634 [details] [associations]
symbol:AT3G03440 "AT3G03440" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM] InterPro:IPR000225 InterPro:IPR016024
Pfam:PF00514 PROSITE:PS50176 SMART:SM00185 EMBL:CP002686
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
IPI:IPI00522077 RefSeq:NP_186994.2 UniGene:At.40980
ProteinModelPortal:F4J139 SMR:F4J139 EnsemblPlants:AT3G03440.1
GeneID:821253 KEGG:ath:AT3G03440 OMA:VRDERNK Uniprot:F4J139
Length = 408
Score = 130 (50.8 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 66/280 (23%), Positives = 126/280 (45%)
Query: 147 HNSELIPMIIDMLKSSSRKVRCTA--LETLRIVVEEDDDNKEILGQGDTVRTIVKFLSHE 204
H S+ + ++ ML+ S + A L L + V+ D+ NK + + + I+ FL
Sbjct: 101 HFSQAVEPLVSMLRFDSPESHHEAALLALLNLAVK-DEKNKVSIIEAGALEPIINFLQSN 159
Query: 205 LSREREEAVSLLYELSKSEALCEKIGSINGAILILVGMTSSKSENLLTVEKAEKTLANLE 264
+E A + L LS S IG+ NG + +LV + S A L+NL
Sbjct: 160 SPTLQEYASASLLTLSASANNKPIIGA-NGVVPLLVKVIKHGSPQAKA--DAVMALSNLS 216
Query: 265 KCENNVRQMAENGRLQPLLTQILEGPQETKLS--LAAFLGDLALNSD-VKVLVARTVGSC 321
+N+ + L P+L + + +K S + + L ++ + + + G
Sbjct: 217 TLPDNLSMILATKPLSPILNLLKSSKKSSKTSEKCCSLIEALMVSGEEARTGLVSDEGGV 276
Query: 322 L--INIMKSGNMQAREAALKALNQISSCEPSA--KVLIHAGILPPLVKDLFTVGSNHLPM 377
L + ++++G++QARE A+ L + + S + ++ G++P L+ +L G++
Sbjct: 277 LAVVEVLENGSLQAREHAVGVLLTLCQSDRSKYREPILREGVIPGLL-ELTVQGTSK--S 333
Query: 378 RLKEVSATILANVVNSGHDFDSITVGPDN-QTLVSEDIVH 416
R+K + +L + NS + V PD + +VS I H
Sbjct: 334 RIK--AQRLLCLLRNS--ESPRSEVQPDTIENIVSSLISH 369
>UNIPROTKB|F1LT58 [details] [associations]
symbol:F1LT58 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006606 "protein import into nucleus"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] InterPro:IPR000225 InterPro:IPR002652
InterPro:IPR016024 Pfam:PF00514 Pfam:PF01749 PROSITE:PS50176
PROSITE:PS51214 SMART:SM00185 GO:GO:0005634 GO:GO:0005737
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008565
GO:GO:0006606 GeneTree:ENSGT00610000085856 IPI:IPI00359040
PRIDE:F1LT58 Ensembl:ENSRNOT00000000139 Uniprot:F1LT58
Length = 415
Score = 128 (50.1 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 32/117 (27%), Positives = 59/117 (50%)
Query: 680 LLEGHAVEKLIALLDHTNEKVVEASLAALSTVIDDGVDIEQGVMVLCEAQGIKPILDVLL 739
+++ +L+ LL H + KV +L A+ ++ G DI+ V++ C A P L LL
Sbjct: 290 VIDSGVCRRLVELLMHNDYKVASPALRAVGNIVT-GDDIQTQVILNCSAL---PCLLHLL 345
Query: 740 EKRTENLQRRAVWVVERILRTDDIAYEVSGDPNVSTALVDAFQHADYRTRQIAERAL 796
E++++ A W + I + + D N+ L++ Q A++RTR+ A A+
Sbjct: 346 SSSKESIRKEACWTISNITAGNRAQIQAVIDANIFPVLIEILQKAEFRTRKEAAWAI 402
Score = 47 (21.6 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 15/51 (29%), Positives = 25/51 (49%)
Query: 583 VTFVLSDEPDAIALCCEHNLAALFIELLQSNGLDKVQMVSATALENLSLES 633
+T + S + E +FIELL S+ + VQ + AL N++ +S
Sbjct: 149 LTNIASGTSQQTKIVIEAGAVPIFIELLNSD-FEDVQEQAVWALGNIAGDS 198
Score = 40 (19.1 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 606 FIELLQSNGLDKVQMVSATALENLSLESKNLTKL 639
F+E L+ + +Q +A AL N++ + TK+
Sbjct: 129 FVEFLKRSENCTLQFEAAWALTNIASGTSQQTKI 162
>ZFIN|ZDB-GENE-050522-22 [details] [associations]
symbol:kpna5 "karyopherin alpha 5 (importin alpha
6)" species:7955 "Danio rerio" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0008565 "protein
transporter activity" evidence=IEA] [GO:0006606 "protein import
into nucleus" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR000225
InterPro:IPR002652 InterPro:IPR016024 InterPro:IPR024931
Pfam:PF00514 Pfam:PF01749 PIRSF:PIRSF005673 PROSITE:PS50176
PROSITE:PS51214 SMART:SM00185 ZFIN:ZDB-GENE-050522-22 GO:GO:0005634
GO:GO:0005737 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0008565 eggNOG:COG5064 GO:GO:0006606 HOGENOM:HOG000167616
GeneTree:ENSGT00610000085856 HSSP:Q02821 EMBL:BC095356
IPI:IPI00499956 RefSeq:NP_001018163.1 UniGene:Dr.38262
ProteinModelPortal:Q503E9 Ensembl:ENSDART00000102027 GeneID:553205
KEGG:dre:553205 CTD:3841 InParanoid:Q503E9 OrthoDB:EOG4NP739
NextBio:20879995 Bgee:Q503E9 Uniprot:Q503E9
Length = 536
Score = 140 (54.3 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 56/195 (28%), Positives = 89/195 (45%)
Query: 609 LLQSNGLDKVQMVSATALENLSLESKNLTKLPELPPSGFCASIFP--CFSKQP-VITGLC 665
L +SN L + + AL NL KN P+ C S+ FS P V+ C
Sbjct: 218 LAKSNRLTTTRN-AVWALSNLC-RGKNPP--PDFAKVSPCLSVLSRLLFSSDPDVLADAC 273
Query: 666 ----RLHRGLCSLKETFCLLEGHAVEKLIALLDHTNEKVVEASLAALSTVIDDGVDIEQG 721
L G +T +++ +L+ LL H++ KVV +L A+ ++ G DI+
Sbjct: 274 WALSYLSDGPNDKIQT--VIDSGVCRRLVELLMHSDYKVVSPALRAVGNIVT-GDDIQTQ 330
Query: 722 VMVLCEAQGIKPILDVLLEKRTENLQRRAVWVVERILRTDDIAYEVSGDPNVSTALVDAF 781
V++ C A P L LL E++++ A W V I + + D NV L++
Sbjct: 331 VILNCSAL---PCLLHLLSSPKESIKKEACWTVSNITAGNRAQIQAVIDSNVFPVLIEIL 387
Query: 782 QHADYRTRQIAERAL 796
Q A++RTR+ A A+
Sbjct: 388 QKAEFRTRKEAAWAI 402
Score = 37 (18.1 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 325 IMKSGNMQAR-EAALKALNQISSCEPSAKVLIHAGILPPLVK 365
+ +S N + EAA N S KV+I G +P ++
Sbjct: 133 LRRSDNCTLQFEAAWALTNIASGTFQHTKVVIETGAVPIFIE 174
>TAIR|locus:2117343 [details] [associations]
symbol:AT4G25160 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0002238 "response
to molecule of fungal origin" evidence=RCA] InterPro:IPR000719
InterPro:IPR001245 InterPro:IPR003613 InterPro:IPR006016
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00582 Pfam:PF04564 Pfam:PF07714 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504 UniPathway:UPA00143
GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006950
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AL161562 GO:GO:0004842 EMBL:AL035523
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 EMBL:AL035396
HSSP:Q8VZ40 HOGENOM:HOG000237993 EMBL:BX828107 IPI:IPI00540343
PIR:T05537 RefSeq:NP_194246.2 UniGene:At.32287
ProteinModelPortal:Q9SW11 SMR:Q9SW11 IntAct:Q9SW11 PaxDb:Q9SW11
PRIDE:Q9SW11 EnsemblPlants:AT4G25160.1 GeneID:828619
KEGG:ath:AT4G25160 GeneFarm:2015 TAIR:At4g25160 InParanoid:Q9SW11
OMA:FQQELEI PhylomeDB:Q9SW11 ProtClustDB:CLSN2918598
Genevestigator:Q9SW11 Uniprot:Q9SW11
Length = 835
Score = 133 (51.9 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 28/70 (40%), Positives = 38/70 (54%)
Query: 33 FVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTDLNPSIA 92
F+CPL K VM +P +G T++R AIE+W KE N P+T L S +L P+
Sbjct: 770 FICPLLKDVMNEPCVAADGYTYDRHAIEEWLKE--HN----TSPMTDSPLHSKNLLPNYT 823
Query: 93 LRNTIEEWNA 102
L I EW +
Sbjct: 824 LYTAIMEWRS 833
>UNIPROTKB|G5E536 [details] [associations]
symbol:KPNA6 "Importin subunit alpha" species:9913 "Bos
taurus" [GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0006606 "protein import into nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000225 InterPro:IPR002652 InterPro:IPR016024
InterPro:IPR024931 Pfam:PF00514 Pfam:PF01749 PIRSF:PIRSF005673
PROSITE:PS50176 PROSITE:PS51214 SMART:SM00185 GO:GO:0005634
GO:GO:0005737 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0008565 GO:GO:0006606 GeneTree:ENSGT00610000085856
UniGene:Bt.91155 NextBio:20875492 OMA:HNDNKVA EMBL:DAAA02002928
EMBL:DAAA02002926 EMBL:DAAA02002927 Ensembl:ENSBTAT00000003764
Uniprot:G5E536
Length = 535
Score = 130 (50.8 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 32/117 (27%), Positives = 59/117 (50%)
Query: 680 LLEGHAVEKLIALLDHTNEKVVEASLAALSTVIDDGVDIEQGVMVLCEAQGIKPILDVLL 739
+++ +L+ LL H + KV +L A+ ++ G DI+ V++ C A P L LL
Sbjct: 289 VIDSGVCRRLVELLMHNDNKVASPALRAVGNIVT-GDDIQTQVILNCSAL---PCLLHLL 344
Query: 740 EKRTENLQRRAVWVVERILRTDDIAYEVSGDPNVSTALVDAFQHADYRTRQIAERAL 796
E++++ A W + I + + D N+ L++ Q A++RTR+ A A+
Sbjct: 345 SSSKESIRKEACWTISNITAGNRAQIQAVIDANIFPVLIEILQKAEFRTRKEAAWAI 401
Score = 47 (21.6 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 15/51 (29%), Positives = 25/51 (49%)
Query: 583 VTFVLSDEPDAIALCCEHNLAALFIELLQSNGLDKVQMVSATALENLSLES 633
+T + S + E +FIELL S+ + VQ + AL N++ +S
Sbjct: 148 LTNIASGTSQQTKIVIEAGAVPIFIELLNSD-FEDVQEQAVWALGNIAGDS 197
Score = 45 (20.9 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 606 FIELLQSNGLDKVQMVSATALENLSLESKNLTKL 639
F+E L+ N +Q +A AL N++ + TK+
Sbjct: 128 FVEFLKRNENCTLQFEAAWALTNIASGTSQQTKI 161
>UNIPROTKB|Q0V7M0 [details] [associations]
symbol:KPNA6 "Importin subunit alpha-7" species:9913 "Bos
taurus" [GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0006606 "protein import into nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000225 InterPro:IPR002652 InterPro:IPR016024
InterPro:IPR024931 Pfam:PF00514 Pfam:PF01749 PIRSF:PIRSF005673
PROSITE:PS50176 PROSITE:PS51214 SMART:SM00185 GO:GO:0005634
GO:GO:0005737 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0008565 eggNOG:COG5064 GO:GO:0006606 HOGENOM:HOG000167616
HOVERGEN:HBG001846 OrthoDB:EOG4NP739 EMBL:BT026550 IPI:IPI00734380
RefSeq:NP_001069422.1 UniGene:Bt.91155 ProteinModelPortal:Q0V7M0
SMR:Q0V7M0 STRING:Q0V7M0 PRIDE:Q0V7M0 GeneID:531602 KEGG:bta:531602
CTD:23633 InParanoid:Q0V7M0 NextBio:20875492 Uniprot:Q0V7M0
Length = 536
Score = 130 (50.8 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 32/117 (27%), Positives = 59/117 (50%)
Query: 680 LLEGHAVEKLIALLDHTNEKVVEASLAALSTVIDDGVDIEQGVMVLCEAQGIKPILDVLL 739
+++ +L+ LL H + KV +L A+ ++ G DI+ V++ C A P L LL
Sbjct: 290 VIDSGVCRRLVELLMHNDNKVASPALRAVGNIVT-GDDIQTQVILNCSAL---PCLLHLL 345
Query: 740 EKRTENLQRRAVWVVERILRTDDIAYEVSGDPNVSTALVDAFQHADYRTRQIAERAL 796
E++++ A W + I + + D N+ L++ Q A++RTR+ A A+
Sbjct: 346 SSSKESIRKEACWTISNITAGNRAQIQAVIDANIFPVLIEILQKAEFRTRKEAAWAI 402
Score = 47 (21.6 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 15/51 (29%), Positives = 25/51 (49%)
Query: 583 VTFVLSDEPDAIALCCEHNLAALFIELLQSNGLDKVQMVSATALENLSLES 633
+T + S + E +FIELL S+ + VQ + AL N++ +S
Sbjct: 149 LTNIASGTSQQTKIVIEAGAVPIFIELLNSD-FEDVQEQAVWALGNIAGDS 198
Score = 45 (20.9 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 606 FIELLQSNGLDKVQMVSATALENLSLESKNLTKL 639
F+E L+ N +Q +A AL N++ + TK+
Sbjct: 129 FVEFLKRNENCTLQFEAAWALTNIASGTSQQTKI 162
>TAIR|locus:2201205 [details] [associations]
symbol:AT1G23180 "AT1G23180" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
"chloroplast" evidence=IDA] [GO:0009570 "chloroplast stroma"
evidence=IDA] InterPro:IPR000225 InterPro:IPR016024 Pfam:PF00514
