Query 003530
Match_columns 813
No_of_seqs 383 out of 3230
Neff 9.4
Searched_HMMs 29240
Date Tue Mar 26 17:28:48 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/003530.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1581-1585//hhsearch_pdb/003530hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2z6g_A B-catenin; FULL-length, 1.0 1 1 384.6 45.6 496 149-716 149-666 (780)
2 3now_A UNC-45 protein, SD10334 1.0 1 1 379.5 39.3 543 149-763 192-786 (810)
3 2z6h_A Catenin beta-1, beta-ca 1.0 1 1 374.0 48.7 527 146-752 10-558 (644)
4 2z6h_A Catenin beta-1, beta-ca 1.0 1 1 372.9 42.5 532 187-786 9-551 (644)
5 2z6g_A B-catenin; FULL-length, 1.0 1 1 372.4 47.2 562 150-786 115-687 (780)
6 1jdh_A Beta-catenin; beta-cate 1.0 1 1 368.8 46.4 505 147-757 14-528 (529)
7 3now_A UNC-45 protein, SD10334 1.0 1 1 358.6 39.0 562 163-802 163-783 (810)
8 1jdh_A Beta-catenin; beta-cate 1.0 1 1 342.1 36.5 512 187-800 12-529 (529)
9 3ul1_B Importin subunit alpha- 1.0 1 1 330.1 41.3 415 235-762 58-481 (510)
10 3tpo_A Importin subunit alpha- 1.0 1 1 324.4 41.7 416 234-762 76-500 (529)
No 1
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=1.00 E-value=1 Score=384.60 Aligned_cols=496 Identities=19% Similarity=0.179 Sum_probs=270.1
Q ss_pred CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHC-CCCHHHHHHHHCCC-CHHHHHHHHHHHHHHHCCCHHH
Q ss_conf 696799999753899999999999999842049300246513-78789999985357-6799999999999962173257
Q 003530 149 SELIPMIIDMLKSSSRKVRCTALETLRIVVEEDDDNKEILGQ-GDTVRTIVKFLSHE-LSREREEAVSLLYELSKSEALC 226 (813)
Q Consensus 149 ~g~i~~Lv~lL~s~~~~~~~~a~~~L~~l~~~~~~~~~~i~~-~g~i~~Lv~lL~~~-~~~~~~~a~~~L~~Ls~~~~~~ 226 (813)
.|++|.|+++|.+++..+|..|+.+|.+++.+. .++..+.. .|+++.|+++|+++ +..++..|+.+|++|+.+.+++
T Consensus 149 ~g~ip~Lv~lL~~~d~~vr~~A~~~L~~L~~~~-~~~~~i~~~~~~i~~Lv~~L~~~~d~~vr~~Aa~aL~~Ls~~~~~~ 227 (780)
T 2z6g_A 149 TRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKE-ASRHAIMRSPQMVSAIVRTMQNTNDVETARCTSGTLHNLSHHREGL 227 (780)
T ss_dssp HHHHHHHHHHHHCSCHHHHHHHHHHHHHHHTSH-HHHHHHTTCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTSHHHH
T ss_pred HCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC-HHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHH
T ss_conf 387999999877999999999999999996798-4189987550839999999757999999999999999996796368
Q ss_pred HHHHHHHCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC-CCHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHC
Q ss_conf 68864344699999840368989799999999988320587-63889998599199999970699788999999998843
Q 003530 227 EKIGSINGAILILVGMTSSKSENLLTVEKAEKTLANLEKCE-NNVRQMAENGRLQPLLTQILEGPQETKLSLAAFLGDLA 305 (813)
Q Consensus 227 ~~i~~~~g~i~~Lv~lL~~~s~~~~~~~~A~~~L~~Ls~~~-~~~~~i~~~g~i~~Lv~~L~~~~~~~~~~a~~~L~~L~ 305 (813)
..+.. .|+|+.|+.+|. +.++.++..|+.+|.|++... ..+..+.+.|+++.|+.+|.+.+..++..++.+|.+++
T Consensus 228 ~~i~~-~g~I~~Lv~lL~--~~~~~v~~~A~~aL~nLa~~~~~~~~~v~~~g~v~~Lv~lL~~~~~~v~~~a~~aL~~La 304 (780)
T 2z6g_A 228 LAIFK-SGGIPALVNMLG--SPVDSVLFHAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILA 304 (780)
T ss_dssp HHHHH-TTHHHHHHHHTT--CSCHHHHHHHHHHHHHHHHHSTTHHHHHHHTTHHHHHHHGGGCCCHHHHHHHHHHHHHHH
T ss_pred HHHHH-CCCHHHHHHHHC--CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf 99987-588999999975--998899999999999996798354999997698889999980287889999999999984
Q ss_pred C-CCHHHHHHHHHH-HHHHHHHHHCCC-HHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHH
Q ss_conf 8-902499999624-999999972599-9999999999999508961079999729959999998001899999237999
Q 003530 306 L-NSDVKVLVARTV-GSCLINIMKSGN-MQAREAALKALNQISSCEPSAKVLIHAGILPPLVKDLFTVGSNHLPMRLKEV 382 (813)
Q Consensus 306 ~-~~~~~~~i~~~g-i~~Lv~lL~~~~-~~~~~~a~~aL~~Ls~~~~~~~~i~~~g~i~~Lv~lL~~~~~~~~~~~~~~~ 382 (813)
. +++++..+.+.+ ++.|+++|++++ ...++.++.+|++|+.++.++..+++.|+++.|+.++.+. +..+++.
T Consensus 305 ~~~~e~~~~i~~~~~i~~Lv~lL~~~~~~~~~~~a~~aL~~Ls~~~~~~~~i~~~g~l~~Ll~lL~~~-----~~~~~~~ 379 (780)
T 2z6g_A 305 YGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDP-----SQRLVQN 379 (780)
T ss_dssp TTCHHHHHHHHTTTHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTSTTHHHHHHHTTHHHHHGGGTTCS-----CHHHHHH
T ss_pred CCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHCCC-----CHHHHHH
T ss_conf 47928899999759889999998468889999999999998431737899999806599999987177-----6499999
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHH
Q ss_conf 99999999706998765444899752211302999997321799689999999999800699722899999994698799
Q 003530 383 SATILANVVNSGHDFDSITVGPDNQTLVSEDIVHNLLHLISNTGPTIECKLLQVLVGLTSSPTTVLSVVSAIKSSGATIS 462 (813)
Q Consensus 383 a~~~L~nL~~~~~~~~~~~~~~~~~~l~~~~~i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~i~~~g~i~~ 462 (813)
++++|.+++....... ...++++.|+.+|.+.++.+++.++++|.+|+..+. ..+..+.+.|+++.
T Consensus 380 a~~~L~~L~~~~~~~~-----------~~~~~i~~Lv~lL~~~d~~vr~~A~~aL~~L~~~~~---~~~~~i~~~g~i~~ 445 (780)
T 2z6g_A 380 CLWTLRNLSDAATKQE-----------GMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNY---KNKMMVCQVGGIEA 445 (780)
T ss_dssp HHHHHHHHHTTCTTCS-----------CCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTSSCH---HHHHHHHTTTHHHH
T ss_pred HHHHHHHHHCCCHHHH-----------HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCH---HHHHHHHHCCCHHH
T ss_conf 9999999852344344-----------564499999999749998999999999999985888---88999998789999
Q ss_pred HHHHHHCC-C-HHHHHHHHHHHHHHCCCCCH--HHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHH
Q ss_conf 99865079-9-27999999999981888877--88999730203399898741048877399999999972178899788
Q 003530 463 LVQFVEAP-Q-NDLRLASIELIQNLSPHMGH--ELADALRGAVGQLGSLIRVISENVGISKEQAAAVGLLAELPERDLGL 538 (813)
Q Consensus 463 Lv~lL~~~-~-~~v~~~A~~~L~~Ls~~~~~--~~~~~l~~~~g~i~~Lv~ll~~~~~~~~~~~~a~~~L~~L~~~~~~~ 538 (813)
|+.++.+. + ..++..|+++|.+|+..... .....+... |+++.|+++|.+++. .+++..++++|+||+.+ ...
T Consensus 446 Lv~lL~~~~~~~~v~~~Al~aL~nL~~~~~~~~~~~~~v~~~-~~l~~L~~lL~~~~~-~~v~~~A~~aL~nLa~~-~~~ 522 (780)
T 2z6g_A 446 LVRTVLRAGDREDITEPAICALRHLTSRHQDAEMAQNAVRLH-YGLPVVVKLLHPPSH-WPLIKATVGLIRNLALC-PAN 522 (780)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTTSSSTTHHHHHHHHHHT-TCHHHHHHTTSTTCC-HHHHHHHHHHHHHHHSS-HHH
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC-CCHHHHHHHHCCCCH-HHHHHHHHHHHHHHHCC-HHH
T ss_conf 999997139878999999999999874585279999999975-888999998568876-78999999999998539-887
Q ss_pred HHHHHHCCCHHHHHHHHHHHCCCC------------CCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHH
Q ss_conf 999982695799999963200366------------66776540336769999998815689991799999973835899
Q 003530 539 TRQMLDEGAFGLIFSRVKSIQLGE------------TRGSRFVTPFLEGLLSVLARVTFVLSDEPDAIALCCEHNLAALF 606 (813)
Q Consensus 539 ~~~l~~~g~i~~L~~lL~~~~~~~------------~~~~~~~~~~~e~a~~aL~~l~~~l~~~~~~~~~~~~~~~i~~L 606 (813)
+..+.+.|+++.|+.+|.+..... ........++++.++++|.+++ .++..+..+.+.|+++.|
T Consensus 523 ~~~i~~~g~i~~Lv~lL~~~~~~~~~~aa~al~nq~~~~~~~~~~v~~~a~~aL~~La----~~~~~~~~l~~~~~i~~L 598 (780)
T 2z6g_A 523 HAPLREQGAIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEACTGALHILA----RDIHNRIVIRGLNTIPLF 598 (780)
T ss_dssp HHHHHHTTHHHHHHHHHHHHHHHHHHTTC------CCSTTCCHHHHHHHHHHHHHHHT----TSHHHHHHHHHTCCHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHCCHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHH----CCHHHHHHHHHCCCHHHH
T ss_conf 9999978889999999872015677787522454112304676999999999999983----584669999877868999
Q ss_pred HHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCH
Q ss_conf 99982079248999999998643000334567888899888766443234589887877445664476653132303332
Q 003530 607 IELLQSNGLDKVQMVSATALENLSLESKNLTKLPELPPSGFCASIFPCFSKQPVITGLCRLHRGLCSLKETFCLLEGHAV 686 (813)
Q Consensus 607 ~~lL~~~~~~~vk~~Aa~aL~~ls~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gai 686 (813)
+++|.++ ++.++..|+.+|++++.+.. ....+.+.|++
T Consensus 599 v~lL~~~-~~~v~~~a~~aL~~L~~~~~-----------------------------------------~~~~i~~~g~i 636 (780)
T 2z6g_A 599 VQLLYSP-IENIQRVAAGVLCELAQDKE-----------------------------------------AAEAIEAEGAT 636 (780)
T ss_dssp HHGGGCS-CHHHHHHHHHHHHHHHTSHH-----------------------------------------HHHHHHHTTCH
T ss_pred HHHHCCC-CHHHHHHHHHHHHHHHCCHH-----------------------------------------HHHHHHHCCCH
T ss_conf 9997699-88999999999999955988-----------------------------------------88999977879
Q ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHHCCC
Q ss_conf 889974046855689999998876530585
Q 003530 687 EKLIALLDHTNEKVVEASLAALSTVIDDGV 716 (813)
Q Consensus 687 ~~Lv~lL~~~~~~v~~~A~~aL~~L~~~~~ 716 (813)
++|++++.++|.+|+..|+.||.++..+..
T Consensus 637 ~~L~~Ll~~~~~~Vr~~A~~aL~~l~~~~~ 666 (780)
T 2z6g_A 637 APLTELLHSRNEGVATYAAAVLFRMSEDKP 666 (780)
T ss_dssp HHHHHGGGCSCHHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHCCCH
T ss_conf 999998758998999999999999971881
No 2
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=1.00 E-value=1 Score=379.48 Aligned_cols=543 Identities=12% Similarity=0.086 Sum_probs=401.0
Q ss_pred CCCHHHHHHHHCC-------C----CHHHHHHHHHHHHHHHCCCC-CHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHH
Q ss_conf 6967999997538-------9----99999999999998420493-0024651378789999985357679999999999
Q 003530 149 SELIPMIIDMLKS-------S----SRKVRCTALETLRIVVEEDD-DNKEILGQGDTVRTIVKFLSHELSREREEAVSLL 216 (813)
Q Consensus 149 ~g~i~~Lv~lL~s-------~----~~~~~~~a~~~L~~l~~~~~-~~~~~i~~~g~i~~Lv~lL~~~~~~~~~~a~~~L 216 (813)
.+++..+...-.. + ..+.|..+.-+|.++-.+-. +..+.....-.-..+-..+..++.+....|++++
T Consensus 192 ~~g~~~~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~al 271 (810)
T 3now_A 192 IRGLCRLLDVCSELEDYKYESAMDITGSSSTIASVCLARIYENMYYDEAKARFTDQIDEYIKDKLLAPDMESKVRVTVAI 271 (810)
T ss_dssp TTHHHHHHHHHTCCSSSCCSSCCCCCTTHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf 86699999997257665665568998527999999999999882563567899999999999985468737689999999
Q ss_pred HHHHCCC-HHHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHCCCCHHHHH
Q ss_conf 9962173-257688643446999998403689897999999999883205876388999859919999997069978899
Q 003530 217 YELSKSE-ALCEKIGSINGAILILVGMTSSKSENLLTVEKAEKTLANLEKCENNVRQMAENGRLQPLLTQILEGPQETKL 295 (813)
Q Consensus 217 ~~Ls~~~-~~~~~i~~~~g~i~~Lv~lL~~~s~~~~~~~~A~~~L~~Ls~~~~~~~~i~~~g~i~~Lv~~L~~~~~~~~~ 295 (813)
.++...+ +....++...|+++.|+.++. +++...+..|++++.+.+.+++++..+.+.|+ ++|+.++.+++..++.
T Consensus 272 t~i~~g~~~~~~~~~~~~G~v~~li~Ll~--s~~~~~q~~A~~al~~aa~~~~~R~~I~~~gv-~~L~~Ll~s~~~~vr~ 348 (810)
T 3now_A 272 TALLNGPLDVGNQVVAREGILQMILAMAT--TDDELQQRVACECLIAASSKKDKAKALCEQGV-DILKRLYHSKNDGIRV 348 (810)
T ss_dssp HHHHSSSHHHHHHHHHTTTHHHHHHHHHH--SSCHHHHHHHHHHHHHHTTSHHHHHTTHHHHH-HHHHHHTTCSCHHHHH
T ss_pred HHHHCCCHHHHHHHHHCCCHHHHHHHHHC--CCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCC-HHHHHHHCCCCHHHHH
T ss_conf 99965989888999832026999999867--99788999999999998189099999998696-7999987489788999
Q ss_pred HHHHHHHHHCCCC--HHH-HHHHHHH----HHHHHHHHHCC--CHHHHHHHHHHHHHHHCCCCCHHHHH-HCCCHHHHHH
Q ss_conf 9999998843890--249-9999624----99999997259--99999999999999508961079999-7299599999
Q 003530 296 SLAAFLGDLALNS--DVK-VLVARTV----GSCLINIMKSG--NMQAREAALKALNQISSCEPSAKVLI-HAGILPPLVK 365 (813)
Q Consensus 296 ~a~~~L~~L~~~~--~~~-~~i~~~g----i~~Lv~lL~~~--~~~~~~~a~~aL~~Ls~~~~~~~~i~-~~g~i~~Lv~ 365 (813)
.++.+|.++.... +.+ ..+.+.+ ++.|+++|.++ +.++++.|+++|.+|+..++.+..++ +.|++|.|+.
T Consensus 349 ~Al~~L~kl~s~~~~d~~~~~~~~g~i~~Lv~~l~~lL~~~~~d~~v~~~AveaLayLS~~~~vk~~lv~d~g~Ip~LV~ 428 (810)
T 3now_A 349 RALVGLCKLGSYGGQDAAIRPFGDGAALKLAEACRRFLIKPGKDKDIRRWAADGLAYLTLDAECKEKLIEDKASIHALMD 428 (810)
T ss_dssp HHHHHHHHHHTTTTTTTSCCSSTTTHHHHHHHHHHHHHHCSSCCSSHHHHHHHHHHHHTTSHHHHHHHHHCHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCCCCCCCHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHH
T ss_conf 99999997441446686535320044999999999986578998789999999999983792789999982064999999
Q ss_pred HHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC------C-CCCC-----------------CCCCCCHHHHHHHHHH
Q ss_conf 98001899999237999999999997069987654------4-4899-----------------7522113029999973
Q 003530 366 DLFTVGSNHLPMRLKEVSATILANVVNSGHDFDSI------T-VGPD-----------------NQTLVSEDIVHNLLHL 421 (813)
Q Consensus 366 lL~~~~~~~~~~~~~~~a~~~L~nL~~~~~~~~~~------~-~~~~-----------------~~~l~~~~~i~~Lv~l 421 (813)
++.+. +..++..++++|.||+...+....+ . .... -+.+...|++|.|+.+
T Consensus 429 LL~s~-----d~~i~~~al~~L~NLt~~~d~q~~~~~l~~la~~s~~~v~~~~~ld~~~~v~~r~~~VveaGaVp~LV~L 503 (810)
T 3now_A 429 LARGG-----NQSCLYGVVTTFVNLCNAYEKQEMLPEMIELAKFAKQHIPEEHELDDVDFINKRITVLANEGITTALCAL 503 (810)
T ss_dssp HHHTT-----CGGGHHHHHHHHHHHTTCSCCCCCCCSCGGGTTTTCCSCCCSSCHHHHHHHHHHHHHHHHTTHHHHHHHH
T ss_pred HHCCC-----CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHH
T ss_conf 96799-----8189999999999985796021212899999987642476556433177779999999988599999999
Q ss_pred HCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHH-HHCC
Q ss_conf 217996899999999998006997228999999946987999986507992799999999998188887788999-7302
Q 003530 422 ISNTGPTIECKLLQVLVGLTSSPTTVLSVVSAIKSSGATISLVQFVEAPQNDLRLASIELIQNLSPHMGHELADA-LRGA 500 (813)
Q Consensus 422 L~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~A~~~L~~Ls~~~~~~~~~~-l~~~ 500 (813)
+.++++.+|+.++++|.+++.++ +.+..+.++|++++|+.+|.++++..+..|+++|.+|+...+++.... ....
T Consensus 504 L~s~s~~vqe~Aa~aL~NLA~d~----~~r~~Vv~~Gaip~Lv~LL~s~~~~~k~~Aa~AL~nL~~~~~p~~~~~~~~~~ 579 (810)
T 3now_A 504 AKTESHNSQELIARVLNAVCGLK----ELRGKVVQEGGVKALLRMALEGTEKGKRHATQALARIGITINPEVSFSGQRSL 579 (810)
T ss_dssp HTCCCHHHHHHHHHHHHHHHTSH----HHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHSCHHHHTTTHHHH
T ss_pred HCCCCHHHHHHHHHHHHHHCCCH----HHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCHHHH
T ss_conf 85999899999999999985898----89999998789999999970598889999999999996589856653100231
Q ss_pred CCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 03399898741048877399999999972178899788999982695799999963200366667765403367699999
Q 003530 501 VGQLGSLIRVISENVGISKEQAAAVGLLAELPERDLGLTRQMLDEGAFGLIFSRVKSIQLGETRGSRFVTPFLEGLLSVL 580 (813)
Q Consensus 501 ~g~i~~Lv~ll~~~~~~~~~~~~a~~~L~~L~~~~~~~~~~l~~~g~i~~L~~lL~~~~~~~~~~~~~~~~~~e~a~~aL 580 (813)
+++++|+++|.++.. ...+..|+++|.||+..+.+.++.+.++|+++.|+.+|.+ ....+++.++.+|
T Consensus 580 -~aIppLv~LL~~~~~-~l~~~eAl~AL~NLa~~~d~~~~~Ii~aG~l~~Lv~LL~s----------~~~~Vq~~A~~~L 647 (810)
T 3now_A 580 -DVIRPLLNLLQQDCT-ALENFESLMALTNLASMNESVRQRIIKEQGVSKIEYYLME----------DHLYLTRAAAQCL 647 (810)
T ss_dssp -HTHHHHHHTTSTTSC-HHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHHHS----------CCTTHHHHHHHHH
T ss_pred -CHHHHHHHHHCCCCC-HHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHCC----------CCHHHHHHHHHHH
T ss_conf -579999998678982-7889999999999846998999999986888999999828----------9999999999999
Q ss_pred HHHHCCCCCCHHHHHHHHH-CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9881568999179999997-383589999982079248999999998643000334567888899888766443234589
Q 003530 581 ARVTFVLSDEPDAIALCCE-HNLAALFIELLQSNGLDKVQMVSATALENLSLESKNLTKLPELPPSGFCASIFPCFSKQP 659 (813)
Q Consensus 581 ~~l~~~l~~~~~~~~~~~~-~~~i~~L~~lL~~~~~~~vk~~Aa~aL~~ls~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 659 (813)
++++ .+++.+..+.+ .|.++.|+.++.++ +..+|+.|+|+|+|++...+..
T Consensus 648 ~NLa----~~~~~~~~~v~~~g~l~~Lv~LL~s~-d~~vq~~Aa~ALanLt~~s~~~----------------------- 699 (810)
T 3now_A 648 CNLV----MSEDVIKMFEGNNDRVKFLALLCEDE-DEETATACAGALAIITSVSVKC----------------------- 699 (810)
T ss_dssp HHHT----TSHHHHHHHHSSSSHHHHHHHGGGCS-SHHHHHHHHHHHHHHHHHCHHH-----------------------
T ss_pred HHHH----CCHHHHHHHHHCCCCHHHHHHHHCCC-CHHHHHHHHHHHHHHHCCCHHH-----------------------
T ss_conf 9996----79599999986168089999984699-9899999999999986799899-----------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHH-CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHH
Q ss_conf 88787744566447665313230-33328899740468556899999988765305853135789988605908999997
Q 003530 660 VITGLCRLHRGLCSLKETFCLLE-GHAVEKLIALLDHTNEKVVEASLAALSTVIDDGVDIEQGVMVLCEAQGIKPILDVL 738 (813)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~l~~-~gai~~Lv~lL~~~~~~v~~~A~~aL~~L~~~~~~~~~~~~~i~~~~~i~~L~~ll 738 (813)
...+++ +|++++|+++|.++|.+++..|+.+|+|+...+. .....+.++|++++|.+++
T Consensus 700 -----------------~~~ii~~~g~I~~Lv~LL~s~d~~vq~~A~~aL~NL~~~s~---e~~~~l~e~G~i~~L~~LL 759 (810)
T 3now_A 700 -----------------CEKILAIASWLDILHTLIANPSPAVQHRGIVIILNMINAGE---EIAKKLFETDIMELLSGLG 759 (810)
T ss_dssp -----------------HHHHHTSTTHHHHHHHHHTCSSHHHHHHHHHHHHHHHTTCH---HHHHHHHTSTHHHHHTTSC
T ss_pred -----------------HHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCH---HHHHHHHHCCCHHHHHHHH
T ss_conf -----------------99999874889899998779988999999999999986999---9999999897889999998
Q ss_pred HHC--CCHHHHHHHHHHHHHHHCCHHH
Q ss_conf 321--9767999999999998710223
Q 003530 739 LEK--RTENLQRRAVWVVERILRTDDI 763 (813)
Q Consensus 739 ~~~--~~~~~~~~a~~aL~~i~~~~~~ 763 (813)
..+ ++.++.+.|..+|+.+......
T Consensus 760 ~~~d~~~~~i~e~Al~aL~~ll~~g~~ 786 (810)
T 3now_A 760 QLPDDTRAKAREVATQCLAAAERYRII 786 (810)
T ss_dssp CCTTSTTHHHHHHHHHHHHHHHHHHTC
T ss_pred HCCCCCCHHHHHHHHHHHHHHHHCCCC
T ss_conf 276657679999999999999867986
No 3
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=1.00 E-value=1 Score=373.98 Aligned_cols=527 Identities=18% Similarity=0.168 Sum_probs=431.7
Q ss_pred CCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHC-CCCHHHHHHHHCCC-CHHHHHHHHHHHHHHHCCC
Q ss_conf 002696799999753899999999999999842049300246513-78789999985357-6799999999999962173
Q 003530 146 VHNSELIPMIIDMLKSSSRKVRCTALETLRIVVEEDDDNKEILGQ-GDTVRTIVKFLSHE-LSREREEAVSLLYELSKSE 223 (813)
Q Consensus 146 i~~~g~i~~Lv~lL~s~~~~~~~~a~~~L~~l~~~~~~~~~~i~~-~g~i~~Lv~lL~~~-~~~~~~~a~~~L~~Ls~~~ 223 (813)
....|++|.|+.+|++++..++..|+.+|.+++.+. .++..+.. .|+++.|+++|.++ +.+++..|+.+|.+++.++
T Consensus 10 ~~~~g~i~~Lv~lL~~~~~~vr~~A~~~L~~La~~~-~~~~~i~~~~~~i~~Lv~~L~~~~~~~~~~~A~~~L~~Ls~~~ 88 (644)
T 2z6h_A 10 ELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKE-ASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHR 88 (644)
T ss_dssp --CTTTHHHHHHHHTCSCHHHHHHHHHHHHHHHTST-THHHHHTTCHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHTTSH
T ss_pred HHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC-HHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCH
T ss_conf 565530999999873999999999999999997787-5399998650769999999864899999999999999984691
Q ss_pred HHHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC-CCCHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHH
Q ss_conf 2576886434469999984036898979999999998832058-763889998599199999970699788999999998
Q 003530 224 ALCEKIGSINGAILILVGMTSSKSENLLTVEKAEKTLANLEKC-ENNVRQMAENGRLQPLLTQILEGPQETKLSLAAFLG 302 (813)
Q Consensus 224 ~~~~~i~~~~g~i~~Lv~lL~~~s~~~~~~~~A~~~L~~Ls~~-~~~~~~i~~~g~i~~Lv~~L~~~~~~~~~~a~~~L~ 302 (813)
+++..+.. .|+++.|+.+|. +.++.++..|+.+|.|++.. +..+..+++.|+++.|+.+|.+++..++..++.+|.