PROSITE:PS50176 SMART:SM00185 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009570 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 InterPro:IPR019308
PANTHER:PTHR13448 EMBL:BT002042 EMBL:BT008799 EMBL:AK226976
IPI:IPI00522633 RefSeq:NP_173731.2 UniGene:At.43289
UniGene:At.50936 ProteinModelPortal:Q8H0U3 SMR:Q8H0U3 PRIDE:Q8H0U3
ProMEX:Q8H0U3 EnsemblPlants:AT1G23180.1 GeneID:838926
KEGG:ath:AT1G23180 TAIR:At1g23180 HOGENOM:HOG000029826
InParanoid:Q8H0U3 OMA:LGGKKCI PhylomeDB:Q8H0U3 ArrayExpress:Q8H0U3
Genevestigator:Q8H0U3 Uniprot:Q8H0U3
Length = 834
Score = 117 (46.2 bits), Expect = 7.5e-05, Sum P(3) = 7.5e-05
Identities = 38/163 (23%), Positives = 78/163 (47%)
Query: 208 EREEAVSLLYELSKSEALC-EKIGSINGAILILVGMTSSKSENLLTVEKAEKTLANLEKC 266
+RE+A+ L++ S C + I +G + ++V + KSE+ E A + ++
Sbjct: 120 DREQAIETLWKYSLGGKKCIDAIMQFHGCLNLIVNLL--KSESSSACEAAAGLIRSIASV 177
Query: 267 ENNVRQMAENGRLQPLLTQILEGPQ---ETKLSLAAFLGDLALNSDVKVLVAR-TVGSCL 322
+AE+G L+ + T +L P K L +L ++ +++ VA + L
Sbjct: 178 NLYRESVAESGALEEI-TALLSRPSLATVVKEQCICALWNLTVDEEIREKVADFDILRLL 236
Query: 323 INIMKSGNMQAREAALKALNQISSCEPSAKVLIHAGILPPLVK 365
I+ ++ ++ +EAA L ++ + K+L+ G++P L K
Sbjct: 237 ISFLEDDDVNVKEAAGGVLANLALSRSTHKILVEVGVIPKLAK 279
Score = 63 (27.2 bits), Expect = 7.5e-05, Sum P(3) = 7.5e-05
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 686 VEKLIALLDHTNEKVVEASLAALSTVIDDGVDIEQGVMVLCEAQGIKPILD-VLLEKRTE 744
+E L+ LL+ NE+ VEASL+ L + +D E ++ G P+L +++ +R +
Sbjct: 767 IEPLVKLLEERNERCVEASLSVLYNLT---MDSENHTAII--RAGAVPVLRRIVMSQRPQ 821
Score = 60 (26.2 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 14/43 (32%), Positives = 26/43 (60%)
Query: 702 EASLAALSTVIDDGVDIEQGVMVLCEAQGIKPILDVLLEKRTE 744
EA++ L+ ++ +GV + + L GI+P++ LLE+R E
Sbjct: 740 EAAVLELNKIVSEGVP--ESIQTLASQGGIEPLVK-LLEERNE 779
Score = 46 (21.3 bits), Expect = 7.5e-05, Sum P(3) = 7.5e-05
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 607 IELLQSNGLDKVQMVSATALENLSL 631
++LL +N + V++ AL+NLSL
Sbjct: 472 VQLLANNNKETVKLPVIRALKNLSL 496
>TAIR|locus:2013688 [details] [associations]
symbol:PUB17 "plant U-box 17" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0009626
"plant-type hypersensitive response" evidence=IGI] [GO:0009814
"defense response, incompatible interaction" evidence=IMP]
[GO:0009817 "defense response to fungus, incompatible interaction"
evidence=IGI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0009817 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 UniGene:At.17411 EMBL:AC068667
GO:GO:0000151 eggNOG:NOG329430 HOGENOM:HOG000238412 OMA:ENRAYIA
HSSP:Q8VZ40 EMBL:AY064045 EMBL:AY150512 IPI:IPI00523315 PIR:A86416
RefSeq:NP_174228.1 UniGene:At.27415 ProteinModelPortal:Q9C7R6
SMR:Q9C7R6 IntAct:Q9C7R6 STRING:Q9C7R6 PRIDE:Q9C7R6
EnsemblPlants:AT1G29340.1 GeneID:839808 KEGG:ath:AT1G29340
TAIR:At1g29340 InParanoid:Q9C7R6 PhylomeDB:Q9C7R6
ProtClustDB:CLSN2679704 Genevestigator:Q9C7R6 Uniprot:Q9C7R6
Length = 729
Score = 132 (51.5 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 65/259 (25%), Positives = 117/259 (45%)
Query: 33 FVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTDLNPSIA 92
FVCP++ +M DPV + GQT++R +I +W +E G CP T + L + + P+ A
Sbjct: 309 FVCPISLDLMTDPVIISTGQTYDRNSIARWIEE----GHC-TCPKTGQMLMDSRIVPNRA 363
Query: 93 LRNTIEEWNARNEAAQLDMARKSLNLGSSESDIMPALKYVQYFCQSSRSNKHVVHNSELI 152
L+N I +W + + S N S + +P V+ +NK V S LI
Sbjct: 364 LKNLIVQWCTASGISYESEFTDSPN--ESFASALPTKAAVE-------ANKATV--SILI 412
Query: 153 PMIIDMLKSS----SRKVRCTAL--ETLRIVVEEDDDNKEILGQGDTVRTIVKFLSHELS 206
+ D +++ +R++R A + R + E + + T ++ E S
Sbjct: 413 KYLADGSQAAQTVAAREIRLLAKTGKENRAYIAEAGAIPHLC----RLLTSENAIAQENS 468
Query: 207 REREEAVSLLYELSKSEALCEKIGSINGAILILV-GMTSSKSEN-------LLTVEKAEK 258
+S+ YE +KS + E+ + + +LV G+T EN L V + +K
Sbjct: 469 VTAMLNLSI-YEKNKSRIM-EEGDCLESIVSVLVSGLTVEAQENAAATLFSLSAVHEYKK 526
Query: 259 TLANLEKCENNVRQMAENG 277
+A +++C + + +NG
Sbjct: 527 RIAIVDQCVEALALLLQNG 545
>RGD|1561324 [details] [associations]
symbol:Kpna5 "karyopherin alpha 5 (importin alpha 6)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006606
"protein import into nucleus" evidence=IEA] [GO:0008565 "protein
transporter activity" evidence=IEA] InterPro:IPR000225
InterPro:IPR002652 InterPro:IPR016024 InterPro:IPR024931
Pfam:PF00514 Pfam:PF01749 PIRSF:PIRSF005673 PROSITE:PS50176
PROSITE:PS51214 SMART:SM00185 RGD:1561324 GO:GO:0005634
GO:GO:0005737 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0008565 eggNOG:COG5064 GO:GO:0006606 HOGENOM:HOG000167616
GeneTree:ENSGT00610000085856 HOVERGEN:HBG001846 HSSP:Q02821
CTD:3841 OrthoDB:EOG4NP739 EMBL:AY779029 IPI:IPI00371863
RefSeq:NP_001020284.1 UniGene:Rn.138147 ProteinModelPortal:Q56R16
SMR:Q56R16 STRING:Q56R16 PhosphoSite:Q56R16 PRIDE:Q56R16
Ensembl:ENSRNOT00000046268 GeneID:294392 KEGG:rno:294392
UCSC:RGD:1561324 InParanoid:Q56R16 NextBio:638106
Genevestigator:Q56R16 Uniprot:Q56R16
Length = 536
Score = 130 (50.8 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 58/213 (27%), Positives = 96/213 (45%)
Query: 596 LCCEHNLAALFIELL-QSNGLDKVQMVSATALENLSLESKNLTKLPELPPSGFCASIFPC 654
L CE + +ELL SN L + + AL NL KN PP F + + PC
Sbjct: 206 LNCE--ILPPLLELLTNSNRLTTTRN-AVWALSNLC-RGKN-------PPPNF-SKVSPC 253
Query: 655 --------FSKQP-VITGLCRLHRGLCS--LKETFCLLEGHAVEKLIALLDHTNEKVVEA 703
FS P V+ +C L + +++ +L+ LL H + KVV
Sbjct: 254 LNVLSRLLFSSDPDVLADVCWALSYLSDGPNDKIQVVIDSGVCRRLVELLMHNDYKVVSP 313
Query: 704 SLAALSTVIDDGVDIEQGVMVLCEAQGIKPILDVLLEKRTENLQRRAVWVVERILRTDDI 763
+L A+ ++ G DI+ V++ C A P L LL E++++ A W + I + +
Sbjct: 314 ALRAVGNIVT-GDDIQTQVILNCSAL---PCLLHLLGSPKESVRKEACWTISNITAGNRM 369
Query: 764 AYEVSGDPNVSTALVDAFQHADYRTRQIAERAL 796
+ D ++ L++ Q A++RTR+ A A+
Sbjct: 370 QIQAVIDGSIFPVLIEVLQKAEFRTRKEAAWAI 402
>TAIR|locus:2176177 [details] [associations]
symbol:AT5G51270 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 Pfam:PF04564
PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 EMBL:AB023044
HSSP:Q9WUD1 HOGENOM:HOG000237993 IPI:IPI00525770 RefSeq:NP_199940.1
UniGene:At.55484 ProteinModelPortal:Q9LU47 SMR:Q9LU47 PRIDE:Q9LU47
EnsemblPlants:AT5G51270.1 GeneID:835201 KEGG:ath:AT5G51270
GeneFarm:2016 TAIR:At5g51270 InParanoid:Q9LU47 OMA:ATHEAKE
PhylomeDB:Q9LU47 ProtClustDB:CLSN2916710 Genevestigator:Q9LU47
Uniprot:Q9LU47
Length = 819
Score = 132 (51.5 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 29/73 (39%), Positives = 41/73 (56%)
Query: 33 FVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTDLNPSIA 92
F CPL K VM++P +G T++R AIE+W EN R P+T L++ +L P+
Sbjct: 753 FFCPLLKDVMKEPCIAADGYTYDRRAIEEWM----ENHR--TSPVTNSPLQNVNLLPNHT 806
Query: 93 LRNTIEEWNARNE 105
L I EW RN+
Sbjct: 807 LYAAIVEWRNRNQ 819
>MGI|MGI:103560 [details] [associations]
symbol:Kpna1 "karyopherin (importin) alpha 1" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006606 "protein import into nucleus"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0030425 "dendrite" evidence=ISO]
[GO:0042307 "positive regulation of protein import into nucleus"
evidence=ISO] InterPro:IPR000225 InterPro:IPR002652
InterPro:IPR016024 InterPro:IPR024931 Pfam:PF00514 Pfam:PF01749
PIRSF:PIRSF005673 PROSITE:PS50176 PROSITE:PS51214 SMART:SM00185
MGI:MGI:103560 GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008565 eggNOG:COG5064
GO:GO:0006606 HOGENOM:HOG000167616 CTD:3836
GeneTree:ENSGT00610000085856 HOVERGEN:HBG001846 KO:K15042
OMA:ETEPNPP OrthoDB:EOG4QNMVZ EMBL:U34228 EMBL:AK028259
EMBL:AK028307 EMBL:AK154800 EMBL:AK169311 EMBL:AK169348
EMBL:BC006771 EMBL:U20619 IPI:IPI00311329 RefSeq:NP_032491.2
UniGene:Mm.6952 ProteinModelPortal:Q60960 SMR:Q60960 DIP:DIP-48614N
STRING:Q60960 PhosphoSite:Q60960 PaxDb:Q60960 PRIDE:Q60960
Ensembl:ENSMUST00000004054 GeneID:16646 KEGG:mmu:16646
UCSC:uc007zcb.1 InParanoid:Q60960 ChiTaRS:KPNA1 NextBio:290321
Bgee:Q60960 CleanEx:MM_KPNA1 Genevestigator:Q60960
GermOnline:ENSMUSG00000022905 Uniprot:Q60960
Length = 538
Score = 129 (50.5 bits), Expect = 0.00010, P = 0.00010
Identities = 33/117 (28%), Positives = 62/117 (52%)
Query: 680 LLEGHAVEKLIALLDHTNEKVVEASLAALSTVIDDGVDIEQGVMVLCEAQGIKPILDVLL 739
+++ +L+ LL H + KVV +L A+ ++ G DI+ V++ C A ++ +L LL
Sbjct: 292 VIDAGVCRRLVELLMHNDYKVVSPALRAVGNIVT-GDDIQTQVILNCSA--LQSLLH-LL 347
Query: 740 EKRTENLQRRAVWVVERILRTDDIAYEVSGDPNVSTALVDAFQHADYRTRQIAERAL 796
E++++ A W + I + + D N+ AL+ Q A++RTR+ A A+
Sbjct: 348 SSPKESIKKEACWTISNITAGNRAQIQTVIDANMFPALISILQTAEFRTRKEAAWAI 404
>FB|FBgn0031905 [details] [associations]
symbol:CG5155 species:7227 "Drosophila melanogaster"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR000225 InterPro:IPR016024 Pfam:PF00514
SMART:SM00185 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:AE014134 GeneTree:ENSGT00680000099702 EMBL:BT088789
RefSeq:NP_609111.1 UniGene:Dm.18251 SMR:Q9VM21 IntAct:Q9VM21
MINT:MINT-868196 STRING:Q9VM21 EnsemblMetazoa:FBtr0079438
GeneID:34014 KEGG:dme:Dmel_CG5155 UCSC:CG5155-RA
FlyBase:FBgn0031905 InParanoid:Q9VM21 OMA:QLAITTE OrthoDB:EOG4NS1SK
GenomeRNAi:34014 NextBio:786440 InterPro:IPR026959
PANTHER:PTHR23315:SF4 Uniprot:Q9VM21
Length = 669
Score = 130 (50.8 bits), Expect = 0.00011, P = 0.00011
Identities = 56/259 (21%), Positives = 121/259 (46%)
Query: 136 CQSSRSNKHVVHNSELIPMIIDMLKSSSRKVRCTALETLRIVVEEDDDNKEILGQGDTVR 195
C +SN+ + + +P ++ +L SS + + L+ E D D+ IL D VR
Sbjct: 404 CVRFQSNREQLRQAGGLPAMVSLLNSSHAPLLENLAKGLKECAE-DPDSMRILEDLDAVR 462
Query: 196 TIVKFLSHELSREREEAVSLLYE-LSKSEALCEKIGSINGAILILVGMTSSKSENLLTVE 254
I L + +R + A + + + E + S+ GA+ ++VG+ KS++++ +
Sbjct: 463 LIWSLLKNPTTRVQAHAAYAICPCVRNANDSAELVRSLVGAMELVVGLL--KSKDIMVLS 520
Query: 255 KAEKTLANLEKCENNVRQMAENGRLQPLLTQILEGPQETKLSLAAFLGDLAL--NSDVKV 312
+A + + + N+ + + + L + +++LAA + A N+ ++
Sbjct: 521 AVCAAIATIAQDQTNLAILTDLKVIYKLADLVQTTDDLLRMNLAAAVAACACFGNNTEEL 580
Query: 313 LVARTVGSCLINIMKSGNMQAREAALKALNQISSCEPSAKVLIH-AGILPPLVKDLFTVG 371
RTV + ++ M S N + AL ++S +P + +H +G++P L++ +G
Sbjct: 581 GRLRTV-TPIVTYMTSDNPLVHRSTAMALEKLSM-DPQNCITMHQSGVVPFLLE---CIG 635
Query: 372 SNHLPMRLKEVSATILANV 390
S + ++L +A L N+
Sbjct: 636 STNKELQL--AAAGCLRNI 652
>RGD|1306570 [details] [associations]
symbol:Kpna6 "karyopherin alpha 6 (importin alpha 7)"
species:10116 "Rattus norvegicus" [GO:0006606 "protein import into
nucleus" evidence=ISO] [GO:0008565 "protein transporter activity"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0060135
"maternal process involved in female pregnancy" evidence=ISO]
InterPro:IPR000225 InterPro:IPR002652 InterPro:IPR016024
InterPro:IPR024931 Pfam:PF00514 Pfam:PF01749 PIRSF:PIRSF005673
PROSITE:PS50176 PROSITE:PS51214 SMART:SM00185 RGD:1306570
GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0008565 GO:GO:0006606 HOVERGEN:HBG001846
IPI:IPI00359040 EMBL:AY779030 UniGene:Rn.139167
ProteinModelPortal:Q56R15 SMR:Q56R15 PRIDE:Q56R15
Genevestigator:Q56R15 Uniprot:Q56R15
Length = 533
Score = 128 (50.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 32/117 (27%), Positives = 59/117 (50%)
Query: 680 LLEGHAVEKLIALLDHTNEKVVEASLAALSTVIDDGVDIEQGVMVLCEAQGIKPILDVLL 739
+++ +L+ LL H + KV +L A+ ++ G DI+ V++ C A P L LL
Sbjct: 287 VIDSGVCRRLVELLMHNDYKVASPALRAVGNIVT-GDDIQTQVILNCSAL---PCLLHLL 342
Query: 740 EKRTENLQRRAVWVVERILRTDDIAYEVSGDPNVSTALVDAFQHADYRTRQIAERAL 796
E++++ A W + I + + D N+ L++ Q A++RTR+ A A+
Sbjct: 343 SSSKESIRKEACWTISNITAGNRAQIQAVIDANIFPVLIEILQKAEFRTRKEAAWAI 399
Score = 47 (21.6 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 15/51 (29%), Positives = 25/51 (49%)
Query: 583 VTFVLSDEPDAIALCCEHNLAALFIELLQSNGLDKVQMVSATALENLSLES 633
+T + S + E +FIELL S+ + VQ + AL N++ +S
Sbjct: 146 LTNIASGTSQQTKIVIEAGAVPIFIELLNSD-FEDVQEQAVWALGNIAGDS 195
Score = 40 (19.1 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 606 FIELLQSNGLDKVQMVSATALENLSLESKNLTKL 639
F+E L+ + +Q +A AL N++ + TK+
Sbjct: 126 FVEFLKRSENCTLQFEAAWALTNIASGTSQQTKI 159
>MGI|MGI:1100836 [details] [associations]
symbol:Kpna6 "karyopherin (importin) alpha 6" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006606 "protein import into nucleus"
evidence=IDA] [GO:0006810 "transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IDA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0060135 "maternal process involved in female pregnancy"
evidence=IMP] InterPro:IPR000225 InterPro:IPR002652
InterPro:IPR016024 InterPro:IPR024931 Pfam:PF00514 Pfam:PF01749
PIRSF:PIRSF005673 PROSITE:PS50176 PROSITE:PS51214 SMART:SM00185
MGI:MGI:1100836 GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008565 eggNOG:COG5064
GO:GO:0006606 HOGENOM:HOG000167616 HOVERGEN:HBG001846
OrthoDB:EOG4NP739 CTD:23633 ChiTaRS:KPNA6 EMBL:AK007053
EMBL:AK154882 EMBL:BC004833 EMBL:AF020773 IPI:IPI00649329
RefSeq:NP_032494.3 UniGene:Mm.202358 ProteinModelPortal:O35345
SMR:O35345 DIP:DIP-48616N STRING:O35345 PhosphoSite:O35345
PaxDb:O35345 PRIDE:O35345 Ensembl:ENSMUST00000102590 GeneID:16650
KEGG:mmu:16650 InParanoid:O35345 OMA:HNDNKVA NextBio:290337
Bgee:O35345 CleanEx:MM_KPNA6 Genevestigator:O35345
GermOnline:ENSMUSG00000003731 Uniprot:O35345
Length = 536
Score = 128 (50.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 32/117 (27%), Positives = 59/117 (50%)
Query: 680 LLEGHAVEKLIALLDHTNEKVVEASLAALSTVIDDGVDIEQGVMVLCEAQGIKPILDVLL 739
+++ +L+ LL H + KV +L A+ ++ G DI+ V++ C A P L LL
Sbjct: 290 VIDSGVCRRLVELLMHNDYKVASPALRAVGNIVT-GDDIQTQVILNCSAL---PCLLHLL 345
Query: 740 EKRTENLQRRAVWVVERILRTDDIAYEVSGDPNVSTALVDAFQHADYRTRQIAERAL 796
E++++ A W + I + + D N+ L++ Q A++RTR+ A A+
Sbjct: 346 SSSKESIRKEACWTISNITAGNRAQIQAVIDANIFPVLIEILQKAEFRTRKEAAWAI 402
Score = 47 (21.6 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 15/51 (29%), Positives = 25/51 (49%)
Query: 583 VTFVLSDEPDAIALCCEHNLAALFIELLQSNGLDKVQMVSATALENLSLES 633
+T + S + E +FIELL S+ + VQ + AL N++ +S
Sbjct: 149 LTNIASGTSQQTKIVIEAGAVPIFIELLNSD-FEDVQEQAVWALGNIAGDS 198
Score = 45 (20.9 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 606 FIELLQSNGLDKVQMVSATALENLSLESKNLTKL 639
F+E L+ N +Q +A AL N++ + TK+
Sbjct: 129 FVEFLKRNENCTLQFEAAWALTNIASGTSQQTKI 162
Score = 39 (18.8 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 17/98 (17%), Positives = 39/98 (39%)
Query: 460 TISLVQFVEAPQNDLRLASIELIQNLSPHMGHELADALRGAVGQLGSLIRVISENVGISK 519
T +V+ + + +DL+LA+ + + L D + G + + + N +
Sbjct: 82 TREMVEMLFSDDSDLQLATTQKFRKLLSKEPSPPIDEVINTPGVVDRFVEFLKRNENCTL 141
Query: 520 EQAAAVGLLAELPERDLGLTRQMLDEGAFGLIFSRVKS 557
+ AA L + T+ +++ GA + + S
Sbjct: 142 QFEAAWAL-TNIASGTSQQTKIVIEAGAVPIFIELLNS 178
>UNIPROTKB|F5H4G7 [details] [associations]
symbol:KPNA6 "Importin subunit alpha" species:9606 "Homo
sapiens" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006606 "protein import into nucleus"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] InterPro:IPR000225 InterPro:IPR002652
InterPro:IPR016024 InterPro:IPR024931 Pfam:PF00514 Pfam:PF01749
PIRSF:PIRSF005673 PROSITE:PS50176 PROSITE:PS51214 SMART:SM00185
GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0008565 GO:GO:0006606 EMBL:AL049795
EMBL:AL445248 HGNC:HGNC:6399 ChiTaRS:KPNA6 IPI:IPI01012685
ProteinModelPortal:F5H4G7 SMR:F5H4G7 PRIDE:F5H4G7
Ensembl:ENST00000537234 ArrayExpress:F5H4G7 Bgee:F5H4G7
Uniprot:F5H4G7
Length = 533
Score = 127 (49.8 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 32/117 (27%), Positives = 59/117 (50%)
Query: 680 LLEGHAVEKLIALLDHTNEKVVEASLAALSTVIDDGVDIEQGVMVLCEAQGIKPILDVLL 739
+++ +L+ LL H + KV +L A+ ++ G DI+ V++ C A P L LL
Sbjct: 287 VIDSGVCRRLVELLMHNDYKVASPALRAVGNIVT-GDDIQTQVILNCSAL---PCLLHLL 342
Query: 740 EKRTENLQRRAVWVVERILRTDDIAYEVSGDPNVSTALVDAFQHADYRTRQIAERAL 796
E++++ A W + I + + D N+ L++ Q A++RTR+ A A+
Sbjct: 343 SSPKESIRKEACWTISNITAGNRAQIQAVIDANIFPVLIEILQKAEFRTRKEAAWAI 399
Score = 47 (21.6 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 15/51 (29%), Positives = 25/51 (49%)
Query: 583 VTFVLSDEPDAIALCCEHNLAALFIELLQSNGLDKVQMVSATALENLSLES 633
+T + S + E +FIELL S+ + VQ + AL N++ +S
Sbjct: 146 LTNIASGTSQQTKIVIEAGAVPIFIELLNSD-FEDVQEQAVWALGNIAGDS 195
Score = 45 (20.9 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 606 FIELLQSNGLDKVQMVSATALENLSLESKNLTKL 639
F+E L+ N +Q +A AL N++ + TK+
Sbjct: 126 FVEFLKRNENCTLQFEAAWALTNIASGTSQQTKI 159
Score = 43 (20.2 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 335 EAALKALNQISSCEPSAKVLIHAGILPPLVK 365
EAA N S K++I AG +P ++
Sbjct: 141 EAAWALTNIASGTSQQTKIVIEAGAVPIFIE 171
>UNIPROTKB|Q5ZJZ0 [details] [associations]
symbol:KPNA6 "Importin subunit alpha" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006606 "protein import into nucleus"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] InterPro:IPR000225 InterPro:IPR002652
InterPro:IPR016024 InterPro:IPR024931 Pfam:PF00514 Pfam:PF01749
PIRSF:PIRSF005673 PROSITE:PS50176 PROSITE:PS51214 SMART:SM00185
GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0008565 eggNOG:COG5064 GO:GO:0006606
HOGENOM:HOG000167616 GeneTree:ENSGT00610000085856
HOVERGEN:HBG001846 OrthoDB:EOG4NP739 CTD:23633 OMA:HNDNKVA
EMBL:AADN02043767 EMBL:AJ720294 IPI:IPI00602141
RefSeq:NP_001012859.2 UniGene:Gga.5795 SMR:Q5ZJZ0
Ensembl:ENSGALT00000005346 GeneID:419656 KEGG:gga:419656
InParanoid:Q5ZJZ0 NextBio:20822682 Uniprot:Q5ZJZ0
Length = 533
Score = 127 (49.8 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 32/117 (27%), Positives = 59/117 (50%)
Query: 680 LLEGHAVEKLIALLDHTNEKVVEASLAALSTVIDDGVDIEQGVMVLCEAQGIKPILDVLL 739
+++ +L+ LL H + KV +L A+ ++ G DI+ V++ C A P L LL
Sbjct: 288 VIDSGVCRRLVELLMHNDYKVASPALRAVGNIVT-GDDIQTQVILNCSAL---PCLLHLL 343
Query: 740 EKRTENLQRRAVWVVERILRTDDIAYEVSGDPNVSTALVDAFQHADYRTRQIAERAL 796
E++++ A W + I + + D N+ L++ Q A++RTR+ A A+
Sbjct: 344 SSPKESIRKEACWTISNITAGNRAQIQAVIDANIFPVLIEILQKAEFRTRKEAAWAI 400
Score = 47 (21.6 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 15/51 (29%), Positives = 25/51 (49%)
Query: 583 VTFVLSDEPDAIALCCEHNLAALFIELLQSNGLDKVQMVSATALENLSLES 633
+T + S + E +FIELL S+ + VQ + AL N++ +S
Sbjct: 147 LTNIASGTSQQTKIVIEAGAVPIFIELLNSD-FEDVQEQAVWALGNIAGDS 196
Score = 43 (20.2 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 335 EAALKALNQISSCEPSAKVLIHAGILPPLVK 365
EAA N S K++I AG +P ++
Sbjct: 142 EAAWALTNIASGTSQQTKIVIEAGAVPIFIE 172
Score = 40 (19.1 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 606 FIELLQSNGLDKVQMVSATALENLSLESKNLTKL 639
F+E L+ + +Q +A AL N++ + TK+
Sbjct: 127 FVEFLKRSENCTLQFEAAWALTNIASGTSQQTKI 160
>UNIPROTKB|F1PM77 [details] [associations]
symbol:KPNA6 "Importin subunit alpha" species:9615 "Canis
lupus familiaris" [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0006606 "protein import into nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000225 InterPro:IPR002652
InterPro:IPR016024 InterPro:IPR024931 Pfam:PF00514 Pfam:PF01749
PIRSF:PIRSF005673 PROSITE:PS50176 PROSITE:PS51214 SMART:SM00185
GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0008565 GO:GO:0006606
GeneTree:ENSGT00610000085856 CTD:23633 EMBL:AAEX03001657
RefSeq:XP_864794.1 Ensembl:ENSCAFT00000017097 GeneID:487314
KEGG:cfa:487314 Uniprot:F1PM77
Length = 536
Score = 127 (49.8 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 32/117 (27%), Positives = 59/117 (50%)
Query: 680 LLEGHAVEKLIALLDHTNEKVVEASLAALSTVIDDGVDIEQGVMVLCEAQGIKPILDVLL 739
+++ +L+ LL H + KV +L A+ ++ G DI+ V++ C A P L LL
Sbjct: 290 VIDSGVCRRLVELLMHNDYKVASPALRAVGNIVT-GDDIQTQVILNCSAL---PCLLHLL 345
Query: 740 EKRTENLQRRAVWVVERILRTDDIAYEVSGDPNVSTALVDAFQHADYRTRQIAERAL 796
E++++ A W + I + + D N+ L++ Q A++RTR+ A A+
Sbjct: 346 SSPKESIRKEACWTISNITAGNRAQIQAVIDANIFPVLIEILQKAEFRTRKEAAWAI 402
Score = 47 (21.6 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 15/51 (29%), Positives = 25/51 (49%)
Query: 583 VTFVLSDEPDAIALCCEHNLAALFIELLQSNGLDKVQMVSATALENLSLES 633
+T + S + E +FIELL S+ + VQ + AL N++ +S
Sbjct: 149 LTNIASGTSQQTKIVIEAGAVPIFIELLNSD-FEDVQEQAVWALGNIAGDS 198
Score = 45 (20.9 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 606 FIELLQSNGLDKVQMVSATALENLSLESKNLTKL 639
F+E L+ N +Q +A AL N++ + TK+
Sbjct: 129 FVEFLKRNENCTLQFEAAWALTNIASGTSQQTKI 162
Score = 43 (20.2 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 335 EAALKALNQISSCEPSAKVLIHAGILPPLVK 365
EAA N S K++I AG +P ++
Sbjct: 144 EAAWALTNIASGTSQQTKIVIEAGAVPIFIE 174
Score = 39 (18.8 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 17/98 (17%), Positives = 39/98 (39%)
Query: 460 TISLVQFVEAPQNDLRLASIELIQNLSPHMGHELADALRGAVGQLGSLIRVISENVGISK 519