T Consensus 89 ~~~~~i~~-~g~i~~Lv~lL~--~~~~~v~~~A~~aL~nL~~~~~~~~~~v~~~g~i~~Lv~lL~~~~~~~~~~a~~~L~ 165 (644)
T 2z6h_A 89 EGLLAIFK-SGGIPALVKMLG--SPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQ 165 (644)
T ss_dssp HHHHHHHT-TTHHHHHHHHTT--CSSHHHHHHHHHHHHHHHHHSTTHHHHHHHTTHHHHHHHGGGCCCHHHHHHHHHHHH
T ss_pred HHHHHHHH-CCCHHHHHHHHH--CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHH
T ss_conf 65899998-598999999980--898999999999999997376103899997799489999877597899999999999
Q ss_pred HHCC-CCHHHHHHHHHH-HHHHHHHHHCC-CHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHCCCCCCCCHHH
Q ss_conf 8438-902499999624-99999997259-99999999999999508961079999729959999998001899999237
Q 003530 303 DLAL-NSDVKVLVARTV-GSCLINIMKSG-NMQAREAALKALNQISSCEPSAKVLIHAGILPPLVKDLFTVGSNHLPMRL 379 (813)
Q Consensus 303 ~L~~-~~~~~~~i~~~g-i~~Lv~lL~~~-~~~~~~~a~~aL~~Ls~~~~~~~~i~~~g~i~~Lv~lL~~~~~~~~~~~~ 379 (813)
+++. +++++..+.+.| ++.|+++|++. .+..++.++.+|++|+.+++++..+++.|+++.|+.++... +..+
T Consensus 166 ~La~~~~~~~~~i~~~g~v~~Lv~lL~~~~~~~~~~~a~~~L~nLs~~~~~~~~l~~~g~l~~L~~ll~~~-----~~~~ 240 (644)
T 2z6h_A 166 ILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDP-----SQRL 240 (644)
T ss_dssp HHHTTCHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHHHHHHHHHHTTCTTHHHHHHHTTHHHHHHTTTTCS-----CHHH
T ss_pred HHHHCCCHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHCC-----CHHH
T ss_conf 99826958999999869849999999728828899999999999806950189999878799999998269-----8899
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCC
Q ss_conf 99999999999706998765444899752211302999997321799689999999999800699722899999994698
Q 003530 380 KEVSATILANVVNSGHDFDSITVGPDNQTLVSEDIVHNLLHLISNTGPTIECKLLQVLVGLTSSPTTVLSVVSAIKSSGA 459 (813)
Q Consensus 380 ~~~a~~~L~nL~~~~~~~~~~~~~~~~~~l~~~~~i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~i~~~g~ 459 (813)
++.++++|.|++....... ...++++.|+.++.+.++++++.++++|.+|+..+. ..+..+.+.|+
T Consensus 241 ~~~a~~~L~nL~~~~~~~~-----------~~~~~i~~Lv~lL~~~d~~v~~~a~~aL~~L~~~~~---~~~~~v~~~g~ 306 (644)
T 2z6h_A 241 VQNCLWTLRNLSDAATKQE-----------GMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNY---KNKMMVCQVGG 306 (644)
T ss_dssp HHHHHHHHHHHGGGCTTCC-----------SCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCH---HHHHHHHHTTH
T ss_pred HHHHHHHHHHHHHCCHHHH-----------HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCH---HHHHHHHHCCC
T ss_conf 9999999999862551434-----------363599999999738988999999999999871998---99999997588
Q ss_pred HHHHHHHHHCCC--HHHHHHHHHHHHHHCCCCCH--HHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCC
Q ss_conf 799998650799--27999999999981888877--88999730203399898741048877399999999972178899
Q 003530 460 TISLVQFVEAPQ--NDLRLASIELIQNLSPHMGH--ELADALRGAVGQLGSLIRVISENVGISKEQAAAVGLLAELPERD 535 (813)
Q Consensus 460 i~~Lv~lL~~~~--~~v~~~A~~~L~~Ls~~~~~--~~~~~l~~~~g~i~~Lv~ll~~~~~~~~~~~~a~~~L~~L~~~~ 535 (813)
++.|+.++.+.+ +.++..|+++|.+|+...+. .....+... |+++.|+++|.+++. .+++..++++|+||+.++
T Consensus 307 v~~Lv~lL~~~~~~~~v~~~a~~aL~nL~~~~~~~~~~q~~v~~~-~~l~~L~~lL~~~~~-~~v~~~a~~~L~nLa~~~ 384 (644)
T 2z6h_A 307 IEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLH-YGLPVVVKLLHPPSH-WPLIKATVGLIRNLALCP 384 (644)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHTSSSTTHHHHHHHHHHT-THHHHHHHTTSTTCC-HHHHHHHHHHHHHHTTSG
T ss_pred HHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC-CCHHHHHHHHCCCCC-HHHHHHHHHHHHHHCCCH
T ss_conf 799999998049857999999999999855894479999999974-691899998576674-579999999999973698
Q ss_pred HHHHHHHHHCCCHHHHHHHHHHHCCCCCC------------CCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCH
Q ss_conf 78899998269579999996320036666------------776540336769999998815689991799999973835
Q 003530 536 LGLTRQMLDEGAFGLIFSRVKSIQLGETR------------GSRFVTPFLEGLLSVLARVTFVLSDEPDAIALCCEHNLA 603 (813)
Q Consensus 536 ~~~~~~l~~~g~i~~L~~lL~~~~~~~~~------------~~~~~~~~~e~a~~aL~~l~~~l~~~~~~~~~~~~~~~i 603 (813)
.. +..+.+.|+++.|+.+|.+......+ ......++++.++++|.+++ .++..+..+.+.|++
T Consensus 385 ~~-~~~i~~~~~i~~Lv~lL~~~~~~vr~~a~~al~n~~~~~~~~~~~v~~~a~~aL~~La----~~~~~~~~l~~~~~i 459 (644)
T 2z6h_A 385 AN-HAPLREQGAIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHILA----RDVHNRIVIRGLNTI 459 (644)
T ss_dssp GG-HHHHHHTTHHHHHHHHHHHHHHHHTTC----------CCSSCHHHHHHHHHHHHHHHT----TSHHHHHHHHHTTCH
T ss_pred HH-HHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHHHHHH----CCHHHHHHHHHCCCH
T ss_conf 77-7999976879999999850032466675204553011135659999999999999996----199999998747867
Q ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHC
Q ss_conf 89999982079248999999998643000334567888899888766443234589887877445664476653132303
Q 003530 604 ALFIELLQSNGLDKVQMVSATALENLSLESKNLTKLPELPPSGFCASIFPCFSKQPVITGLCRLHRGLCSLKETFCLLEG 683 (813)
Q Consensus 604 ~~L~~lL~~~~~~~vk~~Aa~aL~~ls~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 683 (813)
+.|++++.++ ++.++..|+++|++++...+. ...+.+.
T Consensus 460 ~~Lv~lL~~~-~~~v~~~a~~aL~~l~~~~~~-----------------------------------------~~~i~~~ 497 (644)
T 2z6h_A 460 PLFVQLLYSP-IENIQRVAAGVLCELAQDKEA-----------------------------------------AEAIEAE 497 (644)
T ss_dssp HHHHHHTTCS-CHHHHHHHHHHHHHHHTSHHH-----------------------------------------HHHHHHT
T ss_pred HHHHHHHCCC-CHHHHHHHHHHHHHHHCCHHH-----------------------------------------HHHHHHC
T ss_conf 9999997189-778999999999999729877-----------------------------------------8999975
Q ss_pred CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHH
Q ss_conf 332889974046855689999998876530585313578998860590899999732197679999999
Q 003530 684 HAVEKLIALLDHTNEKVVEASLAALSTVIDDGVDIEQGVMVLCEAQGIKPILDVLLEKRTENLQRRAVW 752 (813)
Q Consensus 684 gai~~Lv~lL~~~~~~v~~~A~~aL~~L~~~~~~~~~~~~~i~~~~~i~~L~~ll~~~~~~~~~~~a~~ 752 (813)
|++++|++++.++|++|+..|+.+|.++..+... .....+ +++.+..++. .+...|..+..
T Consensus 498 g~l~~L~~ll~~~~~~vr~~A~~aL~~l~~~~~~--~~~~~~----~~~il~~~~~--~~~~~w~~~~~ 558 (644)
T 2z6h_A 498 GATAPLTELLHSRNEGVATYAAAVLFRMSEDKPQ--DYKKRL----SVELTSSLFR--TEPMAWNETAD 558 (644)
T ss_dssp TCHHHHHHHTTCSCHHHHHHHHHHHHHHTTTSCH--HHHHHH----HHHHHHHHSC--CSCGGGC----
T ss_pred CCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCH--HHHCCC----CHHHHHHHHH--CCCCCCCCCCC
T ss_conf 9866899987699889999999999998646838--653044----5699999981--79865355653
No 4
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=1.00 E-value=1 Score=372.93 Aligned_cols=532 Identities=14% Similarity=0.129 Sum_probs=429.6
Q ss_pred HHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf 65137878999998535767999999999999621732576886434469999984036898979999999998832058
Q 003530 187 ILGQGDTVRTIVKFLSHELSREREEAVSLLYELSKSEALCEKIGSINGAILILVGMTSSKSENLLTVEKAEKTLANLEKC 266 (813)
Q Consensus 187 ~i~~~g~i~~Lv~lL~~~~~~~~~~a~~~L~~Ls~~~~~~~~i~~~~g~i~~Lv~lL~~~s~~~~~~~~A~~~L~~Ls~~ 266 (813)
.....|+++.|+.+|+++++.+|..|+.+|.+++.+...+..+....|+++.|+++|.. +.+++++..|+.+|.+|+..
T Consensus 9 ~~~~~g~i~~Lv~lL~~~~~~vr~~A~~~L~~La~~~~~~~~i~~~~~~i~~Lv~~L~~-~~~~~~~~~A~~~L~~Ls~~ 87 (644)
T 2z6h_A 9 AELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQN-TNDVETARCTAGTLHNLSHH 87 (644)
T ss_dssp ---CTTTHHHHHHHHTCSCHHHHHHHHHHHHHHHTSTTHHHHHTTCHHHHHHHHHHHHS-CCCHHHHHHHHHHHHHHTTS
T ss_pred HHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHC-CCCHHHHHHHHHHHHHHHCC
T ss_conf 55655309999998739999999999999999977875399998650769999999864-89999999999999998469
Q ss_pred CCCHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHH-HHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf 76388999859919999997069978899999999884389-02499999624-99999997259999999999999995
Q 003530 267 ENNVRQMAENGRLQPLLTQILEGPQETKLSLAAFLGDLALN-SDVKVLVARTV-GSCLINIMKSGNMQAREAALKALNQI 344 (813)
Q Consensus 267 ~~~~~~i~~~g~i~~Lv~~L~~~~~~~~~~a~~~L~~L~~~-~~~~~~i~~~g-i~~Lv~lL~~~~~~~~~~a~~aL~~L 344 (813)
++++..+.+.|+++.|+.+|.+++..++..++++|.+++.. +..+..+.+.| ++.|+++|.+++.+++..++.+|.+|
T Consensus 88 ~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nL~~~~~~~~~~v~~~g~i~~Lv~lL~~~~~~~~~~a~~~L~~L 167 (644)
T 2z6h_A 88 REGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQIL 167 (644)
T ss_dssp HHHHHHHHTTTHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHSTTHHHHHHHTTHHHHHHHGGGCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHH
T ss_conf 16589999859899999998089899999999999999737610389999779948999987759789999999999999
Q ss_pred HC-CCCCHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 08-96107999972995999999800189999923799999999999706998765444899752211302999997321
Q 003530 345 SS-CEPSAKVLIHAGILPPLVKDLFTVGSNHLPMRLKEVSATILANVVNSGHDFDSITVGPDNQTLVSEDIVHNLLHLIS 423 (813)
Q Consensus 345 s~-~~~~~~~i~~~g~i~~Lv~lL~~~~~~~~~~~~~~~a~~~L~nL~~~~~~~~~~~~~~~~~~l~~~~~i~~Lv~lL~ 423 (813)
+. +++++..+.+.|+++.|+.++.+.. ....+..++.+|+|++..+..+. .+...|+++.|+.++.