T +V+ + + +DL+LA+ + + L D + G + + + N +
Sbjct: 82 TREMVEMLFSDDSDLQLATTQKFRKLLSKEPSPPIDEVINTPGVVDRFVEFLKRNENCTL 141
Query: 520 EQAAAVGLLAELPERDLGLTRQMLDEGAFGLIFSRVKS 557
+ AA L + T+ +++ GA + + S
Sbjct: 142 QFEAAWAL-TNIASGTSQQTKIVIEAGAVPIFIELLNS 178
>UNIPROTKB|O60684 [details] [associations]
symbol:KPNA6 "Importin subunit alpha-7" species:9606 "Homo
sapiens" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008565 "protein transporter
activity" evidence=IEA] [GO:0006607 "NLS-bearing substrate import
into nucleus" evidence=TAS] InterPro:IPR000225 InterPro:IPR002652
InterPro:IPR016024 InterPro:IPR024931 Pfam:PF00514 Pfam:PF01749
PIRSF:PIRSF005673 PROSITE:PS50176 PROSITE:PS51214 SMART:SM00185
GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:CH471059 GO:GO:0008565 eggNOG:COG5064
GO:GO:0006607 EMBL:AL049795 HOVERGEN:HBG001846 OrthoDB:EOG4NP739
CTD:23633 EMBL:AF060543 EMBL:AK315490 EMBL:BT009843 EMBL:AL445248
EMBL:BC020520 IPI:IPI01015268 RefSeq:NP_036448.1 UniGene:Hs.470588
UniGene:Hs.711019 ProteinModelPortal:O60684 SMR:O60684
DIP:DIP-27609N IntAct:O60684 MINT:MINT-1144956 STRING:O60684
PhosphoSite:O60684 PaxDb:O60684 PRIDE:O60684 DNASU:23633
Ensembl:ENST00000373625 GeneID:23633 KEGG:hsa:23633 UCSC:uc001bug.3
GeneCards:GC01P032573 HGNC:HGNC:6399 HPA:HPA018863 MIM:610563
neXtProt:NX_O60684 PharmGKB:PA30190 InParanoid:O60684
PhylomeDB:O60684 ChiTaRS:KPNA6 GenomeRNAi:23633 NextBio:46411
ArrayExpress:O60684 Bgee:O60684 CleanEx:HS_KPNA6
Genevestigator:O60684 GermOnline:ENSG00000025800 Uniprot:O60684
Length = 536
Score = 127 (49.8 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 32/117 (27%), Positives = 59/117 (50%)
Query: 680 LLEGHAVEKLIALLDHTNEKVVEASLAALSTVIDDGVDIEQGVMVLCEAQGIKPILDVLL 739
+++ +L+ LL H + KV +L A+ ++ G DI+ V++ C A P L LL
Sbjct: 290 VIDSGVCRRLVELLMHNDYKVASPALRAVGNIVT-GDDIQTQVILNCSAL---PCLLHLL 345
Query: 740 EKRTENLQRRAVWVVERILRTDDIAYEVSGDPNVSTALVDAFQHADYRTRQIAERAL 796
E++++ A W + I + + D N+ L++ Q A++RTR+ A A+
Sbjct: 346 SSPKESIRKEACWTISNITAGNRAQIQAVIDANIFPVLIEILQKAEFRTRKEAAWAI 402
Score = 47 (21.6 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 15/51 (29%), Positives = 25/51 (49%)
Query: 583 VTFVLSDEPDAIALCCEHNLAALFIELLQSNGLDKVQMVSATALENLSLES 633
+T + S + E +FIELL S+ + VQ + AL N++ +S
Sbjct: 149 LTNIASGTSQQTKIVIEAGAVPIFIELLNSD-FEDVQEQAVWALGNIAGDS 198
Score = 45 (20.9 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 606 FIELLQSNGLDKVQMVSATALENLSLESKNLTKL 639
F+E L+ N +Q +A AL N++ + TK+
Sbjct: 129 FVEFLKRNENCTLQFEAAWALTNIASGTSQQTKI 162
Score = 43 (20.2 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 335 EAALKALNQISSCEPSAKVLIHAGILPPLVK 365
EAA N S K++I AG +P ++
Sbjct: 144 EAAWALTNIASGTSQQTKIVIEAGAVPIFIE 174
>UNIPROTKB|J9NST3 [details] [associations]
symbol:KPNA6 "Importin subunit alpha" species:9615 "Canis
lupus familiaris" [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0006606 "protein import into nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000225 InterPro:IPR002652
InterPro:IPR016024 InterPro:IPR024931 Pfam:PF00514 Pfam:PF01749
PIRSF:PIRSF005673 PROSITE:PS50176 PROSITE:PS51214 SMART:SM00185
GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0008565 GO:GO:0006606
GeneTree:ENSGT00610000085856 OMA:HNDNKVA EMBL:AAEX03001657
Ensembl:ENSCAFT00000048326 Uniprot:J9NST3
Length = 539
Score = 127 (49.8 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 32/117 (27%), Positives = 59/117 (50%)
Query: 680 LLEGHAVEKLIALLDHTNEKVVEASLAALSTVIDDGVDIEQGVMVLCEAQGIKPILDVLL 739
+++ +L+ LL H + KV +L A+ ++ G DI+ V++ C A P L LL
Sbjct: 290 VIDSGVCRRLVELLMHNDYKVASPALRAVGNIVT-GDDIQTQVILNCSAL---PCLLHLL 345
Query: 740 EKRTENLQRRAVWVVERILRTDDIAYEVSGDPNVSTALVDAFQHADYRTRQIAERAL 796
E++++ A W + I + + D N+ L++ Q A++RTR+ A A+
Sbjct: 346 SSPKESIRKEACWTISNITAGNRAQIQAVIDANIFPVLIEILQKAEFRTRKEAAWAI 402
Score = 47 (21.6 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 15/51 (29%), Positives = 25/51 (49%)
Query: 583 VTFVLSDEPDAIALCCEHNLAALFIELLQSNGLDKVQMVSATALENLSLES 633
+T + S + E +FIELL S+ + VQ + AL N++ +S
Sbjct: 149 LTNIASGTSQQTKIVIEAGAVPIFIELLNSD-FEDVQEQAVWALGNIAGDS 198
Score = 45 (20.9 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 606 FIELLQSNGLDKVQMVSATALENLSLESKNLTKL 639
F+E L+ N +Q +A AL N++ + TK+
Sbjct: 129 FVEFLKRNENCTLQFEAAWALTNIASGTSQQTKI 162
Score = 43 (20.2 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 335 EAALKALNQISSCEPSAKVLIHAGILPPLVK 365
EAA N S K++I AG +P ++
Sbjct: 144 EAAWALTNIASGTSQQTKIVIEAGAVPIFIE 174
Score = 39 (18.8 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 17/98 (17%), Positives = 39/98 (39%)
Query: 460 TISLVQFVEAPQNDLRLASIELIQNLSPHMGHELADALRGAVGQLGSLIRVISENVGISK 519
T +V+ + + +DL+LA+ + + L D + G + + + N +
Sbjct: 82 TREMVEMLFSDDSDLQLATTQKFRKLLSKEPSPPIDEVINTPGVVDRFVEFLKRNENCTL 141
Query: 520 EQAAAVGLLAELPERDLGLTRQMLDEGAFGLIFSRVKS 557
+ AA L + T+ +++ GA + + S
Sbjct: 142 QFEAAWAL-TNIASGTSQQTKIVIEAGAVPIFIELLNS 178
>UNIPROTKB|F5GYL8 [details] [associations]
symbol:KPNA6 "Importin subunit alpha" species:9606 "Homo
sapiens" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006606 "protein import into nucleus"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] InterPro:IPR000225 InterPro:IPR002652
InterPro:IPR016024 InterPro:IPR024931 Pfam:PF00514 Pfam:PF01749
PIRSF:PIRSF005673 PROSITE:PS50176 PROSITE:PS51214 SMART:SM00185
GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0008565 GO:GO:0006606 EMBL:AL049795
EMBL:AL445248 HGNC:HGNC:6399 ChiTaRS:KPNA6 OMA:HNDNKVA
IPI:IPI00747764 ProteinModelPortal:F5GYL8 SMR:F5GYL8 PRIDE:F5GYL8
Ensembl:ENST00000545542 UCSC:uc010ogy.2 ArrayExpress:F5GYL8
Bgee:F5GYL8 Uniprot:F5GYL8
Length = 541
Score = 127 (49.8 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 32/117 (27%), Positives = 59/117 (50%)
Query: 680 LLEGHAVEKLIALLDHTNEKVVEASLAALSTVIDDGVDIEQGVMVLCEAQGIKPILDVLL 739
+++ +L+ LL H + KV +L A+ ++ G DI+ V++ C A P L LL
Sbjct: 295 VIDSGVCRRLVELLMHNDYKVASPALRAVGNIVT-GDDIQTQVILNCSAL---PCLLHLL 350
Query: 740 EKRTENLQRRAVWVVERILRTDDIAYEVSGDPNVSTALVDAFQHADYRTRQIAERAL 796
E++++ A W + I + + D N+ L++ Q A++RTR+ A A+
Sbjct: 351 SSPKESIRKEACWTISNITAGNRAQIQAVIDANIFPVLIEILQKAEFRTRKEAAWAI 407
Score = 47 (21.6 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 15/51 (29%), Positives = 25/51 (49%)
Query: 583 VTFVLSDEPDAIALCCEHNLAALFIELLQSNGLDKVQMVSATALENLSLES 633
+T + S + E +FIELL S+ + VQ + AL N++ +S
Sbjct: 154 LTNIASGTSQQTKIVIEAGAVPIFIELLNSD-FEDVQEQAVWALGNIAGDS 203
Score = 45 (20.9 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 606 FIELLQSNGLDKVQMVSATALENLSLESKNLTKL 639
F+E L+ N +Q +A AL N++ + TK+
Sbjct: 134 FVEFLKRNENCTLQFEAAWALTNIASGTSQQTKI 167
Score = 43 (20.2 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 335 EAALKALNQISSCEPSAKVLIHAGILPPLVK 365
EAA N S K++I AG +P ++
Sbjct: 149 EAAWALTNIASGTSQQTKIVIEAGAVPIFIE 179
>UNIPROTKB|Q5ZML1 [details] [associations]
symbol:KPNA1 "Importin subunit alpha-1" species:9031
"Gallus gallus" [GO:0006606 "protein import into nucleus"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0042307
"positive regulation of protein import into nucleus" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0030425 "dendrite"
evidence=ISS] InterPro:IPR000225 InterPro:IPR002652
InterPro:IPR016024 InterPro:IPR024931 Pfam:PF00514 Pfam:PF01749
PIRSF:PIRSF005673 PROSITE:PS50176 PROSITE:PS51214 SMART:SM00185
GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0008565 eggNOG:COG5064 GO:GO:0006606
HOGENOM:HOG000167616 CTD:3836 GeneTree:ENSGT00610000085856
HOVERGEN:HBG001846 KO:K15042 OMA:ETEPNPP OrthoDB:EOG4QNMVZ
EMBL:AJ719373 IPI:IPI00583750 RefSeq:NP_001025945.1
UniGene:Gga.21666 HSSP:Q02821 ProteinModelPortal:Q5ZML1 SMR:Q5ZML1
STRING:Q5ZML1 PRIDE:Q5ZML1 Ensembl:ENSGALT00000035021 GeneID:418271
KEGG:gga:418271 InParanoid:Q5ZML1 NextBio:20821469
ArrayExpress:Q5ZML1 Uniprot:Q5ZML1
Length = 538
Score = 127 (49.8 bits), Expect = 0.00017, P = 0.00017
Identities = 32/117 (27%), Positives = 63/117 (53%)
Query: 680 LLEGHAVEKLIALLDHTNEKVVEASLAALSTVIDDGVDIEQGVMVLCEAQGIKPILDVLL 739
+++ +L+ LL H + KVV +L A+ ++ G DI+ V++ C A ++ +L LL
Sbjct: 292 VIDAGVCRRLVELLMHNDYKVVSPALRAVGNIVT-GDDIQTQVILNCSA--LQSLLH-LL 347
Query: 740 EKRTENLQRRAVWVVERILRTDDIAYEVSGDPNVSTALVDAFQHADYRTRQIAERAL 796
E++++ A W + I + + D ++ AL++ Q A++RTR+ A A+
Sbjct: 348 SSPKESIKKEACWTISNITAGNRAQIQTVIDAHIFPALINILQTAEFRTRKEAAWAI 404
Score = 117 (46.2 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 74/361 (20%), Positives = 159/361 (44%)
Query: 80 KELRSTDLNPSIALRNTIEEWNARNEAAQLDMARKSLNLGSSESDIMPALKYVQYFCQSS 139
K ++ LNP R EE + + + K N+ ++E + + F ++
Sbjct: 12 KSYKNKSLNPDEMRRRREEEGLQLRKQKREEQLFKRRNVATAEEEAEEEVMSDGGFHEAQ 71
Query: 140 RSNKHVVHNSELIPMIIDMLKSSSRKVRCTALETLRIVVEEDDDNK--EILGQGDTVRTI 197
+N + ++ + +I+M+ S+S + + +A + R ++ ++ + E++ V
Sbjct: 72 MNNMEMTSSAVITSDMIEMIFSNSPEQQLSATQKFRKLLSKEPNPPIDEVISTPGVVARF 131
Query: 198 VKFLSHELSRERE-EAVSLLYELSKSEALCEKIGSINGAILILVGMTSSKSENLLTVEKA 256
V+FL + + + EA +L ++ +L +I GA+ I + + SS+ E++ E+A
Sbjct: 132 VEFLKRKENCTLQFEAAWVLTNIASGNSLQTRIVIQAGAVPIFIELLSSEFEDVQ--EQA 189
Query: 257 EKTLANLEKCENNVRQMAENGRLQPLLTQILEGPQETKLSLAAF--LGDLALNSDVKVLV 314
L N+ R + + P L Q+L ++ A L +L +
Sbjct: 190 VWALGNIAGDSTMCRDYVLDCNILPPLLQLLSKQNRITMTRNAVWALSNLCRGKNPPPDF 249
Query: 315 ARTVGSCL--IN-IMKSGNMQAREAALKALNQISSCEPSAKV--LIHAGILPPLVKDLFT 369
A+ V CL ++ ++ + A AL+ +S P+ K+ +I AG+ LV+ L
Sbjct: 250 AK-VSPCLSVLSWLLFVNDTDVLADACWALSYLSD-GPNDKIQAVIDAGVCRRLVELLM- 306
Query: 370 VGSNHLPMRLKEVSATILANVVNSGHDFDSITVGPDNQTLVSEDIVHNLLHLISNTGPTI 429
H ++ + + N+V +G D + Q +++ + +LLHL+S+ +I
Sbjct: 307 ----HNDYKVVSPALRAVGNIV-TGDDIQT-------QVILNCSALQSLLHLLSSPKESI 354
Query: 430 E 430
+
Sbjct: 355 K 355
Score = 55 (24.4 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 21/91 (23%), Positives = 42/91 (46%)
Query: 680 LLEGHAVEKLIALLDHTNEKVVEASLAALSTVIDDGVDIEQ----GVMVLC----EAQGI 731
L+E ++ L LL + K+V+ +L+ L ++ G + G+ C EA G+
Sbjct: 419 LVELGCIKPLCDLLTVMDSKIVQVALSGLENILRLGEQESKRSGAGINPYCALIEEAYGL 478
Query: 732 KPILDVLLEKRTENLQRRAVWVVERILRTDD 762
I + L + + ++A ++E T+D
Sbjct: 479 DKI-EFLQSHENQEIYQKAFDLIEHYFGTED 508
>TAIR|locus:2146213 [details] [associations]
symbol:AT5G18340 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
ProtClustDB:CLSN2686550 IPI:IPI00517179 RefSeq:NP_197335.1
UniGene:At.54899 ProteinModelPortal:Q3E9F5 SMR:Q3E9F5
EnsemblPlants:AT5G18340.1 GeneID:831952 KEGG:ath:AT5G18340
TAIR:At5g18340 eggNOG:NOG267360 InParanoid:Q3E9F5 OMA:ISPHERV
PhylomeDB:Q3E9F5 Genevestigator:Q3E9F5 Uniprot:Q3E9F5
Length = 456
Score = 96 (38.9 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 22/73 (30%), Positives = 34/73 (46%)
Query: 33 FVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTDLNPSIA 92
F C L+K +M DPV + +GQT+E+ I +W CP ++ L L P+
Sbjct: 78 FKCTLSKTIMIDPVIIFSGQTYEKRYITEWLNH------DLTCPTAKQVLYRVCLTPNHL 131
Query: 93 LRNTIEEWNARNE 105
+ I W N+
Sbjct: 132 INELITRWCLANK 144
Score = 77 (32.2 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 29/118 (24%), Positives = 56/118 (47%)
Query: 254 EKAEKTLANLEKCENNVRQMAENGRLQPLLTQIL-EGPQETKLSLAAFLGDLALNSDVKV 312
E L N+ E N +AEN ++ PLL + + +G T+ + L L+ K+
Sbjct: 234 ENIVTALFNMSTFEKNKTVLAENHQVIPLLAKSMKQGSVVTRRNATLTLASLSDIDSNKI 293
Query: 313 LVARTVG-SCLINIM-KSGNMQAREAALKALNQISSCE-PSAKVLIHAGILPPLVKDL 367
++ +V LI+++ + ++ A AL A+ + E + K I G+ P +K++
Sbjct: 294 IIGNSVALKALIDLIGELDDLSATHDALCAVIDLCCDERENWKKAISLGLAPAAIKNI 351
>UNIPROTKB|I3L9F7 [details] [associations]
symbol:KPNA1 "Importin subunit alpha" species:9823 "Sus
scrofa" [GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0006606 "protein import into nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000225 InterPro:IPR016024 InterPro:IPR024931
Pfam:PF00514 PIRSF:PIRSF005673 PROSITE:PS50176 SMART:SM00185
GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0008565 GO:GO:0006606
GeneTree:ENSGT00610000085856 OMA:ETEPNPP EMBL:FP312849
Ensembl:ENSSSCT00000024440 Uniprot:I3L9F7
Length = 459
Score = 131 (51.2 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 33/117 (28%), Positives = 62/117 (52%)
Query: 680 LLEGHAVEKLIALLDHTNEKVVEASLAALSTVIDDGVDIEQGVMVLCEAQGIKPILDVLL 739
+++ +L+ LL H + KVV +L A+ ++ G DI+ V++ C A ++ +L LL
Sbjct: 213 VIDAGVCRRLVELLMHNDYKVVSPALRAVGNIVT-GDDIQTQVILNCSA--LQSLLH-LL 268
Query: 740 EKRTENLQRRAVWVVERILRTDDIAYEVSGDPNVSTALVDAFQHADYRTRQIAERAL 796
E++++ A W + I + + D N+ AL+ Q A++RTR+ A A+
Sbjct: 269 SSPKESIKKEACWTISNITAGNRAQIQTVIDANIFPALISILQTAEFRTRKEAAWAI 325
Score = 40 (19.1 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 17/68 (25%), Positives = 30/68 (44%)
Query: 574 EGLLSVLARVTFVLSDEPDAIA--LCCEHNLAALFIELLQSNGLDKVQMVSATALENLSL 631
E LS + +LS EP+ + + A F+E L+ +Q SA L N++
Sbjct: 18 EQQLSATQKFRKLLSKEPNPPIDEVISTPGVVARFVEFLKRKENCTLQFESAWVLTNIAS 77
Query: 632 ESKNLTKL 639
+ T++
Sbjct: 78 GNSLQTRI 85
>SGD|S000005133 [details] [associations]
symbol:SRP1 "Karyopherin alpha homolog" species:4932
"Saccharomyces cerevisiae" [GO:0015031 "protein transport"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0016021
"integral to membrane" evidence=ISM] [GO:0006612 "protein targeting
to membrane" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0006606 "protein import into nucleus"
evidence=IEA;IMP] [GO:0008565 "protein transporter activity"
evidence=IEA;IDA] [GO:0000176 "nuclear exosome (RNase complex)"
evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR000225 InterPro:IPR002652 InterPro:IPR016024
InterPro:IPR024931 Pfam:PF00514 Pfam:PF01749 PIRSF:PIRSF005673
PROSITE:PS50176 PROSITE:PS51214 SMART:SM00185 SGD:S000005133
GO:GO:0016021 GO:GO:0005634 GO:GO:0005737 GO:GO:0048471
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0006612
GO:GO:0008565 EMBL:BK006947 eggNOG:COG5064 GO:GO:0006606 PDB:1WA5
PDBsum:1WA5 HOGENOM:HOG000167616 OMA:QPDWTTI
GeneTree:ENSGT00610000085856 OrthoDB:EOG408RH7 EMBL:M75849
EMBL:Z71465 PIR:S30884 RefSeq:NP_014210.1 PDB:1BK5 PDB:1BK6
PDB:1EE4 PDB:1EE5 PDB:1UN0 PDB:2C1T PDBsum:1BK5 PDBsum:1BK6
PDBsum:1EE4 PDBsum:1EE5 PDBsum:1UN0 PDBsum:2C1T
ProteinModelPortal:Q02821 SMR:Q02821 DIP:DIP-728N IntAct:Q02821
MINT:MINT-386354 STRING:Q02821 PaxDb:Q02821 PeptideAtlas:Q02821
EnsemblFungi:YNL189W GeneID:855532 KEGG:sce:YNL189W CYGD:YNL189w
EvolutionaryTrace:Q02821 NextBio:979583 Genevestigator:Q02821
GermOnline:YNL189W Uniprot:Q02821
Length = 542
Score = 111 (44.1 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 28/106 (26%), Positives = 54/106 (50%)
Query: 687 EKLIALLDHTNEKVVEASLAALSTVIDDGVDIEQGVMVLCEAQGIKPILDVLLEKRTENL 746
++L+ LL H + V +L A+ ++ G D++ V++ G+ P L +LL EN+
Sbjct: 302 KRLVELLSHESTLVQTPALRAVGNIVT-GNDLQTQVVINA---GVLPALRLLLSSPKENI 357
Query: 747 QRRAVWVVERILRTDDIAYEVSGDPNVSTALVDAFQHADYRTRQIA 792
++ A W + I + + D N+ LV + A+Y+T++ A
Sbjct: 358 KKEACWTISNITAGNTEQIQAVIDANLIPPLVKLLEVAEYKTKKEA 403
Score = 63 (27.2 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 24/90 (26%), Positives = 39/90 (43%)
Query: 310 VKVLVARTVGSCLINIMKSGN--MQAREAALKALNQISSCEPSAKVLIHAGILPPLVKDL 367
+ V++ V L+ M+ M EAA N S KV++ A +P ++ L
Sbjct: 123 IDVVIQAGVVPRLVEFMRENQPEMLQLEAAWALTNIASGTSAQTKVVVDADAVPLFIQLL 182
Query: 368 FTVGSNHLPMRLKEVSATILANVVNSGHDF 397
+T GS + +KE + L NV D+
Sbjct: 183 YT-GS----VEVKEQAIWALGNVAGDSTDY 207
Score = 61 (26.5 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 23/82 (28%), Positives = 38/82 (46%)
Query: 326 MKSGNMQAREAALKALNQISSCE--PSAKVLIHAGILPPLVKDLFTVGSNHLPMRLKEVS 383
+ S +MQ + +A QI S E P V+I AG++P LV+ + + P L+ +
Sbjct: 96 LNSDDMQEQLSATVKFRQILSREHRPPIDVVIQAGVVPRLVEFM----RENQPEMLQLEA 151
Query: 384 ATILANVVNSGHDFDSITVGPD 405
A L N+ + + V D
Sbjct: 152 AWALTNIASGTSAQTKVVVDAD 173
>TAIR|locus:2103351 [details] [associations]
symbol:ARABIDILLO-2 "AT3G60350" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0048527 "lateral root development" evidence=IGI;IMP]
InterPro:IPR000225 InterPro:IPR001810 InterPro:IPR016024
Pfam:PF00514 PROSITE:PS50176 PROSITE:PS50181 SMART:SM00185
SMART:SM00256 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0048527
HSSP:Q02248 eggNOG:NOG48141 HOGENOM:HOG000029512
ProtClustDB:CLSN2685043 EMBL:AL138646 IPI:IPI00537320 PIR:T47846
RefSeq:NP_191594.1 UniGene:At.48788 UniGene:At.63623
ProteinModelPortal:Q9M224 SMR:Q9M224 PRIDE:Q9M224
EnsemblPlants:AT3G60350.1 GeneID:825206 KEGG:ath:AT3G60350
TAIR:At3g60350 InParanoid:Q9M224 OMA:RTTIDHI PhylomeDB:Q9M224
Genevestigator:Q9M224 Uniprot:Q9M224
Length = 928
Score = 129 (50.5 bits), Expect = 0.00022, P = 0.00022
Identities = 115/511 (22%), Positives = 213/511 (41%)
Query: 154 MIIDMLKSSSRKVRCTALETLRIVVEEDDDNKEI-LGQGDTVRTI--VKFLSHELSRE-R 209
+++ +++S+ V+ A L + DD+N I G+ + V ++ L EL++ R
Sbjct: 384 LLLSLMQSAQEDVQERAATGLATFIVVDDENASIDCGRAEAVMRDGGIRLLL-ELAKSWR 442
Query: 210 E----EAVSLLYELSKSEALCEKIGSINGAILILVGMTSSKSENLLTVEKAEKTLANLEK 265
E EA + LS + + + + G I +L + +KS N L E+A L NL
Sbjct: 443 EGLQSEAAKAIANLSVNAKVAKAVAE-EGGISVLADL--AKSMNRLVAEEAAGGLWNLSV 499
Query: 266 CENNVRQMAENGRLQPLLTQILEGPQ--ETKLSLAA-FLGDLALNSDVKVLVARTVG-SC 321
E + +A+ G + L+ I P + L AA L +LA + + VAR G
Sbjct: 500 GEEHKNAIAQAGGVNALVDLIFRWPHGCDGVLERAAGALANLAADDKCSMEVARAGGVHA 559
Query: 322 LINIMKSGNMQ-AREAALKALNQISSCEPS----AKVLIHAGILPPLVKDLFTVGSNHLP 376
L+ + ++ + A+E A +AL +++ S A V AG L LV+ S H
Sbjct: 560 LVMLARNCKYEGAQEQAARALANLAAHGDSNGNNAAVGQEAGALEALVQ---LTQSPH-- 614
Query: 377 MRLKEVSATILANVVNSGHDFDSITVGPDNQTLVSEDIVHNLLHLISNTGPTIECKLLQX 436
+K+ +A L N+ + +SI + LV+ L SN ++ +
Sbjct: 615 EGVKQEAAGALWNLAFDDKNRESIAAFGGVEALVA------LAKSSSNASTGLQ----ER 664
Query: 437 XXXXXXXXXXXXXXXXAIKSSGATISLVQFVEAPQNDLRLASIELIQNLSPHMGHELADA 496
AI G L+ V + D+ + + NLS + G+ L
Sbjct: 665 VAGALWGLSVSEANSIAIGHEGGIPPLIALVRSEAEDVHETAAGALWNLSFNPGNALRIV 724
Query: 497 LRGAVGQLGSLIRVISENVGISKEQAAAVGLLAELPER--DLGLTRQMLDEGAFGLIFSR 554
G V +L+++ S +V AA+ L R + + L+ + + +
Sbjct: 725 EEGGVV---ALVQLCSSSVSKMARFMAALALAYMFDGRMDEYAMIGTSLESTSKSVTLNG 781
Query: 555 VKSIQLGETRGSRFVTPFLE------GLLSVLARVTFVLSDE---PDAIALCCEHNLAAL 605
+++ L + + F+ F+E G LS + +S+ P+A L C +
Sbjct: 782 ARTMALDQIKA--FIKTFMEHQIFSTGALSSAPSMLAQVSERARIPEAGHLRCSGSEIGR 839
Query: 606 FIELLQSNGLDKVQMVSATALENLSL-ESKN 635
F+ +L++ L ++ +A AL ++ ES++
Sbjct: 840 FVTMLRNPCL-VLRACAAFALLQFTIPESRH 869
>TAIR|locus:2198180 [details] [associations]
symbol:AT1G01670 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC009273 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 HSSP:Q8VZ40
eggNOG:KOG0167 PIR:E86147 EMBL:AK118101 IPI:IPI00528098
RefSeq:NP_171673.2 UniGene:At.42637 ProteinModelPortal:Q8GXQ7
SMR:Q8GXQ7 EnsemblPlants:AT1G01670.1 GeneID:839365
KEGG:ath:AT1G01670 TAIR:At1g01670 InParanoid:Q8GXQ7 OMA:NDNEMEL
PhylomeDB:Q8GXQ7 Genevestigator:Q8GXQ7 Uniprot:Q8GXQ7
Length = 365
Score = 123 (48.4 bits), Expect = 0.00025, P = 0.00025
Identities = 24/75 (32%), Positives = 42/75 (56%)
Query: 26 IEPIYDAFVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRST 85
IEP F+CP++K +M++P +G T+E + +W G K P+T L +
Sbjct: 292 IEPP-QCFICPISKDIMQNPHVAADGYTYEADEFRRWLNH---GGEKS--PMTNLRLENR 345
Query: 86 DLNPSIALRNTIEEW 100
+L P++ LR+ I++W
Sbjct: 346 NLIPNLVLRSAIKDW 360
>UNIPROTKB|F1PFK6 [details] [associations]
symbol:KPNA1 "Importin subunit alpha" species:9615 "Canis
lupus familiaris" [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0006606 "protein import into nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000225 InterPro:IPR002652
InterPro:IPR016024 InterPro:IPR024931 Pfam:PF00514 Pfam:PF01749
PIRSF:PIRSF005673 PROSITE:PS50176 PROSITE:PS51214 SMART:SM00185
GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0008565 GO:GO:0006606 CTD:3836
GeneTree:ENSGT00610000085856 KO:K15042 OMA:ETEPNPP
EMBL:AAEX03017026 EMBL:AAEX03017027 RefSeq:XP_535761.1
ProteinModelPortal:F1PFK6 Ensembl:ENSCAFT00000018942 GeneID:478585
KEGG:cfa:478585 Uniprot:F1PFK6
Length = 538
Score = 131 (51.2 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 33/117 (28%), Positives = 62/117 (52%)
Query: 680 LLEGHAVEKLIALLDHTNEKVVEASLAALSTVIDDGVDIEQGVMVLCEAQGIKPILDVLL 739
+++ +L+ LL H + KVV +L A+ ++ G DI+ V++ C A ++ +L LL
Sbjct: 292 VIDAGVCRRLVELLMHNDYKVVSPALRAVGNIVT-GDDIQTQVILNCSA--LQSLLH-LL 347
Query: 740 EKRTENLQRRAVWVVERILRTDDIAYEVSGDPNVSTALVDAFQHADYRTRQIAERAL 796
E++++ A W + I + + D N+ AL+ Q A++RTR+ A A+