T Consensus 168 a~~~~~~~~~i~~~g~v~~Lv~lL~~~~----~~~~~~~a~~~L~nLs~~~~~~~---------~l~~~g~l~~L~~ll~ 234 (644)
T 2z6h_A 168 AYGNQESKLIILASGGPQALVNIMRTYT----YEKLLWTTSRVLKVLSVCSSNKP---------AIVEAGGMQALGLHLT 234 (644)
T ss_dssp HTTCHHHHHHHHHTTHHHHHHHHHTTCC----CHHHHHHHHHHHHHHTTCTTHHH---------HHHHTTHHHHHHTTTT
T ss_pred HHCCCHHHHHHHHCCCHHHHHHHHHCCC----HHHHHHHHHHHHHHHHCCCCCHH---------HHHHCCCHHHHHHHHH
T ss_conf 8269589999998698499999997288----28899999999999806950189---------9998787999999982
Q ss_pred CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCC
Q ss_conf 79968999999999980069972289999999469879999865079927999999999981888877889997302033
Q 003530 424 NTGPTIECKLLQVLVGLTSSPTTVLSVVSAIKSSGATISLVQFVEAPQNDLRLASIELIQNLSPHMGHELADALRGAVGQ 503 (813)
Q Consensus 424 ~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~A~~~L~~Ls~~~~~~~~~~l~~~~g~ 503 (813)
+.++.+++.++++|.+++....... . ..++++.|+.++++++.+++..|+++|.+|+.+ +.+....+.+. |+
T Consensus 235 ~~~~~~~~~a~~~L~nL~~~~~~~~-~-----~~~~i~~Lv~lL~~~d~~v~~~a~~aL~~L~~~-~~~~~~~v~~~-g~ 306 (644)
T 2z6h_A 235 DPSQRLVQNCLWTLRNLSDAATKQE-G-----MEGLLGTLVQLLGSDDINVVTCAAGILSNLTCN-NYKNKMMVCQV-GG 306 (644)
T ss_dssp CSCHHHHHHHHHHHHHHGGGCTTCC-S-----CHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHTT-CHHHHHHHHHT-TH
T ss_pred CCCHHHHHHHHHHHHHHHHCCHHHH-H-----HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC-CHHHHHHHHHC-CC
T ss_conf 6988999999999999862551434-3-----635999999997389889999999999998719-98999999975-88
Q ss_pred HHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCH---HHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 998987410488773999999999721788997---88999982695799999963200366667765403367699999
Q 003530 504 LGSLIRVISENVGISKEQAAAVGLLAELPERDL---GLTRQMLDEGAFGLIFSRVKSIQLGETRGSRFVTPFLEGLLSVL 580 (813)
Q Consensus 504 i~~Lv~ll~~~~~~~~~~~~a~~~L~~L~~~~~---~~~~~l~~~g~i~~L~~lL~~~~~~~~~~~~~~~~~~e~a~~aL 580 (813)
++.|++++.+.+...+++..|+++|+||+..+. ..+..+.+.|+++.|+.+|.+. ....+++.++++|
T Consensus 307 v~~Lv~lL~~~~~~~~v~~~a~~aL~nL~~~~~~~~~~q~~v~~~~~l~~L~~lL~~~---------~~~~v~~~a~~~L 377 (644)
T 2z6h_A 307 IEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPP---------SHWPLIKATVGLI 377 (644)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHTSSSTTHHHHHHHHHHTTHHHHHHHTTSTT---------CCHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHCCC---------CCHHHHHHHHHHH
T ss_conf 7999999980498579999999999998558944799999999746918999985766---------7457999999999
Q ss_pred HHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHH--HCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 988156899917999999738358999998207924899999999864--300033456788889988876644323458
Q 003530 581 ARVTFVLSDEPDAIALCCEHNLAALFIELLQSNGLDKVQMVSATALEN--LSLESKNLTKLPELPPSGFCASIFPCFSKQ 658 (813)
Q Consensus 581 ~~l~~~l~~~~~~~~~~~~~~~i~~L~~lL~~~~~~~vk~~Aa~aL~~--ls~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 658 (813)
.+++. ++..+..+.+.|++|.|++++.++ ++.+|+.|+|++.| +......-. +......++
T Consensus 378 ~nLa~----~~~~~~~i~~~~~i~~Lv~lL~~~-~~~vr~~a~~al~n~~~~~~~~~~~---------v~~~a~~aL--- 440 (644)
T 2z6h_A 378 RNLAL----CPANHAPLREQGAIPRLVQLLVRA-HQDTQRRTSMGGTQQQFVEGVRMEE---------IVEGCTGAL--- 440 (644)
T ss_dssp HHHTT----SGGGHHHHHHTTHHHHHHHHHHHH-HHHHTTC----------CCSSCHHH---------HHHHHHHHH---
T ss_pred HHHCC----CHHHHHHHHHCCCHHHHHHHHHCC-CHHHHHHHHHCCCCCHHCCCCCHHH---------HHHHHHHHH---
T ss_conf 99736----987779999768799999998500-3246667520455301113565999---------999999999---
Q ss_pred CCCCCCCCCCCCC-CCCCCCCHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHH
Q ss_conf 9887877445664-476653132303332889974046855689999998876530585313578998860590899999
Q 003530 659 PVITGLCRLHRGL-CSLKETFCLLEGHAVEKLIALLDHTNEKVVEASLAALSTVIDDGVDIEQGVMVLCEAQGIKPILDV 737 (813)
Q Consensus 659 ~~~~~~~~~~~~~-~~~~~~~~l~~~gai~~Lv~lL~~~~~~v~~~A~~aL~~L~~~~~~~~~~~~~i~~~~~i~~L~~l 737 (813)
..+ ......+.+.+.|++++|+++|.+.+++++..|+.+|++|..+. .....|.+.|++++|.++
T Consensus 441 ----------~~La~~~~~~~~l~~~~~i~~Lv~lL~~~~~~v~~~a~~aL~~l~~~~----~~~~~i~~~g~l~~L~~l 506 (644)
T 2z6h_A 441 ----------HILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDK----EAAEAIEAEGATAPLTEL 506 (644)
T ss_dssp ----------HHHTTSHHHHHHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHHTSH----HHHHHHHHTTCHHHHHHH
T ss_pred ----------HHHHCCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCH----HHHHHHHHCCCHHHHHHH
T ss_conf ----------999619999999874786799999971897789999999999997298----778999975986689998
Q ss_pred HHHCCCHHHHHHHHHHHHHHHCCHHHH--HHHCCCCCCHHHHHHHHHHCCC
Q ss_conf 732197679999999999987102235--3311998505789877430581
Q 003530 738 LLEKRTENLQRRAVWVVERILRTDDIA--YEVSGDPNVSTALVDAFQHADY 786 (813)
Q Consensus 738 l~~~~~~~~~~~a~~aL~~i~~~~~~~--~~~~~~~~~~~~Lv~~l~~~~~ 786 (813)
+ .+++++++..|+++|.++..+.... ...+ ...+..++.+.+.
T Consensus 507 l-~~~~~~vr~~A~~aL~~l~~~~~~~~~~~~~-----~~il~~~~~~~~~ 551 (644)
T 2z6h_A 507 L-HSRNEGVATYAAAVLFRMSEDKPQDYKKRLS-----VELTSSLFRTEPM 551 (644)
T ss_dssp T-TCSCHHHHHHHHHHHHHHTTTSCHHHHHHHH-----HHHHHHHSCCSCG
T ss_pred H-CCCCHHHHHHHHHHHHHHHCCCCHHHHCCCC-----HHHHHHHHHCCCC
T ss_conf 7-6998899999999999986468386530445-----6999999817986
No 5
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=1.00 E-value=1 Score=372.41 Aligned_cols=562 Identities=14% Similarity=0.144 Sum_probs=453.9
Q ss_pred CCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHH
Q ss_conf 96799999753899999999999999842049300246513787899999853576799999999999962173257688
Q 003530 150 ELIPMIIDMLKSSSRKVRCTALETLRIVVEEDDDNKEILGQGDTVRTIVKFLSHELSREREEAVSLLYELSKSEALCEKI 229 (813)
Q Consensus 150 g~i~~Lv~lL~s~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~~~~~a~~~L~~Ls~~~~~~~~i 229 (813)
.+++.+++.|.+++.+++..++..++.. ++..+. .|++|.|+.+|.+++..+|..|+.+|.+|+.+...+..+
T Consensus 115 ~~i~~lv~~L~~~~~~~r~~a~~~l~~~------~~~~i~-~g~ip~Lv~lL~~~d~~vr~~A~~~L~~L~~~~~~~~~i 187 (780)
T 2z6g_A 115 SAHPTNVQRLAEPSQMLKHAVVNLINYQ------DDAELA-TRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAI 187 (780)
T ss_dssp -----------CCSCHHHHHHHHHHHHH------HHHHHH-HHHHHHHHHHHHCSCHHHHHHHHHHHHHHHTSHHHHHHH
T ss_pred CCHHHHHHHHCCCCHHHHHHHHHHHHHH------HHHHHH-HCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHH
T ss_conf 3089999982386599999999999861------377777-387999999877999999999999999996798418998
Q ss_pred HHHHCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCC-C
Q ss_conf 643446999998403689897999999999883205876388999859919999997069978899999999884389-0
Q 003530 230 GSINGAILILVGMTSSKSENLLTVEKAEKTLANLEKCENNVRQMAENGRLQPLLTQILEGPQETKLSLAAFLGDLALN-S 308 (813)
Q Consensus 230 ~~~~g~i~~Lv~lL~~~s~~~~~~~~A~~~L~~Ls~~~~~~~~i~~~g~i~~Lv~~L~~~~~~~~~~a~~~L~~L~~~-~ 308 (813)
....|+++.|+.+|.. +.+++++..|+.+|++|+..++++..+.+.|+++.|+.+|.+++..++..++++|.+++.. +
T Consensus 188 ~~~~~~i~~Lv~~L~~-~~d~~vr~~Aa~aL~~Ls~~~~~~~~i~~~g~I~~Lv~lL~~~~~~v~~~A~~aL~nLa~~~~ 266 (780)
T 2z6g_A 188 MRSPQMVSAIVRTMQN-TNDVETARCTSGTLHNLSHHREGLLAIFKSGGIPALVNMLGSPVDSVLFHAITTLHNLLLHQE 266 (780)
T ss_dssp TTCHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHTSHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHST
T ss_pred HHCCCHHHHHHHHHCC-CCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCH
T ss_conf 7550839999999757-999999999999999996796368999875889999999759988999999999999967983
Q ss_pred HHHHHHHHHH-HHHHHHHHHCCCHHHHHHHHHHHHHHHC-CCCCHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHH
Q ss_conf 2499999624-9999999725999999999999999508-9610799997299599999980018999992379999999
Q 003530 309 DVKVLVARTV-GSCLINIMKSGNMQAREAALKALNQISS-CEPSAKVLIHAGILPPLVKDLFTVGSNHLPMRLKEVSATI 386 (813)
Q Consensus 309 ~~~~~i~~~g-i~~Lv~lL~~~~~~~~~~a~~aL~~Ls~-~~~~~~~i~~~g~i~~Lv~lL~~~~~~~~~~~~~~~a~~~ 386 (813)
+.+..+.+.| ++.|+++|.+++..++..++.+|.+++. +++++..+.+.|+++.|+.++.... ....++.++.+
T Consensus 267 ~~~~~v~~~g~v~~Lv~lL~~~~~~v~~~a~~aL~~La~~~~e~~~~i~~~~~i~~Lv~lL~~~~----~~~~~~~a~~a 342 (780)
T 2z6g_A 267 GAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYT----YEKLLWTTSRV 342 (780)
T ss_dssp THHHHHHHTTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHHHHHTTTHHHHHHHHHTTCC----CHHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCC----HHHHHHHHHHH
T ss_conf 54999997698889999980287889999999999984479288999997598899999984688----89999999999
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHH
Q ss_conf 99997069987654448997522113029999973217996899999999998006997228999999946987999986
Q 003530 387 LANVVNSGHDFDSITVGPDNQTLVSEDIVHNLLHLISNTGPTIECKLLQVLVGLTSSPTTVLSVVSAIKSSGATISLVQF 466 (813)
Q Consensus 387 L~nL~~~~~~~~~~~~~~~~~~l~~~~~i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~i~~~g~i~~Lv~l 466 (813)
|.+|+.....+. .+...|+++.|+.++.+.++.+++.++++|.+++...... . ...++++.|+.+
T Consensus 343 L~~Ls~~~~~~~---------~i~~~g~l~~Ll~lL~~~~~~~~~~a~~~L~~L~~~~~~~-~-----~~~~~i~~Lv~l 407 (780)
T 2z6g_A 343 LKVLSVCSSNKP---------AIVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLSDAATKQ-E-----GMEGLLGTLVQL 407 (780)
T ss_dssp HHHHHTSTTHHH---------HHHHTTHHHHHGGGTTCSCHHHHHHHHHHHHHHHTTCTTC-S-----CCHHHHHHHHHH
T ss_pred HHHHHCCHHHHH---------HHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHH-H-----HHHHHHHHHHHH
T ss_conf 998431737899---------9998065999999871776499999999999985234434-4-----564499999999
Q ss_pred HHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHH---HHHHHH
Q ss_conf 50799279999999999818888778899973020339989874104887739999999997217889978---899998
Q 003530 467 VEAPQNDLRLASIELIQNLSPHMGHELADALRGAVGQLGSLIRVISENVGISKEQAAAVGLLAELPERDLG---LTRQML 543 (813)
Q Consensus 467 L~~~~~~v~~~A~~~L~~Ls~~~~~~~~~~l~~~~g~i~~Lv~ll~~~~~~~~~~~~a~~~L~~L~~~~~~---~~~~l~ 543 (813)
+++++.+++..|+++|.+|+.. +.+....+... |+++.|++++.+++...+++..|+++|+||+..+.+ .+..+.
T Consensus 408 L~~~d~~vr~~A~~aL~~L~~~-~~~~~~~i~~~-g~i~~Lv~lL~~~~~~~~v~~~Al~aL~nL~~~~~~~~~~~~~v~ 485 (780)
T 2z6g_A 408 LGSDDINVVTCAAGILSNLTCN-NYKNKMMVCQV-GGIEALVRTVLRAGDREDITEPAICALRHLTSRHQDAEMAQNAVR 485 (780)
T ss_dssp TTCSCHHHHHHHHHHHHHHTSS-CHHHHHHHHTT-THHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSSTTHHHHHHHHH
T ss_pred HCCCCHHHHHHHHHHHHHHHHC-CHHHHHHHHHC-CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf 7499989999999999999858-88889999987-899999999971398789999999999998745852799999999
Q ss_pred HCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHH
Q ss_conf 26957999999632003666677654033676999999881568999179999997383589999982079248999999
Q 003530 544 DEGAFGLIFSRVKSIQLGETRGSRFVTPFLEGLLSVLARVTFVLSDEPDAIALCCEHNLAALFIELLQSNGLDKVQMVSA 623 (813)
Q Consensus 544 ~~g~i~~L~~lL~~~~~~~~~~~~~~~~~~e~a~~aL~~l~~~l~~~~~~~~~~~~~~~i~~L~~lL~~~~~~~vk~~Aa 623 (813)
+.++++.|+.+|.+. ....+++.++++|.+++ .++..+..+.+.|++|.|+++|.++ ++.+++.|+
T Consensus 486 ~~~~l~~L~~lL~~~---------~~~~v~~~A~~aL~nLa----~~~~~~~~i~~~g~i~~Lv~lL~~~-~~~~~~~aa 551 (780)
T 2z6g_A 486 LHYGLPVVVKLLHPP---------SHWPLIKATVGLIRNLA----LCPANHAPLREQGAIPRLVQLLVRA-HQDTQRRTS 551 (780)
T ss_dssp HTTCHHHHHHTTSTT---------CCHHHHHHHHHHHHHHH----SSHHHHHHHHHTTHHHHHHHHHHHH-HHHHHHTTC
T ss_pred HCCCHHHHHHHHCCC---------CHHHHHHHHHHHHHHHH----CCHHHHHHHHHCCCHHHHHHHHHHC-CHHHHHHHH
T ss_conf 758889999985688---------76789999999999985----3988799999788899999998720-156777875
Q ss_pred HHHHH--HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCHHHHCCCHHHHHHHHCCCCHHH
Q ss_conf 99864--30003345678888998887664432345898878774456644-7665313230333288997404685568
Q 003530 624 TALEN--LSLESKNLTKLPELPPSGFCASIFPCFSKQPVITGLCRLHRGLC-SLKETFCLLEGHAVEKLIALLDHTNEKV 700 (813)
Q Consensus 624 ~aL~~--ls~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~gai~~Lv~lL~~~~~~v 700 (813)
|++.| +......- .+......++ ..++ +....+.+++.|+|++|+++|.+.++.+
T Consensus 552 ~al~nq~~~~~~~~~---------~v~~~a~~aL-------------~~La~~~~~~~~l~~~~~i~~Lv~lL~~~~~~v 609 (780)
T 2z6g_A 552 MGGTQQQFVEGVRME---------EIVEACTGAL-------------HILARDIHNRIVIRGLNTIPLFVQLLYSPIENI 609 (780)
T ss_dssp ------CCSTTCCHH---------HHHHHHHHHH-------------HHHTTSHHHHHHHHHTCCHHHHHHGGGCSCHHH
T ss_pred HCCCCCHHHCCCCHH---------HHHHHHHHHH-------------HHHHCCHHHHHHHHHCCCHHHHHHHHCCCCHHH
T ss_conf 224541123046769---------9999999999-------------998358466999987786899999976998899
Q ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHH--HHHHHCCCCCCHHHHH
Q ss_conf 99999988765305853135789988605908999997321976799999999999871022--3533119985057898
Q 003530 701 VEASLAALSTVIDDGVDIEQGVMVLCEAQGIKPILDVLLEKRTENLQRRAVWVVERILRTDD--IAYEVSGDPNVSTALV 778 (813)
Q Consensus 701 ~~~A~~aL~~L~~~~~~~~~~~~~i~~~~~i~~L~~ll~~~~~~~~~~~a~~aL~~i~~~~~--~~~~~~~~~~~~~~Lv 778 (813)
+..|+.+|++|..+. .....|.+.|++++|.+++ .++++++++.|+++|.++..+.. ++.+. ....+.