Sbjct: 348 SSPKESIKKEACWTISNITAGNRAQIQTVIDANIFPALISILQTAEFRTRKEAAWAI 404
Score = 40 (19.1 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 17/68 (25%), Positives = 30/68 (44%)
Query: 574 EGLLSVLARVTFVLSDEPDAIA--LCCEHNLAALFIELLQSNGLDKVQMVSATALENLSL 631
E LS + +LS EP+ + + A F+E L+ +Q SA L N++
Sbjct: 97 EQQLSATQKFRKLLSKEPNPPIDEVISTPGVVARFVEFLKRKENCTLQFESAWVLTNIAS 156
Query: 632 ESKNLTKL 639
+ T++
Sbjct: 157 GNSLQTRI 164
>UNIPROTKB|P52294 [details] [associations]
symbol:KPNA1 "Importin subunit alpha-1" species:9606 "Homo
sapiens" [GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0042307 "positive regulation of
protein import into nucleus" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0030425 "dendrite" evidence=ISS] [GO:0000018
"regulation of DNA recombination" evidence=TAS] [GO:0005643
"nuclear pore" evidence=TAS] [GO:0005737 "cytoplasm" evidence=TAS]
[GO:0006607 "NLS-bearing substrate import into nucleus"
evidence=TAS] [GO:0008139 "nuclear localization sequence binding"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0006309 "apoptotic DNA fragmentation"
evidence=TAS] [GO:0006915 "apoptotic process" evidence=TAS]
[GO:0006921 "cellular component disassembly involved in execution
phase of apoptosis" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0019058 "viral infectious cycle" evidence=TAS]
[GO:0019221 "cytokine-mediated signaling pathway" evidence=TAS]
Reactome:REACT_578 InterPro:IPR000225 InterPro:IPR002652
InterPro:IPR016024 InterPro:IPR024931 Pfam:PF00514 Pfam:PF01749
PIRSF:PIRSF005673 PROSITE:PS50176 PROSITE:PS51214 SMART:SM00185
GO:GO:0005829 Pathway_Interaction_DB:pi3kciaktpathway
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0019048
GO:GO:0005654 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0008565 EMBL:CH471052 GO:GO:0005643 GO:GO:0019221
eggNOG:COG5064 GO:GO:0019058 GO:GO:0006309 GO:GO:0008139
GO:GO:0000018 GO:GO:0006607 HOGENOM:HOG000167616 CTD:3836
HOVERGEN:HBG001846 KO:K15042 OMA:ETEPNPP OrthoDB:EOG4QNMVZ
EMBL:S75295 EMBL:BT006959 EMBL:CR456743 EMBL:AC083798 EMBL:AC096861
EMBL:BC002374 EMBL:BC003009 IPI:IPI00303292 PIR:I59931
RefSeq:NP_002255.3 UniGene:Hs.161008 PDB:2JDQ PDB:3TJ3 PDBsum:2JDQ
PDBsum:3TJ3 ProteinModelPortal:P52294 SMR:P52294 DIP:DIP-29296N
IntAct:P52294 MINT:MINT-240027 STRING:P52294 PhosphoSite:P52294
DMDM:296439328 PaxDb:P52294 PRIDE:P52294 DNASU:3836
Ensembl:ENST00000344337 GeneID:3836 KEGG:hsa:3836 UCSC:uc003efb.1
GeneCards:GC03M122140 HGNC:HGNC:6394 MIM:600686 neXtProt:NX_P52294
PharmGKB:PA30185 InParanoid:P52294 PhylomeDB:P52294
EvolutionaryTrace:P52294 GenomeRNAi:3836 NextBio:15079
PMAP-CutDB:P52294 ArrayExpress:P52294 Bgee:P52294 CleanEx:HS_KPNA1
Genevestigator:P52294 GermOnline:ENSG00000114030 Uniprot:P52294
Length = 538
Score = 131 (51.2 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 33/117 (28%), Positives = 62/117 (52%)
Query: 680 LLEGHAVEKLIALLDHTNEKVVEASLAALSTVIDDGVDIEQGVMVLCEAQGIKPILDVLL 739
+++ +L+ LL H + KVV +L A+ ++ G DI+ V++ C A ++ +L LL
Sbjct: 292 VIDAGVCRRLVELLMHNDYKVVSPALRAVGNIVT-GDDIQTQVILNCSA--LQSLLH-LL 347
Query: 740 EKRTENLQRRAVWVVERILRTDDIAYEVSGDPNVSTALVDAFQHADYRTRQIAERAL 796
E++++ A W + I + + D N+ AL+ Q A++RTR+ A A+
Sbjct: 348 SSPKESIKKEACWTISNITAGNRAQIQTVIDANIFPALISILQTAEFRTRKEAAWAI 404
Score = 40 (19.1 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 17/68 (25%), Positives = 30/68 (44%)
Query: 574 EGLLSVLARVTFVLSDEPDAIA--LCCEHNLAALFIELLQSNGLDKVQMVSATALENLSL 631
E LS + +LS EP+ + + A F+E L+ +Q SA L N++
Sbjct: 97 EQQLSATQKFRKLLSKEPNPPIDEVISTPGVVARFVEFLKRKENCTLQFESAWVLTNIAS 156
Query: 632 ESKNLTKL 639
+ T++
Sbjct: 157 GNSLQTRI 164
>UNIPROTKB|Q5R909 [details] [associations]
symbol:KPNA1 "Importin subunit alpha-1" species:9601 "Pongo
abelii" [GO:0005634 "nucleus" evidence=ISS] [GO:0030425 "dendrite"
evidence=ISS] [GO:0042307 "positive regulation of protein import
into nucleus" evidence=ISS] InterPro:IPR000225 InterPro:IPR002652
InterPro:IPR016024 InterPro:IPR024931 Pfam:PF00514 Pfam:PF01749
PIRSF:PIRSF005673 PROSITE:PS50176 PROSITE:PS51214 SMART:SM00185
GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0008565 GO:GO:0006606 CTD:3836
GeneTree:ENSGT00610000085856 HOVERGEN:HBG001846 KO:K15042
OMA:ETEPNPP OrthoDB:EOG4QNMVZ HSSP:Q02821 EMBL:CR859588
RefSeq:NP_001126018.1 UniGene:Pab.5885 ProteinModelPortal:Q5R909
SMR:Q5R909 PRIDE:Q5R909 Ensembl:ENSPPYT00000015684 GeneID:100172964
KEGG:pon:100172964 InParanoid:Q5R909 Uniprot:Q5R909
Length = 538
Score = 131 (51.2 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 33/117 (28%), Positives = 62/117 (52%)
Query: 680 LLEGHAVEKLIALLDHTNEKVVEASLAALSTVIDDGVDIEQGVMVLCEAQGIKPILDVLL 739
+++ +L+ LL H + KVV +L A+ ++ G DI+ V++ C A ++ +L LL
Sbjct: 292 VIDAGVCRRLVELLMHNDYKVVSPALRAVGNIVT-GDDIQTQVILNCSA--LQSLLH-LL 347
Query: 740 EKRTENLQRRAVWVVERILRTDDIAYEVSGDPNVSTALVDAFQHADYRTRQIAERAL 796
E++++ A W + I + + D N+ AL+ Q A++RTR+ A A+
Sbjct: 348 SSPKESIKKEACWTISNITAGNRAQIQTVIDANIFPALISILQTAEFRTRKEAAWAI 404
Score = 40 (19.1 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 17/68 (25%), Positives = 30/68 (44%)
Query: 574 EGLLSVLARVTFVLSDEPDAIA--LCCEHNLAALFIELLQSNGLDKVQMVSATALENLSL 631
E LS + +LS EP+ + + A F+E L+ +Q SA L N++
Sbjct: 97 EQQLSATQKFRKLLSKEPNPPIDEVISTPGVVARFVEFLKRKENCTLQFESAWVLTNIAS 156
Query: 632 ESKNLTKL 639
+ T++
Sbjct: 157 GNSLQTRI 164
>TAIR|locus:2055033 [details] [associations]
symbol:ARABIDILLO-1 "AT2G44900" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0048527
"lateral root development" evidence=IGI;IMP] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR000225 InterPro:IPR001810
InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176 PROSITE:PS50181
SMART:SM00185 SMART:SM00256 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0048527 EMBL:AC002388 IPI:IPI00521082
PIR:T00403 RefSeq:NP_566029.1 UniGene:At.53128 HSSP:Q02248
ProteinModelPortal:O22161 SMR:O22161 PaxDb:O22161 PRIDE:O22161
EnsemblPlants:AT2G44900.1 GeneID:819099 KEGG:ath:AT2G44900
TAIR:At2g44900 eggNOG:NOG48141 HOGENOM:HOG000029512
InParanoid:O22161 OMA:MDDESAN PhylomeDB:O22161
ProtClustDB:CLSN2685043 Genevestigator:O22161 Uniprot:O22161
Length = 930
Score = 127 (49.8 bits), Expect = 0.00035, P = 0.00035
Identities = 93/391 (23%), Positives = 163/391 (41%)
Query: 154 MIIDMLKSSSRKVRCTALETLRIVVEEDDDNKEI-LGQGDTVRTI--VKFLSHELSRE-R 209
+++++++SS V+ + L V DD+N I G+ + V ++ L EL++ R
Sbjct: 393 LLLNLMQSSQEDVQERSATGLATFVVVDDENASIDCGRAEAVMKDGGIRLLL-ELAKSWR 451
Query: 210 E----EAVSLLYELSKSEALCEKIGSINGAILILVGMTSSKSENLLTVEKAEKTLANLEK 265
E EA + LS + + + + G I IL G+ +KS N L E+A L NL
Sbjct: 452 EGLQSEAAKAIANLSVNANIAKSVAE-EGGIKILAGL--AKSMNRLVAEEAAGGLWNLSV 508
Query: 266 CENNVRQMAENGRLQPLLTQILEGPQ--ETKLSLAA-FLGDLALNSDVKVLVARTVG-SC 321
E + +A+ G ++ L+ I P + L AA L +LA + + VA+ G
Sbjct: 509 GEEHKNAIAQAGGVKALVDLIFRWPNGCDGVLERAAGALANLAADDKCSMEVAKAGGVHA 568
Query: 322 LINIMKSGNMQA-REAALKALNQIS----SCEPSAKVLIHAGILPPLVKDLFTVGSNHLP 376
L+ + ++ + +E A +AL ++ S +A V AG L LV+ S H
Sbjct: 569 LVMLARNCKYEGVQEQAARALANLAAHGDSNNNNAAVGQEAGALEALVQ---LTKSPHEG 625
Query: 377 MRLKEVSATILANVVNSGHDFDSITVGPDNQTLVSEDIVHNLLHLISNTGPTIECKLLQX 436
+R + A L N+ + +SI+V + LV+ L SN ++ +
Sbjct: 626 VRQEAAGA--LWNLSFDDKNRESISVAGGVEALVA------LAQSCSNASTGLQ----ER 673
Query: 437 XXXXXXXXXXXXXXXXAIKSSGATISLVQFVEAPQNDLRLASIELIQNLSPHMGHELADA 496
AI G L+ + D+ + + NL+ + G+ L
Sbjct: 674 AAGALWGLSVSEANSVAIGREGGVPPLIALARSEAEDVHETAAGALWNLAFNPGNALRIV 733
Query: 497 LRGAVGQLGSLIRVISENVGISKEQAAAVGL 527
G V +L+ + S +V AA+ L
Sbjct: 734 EEGGVP---ALVHLCSSSVSKMARFMAALAL 761
>UNIPROTKB|A2VE08 [details] [associations]
symbol:KPNA1 "Importin subunit alpha-1" species:9913 "Bos
taurus" [GO:0030425 "dendrite" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0042307 "positive regulation of protein import
into nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0006606 "protein import into nucleus" evidence=IEA]
InterPro:IPR000225 InterPro:IPR002652 InterPro:IPR016024
InterPro:IPR024931 Pfam:PF00514 Pfam:PF01749 PIRSF:PIRSF005673
PROSITE:PS50176 PROSITE:PS51214 SMART:SM00185 GO:GO:0005634
GO:GO:0005737 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0008565 eggNOG:COG5064 GO:GO:0006606 HOGENOM:HOG000167616
EMBL:BC133509 IPI:IPI00714269 RefSeq:NP_001075202.1
UniGene:Bt.13491 ProteinModelPortal:A2VE08 SMR:A2VE08 STRING:A2VE08
PRIDE:A2VE08 Ensembl:ENSBTAT00000014799 GeneID:539679
KEGG:bta:539679 CTD:3836 GeneTree:ENSGT00610000085856
HOVERGEN:HBG001846 InParanoid:A2VE08 KO:K15042 OMA:ETEPNPP
OrthoDB:EOG4QNMVZ NextBio:20878149 ArrayExpress:A2VE08
Uniprot:A2VE08
Length = 538
Score = 130 (50.8 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 32/117 (27%), Positives = 62/117 (52%)
Query: 680 LLEGHAVEKLIALLDHTNEKVVEASLAALSTVIDDGVDIEQGVMVLCEAQGIKPILDVLL 739
+++ +L+ LL H + KVV +L A+ ++ G D++ V++ C A ++ +L LL
Sbjct: 292 VIDAGVCRRLVELLMHNDYKVVSPALRAVGNIVT-GDDVQTQVILNCSA--LQSLLH-LL 347
Query: 740 EKRTENLQRRAVWVVERILRTDDIAYEVSGDPNVSTALVDAFQHADYRTRQIAERAL 796
E++++ A W + I + + D N+ AL+ Q A++RTR+ A A+
Sbjct: 348 SSPKESIKKEACWTISNITAGNRAQIQTVIDANIFPALISILQTAEFRTRKEAAWAI 404
Score = 40 (19.1 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 17/68 (25%), Positives = 30/68 (44%)
Query: 574 EGLLSVLARVTFVLSDEPDAIA--LCCEHNLAALFIELLQSNGLDKVQMVSATALENLSL 631
E LS + +LS EP+ + + A F+E L+ +Q SA L N++
Sbjct: 97 EQQLSATQKFRKLLSKEPNPPIDEVISTPGVVARFVEFLKRKENCTLQFESAWVLTNIAS 156
Query: 632 ESKNLTKL 639
+ T++
Sbjct: 157 GNSLQTRI 164
>ZFIN|ZDB-GENE-081030-14 [details] [associations]
symbol:trim35-37 "tripartite motif containing 35-37"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 ZFIN:ZDB-GENE-081030-14
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00680000099496 EMBL:CU137686 IPI:IPI00512555
Ensembl:ENSDART00000140241 Uniprot:E9QHI9
Length = 409
Score = 121 (47.7 bits), Expect = 0.00050, P = 0.00050
Identities = 59/238 (24%), Positives = 116/238 (48%)
Query: 30 YDAFVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTDLNP 89
YD ++CP+ +++ + PV L +F +E ++++++ +N ++ CP+ ++ RS+ P
Sbjct: 7 YD-YICPVCQEIFKTPVLLSCSHSFCKECLQQFWRN--KNTQE--CPVCRR--RSSKSAP 59
Query: 90 --SIALRNTIEEW-NARNEAAQLDMARKSLNLGSSESDIMPALKYVQYFCQSSR-SNKHV 145