T Consensus 610 ~~~a~~aL~~L~~~~----~~~~~i~~~g~i~~L~~Ll-~~~~~~Vr~~A~~aL~~l~~~~~~~~~~~l-----~~~ll~ 679 (780)
T 2z6g_A 610 QRVAAGVLCELAQDK----EAAEAIEAEGATAPLTELL-HSRNEGVATYAAAVLFRMSEDKPQDYKKRL-----SVELTS 679 (780)
T ss_dssp HHHHHHHHHHHHTSH----HHHHHHHHTTCHHHHHHGG-GCSCHHHHHHHHHHHHHHHTTSCTTHHHHH-----HHHHHH
T ss_pred HHHHHHHHHHHHCCH----HHHHHHHHCCCHHHHHHHH-CCCCHHHHHHHHHHHHHHHCCCHHHHHCCC-----CHHHHH
T ss_conf 999999999995598----8889999778799999987-589989999999999999718817554045-----278999
Q ss_pred HHHHHCCC
Q ss_conf 77430581
Q 003530 779 DAFQHADY 786 (813)
Q Consensus 779 ~~l~~~~~ 786 (813)
.++.+.+.
T Consensus 680 ~l~~~~~~ 687 (780)
T 2z6g_A 680 SLFRTEPM 687 (780)
T ss_dssp HC------
T ss_pred HHHHCCCC
T ss_conf 99807886
No 6
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=1.00 E-value=1 Score=368.75 Aligned_cols=505 Identities=17% Similarity=0.172 Sum_probs=392.6
Q ss_pred CCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHC-CCCHHHHHHHHCCC-CHHHHHHHHHHHHHHHCCCH
Q ss_conf 02696799999753899999999999999842049300246513-78789999985357-67999999999999621732
Q 003530 147 HNSELIPMIIDMLKSSSRKVRCTALETLRIVVEEDDDNKEILGQ-GDTVRTIVKFLSHE-LSREREEAVSLLYELSKSEA 224 (813)
Q Consensus 147 ~~~g~i~~Lv~lL~s~~~~~~~~a~~~L~~l~~~~~~~~~~i~~-~g~i~~Lv~lL~~~-~~~~~~~a~~~L~~Ls~~~~ 224 (813)
...|++|.|+++|++++..++..|+..|.+++.++ .++..+.. .|+++.|+++|.++ +.+++..++.+|++++.+++
T Consensus 14 ~~~~~i~~Lv~lL~~~~~~v~~~A~~~L~~l~~~~-~~~~~~~~~~~~i~~Lv~~L~~~~~~~~~~~a~~~L~~ls~~~~ 92 (529)
T 1jdh_A 14 LATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKE-ASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHRE 92 (529)
T ss_dssp ---CHHHHHHHHHTCSCHHHHHHHHHHHHHHHTSH-HHHHHHHTCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTSHH
T ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC-CCHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCH
T ss_conf 56734999999867899899999999999987478-11789986734699999998548999999999999999874924
Q ss_pred HHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC-CCCHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHH
Q ss_conf 576886434469999984036898979999999998832058-7638899985991999999706997889999999988
Q 003530 225 LCEKIGSINGAILILVGMTSSKSENLLTVEKAEKTLANLEKC-ENNVRQMAENGRLQPLLTQILEGPQETKLSLAAFLGD 303 (813)
Q Consensus 225 ~~~~i~~~~g~i~~Lv~lL~~~s~~~~~~~~A~~~L~~Ls~~-~~~~~~i~~~g~i~~Lv~~L~~~~~~~~~~a~~~L~~ 303 (813)
++..+.. .|+++.|+.++. ++++.++..|+.+|.+++.. +.++..+.+.|+++.|+++|.+++..++..++.+|.+
T Consensus 93 ~~~~i~~-~g~i~~L~~lL~--~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~ll~~~~~~~~~~~~~~L~~ 169 (529)
T 1jdh_A 93 GLLAIFK-SGGIPALVKMLG--SPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQI 169 (529)
T ss_dssp HHHHHHH-TTHHHHHHHHTT--CSCHHHHHHHHHHHHHHHHHCTTHHHHHHHHTHHHHHHHGGGCCCHHHHHHHHHHHHH
T ss_pred HHHHHHH-CCCHHHHHHHHC--CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf 2799998-499999999883--9988999999999999705884208999883997999999806988899999999999
Q ss_pred HCC-CCHHHHHHHHHH-HHHHHHHHHCC-CHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHCCCCCCCCHHHH
Q ss_conf 438-902499999624-99999997259-999999999999995089610799997299599999980018999992379
Q 003530 304 LAL-NSDVKVLVARTV-GSCLINIMKSG-NMQAREAALKALNQISSCEPSAKVLIHAGILPPLVKDLFTVGSNHLPMRLK 380 (813)
Q Consensus 304 L~~-~~~~~~~i~~~g-i~~Lv~lL~~~-~~~~~~~a~~aL~~Ls~~~~~~~~i~~~g~i~~Lv~lL~~~~~~~~~~~~~ 380 (813)
++. +++++..+.+.| ++.|+++|+++ ....++.++.+|++|+.+++++..+++.|+++.|+.++.+. +..++
T Consensus 170 la~~~~~~~~~i~~~~~i~~L~~ll~~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~g~~~~L~~ll~~~-----~~~~~ 244 (529)
T 1jdh_A 170 LAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDP-----SQRLV 244 (529)
T ss_dssp HHTTCHHHHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTSTTHHHHHHHTTHHHHHHTTTTSS-----CHHHH
T ss_pred HHHCCHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHCC-----CHHHH
T ss_conf 9818978899999879989999998708918899999999999864922279999878799999998679-----84999
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCH
Q ss_conf 99999999997069987654448997522113029999973217996899999999998006997228999999946987
Q 003530 381 EVSATILANVVNSGHDFDSITVGPDNQTLVSEDIVHNLLHLISNTGPTIECKLLQVLVGLTSSPTTVLSVVSAIKSSGAT 460 (813)
Q Consensus 381 ~~a~~~L~nL~~~~~~~~~~~~~~~~~~l~~~~~i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~i~~~g~i 460 (813)
+.++++|.|++....... ...++++.|++++.+.+++++..++++|.+++..+. +.+..+.+.|++
T Consensus 245 ~~a~~~L~~l~~~~~~~~-----------~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~L~~~~~---~~~~~~~~~~~v 310 (529)
T 1jdh_A 245 QNCLWTLRNLSDAATKQE-----------GMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNY---KNKMMVCQVGGI 310 (529)
T ss_dssp HHHHHHHHHHHTTCTTCS-----------CCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTTTCH---HHHHHHHHTTHH
T ss_pred HHHHHHHHHHHCCCHHHH-----------HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCH---HHHHHHHHCCCH
T ss_conf 999999998762880567-----------888479999999839988999999999999966987---889999985986
Q ss_pred HHHHHHHHCC--CHHHHHHHHHHHHHHCCCCCH--HHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCH
Q ss_conf 9999865079--927999999999981888877--889997302033998987410488773999999999721788997
Q 003530 461 ISLVQFVEAP--QNDLRLASIELIQNLSPHMGH--ELADALRGAVGQLGSLIRVISENVGISKEQAAAVGLLAELPERDL 536 (813)
Q Consensus 461 ~~Lv~lL~~~--~~~v~~~A~~~L~~Ls~~~~~--~~~~~l~~~~g~i~~Lv~ll~~~~~~~~~~~~a~~~L~~L~~~~~ 536 (813)
+.|+.++.+. +++++..|+++|.+++...+. .....+... |+++.|++++.+++. .+++..++++|+|+..++.
T Consensus 311 ~~L~~ll~~~~~~~~v~~~a~~~L~nl~~~~~~~~~~~~~i~~~-~~i~~L~~lL~~~~~-~~v~~~a~~~l~nl~~~~~ 388 (529)
T 1jdh_A 311 EALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLH-YGLPVVVKLLHPPSH-WPLIKATVGLIRNLALCPA 388 (529)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHTSSSTTHHHHHHHHHHT-TCHHHHHHTTSTTCC-HHHHHHHHHHHHHHTTSGG
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC-CCHHHHHHHHCCCCC-HHHHHHHHHHHHHHHCCHH
T ss_conf 99999998069779999999999999876996589999999984-993699987354351-6899999999999813832
Q ss_pred HHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCH
Q ss_conf 88999982695799999963200366667765403367699999988156899917999999738358999998207924
Q 003530 537 GLTRQMLDEGAFGLIFSRVKSIQLGETRGSRFVTPFLEGLLSVLARVTFVLSDEPDAIALCCEHNLAALFIELLQSNGLD 616 (813)
Q Consensus 537 ~~~~~l~~~g~i~~L~~lL~~~~~~~~~~~~~~~~~~e~a~~aL~~l~~~l~~~~~~~~~~~~~~~i~~L~~lL~~~~~~ 616 (813)
. +..+.+.|+++.|+.+|.+ .+..++..+++++.+.... + | .. ..
T Consensus 389 ~-~~~~~~~~~i~~L~~ll~~----------~~~~v~~~a~~~l~n~~~~---~----------~----------~~-~~ 433 (529)
T 1jdh_A 389 N-HAPLREQGAIPRLVQLLVR----------AHQDTQRRTSMGGTQQQFV---E----------G----------VR-ME 433 (529)
T ss_dssp G-HHHHHHTTHHHHHHHHHHH----------HHHHHC-----------CB---T----------T----------BC-HH
T ss_pred H-HHHHHHCCCHHHHHHHHHH----------HHHHHHHHHHCCCCCHHHH---C----------C----------CC-HH
T ss_conf 3-6788875877899999998----------7588888874056735665---0----------4----------64-89
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHCCC
Q ss_conf 89999999986430003345678888998887664432345898878774456644766531323033328899740468
Q 003530 617 KVQMVSATALENLSLESKNLTKLPELPPSGFCASIFPCFSKQPVITGLCRLHRGLCSLKETFCLLEGHAVEKLIALLDHT 696 (813)
Q Consensus 617 ~vk~~Aa~aL~~ls~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gai~~Lv~lL~~~ 696 (813)
.++..++.+|++++... .....+.+.|++++|+++|.++
T Consensus 434 ~i~~~~~~al~~L~~~~-----------------------------------------~~~~~l~~~~~v~~l~~ll~~~ 472 (529)
T 1jdh_A 434 EIVEGCTGALHILARDV-----------------------------------------HNRIVIRGLNTIPLFVQLLYSP 472 (529)
T ss_dssp HHHHHHHHHHHHHTTSH-----------------------------------------HHHHHHHHTTCHHHHHHGGGCS
T ss_pred HHHHHHHHHHHHHHCCC-----------------------------------------HHHHHHHCCCCCCHHHHHHCCC
T ss_conf 99999999999996092-----------------------------------------2789976068750899998188
Q ss_pred CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf 5568999999887653058531357899886059089999973219767999999999998
Q 003530 697 NEKVVEASLAALSTVIDDGVDIEQGVMVLCEAQGIKPILDVLLEKRTENLQRRAVWVVERI 757 (813)
Q Consensus 697 ~~~v~~~A~~aL~~L~~~~~~~~~~~~~i~~~~~i~~L~~ll~~~~~~~~~~~a~~aL~~i 757 (813)
+++++..|+.+|++|..++ .+...+.+.||+++|.+++ ++++++++++|.++|.+|
T Consensus 473 ~~~v~~~a~~~l~~l~~~~----~~~~~i~~~~~~~~L~~l~-~~~~~~v~~~a~~aL~~l 528 (529)
T 1jdh_A 473 IENIQRVAAGVLCELAQDK----EAAEAIEAEGATAPLTELL-HSRNEGVATYAAAVLFRM 528 (529)
T ss_dssp CHHHHHHHHHHHHHHTTSH----HHHHHHHHTTCHHHHHHGG-GCSSHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHCCH----HHHHHHHHCCCHHHHHHHH-CCCCHHHHHHHHHHHHHC
T ss_conf 2699999999999984487----7789999768757899986-699789999999999750
No 7
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=1.00 E-value=1 Score=358.58 Aligned_cols=562 Identities=14% Similarity=0.097 Sum_probs=402.9
Q ss_pred CHHHHHHHHHHHHHHHCCCC-CHHHHHHCCCCHHHHHHHHCCC-----------CHHHHHHHHHHHHHHHCCCH--HHHH
Q ss_conf 99999999999998420493-0024651378789999985357-----------67999999999999621732--5768
Q 003530 163 SRKVRCTALETLRIVVEEDD-DNKEILGQGDTVRTIVKFLSHE-----------LSREREEAVSLLYELSKSEA--LCEK 228 (813)
Q Consensus 163 ~~~~~~~a~~~L~~l~~~~~-~~~~~i~~~g~i~~Lv~lL~~~-----------~~~~~~~a~~~L~~Ls~~~~--~~~~ 228 (813)
+...|-.++..|-.-..... ..-...+..+|+..|+.+-..- ..++|.++..+|..+-.+-. ..+.
T Consensus 163 ~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~l~~~~~~~~~~~~~~ 242 (810)
T 3now_A 163 SGAARDGVIELITRNVHYTALEWAERLVEIRGLCRLLDVCSELEDYKYESAMDITGSSSTIASVCLARIYENMYYDEAKA 242 (810)
T ss_dssp CHHHHHHHHHHHHHHTTCTTTTHHHHHHHTTHHHHHHHHHTCCSSSCCSSCCCCCTTHHHHHHHHHHHHHHTCCSHHHHH
T ss_pred CHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHH
T ss_conf 76569999999997577133434321206866999999972576656655689985279999999999998825635678
Q ss_pred HHHHHCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC-CCHHHHH-HCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCC
Q ss_conf 864344699999840368989799999999988320587-6388999-85991999999706997889999999988438
Q 003530 229 IGSINGAILILVGMTSSKSENLLTVEKAEKTLANLEKCE-NNVRQMA-ENGRLQPLLTQILEGPQETKLSLAAFLGDLAL 306 (813)
Q Consensus 229 i~~~~g~i~~Lv~lL~~~s~~~~~~~~A~~~L~~Ls~~~-~~~~~i~-~~g~i~~Lv~~L~~~~~~~~~~a~~~L~~L~~ 306 (813)
.+. .-+-..+...+. ..+.+-...|++++.++...+ +-...+. ..|+++.|+.++.+.+..+++.+++++.+++.
T Consensus 243 ~~~-~~~~~~~~~~~~--~~~~~~~~~a~~alt~i~~g~~~~~~~~~~~~G~v~~li~Ll~s~~~~~q~~A~~al~~aa~ 319 (810)
T 3now_A 243 RFT-DQIDEYIKDKLL--APDMESKVRVTVAITALLNGPLDVGNQVVAREGILQMILAMATTDDELQQRVACECLIAASS 319 (810)
T ss_dssp HHH-HHHHHHHHHHHS--SCCHHHHHHHHHHHHHHHSSSHHHHHHHHHTTTHHHHHHHHHHSSCHHHHHHHHHHHHHHTT
T ss_pred HHH-HHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
T ss_conf 999-999999999854--68737689999999999659898889998320269999998679978899999999999818
Q ss_pred CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC--CCHHHHHHCCC----HHHHHHHHHCCCCCCCCHHHH
Q ss_conf 902499999624999999972599999999999999950896--10799997299----599999980018999992379
Q 003530 307 NSDVKVLVARTVGSCLINIMKSGNMQAREAALKALNQISSCE--PSAKVLIHAGI----LPPLVKDLFTVGSNHLPMRLK 380 (813)
Q Consensus 307 ~~~~~~~i~~~gi~~Lv~lL~~~~~~~~~~a~~aL~~Ls~~~--~~~~~i~~~g~----i~~Lv~lL~~~~~~~~~~~~~ 380 (813)
+.+++..+.+.|++.|+.++.+++..++..|+.+|+++.... +.....++.|+ ++.++++|.+.+ .+.+++
T Consensus 320 ~~~~R~~I~~~gv~~L~~Ll~s~~~~vr~~Al~~L~kl~s~~~~d~~~~~~~~g~i~~Lv~~l~~lL~~~~---~d~~v~ 396 (810)
T 3now_A 320 KKDKAKALCEQGVDILKRLYHSKNDGIRVRALVGLCKLGSYGGQDAAIRPFGDGAALKLAEACRRFLIKPG---KDKDIR 396 (810)
T ss_dssp SHHHHHTTHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTTTTTTSCCSSTTTHHHHHHHHHHHHHHCSS---CCSSHH
T ss_pred CCHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCHHHHHHHHHHHHCCCC---CCHHHH
T ss_conf 90999999986967999987489788999999999974414466865353200449999999999865789---987899
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCC--------------
Q ss_conf 999999999970699876544489975221130299999732179968999999999980069972--------------
Q 003530 381 EVSATILANVVNSGHDFDSITVGPDNQTLVSEDIVHNLLHLISNTGPTIECKLLQVLVGLTSSPTT-------------- 446 (813)
Q Consensus 381 ~~a~~~L~nL~~~~~~~~~~~~~~~~~~l~~~~~i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~~~~-------------- 446 (813)
+.|+++|.+|+..++.+.. .....|++|.|+.+|+++++.++..++++|.|++.+...
T Consensus 397 ~~AveaLayLS~~~~vk~~--------lv~d~g~Ip~LV~LL~s~d~~i~~~al~~L~NLt~~~d~q~~~~~l~~la~~s 468 (810)
T 3now_A 397 RWAADGLAYLTLDAECKEK--------LIEDKASIHALMDLARGGNQSCLYGVVTTFVNLCNAYEKQEMLPEMIELAKFA 468 (810)
T ss_dssp HHHHHHHHHHTTSHHHHHH--------HHHCHHHHHHHHHHHHTTCGGGHHHHHHHHHHHTTCSCCCCCCCSCGGGTTTT
T ss_pred HHHHHHHHHHHCCCHHHHH--------HHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf 9999999998379278999--------99820649999999679981899999999999857960212128999999876
Q ss_pred ------------HHHHH---HHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHH
Q ss_conf ------------28999---999946987999986507992799999999998188887788999730203399898741
Q 003530 447 ------------VLSVV---SAIKSSGATISLVQFVEAPQNDLRLASIELIQNLSPHMGHELADALRGAVGQLGSLIRVI 511 (813)
Q Consensus 447 ------------~~~~~---~~i~~~g~i~~Lv~lL~~~~~~v~~~A~~~L~~Ls~~~~~~~~~~l~~~~g~i~~Lv~ll 511 (813)
.+.+. ..+.+.|+++.|+.+++++++.+|..|+++|.+++. ..+....+.+. |++++|++++
T Consensus 469 ~~~v~~~~~ld~~~~v~~r~~~VveaGaVp~LV~LL~s~s~~vqe~Aa~aL~NLA~--d~~~r~~Vv~~-Gaip~Lv~LL 545 (810)
T 3now_A 469 KQHIPEEHELDDVDFINKRITVLANEGITTALCALAKTESHNSQELIARVLNAVCG--LKELRGKVVQE-GGVKALLRMA 545 (810)
T ss_dssp CCSCCCSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTCCCHHHHHHHHHHHHHHHT--SHHHHHHHHHT-THHHHHHHHH
T ss_pred HCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCC--CHHHHHHHHHC-CCHHHHHHHH
T ss_conf 42476556433177779999999988599999999859998999999999999858--98899999987-8999999997
Q ss_pred HCCCCCHHHHHHHHHHHHCCCCC-CHHHHHH-HHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC
Q ss_conf 04887739999999997217889-9788999-982695799999963200366667765403367699999988156899
Q 003530 512 SENVGISKEQAAAVGLLAELPER-DLGLTRQ-MLDEGAFGLIFSRVKSIQLGETRGSRFVTPFLEGLLSVLARVTFVLSD 589 (813)
Q Consensus 512 ~~~~~~~~~~~~a~~~L~~L~~~-~~~~~~~-l~~~g~i~~L~~lL~~~~~~~~~~~~~~~~~~e~a~~aL~~l~~~l~~ 589 (813)
.+++. ..+..|+++|+||+.+ +....-. -...+++|.|+.+|... .....+..++.+|.+++..
T Consensus 546 ~s~~~--~~k~~Aa~AL~nL~~~~~p~~~~~~~~~~~aIppLv~LL~~~---------~~~l~~~eAl~AL~NLa~~--- 611 (810)
T 3now_A 546 LEGTE--KGKRHATQALARIGITINPEVSFSGQRSLDVIRPLLNLLQQD---------CTALENFESLMALTNLASM--- 611 (810)
T ss_dssp HSSCH--HHHHHHHHHHHHHHHHSCHHHHTTTHHHHHTHHHHHHTTSTT---------SCHHHHHHHHHHHHHHTTS---
T ss_pred CCCCH--HHHHHHHHHHHHHHCCCCHHHHHCCHHHHCHHHHHHHHHCCC---------CCHHHHHHHHHHHHHHHCC---
T ss_conf 05988--899999999999965898566531002315799999986789---------8278899999999998469---
Q ss_pred CHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 91799999973835899999820792489999999986430003345678888998887664432345898878774456
Q 003530 590 EPDAIALCCEHNLAALFIELLQSNGLDKVQMVSATALENLSLESKNLTKLPELPPSGFCASIFPCFSKQPVITGLCRLHR 669 (813)
Q Consensus 590 ~~~~~~~~~~~~~i~~L~~lL~~~~~~~vk~~Aa~aL~~ls~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (813)
+.+.++.+.+.|++|.|+.++.++ ++.+|+.|+++|+|++.+.....
T Consensus 612 ~d~~~~~Ii~aG~l~~Lv~LL~s~-~~~Vq~~A~~~L~NLa~~~~~~~-------------------------------- 658 (810)
T 3now_A 612 NESVRQRIIKEQGVSKIEYYLMED-HLYLTRAAAQCLCNLVMSEDVIK-------------------------------- 658 (810)
T ss_dssp CHHHHHHHHHTTHHHHHHHHHHSC-CTTHHHHHHHHHHHHTTSHHHHH--------------------------------
T ss_pred CHHHHHHHHHCCCHHHHHHHHCCC-CHHHHHHHHHHHHHHHCCHHHHH--------------------------------
T ss_conf 989999999868889999998289-99999999999999967959999--------------------------------
Q ss_pred CCCCCCCCCHHHH-CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH-HCCCHHHHHHHHHCCCHHHH
Q ss_conf 6447665313230-333288997404685568999999887653058531357899886-05908999997321976799
Q 003530 670 GLCSLKETFCLLE-GHAVEKLIALLDHTNEKVVEASLAALSTVIDDGVDIEQGVMVLCE-AQGIKPILDVLLEKRTENLQ 747 (813)
Q Consensus 670 ~~~~~~~~~~l~~-~gai~~Lv~lL~~~~~~v~~~A~~aL~~L~~~~~~~~~~~~~i~~-~~~i~~L~~ll~~~~~~~~~ 747 (813)
.+++ .|++++|+.++.+.+.+++..|++||++|...+. .....+.+ .|++++|++++ .+++.+++
T Consensus 659 ---------~~v~~~g~l~~Lv~LL~s~d~~vq~~Aa~ALanLt~~s~---~~~~~ii~~~g~I~~Lv~LL-~s~d~~vq 725 (810)
T 3now_A 659 ---------MFEGNNDRVKFLALLCEDEDEETATACAGALAIITSVSV---KCCEKILAIASWLDILHTLI-ANPSPAVQ 725 (810)
T ss_dssp ---------HHHSSSSHHHHHHHGGGCSSHHHHHHHHHHHHHHHHHCH---HHHHHHHTSTTHHHHHHHHH-TCSSHHHH
T ss_pred ---------HHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCH---HHHHHHHHHCCCHHHHHHHH-CCCCHHHH
T ss_conf ---------998616808999998469998999999999999867998---99999998748898999987-79988999
Q ss_pred HHHHHHHHHHHCC-HHHHHHHCCCCCCHHHHHHHHHHC---CCHHHHHHHHHHHHHCCC
Q ss_conf 9999999998710-223533119985057898774305---810589999999873126
Q 003530 748 RRAVWVVERILRT-DDIAYEVSGDPNVSTALVDAFQHA---DYRTRQIAERALKHIDKI 802 (813)
Q Consensus 748 ~~a~~aL~~i~~~-~~~~~~~~~~~~~~~~Lv~~l~~~---~~~~~~~Aa~~L~~L~~~ 802 (813)
..|+|+|.++... +++...+.. .+++++|+++++.. +..+.+.|..+|.++-+.
T Consensus 726 ~~A~~aL~NL~~~s~e~~~~l~e-~G~i~~L~~LL~~~d~~~~~i~e~Al~aL~~ll~~ 783 (810)
T 3now_A 726 HRGIVIILNMINAGEEIAKKLFE-TDIMELLSGLGQLPDDTRAKAREVATQCLAAAERY 783 (810)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHT-STHHHHHTTSCCCTTSTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCHHHHHHHHH-CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHC
T ss_conf 99999999998699999999998-97889999998276657679999999999999867
No 8
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=1.00 E-value=1 Score=342.08 Aligned_cols=512 Identities=15% Similarity=0.148 Sum_probs=432.9
Q ss_pred HHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf 65137878999998535767999999999999621732576886434469999984036898979999999998832058
Q 003530 187 ILGQGDTVRTIVKFLSHELSREREEAVSLLYELSKSEALCEKIGSINGAILILVGMTSSKSENLLTVEKAEKTLANLEKC 266 (813)
Q Consensus 187 ~i~~~g~i~~Lv~lL~~~~~~~~~~a~~~L~~Ls~~~~~~~~i~~~~g~i~~Lv~lL~~~s~~~~~~~~A~~~L~~Ls~~ 266 (813)
.....|++|.|+.+|+++++.++..|+.+|.+++.++..+..+....|+++.|+++|.. +.+++++..++.+|++++..