++ L+N E + RNE+ + + +L S + + L+ Q C R S KH+
Sbjct: 60 PVNLGLKNVCESFLKERNESRSSG-SEEICSLHSEKLKLF-CLEDKQPVCLVCRDSEKHL 117
Query: 146 VHN----SELIPMIIDMLKSSSRKV--RCTALETLRIVVEEDDDNKEILGQGD-TVRTIV 198
H SE+ P + L ++ + + +C E ++ E+ + I Q + T R I
Sbjct: 118 KHTFRPVSEVAPAKKEELNTALKSLQEKCKLNEEMKREFEKTAQH--IKAQAEHTERHIK 175
Query: 199 KFLS--HELSREREEA-VSLLYELS--KSEALCEKIGSINGAILILVGMTSSKSENLL 251
+ H+ R+ EEA ++ L E K + + EK+ +N I L T +E +L
Sbjct: 176 QQFEKLHQFLRDEEEATITALREEEEQKKQMMKEKLEEMNTHISAL-SHTIKDTEEML 232
>TAIR|locus:2174814 [details] [associations]
symbol:CMPG2 ""CYS, MET, PRO, and GLY protein 2""
species:3702 "Arabidopsis thaliana" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
[GO:0050832 "defense response to fungus" evidence=RCA]
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB010076
HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT023419 EMBL:BT025629
IPI:IPI00540273 RefSeq:NP_201271.1 UniGene:At.19743
UniGene:At.74061 ProteinModelPortal:Q9FLF4 SMR:Q9FLF4 STRING:Q9FLF4
PaxDb:Q9FLF4 PRIDE:Q9FLF4 EnsemblPlants:AT5G64660.1 GeneID:836587
KEGG:ath:AT5G64660 TAIR:At5g64660 eggNOG:NOG315056
InParanoid:Q9FLF4 OMA:CAGLLEF PhylomeDB:Q9FLF4
ProtClustDB:CLSN2684525 Genevestigator:Q9FLF4 Uniprot:Q9FLF4
Length = 420
Score = 121 (47.7 bits), Expect = 0.00052, P = 0.00052
Identities = 70/315 (22%), Positives = 136/315 (43%)
Query: 33 FVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCPLTQKELRSTDLNPSIA 92
F CP++ VM+ PV+L G T++R +I++W +G CP T + L++ D P+
Sbjct: 14 FRCPISLDVMKSPVSLCTGVTYDRASIQRWL-----DGGNNTCPATMQILQNKDFIPNRT 68
Query: 93 LRNTIEEWN--ARN----EAAQLDMARKS--------LNLGSSESDIMPALKYVQYFCQS 138
L+ IE W+ R E+A+L + + + E D L + F +
Sbjct: 69 LQRLIEIWSDSVRRRTCVESAELAAPTRDEIADAIDRVKIEKEERDDREVLSKIVRFGRE 128
Query: 139 SRSNK-HVVHNSELIPMIIDMLKSSSRKVRCTALETLRIVVEEDDDNKEILGQGDTVRTI 197
S N+ + + + +++D++ + A +VV+E +IL T+R+
Sbjct: 129 SDDNRGFLAGKDDFVKLLVDLINQVDFETTSAAKS---LVVQEA---VKILS---TIRSK 179
Query: 198 V----KFLSHELSREREEAVSLLYELSKSEALCEKIGSINGAILILVGMTSSKSENLLTV 253
V +F + L+ R+ ++Y L K+ + KI L+ + +E+ L +
Sbjct: 180 VSDRRRFSNLILTNGRDRLSVIVY-LFKTGNVELKIDCAG-----LLEFIAVDAESKLLI 233
Query: 254 EKAEKTLANLEKC--ENNVRQMAENGRLQPLLTQILEGPQETKLSLAA--FLGDLA--LN 307
+ + + L K +++ + E+ L L+ + P+ KL+L +GD+ L+
Sbjct: 234 AERDGLITELMKSISKDSDLSLIESS-LSCLIA--ISSPKRVKLNLLREKLIGDVTKLLS 290
Query: 308 SDVKVLVARTVGSCL 322
L CL
Sbjct: 291 DSTSSLSVSVTEKCL 305
>TAIR|locus:2050669 [details] [associations]
symbol:AT2G45910 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR006016
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 Pfam:PF00582 Pfam:PF04564 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504 UniPathway:UPA00143
GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006950
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.60.120.200
InterPro:IPR013320 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151
EMBL:AC004665 HSSP:Q8VZ40 HOGENOM:HOG000237993 EMBL:BT002512
EMBL:AK227123 IPI:IPI00542046 PIR:T02456 RefSeq:NP_182115.2
UniGene:At.36571 ProteinModelPortal:Q8GUH1 SMR:Q8GUH1 PRIDE:Q8GUH1
EnsemblPlants:AT2G45910.1 GeneID:819199 KEGG:ath:AT2G45910
GeneFarm:1984 TAIR:At2g45910 InParanoid:Q8GUH1 OMA:KGTFAYM
PhylomeDB:Q8GUH1 ProtClustDB:CLSN2680270 Genevestigator:Q8GUH1
Uniprot:Q8GUH1
Length = 834
Score = 124 (48.7 bits), Expect = 0.00065, P = 0.00065
Identities = 31/84 (36%), Positives = 45/84 (53%)
Query: 19 YHFERL-H-IEPIYDAFVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRENGRKPVCP 76
+H R H I P Y F+CP+ ++VM+DP +G T+E EAI W + P
Sbjct: 753 FHLGRNEHRIAPPY--FICPIFQEVMQDPHVAADGFTYEAEAIRAWL-----DSEHDTSP 805
Query: 77 LTQKELRSTDLNPSIALRNTIEEW 100
+T +L T L + ALR+ I+EW
Sbjct: 806 MTNVKLSHTSLIANHALRSAIQEW 829
>RGD|735064 [details] [associations]
symbol:Kpna1 "karyopherin alpha 1" species:10116 "Rattus
norvegicus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006606 "protein import into nucleus" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0030425 "dendrite"
evidence=IDA] [GO:0042307 "positive regulation of protein import
into nucleus" evidence=IMP] InterPro:IPR000225 InterPro:IPR002652
InterPro:IPR016024 InterPro:IPR024931 Pfam:PF00514 Pfam:PF01749
PIRSF:PIRSF005673 PROSITE:PS50176 PROSITE:PS51214 SMART:SM00185
RGD:735064 GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008565 eggNOG:COG5064
GO:GO:0006606 HOGENOM:HOG000167616 HOVERGEN:HBG001846
OrthoDB:EOG4QNMVZ EMBL:AY351984 IPI:IPI00395277 UniGene:Rn.6272
ProteinModelPortal:P83953 SMR:P83953 DIP:DIP-46060N STRING:P83953
PRIDE:P83953 UCSC:RGD:735064 InParanoid:P83953 ArrayExpress:P83953
Genevestigator:P83953 GermOnline:ENSRNOG00000000399 Uniprot:P83953
Length = 538
Score = 129 (50.5 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 33/117 (28%), Positives = 62/117 (52%)
Query: 680 LLEGHAVEKLIALLDHTNEKVVEASLAALSTVIDDGVDIEQGVMVLCEAQGIKPILDVLL 739
+++ +L+ LL H + KVV +L A+ ++ G DI+ V++ C A ++ +L LL
Sbjct: 292 VIDAGVCRRLVELLMHNDYKVVSPALRAVGNIVT-GDDIQTQVILNCSA--LQSLLH-LL 347
Query: 740 EKRTENLQRRAVWVVERILRTDDIAYEVSGDPNVSTALVDAFQHADYRTRQIAERAL 796
E++++ A W + I + + D N+ AL+ Q A++RTR+ A A+
Sbjct: 348 SSPKESIKKEACWTISNITAGNRAQIQTVIDANMFPALISILQTAEFRTRKEAAWAI 404
Score = 38 (18.4 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 17/68 (25%), Positives = 30/68 (44%)
Query: 574 EGLLSVLARVTFVLSDEPDAIA--LCCEHNLAALFIELLQSNGLDKVQMVSATALENLSL 631
E LS + +LS EP+ + + A F+E L+ +Q SA L N++
Sbjct: 97 EQQLSATQKFRKLLSKEPNPPIDEVINTPGVVARFVEFLKRKENCTLQFESAWVLTNIAS 156
Query: 632 ESKNLTKL 639
+ T++
Sbjct: 157 GNSLQTRI 164
>UNIPROTKB|Q56R20 [details] [associations]
symbol:Kpna1 "Importin subunit alpha" species:10116 "Rattus
norvegicus" [GO:0006606 "protein import into nucleus" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
InterPro:IPR000225 InterPro:IPR002652 InterPro:IPR016024
InterPro:IPR024931 Pfam:PF00514 Pfam:PF01749 PIRSF:PIRSF005673
PROSITE:PS50176 PROSITE:PS51214 SMART:SM00185 RGD:735064
GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0008565 GO:GO:0006606 CTD:3836
GeneTree:ENSGT00610000085856 HOVERGEN:HBG001846 KO:K15042
OMA:ETEPNPP UniGene:Rn.6272 EMBL:CH473967 EMBL:AY779025
IPI:IPI00851105 RefSeq:NP_942021.2 SMR:Q56R20 STRING:Q56R20
Ensembl:ENSRNOT00000035611 GeneID:288064 KEGG:rno:288064
InParanoid:Q56R20 NextBio:627513 Genevestigator:Q56R20
Uniprot:Q56R20
Length = 538
Score = 129 (50.5 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 33/117 (28%), Positives = 62/117 (52%)
Query: 680 LLEGHAVEKLIALLDHTNEKVVEASLAALSTVIDDGVDIEQGVMVLCEAQGIKPILDVLL 739
+++ +L+ LL H + KVV +L A+ ++ G DI+ V++ C A ++ +L LL
Sbjct: 292 VIDAGVCRRLVELLMHNDYKVVSPALRAVGNIVT-GDDIQTQVILNCSA--LQSLLH-LL 347
Query: 740 EKRTENLQRRAVWVVERILRTDDIAYEVSGDPNVSTALVDAFQHADYRTRQIAERAL 796
E++++ A W + I + + D N+ AL+ Q A++RTR+ A A+
Sbjct: 348 SSPKESIKKEACWTISNITAGNRAQIQTVIDANMFPALISILQTAEFRTRKEAAWAI 404
Score = 38 (18.4 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 17/68 (25%), Positives = 30/68 (44%)
Query: 574 EGLLSVLARVTFVLSDEPDAIA--LCCEHNLAALFIELLQSNGLDKVQMVSATALENLSL 631
E LS + +LS EP+ + + A F+E L+ +Q SA L N++
Sbjct: 97 EQQLSATQKFRKLLSKEPNPPIDEVINTPGVVARFVEFLKRKENCTLQFESAWVLTNIAS 156
Query: 632 ESKNLTKL 639
+ T++
Sbjct: 157 GNSLQTRI 164
>POMBASE|SPCC962.03c [details] [associations]
symbol:cut15 "karyopherin Cut15" species:4896
"Schizosaccharomyces pombe" [GO:0000087 "M phase of mitotic cell
cycle" evidence=IMP] [GO:0005525 "GTP binding" evidence=NAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005643 "nuclear pore" evidence=NAS] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006606 "protein import into nucleus"
evidence=IDA;IMP] [GO:0006607 "NLS-bearing substrate import into
nucleus" evidence=TAS] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IMP] [GO:0008565 "protein transporter activity"
evidence=ISO] [GO:0030261 "chromosome condensation" evidence=IMP]
[GO:0030674 "protein binding, bridging" evidence=IPI] [GO:0033554
"cellular response to stress" evidence=IGI] InterPro:IPR000225
InterPro:IPR002652 InterPro:IPR016024 InterPro:IPR024931
Pfam:PF00514 Pfam:PF01749 PIRSF:PIRSF005673 PROSITE:PS50176
PROSITE:PS51214 SMART:SM00185 PomBase:SPCC962.03c GO:GO:0005525
GO:GO:0007346 GO:GO:0005737 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0033554 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0008565 GO:GO:0005643 GO:GO:0030261
GO:GO:0006607 GO:GO:0000087 HOGENOM:HOG000167616 EMBL:AB010574
EMBL:AB027972 PIR:T41650 RefSeq:NP_587868.1
ProteinModelPortal:O14063 SMR:O14063 STRING:O14063
EnsemblFungi:SPCC962.03c.1 GeneID:2539426 KEGG:spo:SPCC962.03c
OMA:WRSERIV OrthoDB:EOG408RH7 NextBio:20800590 Uniprot:O14063
Length = 542
Score = 121 (47.7 bits), Expect = 0.00077, P = 0.00077
Identities = 72/383 (18%), Positives = 157/383 (40%)
Query: 108 QLDMARKSLNLGSSESDIMPALKYVQYFCQSSRSNKHVVHNSELIPMIIDMLKSSSRKVR 167
QL K+L E+ I K+ + + + V ++ ++P ++ L + ++
Sbjct: 79 QLPDLLKALYSDDIEAQIQATAKFRKALSKETNPPIQKVIDAGVVPRFVEFLSHENNLLK 138
Query: 168 CTALETLRIVVEEDDDNKEILGQGDTVRTIVKFLSHELSREREEAVSLLYELSKSEALCE 227
A L V + ++ + + V V LS RE+AV L ++ +C
Sbjct: 139 FEASWALTNVASGSSNQTHVVVEANAVPVFVSLLSSSEQDVREQAVWALGNIAGDSPMCR 198
Query: 228 KIGSINGAILILVGMTSSKSENLLTVEKAEKTLANLEKCENNVRQMAENGRLQPLLTQIL 287
G + L+ + S + L + + TL+N+ + +N ++ P+L++++
Sbjct: 199 DHVLQCGVLEPLLNIIES-NRRLSMLRNSTWTLSNMCRGKNPQPDWNSISQVIPVLSKLI 257
Query: 288 EGPQETKLSLA----AFLGDLALNSDVKVLVARTVGSCLINIMKSGNMQAREAALKAL-N 342
E L A ++L D A N ++ ++ + L+ ++ + Q + AL+++ N
Sbjct: 258 YTLDEDVLVDALWAISYLSDGA-NEKIQAIIDAGIPRRLVELLMHPSAQVQTPALRSVGN 316
Query: 343 QISSCEPSAKVLIHAGILPPLVKDLFTVGSNHLPMRLKEVSATILANVVNSGHDFDSITV 402
++ + +V+I+ G L L L + S +R KE TI +N+ +G+ I
Sbjct: 317 IVTGDDVQTQVIINCGALSAL---LSLLSSPRDGVR-KEACWTI-SNIT-AGNS-SQI-- 367
Query: 403 GPDNQTLVSEDIVHNLLHLISNTGPTIECKLLQXXXXXXXXXXXXXXXXXAIKSSGATIS 462
Q ++ +I+ L+HL++ I+ + + GA
Sbjct: 368 ----QYVIEANIIPPLIHLLTTADFKIQKEACWAISNATSGGARRPDQIRYLVEQGAIKP 423
Query: 463 LVQFVEAPQNDLRLASIELIQNL 485
L + N + +++ I+N+
Sbjct: 424 LCNLLACQDNKIIQVALDGIENI 446
>MGI|MGI:1915751 [details] [associations]
symbol:Nsmce2 "non-SMC element 2 homolog (MMS21, S.
cerevisiae)" species:10090 "Mus musculus" [GO:0000722 "telomere
maintenance via recombination" evidence=ISO] [GO:0000724
"double-strand break repair via homologous recombination"
evidence=ISO] [GO:0000781 "chromosome, telomeric region"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0005694
"chromosome" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0016605 "PML body" evidence=ISO]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0019789 "SUMO
ligase activity" evidence=ISO] [GO:0030915 "Smc5-Smc6 complex"
evidence=ISO] [GO:0034184 "positive regulation of maintenance of
mitotic sister chromatid cohesion" evidence=ISO] [GO:0045842
"positive regulation of mitotic metaphase/anaphase transition"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0090398 "cellular
senescence" evidence=ISO] InterPro:IPR004181 InterPro:IPR026846
PROSITE:PS51044 UniPathway:UPA00886 MGI:MGI:1915751 GO:GO:0051301
GO:GO:0007067 GO:GO:0046872 GO:GO:0016605 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000724 GO:GO:0000781
GO:GO:0000722 GO:GO:0090398 GO:GO:0016925 GO:GO:0045842
GO:GO:0019789 GO:GO:0030915 GO:GO:0034184 eggNOG:NOG119258
PANTHER:PTHR21330 CTD:286053 HOGENOM:HOG000063700
HOVERGEN:HBG082059 OrthoDB:EOG4SXNDC OMA:KNFQSCI EMBL:AK003685
EMBL:AK051277 EMBL:BC009125 IPI:IPI00133614 IPI:IPI00817006
RefSeq:NP_001158076.1 RefSeq:NP_081022.2 UniGene:Mm.27762
ProteinModelPortal:Q91VT1 SMR:Q91VT1 IntAct:Q91VT1 STRING:Q91VT1
PhosphoSite:Q91VT1 PRIDE:Q91VT1 DNASU:68501
Ensembl:ENSMUST00000079703 Ensembl:ENSMUST00000168722 GeneID:68501
KEGG:mmu:68501 UCSC:uc007vxu.2 UCSC:uc007vxv.2
GeneTree:ENSGT00390000013961 InParanoid:Q91VT1 NextBio:327310
Bgee:Q91VT1 CleanEx:MM_NSMCE2 Genevestigator:Q91VT1 Uniprot:Q91VT1
Length = 247
Score = 115 (45.5 bits), Expect = 0.00082, P = 0.00082
Identities = 26/77 (33%), Positives = 42/77 (54%)
Query: 33 FVCPLTKQVMRDPVTLEN-GQTFEREAIEKWFKECRENGRKPVCP---LTQKELRSTDLN 88
F+CP+T+ M+ PV + G T+E EAI + + + +K CP + ++R +DL
Sbjct: 167 FICPITQLEMKKPVKNKMCGHTYEEEAIVRMIESKHKRKKKACCPKIGCSHTDMRMSDLI 226
Query: 89 PSIALRNTIEEWNARNE 105
P ALR IE N + +
Sbjct: 227 PDEALRRAIESHNKKKK 243
>RGD|1305156 [details] [associations]
symbol:Nsmce2 "non-SMC element 2, MMS21 homolog (S. cerevisiae)"
species:10116 "Rattus norvegicus" [GO:0000722 "telomere maintenance
via recombination" evidence=ISO;ISS] [GO:0000724 "double-strand
break repair via homologous recombination" evidence=IEA;ISO;ISS]
[GO:0000781 "chromosome, telomeric region" evidence=ISO;ISS]
[GO:0007067 "mitosis" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016605 "PML body" evidence=ISO;ISS] [GO:0016925
"protein sumoylation" evidence=IEA] [GO:0019789 "SUMO ligase
activity" evidence=IEA;ISO;ISS] [GO:0030915 "Smc5-Smc6 complex"
evidence=IEA;ISO;ISS] [GO:0034184 "positive regulation of
maintenance of mitotic sister chromatid cohesion"
evidence=IEA;ISO;ISS] [GO:0045842 "positive regulation of mitotic
metaphase/anaphase transition" evidence=IEA;ISO;ISS] [GO:0051301
"cell division" evidence=IEA] [GO:0090398 "cellular senescence"
evidence=ISO;ISS] [GO:0006303 "double-strand break repair via
nonhomologous end joining" evidence=ISO] InterPro:IPR004181
InterPro:IPR026846 PROSITE:PS51044 UniPathway:UPA00886 RGD:1305156
GO:GO:0051301 GO:GO:0007067 GO:GO:0046872 GO:GO:0016605
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000724
GO:GO:0000781 GO:GO:0000722 GO:GO:0090398 GO:GO:0016925
GO:GO:0045842 GO:GO:0019789 GO:GO:0030915 GO:GO:0034184
eggNOG:NOG119258 PANTHER:PTHR21330 CTD:286053 HOGENOM:HOG000063700
HOVERGEN:HBG082059 OrthoDB:EOG4SXNDC OMA:KNFQSCI
GeneTree:ENSGT00390000013961 EMBL:BC097477 IPI:IPI00203855
RefSeq:NP_001020047.1 UniGene:Rn.203454 ProteinModelPortal:Q4V8A0
SMR:Q4V8A0 STRING:Q4V8A0 Ensembl:ENSRNOT00000005376 GeneID:299957
KEGG:rno:299957 UCSC:RGD:1305156 InParanoid:Q4V8A0 NextBio:646039
ArrayExpress:Q4V8A0 Genevestigator:Q4V8A0 Uniprot:Q4V8A0
Length = 247
Score = 115 (45.5 bits), Expect = 0.00082, P = 0.00082
Identities = 26/77 (33%), Positives = 42/77 (54%)
Query: 33 FVCPLTKQVMRDPVTLEN-GQTFEREAIEKWFKECRENGRKPVCP---LTQKELRSTDLN 88
F+CP+T+ M+ PV + G T+E EAI + + + +K CP + ++R +DL
Sbjct: 167 FICPITQLEMKKPVKNKMCGHTYEEEAIVRMIESKHKRKKKACCPKIGCSHTDMRMSDLI 226
Query: 89 PSIALRNTIEEWNARNE 105
P ALR IE N + +
Sbjct: 227 PDEALRRAIESHNKKKK 243
>UNIPROTKB|Q4V8A0 [details] [associations]
symbol:Nsmce2 "E3 SUMO-protein ligase NSE2" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR004181 InterPro:IPR026846 PROSITE:PS51044
UniPathway:UPA00886 RGD:1305156 GO:GO:0051301 GO:GO:0007067
GO:GO:0046872 GO:GO:0016605 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0000724 GO:GO:0000781 GO:GO:0000722
GO:GO:0090398 GO:GO:0016925 GO:GO:0045842 GO:GO:0019789
GO:GO:0030915 GO:GO:0034184 eggNOG:NOG119258 PANTHER:PTHR21330
CTD:286053 HOGENOM:HOG000063700 HOVERGEN:HBG082059
OrthoDB:EOG4SXNDC OMA:KNFQSCI GeneTree:ENSGT00390000013961
EMBL:BC097477 IPI:IPI00203855 RefSeq:NP_001020047.1
UniGene:Rn.203454 ProteinModelPortal:Q4V8A0 SMR:Q4V8A0
STRING:Q4V8A0 Ensembl:ENSRNOT00000005376 GeneID:299957
KEGG:rno:299957 UCSC:RGD:1305156 InParanoid:Q4V8A0 NextBio:646039
ArrayExpress:Q4V8A0 Genevestigator:Q4V8A0 Uniprot:Q4V8A0
Length = 247
Score = 115 (45.5 bits), Expect = 0.00082, P = 0.00082
Identities = 26/77 (33%), Positives = 42/77 (54%)
Query: 33 FVCPLTKQVMRDPVTLEN-GQTFEREAIEKWFKECRENGRKPVCP---LTQKELRSTDLN 88
F+CP+T+ M+ PV + G T+E EAI + + + +K CP + ++R +DL
Sbjct: 167 FICPITQLEMKKPVKNKMCGHTYEEEAIVRMIESKHKRKKKACCPKIGCSHTDMRMSDLI 226
Query: 89 PSIALRNTIEEWNARNE 105
P ALR IE N + +
Sbjct: 227 PDEALRRAIESHNKKKK 243
>DICTYBASE|DDB_G0272318 [details] [associations]
symbol:DDB_G0272318 "putative importin subunit alpha
B" species:44689 "Dictyostelium discoideum" [GO:0008565 "protein
transporter activity" evidence=IEA] [GO:0006606 "protein import
into nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR000225 InterPro:IPR002652
InterPro:IPR016024 InterPro:IPR024931 Pfam:PF00514 Pfam:PF01749
PIRSF:PIRSF005673 PROSITE:PS50176 PROSITE:PS51214 SMART:SM00185
dictyBase:DDB_G0272318 GO:GO:0005737 GO:GO:0005635 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008565 eggNOG:COG5064
GO:GO:0006606 EMBL:AAFI02000008 HSSP:Q02821 OMA:HNDNKVA
RefSeq:XP_645137.1 ProteinModelPortal:Q76P29 SMR:Q76P29
STRING:Q76P29 EnsemblProtists:DDB0302555 GeneID:8618307
KEGG:ddi:DDB_G0272318 ProtClustDB:CLSZ2846903 Uniprot:Q76P29
Length = 516
Score = 88 (36.0 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 45/211 (21%), Positives = 82/211 (38%)
Query: 596 LCCEHNLAALFIELLQSNGLDKVQMVSATALENLSLESKNLTKLPELPPSGFCASIFPCF 655
L HN + LLQ+ KV MV N + N + PP + P
Sbjct: 190 LVLSHNALPPLLSLLQNPAAIKVSMV-----RNATWTLSNFCRGKPQPPFEIVRASLPVL 244
Query: 656 SK------QPVITGLCRLHRGLC--SLKETFCLLEGHAVEKLIALLDHTNEKVVEASLAA 707
+K + V+ C L S + +++ K++ LL H V +L
Sbjct: 245 AKLIYYQDEEVLIDACWALSYLSDGSNERIQEVIDAKVCRKMVELLGHPTIAVQTPALRT 304
Query: 708 LSTVIDDGVDIEQGVMVLCEAQGIKPILDVLLEKRTENLQRRAVWVVERILRTDDIAYEV 767
+ ++ D Q +VL Q + +L+ LL+ +++ A W + I D +
Sbjct: 305 IGNIVTG--DDNQTQIVL-SVQALSHLLN-LLQSPKRAIRKEACWTISNITAGDKNQIQQ 360
Query: 768 SGDPNVSTALVDAFQHADYRTRQIAERALKH 798
D N+ +LV +A++ ++ A A+ +
Sbjct: 361 VIDANIIPSLVYLLANAEFEIQKEAAWAISN 391
Score = 80 (33.2 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 35/152 (23%), Positives = 71/152 (46%)
Query: 150 ELIPMIIDMLKSSSRKVRCTALETLR--IVVEEDDDNKEILGQGDTVRTIVKFL-SHELS 206
E +P ++ + S + + + R + +E+ +E++ G R +VKFL +
Sbjct: 67 EQLPSLVAEINSENPDLILKSTTAFRKLLSIEKSPPIEEVIKTGIVPR-LVKFLYMQDFP 125
Query: 207 REREEAVSLLYELSKSEALCEKIGSINGAILILVGMTSSKSENLLTVEKAEKTLANLEKC 266
+ + EA L ++ ++ NGAI + V + SS +++ E+A L N+
Sbjct: 126 QLQFEAAWALTNIASGTPEQTRVVIENGAIQVFVLLLSSPHDDVR--EQAVWALGNIAGD 183
Query: 267 ENNVRQMA-ENGRLQPLLTQILEGPQETKLSL 297
+ R + + L PLL+ +L+ P K+S+
Sbjct: 184 SHYCRDLVLSHNALPPLLS-LLQNPAAIKVSM 214
>UNIPROTKB|F1NF41 [details] [associations]
symbol:NSMCE2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000722 "telomere maintenance via recombination" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0000781 "chromosome, telomeric
region" evidence=IEA] [GO:0016605 "PML body" evidence=IEA]
[GO:0019789 "SUMO ligase activity" evidence=IEA] [GO:0030915
"Smc5-Smc6 complex" evidence=IEA] [GO:0034184 "positive regulation
of maintenance of mitotic sister chromatid cohesion" evidence=IEA]
[GO:0045842 "positive regulation of mitotic metaphase/anaphase
transition" evidence=IEA] [GO:0090398 "cellular senescence"
evidence=IEA] InterPro:IPR004181 InterPro:IPR026846 PROSITE:PS51044
GO:GO:0016605 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000724 GO:GO:0000781 GO:GO:0000722 GO:GO:0090398
GO:GO:0045842 GO:GO:0019789 GO:GO:0030915 GO:GO:0034184
PANTHER:PTHR21330 GeneTree:ENSGT00390000013961 EMBL:AADN02022479
IPI:IPI00592926 Ensembl:ENSGALT00000030778 OMA:GHSYEED
Uniprot:F1NF41
Length = 106
Score = 96 (38.9 bits), Expect = 0.00096, P = 0.00096
Identities = 22/76 (28%), Positives = 43/76 (56%)
Query: 33 FVCPLTKQVMRDPVTLEN-GQTFEREAIEKWFKECRENGRKPVCP---LTQKELRSTDLN 88
F+CP+T+ M+ PV + G ++E +AI K + ++ +K CP + +++ +DL
Sbjct: 28 FICPITQVEMKKPVRNKVCGHSYEEDAILKIIQTRKQQKKKVRCPKIGCSHDDVKGSDLV 87
Query: 89 PSIALRNTIEEWNARN 104
P AL+ I+ N ++
Sbjct: 88 PDEALKRAIDSQNKQS 103
>UNIPROTKB|F1NH96 [details] [associations]
symbol:KPNA1 "Importin subunit alpha" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006606 "protein import into nucleus"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] InterPro:IPR000225 InterPro:IPR002652
InterPro:IPR016024 InterPro:IPR024931 Pfam:PF00514 Pfam:PF01749
PIRSF:PIRSF005673 PROSITE:PS50176 PROSITE:PS51214 SMART:SM00185
GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0008565 GO:GO:0006606
GeneTree:ENSGT00610000085856 EMBL:AADN02061160 EMBL:AADN02061161
EMBL:AADN02061162 EMBL:AADN02061163 EMBL:AADN02061164
EMBL:AADN02061165 EMBL:AADN02061166 EMBL:AADN02061167
EMBL:AADN02061168 EMBL:AADN02061169 IPI:IPI00818482
Ensembl:ENSGALT00000023305 ArrayExpress:F1NH96 Uniprot:F1NH96
Length = 536
Score = 120 (47.3 bits), Expect = 0.00098, P = 0.00098
Identities = 32/118 (27%), Positives = 64/118 (54%)
Query: 680 LLEGHAVEKLIALLDHTNEKVVEASLAALSTVIDDGVDIEQGVMVLCEAQGIKPILDVLL 739
+++ +L+ LL H + KVV +L A+ ++ G DI+ V++ C A ++ +L LL
Sbjct: 289 VIDAGVCRRLVELLMHNDYKVVSPALRAVGNIVT-GDDIQTQVILNCSA--LQSLLH-LL 344
Query: 740 EKRTENLQRRAVWVVERILRTDDIAYEVSG-DPNVSTALVDAFQHADYRTRQIAERAL 796
E++++ A W + I + + + D ++ AL++ Q A++RTR+ A A+
Sbjct: 345 SSPKESIKKEACWTISNITAGNRAQIQQTVIDAHIFPALINILQTAEFRTRKEAAWAI 402
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.134 0.376 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 813 780 0.00094 121 3 11 22 0.40 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 115
No. of states in DFA: 618 (66 KB)
Total size of DFA: 345 KB (2174 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 72.16u 0.11s 72.27t Elapsed: 00:00:03
Total cpu time: 72.19u 0.11s 72.30t Elapsed: 00:00:03
Start: Tue May 21 17:31:14 2013 End: Tue May 21 17:31:17 2013
WARNINGS ISSUED: 1