T Consensus 12 ~~~~~~~i~~Lv~lL~~~~~~v~~~A~~~L~~l~~~~~~~~~~~~~~~~i~~Lv~~L~~-~~~~~~~~~a~~~L~~ls~~ 90 (529)
T 1jdh_A 12 AELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQN-TNDVETARCTAGTLHNLSHH 90 (529)
T ss_dssp -----CHHHHHHHHHTCSCHHHHHHHHHHHHHHHTSHHHHHHHHTCHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHC-CCCHHHHHHHHHHHHHHHCC
T ss_conf 01567349999998678998999999999999874781178998673469999999854-89999999999999998749
Q ss_pred CCCHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHH-HHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf 76388999859919999997069978899999999884389-02499999624-99999997259999999999999995
Q 003530 267 ENNVRQMAENGRLQPLLTQILEGPQETKLSLAAFLGDLALN-SDVKVLVARTV-GSCLINIMKSGNMQAREAALKALNQI 344 (813)
Q Consensus 267 ~~~~~~i~~~g~i~~Lv~~L~~~~~~~~~~a~~~L~~L~~~-~~~~~~i~~~g-i~~Lv~lL~~~~~~~~~~a~~aL~~L 344 (813)
++++..+.+.|+++.|+++|.++++.++..++++|.+++.+ +..+..+.+.| ++.|++++.+++.+++..++.+|.++
T Consensus 91 ~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~ll~~~~~~~~~~~~~~L~~l 170 (529)
T 1jdh_A 91 REGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQIL 170 (529)
T ss_dssp HHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCTTHHHHHHHHTHHHHHHHGGGCCCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf 24279999849999999988399889999999999997058842089998839979999998069888999999999999
Q ss_pred HCC-CCCHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 089-6107999972995999999800189999923799999999999706998765444899752211302999997321
Q 003530 345 SSC-EPSAKVLIHAGILPPLVKDLFTVGSNHLPMRLKEVSATILANVVNSGHDFDSITVGPDNQTLVSEDIVHNLLHLIS 423 (813)
Q Consensus 345 s~~-~~~~~~i~~~g~i~~Lv~lL~~~~~~~~~~~~~~~a~~~L~nL~~~~~~~~~~~~~~~~~~l~~~~~i~~Lv~lL~ 423 (813)
+.. ++++..+.+.|+++.|+.++.+.. +...+..++.+|.|++..+..+. .+...|+++.|+.++.
T Consensus 171 a~~~~~~~~~i~~~~~i~~L~~ll~~~~----~~~~~~~a~~~L~~l~~~~~~~~---------~~~~~g~~~~L~~ll~ 237 (529)
T 1jdh_A 171 AYGNQESKLIILASGGPQALVNIMRTYT----YEKLLWTTSRVLKVLSVCSSNKP---------AIVEAGGMQALGLHLT 237 (529)
T ss_dssp HTTCHHHHHHHHHTTHHHHHHHHHHHCC----CHHHHHHHHHHHHHHTTSTTHHH---------HHHHTTHHHHHHTTTT
T ss_pred HHCCHHHHHHHHHCCCHHHHHHHHHHCC----HHHHHHHHHHHHHHHHCCCCCHH---------HHHHCCCHHHHHHHHH
T ss_conf 8189788999998799899999987089----18899999999999864922279---------9998787999999986
Q ss_pred CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCC
Q ss_conf 79968999999999980069972289999999469879999865079927999999999981888877889997302033
Q 003530 424 NTGPTIECKLLQVLVGLTSSPTTVLSVVSAIKSSGATISLVQFVEAPQNDLRLASIELIQNLSPHMGHELADALRGAVGQ 503 (813)
Q Consensus 424 ~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~A~~~L~~Ls~~~~~~~~~~l~~~~g~ 503 (813)
+.++.+++.++++|.+++....... ...++++.|+.++.+++++++..|+++|.+|+.+ +.+....+.+. |+
T Consensus 238 ~~~~~~~~~a~~~L~~l~~~~~~~~------~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~L~~~-~~~~~~~~~~~-~~ 309 (529)
T 1jdh_A 238 DPSQRLVQNCLWTLRNLSDAATKQE------GMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCN-NYKNKMMVCQV-GG 309 (529)
T ss_dssp SSCHHHHHHHHHHHHHHHTTCTTCS------CCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTTT-CHHHHHHHHHT-TH
T ss_pred CCCHHHHHHHHHHHHHHHCCCHHHH------HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC-CHHHHHHHHHC-CC
T ss_conf 7984999999999998762880567------8884799999998399889999999999999669-87889999985-98
Q ss_pred HHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHH---HHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 9989874104887739999999997217889978---8999982695799999963200366667765403367699999
Q 003530 504 LGSLIRVISENVGISKEQAAAVGLLAELPERDLG---LTRQMLDEGAFGLIFSRVKSIQLGETRGSRFVTPFLEGLLSVL 580 (813)
Q Consensus 504 i~~Lv~ll~~~~~~~~~~~~a~~~L~~L~~~~~~---~~~~l~~~g~i~~L~~lL~~~~~~~~~~~~~~~~~~e~a~~aL 580 (813)
++.|++++.+.+...+++..++++|+||+.++.. .+..+.+.|+++.|+.+|.+. ....+++.++++|
T Consensus 310 v~~L~~ll~~~~~~~~v~~~a~~~L~nl~~~~~~~~~~~~~i~~~~~i~~L~~lL~~~---------~~~~v~~~a~~~l 380 (529)
T 1jdh_A 310 IEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPP---------SHWPLIKATVGLI 380 (529)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHTSSSTTHHHHHHHHHHTTCHHHHHHTTSTT---------CCHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHCCC---------CCHHHHHHHHHHH
T ss_conf 6999999980697799999999999998769965899999999849936999873543---------5168999999999
Q ss_pred HHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 98815689991799999973835899999820792489999999986430003345678888998887664432345898
Q 003530 581 ARVTFVLSDEPDAIALCCEHNLAALFIELLQSNGLDKVQMVSATALENLSLESKNLTKLPELPPSGFCASIFPCFSKQPV 660 (813)
Q Consensus 581 ~~l~~~l~~~~~~~~~~~~~~~i~~L~~lL~~~~~~~vk~~Aa~aL~~ls~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 660 (813)
.+++. ++..+..+.+.|++|.|+++++++ ++.+|+.|+|++.|....
T Consensus 381 ~nl~~----~~~~~~~~~~~~~i~~L~~ll~~~-~~~v~~~a~~~l~n~~~~---------------------------- 427 (529)
T 1jdh_A 381 RNLAL----CPANHAPLREQGAIPRLVQLLVRA-HQDTQRRTSMGGTQQQFV---------------------------- 427 (529)
T ss_dssp HHHTT----SGGGHHHHHHTTHHHHHHHHHHHH-HHHHC-----------CB----------------------------
T ss_pred HHHHC----CHHHHHHHHHCCCHHHHHHHHHHH-HHHHHHHHHCCCCCHHHH----------------------------
T ss_conf 99813----832367888758778999999987-588888874056735665----------------------------
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHH
Q ss_conf 87877445664476653132303332889974046855689999998876530585313578998860590899999732
Q 003530 661 ITGLCRLHRGLCSLKETFCLLEGHAVEKLIALLDHTNEKVVEASLAALSTVIDDGVDIEQGVMVLCEAQGIKPILDVLLE 740 (813)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~l~~~gai~~Lv~lL~~~~~~v~~~A~~aL~~L~~~~~~~~~~~~~i~~~~~i~~L~~ll~~ 740 (813)
.|+ ...+++..++.+|++|..+. .+...+.+.|++++|++++ .
T Consensus 428 ----------------------~~~----------~~~~i~~~~~~al~~L~~~~----~~~~~l~~~~~v~~l~~ll-~ 470 (529)
T 1jdh_A 428 ----------------------EGV----------RMEEIVEGCTGALHILARDV----HNRIVIRGLNTIPLFVQLL-Y 470 (529)
T ss_dssp ----------------------TTB----------CHHHHHHHHHHHHHHHTTSH----HHHHHHHHTTCHHHHHHGG-G
T ss_pred ----------------------CCC----------CHHHHHHHHHHHHHHHHCCC----HHHHHHHCCCCCCHHHHHH-C
T ss_conf ----------------------046----------48999999999999996092----2789976068750899998-1
Q ss_pred CCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHC
Q ss_conf 197679999999999987102235331199850578987743058105899999998731
Q 003530 741 KRTENLQRRAVWVVERILRTDDIAYEVSGDPNVSTALVDAFQHADYRTRQIAERALKHID 800 (813)
Q Consensus 741 ~~~~~~~~~a~~aL~~i~~~~~~~~~~~~~~~~~~~Lv~~l~~~~~~~~~~Aa~~L~~L~ 800 (813)
+++++++..|+++|.++....++...+...++ .+.|.+++++.|+.+++.|..+|.+|+
T Consensus 471 ~~~~~v~~~a~~~l~~l~~~~~~~~~i~~~~~-~~~L~~l~~~~~~~v~~~a~~aL~~l~ 529 (529)
T 1jdh_A 471 SPIENIQRVAAGVLCELAQDKEAAEAIEAEGA-TAPLTELLHSRNEGVATYAAAVLFRMS 529 (529)
T ss_dssp CSCHHHHHHHHHHHHHHTTSHHHHHHHHHTTC-HHHHHHGGGCSSHHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCC-HHHHHHHHCCCCHHHHHHHHHHHHHCC
T ss_conf 88269999999999998448777899997687-578999866997899999999997509
No 9
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=1.00 E-value=1 Score=330.09 Aligned_cols=415 Identities=18% Similarity=0.227 Sum_probs=298.3
Q ss_pred HHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCC--HHHHHHCCCHHHHHHHHCCC-CHHHHHHHHHHHHHHCC-CCHH
Q ss_conf 69999984036898979999999998832058763--88999859919999997069-97889999999988438-9024
Q 003530 235 AILILVGMTSSKSENLLTVEKAEKTLANLEKCENN--VRQMAENGRLQPLLTQILEG-PQETKLSLAAFLGDLAL-NSDV 310 (813)
Q Consensus 235 ~i~~Lv~lL~~~s~~~~~~~~A~~~L~~Ls~~~~~--~~~i~~~g~i~~Lv~~L~~~-~~~~~~~a~~~L~~L~~-~~~~ 310 (813)
.|+.||+.+. |++++.+..|+..++.+...+.+ ...++++|+||+||++|... ++.++..++++|+|++. ++++
T Consensus 58 ~i~~~v~~l~--s~d~~~q~~a~~~~rklls~e~~ppi~~ii~~G~ip~LV~lL~~~~~~~lq~~Aa~aL~nias~~~e~ 135 (510)
T 3ul1_B 58 SVEDIVKGIN--SNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQ 135 (510)
T ss_dssp CHHHHHHHHT--SSCHHHHHHHHHHHHHHHTCSSCCCHHHHHHTTHHHHHHHHTTCTTCHHHHHHHHHHHHHHHTSCHHH
T ss_pred HHHHHHHHHC--CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHH
T ss_conf 0999999845--99999999999999998657889629999988888999998778998999999999999996499999
Q ss_pred HHHHHHHH-HHHHHHHHHCCCHHHHHHHHHHHHHHHCC-CCCHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
Q ss_conf 99999624-99999997259999999999999995089-61079999729959999998001899999237999999999
Q 003530 311 KVLVARTV-GSCLINIMKSGNMQAREAALKALNQISSC-EPSAKVLIHAGILPPLVKDLFTVGSNHLPMRLKEVSATILA 388 (813)
Q Consensus 311 ~~~i~~~g-i~~Lv~lL~~~~~~~~~~a~~aL~~Ls~~-~~~~~~i~~~g~i~~Lv~lL~~~~~~~~~~~~~~~a~~~L~ 388 (813)
+..+.+.| +|.|+++|.+++..+++.|+++|+||+.+ +.++..+.+.|++++|+.++.............+.++++|+
T Consensus 136 ~~~vv~~GaIp~Lv~lL~s~~~~v~e~A~~aL~nLa~d~~~~r~~v~~~G~i~~Ll~lL~~~~~~~~~~~~~~~a~~~L~ 215 (510)
T 3ul1_B 136 TKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLS 215 (510)
T ss_dssp HHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHHTCSSCGGGSCHHHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf 99999788799999988699989999999999999718899999999869817999999734610445999999999999
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHH
Q ss_conf 99706998765444899752211302999997321799689999999999800699722899999994698799998650
Q 003530 389 NVVNSGHDFDSITVGPDNQTLVSEDIVHNLLHLISNTGPTIECKLLQVLVGLTSSPTTVLSVVSAIKSSGATISLVQFVE 468 (813)
Q Consensus 389 nL~~~~~~~~~~~~~~~~~~l~~~~~i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~i~~~g~i~~Lv~lL~ 468 (813)
|++........ .....++++.|+.++.+.+++++..++++|.+|+..+. +....+.+.|+++.|+.++.
T Consensus 216 nl~~~~~~~~~--------~~~~~~~lp~L~~LL~~~~~~v~~~A~~aL~~L~~~~~---~~~~~i~~~g~i~~Lv~lL~ 284 (510)
T 3ul1_B 216 NLCRNKNPAPP--------LDAVEQILPTLVRLLHHNDPEVLADSCWAISYLTDGPN---ERIEMVVKKGVVPQLVKLLG 284 (510)
T ss_dssp HHHCCCSSCCC--------HHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTSSCH---HHHHHHHTTTCHHHHHHHHT
T ss_pred HHHHCCCCHHH--------HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHH---HHHHHHHHCCCCHHHHHHHC
T ss_conf 87531110257--------99997699999999816879999999999999860215---66789986365125556613
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCH
Q ss_conf 79927999999999981888877889997302033998987410488773999999999721788997889999826957
Q 003530 469 APQNDLRLASIELIQNLSPHMGHELADALRGAVGQLGSLIRVISENVGISKEQAAAVGLLAELPERDLGLTRQMLDEGAF 548 (813)
Q Consensus 469 ~~~~~v~~~A~~~L~~Ls~~~~~~~~~~l~~~~g~i~~Lv~ll~~~~~~~~~~~~a~~~L~~L~~~~~~~~~~l~~~g~i 548 (813)
+++..++..+++++.+++ .++...+..+.+.|++
T Consensus 285 ~~~~~v~~~al~aL~nl~----------------------------------------------~~~~~~~~~i~~~g~l 318 (510)
T 3ul1_B 285 ATELPIVTPALRAIGNIV----------------------------------------------TGTDEQTQKVIDAGAL 318 (510)
T ss_dssp CSCHHHHHHHHHHHHHHT----------------------------------------------TSCHHHHHHHHHTTGG
T ss_pred CCCHHHHHHHHHHHHHHH----------------------------------------------CCCHHHHHHHHHCCCH
T ss_conf 887134268899998862----------------------------------------------3778888887612412
Q ss_pred HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHH
Q ss_conf 99999963200366667765403367699999988156899917999999738358999998207924899999999864
Q 003530 549 GLIFSRVKSIQLGETRGSRFVTPFLEGLLSVLARVTFVLSDEPDAIALCCEHNLAALFIELLQSNGLDKVQMVSATALEN 628 (813)
Q Consensus 549 ~~L~~lL~~~~~~~~~~~~~~~~~~e~a~~aL~~l~~~l~~~~~~~~~~~~~~~i~~L~~lL~~~~~~~vk~~Aa~aL~~ 628 (813)
+.|+.+|.+ ....+++.++++|.+++.. ++.....+.+.|++|.|+.++.++ +..+|..|+++|+|
T Consensus 319 ~~L~~LL~~----------~~~~v~~~A~~aL~nl~a~---~~~~~~~v~~~g~i~~Lv~lL~~~-~~~v~~~Aa~aL~N 384 (510)
T 3ul1_B 319 AVFPSLLTN----------PKTNIQKEATWTMSNITAG---RQDQIQQVVNHGLVPFLVGVLSKA-DFKTQKEAAWAITN 384 (510)
T ss_dssp GGCC-CTTC----------SSHHHHHHHHHHHHHHTTS---CHHHHHHHHHTTHHHHHHHHHHSS-CHHHHHHHHHHHHH
T ss_pred HHHHHHHCC----------CCHHHHHHHHHHHHHHHCC---CHHHHHHHHHCCCHHHHHHHHCCC-CHHHHHHHHHHHHH
T ss_conf 788887249----------9889999999999999708---498999988538788999997389-88999999999999
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHCCCCHHHHHHHHHHH
Q ss_conf 30003345678888998887664432345898878774456644766531323033328899740468556899999988
Q 003530 629 LSLESKNLTKLPELPPSGFCASIFPCFSKQPVITGLCRLHRGLCSLKETFCLLEGHAVEKLIALLDHTNEKVVEASLAAL 708 (813)
Q Consensus 629 ls~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gai~~Lv~lL~~~~~~v~~~A~~aL 708 (813)
++.++.. .....+++.|++++|+++|.+.|..++..++.+|
T Consensus 385 l~~~~~~---------------------------------------~~~~~L~~~g~i~~L~~LL~~~d~~i~~~~L~aL 425 (510)
T 3ul1_B 385 YTSGGTV---------------------------------------EQIVYLVHCGIIEPLMNLLSAKDTKIIQVILDAI 425 (510)
T ss_dssp HHHHCCH---------------------------------------HHHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHH
T ss_pred HHCCCCH---------------------------------------HHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf 8706999---------------------------------------9999999797899999986699999999999999
Q ss_pred HHHHHCCC---CHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHH
Q ss_conf 76530585---3135789988605908999997321976799999999999871022
Q 003530 709 STVIDDGV---DIEQGVMVLCEAQGIKPILDVLLEKRTENLQRRAVWVVERILRTDD 762 (813)
Q Consensus 709 ~~L~~~~~---~~~~~~~~i~~~~~i~~L~~ll~~~~~~~~~~~a~~aL~~i~~~~~ 762 (813)
.++..-.. ...+....+.++||++.|-.+. .+.+.+++++|..+|+++|..++
T Consensus 426 ~nil~~~~~~~~~~~~~~~iee~ggl~~ie~Lq-~~~n~~i~~~A~~iie~yf~~~~ 481 (510)
T 3ul1_B 426 SNIFQAAEKLGETEKLSIMIEECGGLDKIEALQ-RHENESVYKASLNLIEKYFSVEE 481 (510)
T ss_dssp HHHHHHHHTTTCHHHHHHHHHHTTHHHHHHHGG-GCSSHHHHHHHHHHHHHHCC---
T ss_pred HHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHH-CCCCHHHHHHHHHHHHHHCCCCC
T ss_conf 999998574266589999999868599999987-59989999999999999779853
No 10
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=1.00 E-value=1 Score=324.37 Aligned_cols=416 Identities=17% Similarity=0.219 Sum_probs=302.9
Q ss_pred CHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCC--CHHHHHHCCCHHHHHHHHCC-CCHHHHHHHHHHHHHHCCC-CH
Q ss_conf 46999998403689897999999999883205876--38899985991999999706-9978899999999884389-02
Q 003530 234 GAILILVGMTSSKSENLLTVEKAEKTLANLEKCEN--NVRQMAENGRLQPLLTQILE-GPQETKLSLAAFLGDLALN-SD 309 (813)
Q Consensus 234 g~i~~Lv~lL~~~s~~~~~~~~A~~~L~~Ls~~~~--~~~~i~~~g~i~~Lv~~L~~-~~~~~~~~a~~~L~~L~~~-~~ 309 (813)
..++.++..+. +++++.+..|+..++++-..+. ....+++.|+||.||++|.. .++.++..++++|++++.. .+
T Consensus 76 ~~l~~lv~~l~--s~d~~~q~~a~~~~rklLs~~~~~~i~~ii~~G~ip~Lv~lL~~~~~~~~q~~Aa~aL~nia~~~~~ 153 (529)
T 3tpo_A 76 WSVEDIVKGIN--SNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSE 153 (529)
T ss_dssp CCHHHHHHHHT--SSCHHHHHHHHHHHHHHHTSSSCCCHHHHHHTTHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTSCHH
T ss_pred HHHHHHHHHHC--CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHH
T ss_conf 89999999856--9999999999999999872789844999998889999999876899899999999999999749999
Q ss_pred HHHHHHHHH-HHHHHHHHHCCCHHHHHHHHHHHHHHHCC-CCCHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHH
Q ss_conf 499999624-99999997259999999999999995089-6107999972995999999800189999923799999999
Q 003530 310 VKVLVARTV-GSCLINIMKSGNMQAREAALKALNQISSC-EPSAKVLIHAGILPPLVKDLFTVGSNHLPMRLKEVSATIL 387 (813)
Q Consensus 310 ~~~~i~~~g-i~~Lv~lL~~~~~~~~~~a~~aL~~Ls~~-~~~~~~i~~~g~i~~Lv~lL~~~~~~~~~~~~~~~a~~~L 387 (813)
.+..+.+.| +|.|+++|.+++..+++.|+++|+||+.. ++++..+++.|++++|+.++.............+.++++|
T Consensus 154 ~~~~vv~~Gaip~Lv~LL~s~~~~v~e~A~~aL~nLa~~~~~~r~~i~~~g~i~~Ll~lL~~~~~~~~~~~~~~~a~~~L 233 (529)
T 3tpo_A 154 QTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGAGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTL 233 (529)
T ss_dssp HHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHTTCSSCGGGSCHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf 99999988889999998769998999999999998744688999999873872789998732440376899999999999
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHH
Q ss_conf 99970699876544489975221130299999732179968999999999980069972289999999469879999865
Q 003530 388 ANVVNSGHDFDSITVGPDNQTLVSEDIVHNLLHLISNTGPTIECKLLQVLVGLTSSPTTVLSVVSAIKSSGATISLVQFV 467 (813)
Q Consensus 388 ~nL~~~~~~~~~~~~~~~~~~l~~~~~i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~i~~~g~i~~Lv~lL 467 (813)
+|++.+...... .....+++|.|+.++.+.+++++..++++|.+++..+. +....+.+.|
T Consensus 234 ~nl~~~~~~~~~--------~~~~~~~lp~L~~LL~~~~~~v~~~a~~aL~~l~~~~~---~~~~~v~~~g--------- 293 (529)
T 3tpo_A 234 SNLCRNKNPAPP--------LDAVEQILPTLVRLLHHNDPEVLADSCWAISYLTDGPN---ERIEMVVKKG--------- 293 (529)
T ss_dssp HHHHCCCTTCCC--------HHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHSSCH---HHHHHHHTTT---------
T ss_pred HHHHHCCCCHHH--------HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH---HHHHHHHHCC---------
T ss_conf 998741321136--------99986489999999559968899999999998652000---5678999636---------
Q ss_pred HCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCC
Q ss_conf 07992799999999998188887788999730203399898741048877399999999972178899788999982695
Q 003530 468 EAPQNDLRLASIELIQNLSPHMGHELADALRGAVGQLGSLIRVISENVGISKEQAAAVGLLAELPERDLGLTRQMLDEGA 547 (813)
Q Consensus 468 ~~~~~~v~~~A~~~L~~Ls~~~~~~~~~~l~~~~g~i~~Lv~ll~~~~~~~~~~~~a~~~L~~L~~~~~~~~~~l~~~g~ 547 (813)
+++.|+.++.+++. .++..++.+|+|+..++...+..+.+.|+
T Consensus 294 -----------------------------------~i~~Lv~lL~~~~~--~v~~~a~~aL~nl~~~~~~~~~~i~~~g~ 336 (529)
T 3tpo_A 294 -----------------------------------VVPQLVKLLGATEL--PIVTPALRAIGNIVTGTDEQTQKVIDAGA 336 (529)
T ss_dssp -----------------------------------CHHHHHHHHTCSCH--HHHHHHHHHHHHHTTSCHHHHHHHHHTTG
T ss_pred -----------------------------------CHHHHHHHHCCCCH--HHHHHHHHHHHHHHCCCHHHHHHHHHCCC
T ss_conf -----------------------------------02889988618970--47788999999997164687788760242
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHH
Q ss_conf 79999996320036666776540336769999998815689991799999973835899999820792489999999986
Q 003530 548 FGLIFSRVKSIQLGETRGSRFVTPFLEGLLSVLARVTFVLSDEPDAIALCCEHNLAALFIELLQSNGLDKVQMVSATALE 627 (813)
Q Consensus 548 i~~L~~lL~~~~~~~~~~~~~~~~~~e~a~~aL~~l~~~l~~~~~~~~~~~~~~~i~~L~~lL~~~~~~~vk~~Aa~aL~ 627 (813)
++.|+.+|.+ ....+++.++++|.+++.. ++.....+.+.|++|.|+.++.++ +..++..|+++|+
T Consensus 337 l~~L~~LL~~----------~~~~i~~~a~~aL~nl~~~---~~~~~~~v~~~g~i~~Lv~lL~~~-~~~v~~~A~~aL~ 402 (529)
T 3tpo_A 337 LAVFPSLLTN----------PKTNIQKEATWTMSNITAG---RQDQIQQVVNHGLVPFLVGVLSKA-DFKTQKAAAWAIT 402 (529)
T ss_dssp GGGHHHHTTC----------SSHHHHHHHHHHHHHHHTS---CHHHHHHHHHTTHHHHHHHHHHSS-CHHHHHHHHHHHH
T ss_pred HHHHHHHHCC----------CCHHHHHHHHHHHHHHHCC---CHHHHHHHHHCCCHHHHHHHHCCC-CHHHHHHHHHHHH
T ss_conf 7899999809----------9888989999999998616---388888999658379999985699-9999999999999
Q ss_pred HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHCCCCHHHHHHHHHH
Q ss_conf 43000334567888899888766443234589887877445664476653132303332889974046855689999998
Q 003530 628 NLSLESKNLTKLPELPPSGFCASIFPCFSKQPVITGLCRLHRGLCSLKETFCLLEGHAVEKLIALLDHTNEKVVEASLAA 707 (813)
Q Consensus 628 ~ls~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gai~~Lv~lL~~~~~~v~~~A~~a 707 (813)
|++.++.. .....+++.|+|++|+++|.+.|.+++..++.+
T Consensus 403 nl~~~~~~---------------------------------------~~~~~l~~~g~i~~L~~LL~~~d~~i~~~~L~a 443 (529)
T 3tpo_A 403 NYTSGGTV---------------------------------------EQIVYLVHCGIIEPLMNLLSAKDTKIIQVILDA 443 (529)
T ss_dssp HHHHHSCH---------------------------------------HHHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHH
T ss_pred HHHCCCCH---------------------------------------HHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHH
T ss_conf 99818999---------------------------------------999999989689999998669999999999999
Q ss_pred HHHHHHCCC---CHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHH
Q ss_conf 876530585---3135789988605908999997321976799999999999871022
Q 003530 708 LSTVIDDGV---DIEQGVMVLCEAQGIKPILDVLLEKRTENLQRRAVWVVERILRTDD 762 (813)
Q Consensus 708 L~~L~~~~~---~~~~~~~~i~~~~~i~~L~~ll~~~~~~~~~~~a~~aL~~i~~~~~ 762 (813)
|.++..-.. ...+....+.++||++.|-.+. .+.+.+++++|..+|+++|..++
T Consensus 444 L~nil~~~~~~~~~~~~~~~iee~ggl~~ie~Lq-~~~n~~i~~~A~~iie~yf~~~~ 500 (529)
T 3tpo_A 444 ISNIFQAAEKLGETEKLSIMIEECGGLDKIEALQ-RHENESVYKASLNLIEKYFSVEE 500 (529)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHTTCHHHHTGGG-GCSSHHHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHH-CCCCHHHHHHHHHHHHHHCCCCC
T ss_conf 9999998686267689999999877499999987-49999999999999999779854
Done!